Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-09_18.02.32 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "f6d15d97a13346bc54dffea6402fbe17",
"name": "M1_20170518_1750_dsRNA_I5_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "16:02:57"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10000 (max 10001) in
'10000'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 27.3124
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.93281e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 1 mean_circ: 0.931047
Ran for 1050 frames Cell Events: 42 mean_circ: 0.925367
Ran for 2050 frames Cell Events: 88 mean_circ: 0.936543
Ran for 2550 frames Cell Events: 104 mean_circ: 0.940191
Ran for 3050 frames Cell Events: 121 mean_circ: 0.941175
Ran for 3550 frames Cell Events: 135 mean_circ: 0.942913
Ran for 4550 frames Cell Events: 161 mean_circ: 0.943269
Ran for 6050 frames Cell Events: 201 mean_circ: 0.944566
Ran for 6550 frames Cell Events: 221 mean_circ: 0.944392
Ran for 7050 frames Cell Events: 235 mean_circ: 0.943867
Ran for 7550 frames Cell Events: 244 mean_circ: 0.94505
Ran for 8050 frames Cell Events: 260 mean_circ: 0.945218
Ran for 8550 frames Cell Events: 279 mean_circ: 0.945168
Ran for 9550 frames Cell Events: 309 mean_circ: 0.946803
Ran for 11050 frames Cell Events: 375 mean_circ: 0.946086
Ran for 11550 frames Cell Events: 388 mean_circ: 0.946286
Ran for 12050 frames Cell Events: 408 mean_circ: 0.946555
Ran for 13050 frames Cell Events: 441 mean_circ: 0.946965
Ran for 13550 frames Cell Events: 461 mean_circ: 0.946844
Ran for 14050 frames Cell Events: 469 mean_circ: 0.947433
Ran for 14550 frames Cell Events: 487 mean_circ: 0.947481
Ran for 15050 frames Cell Events: 509 mean_circ: 0.947204
Ran for 15550 frames Cell Events: 529 mean_circ: 0.9475
Ran for 16050 frames Cell Events: 539 mean_circ: 0.94728
Ran for 17050 frames Cell Events: 556 mean_circ: 0.947034
Ran for 18550 frames Cell Events: 620 mean_circ: 0.947689
Ran for 19050 frames Cell Events: 644 mean_circ: 0.947406
Ran for 19550 frames Cell Events: 660 mean_circ: 0.946966
Ran for 20050 frames Cell Events: 684 mean_circ: 0.94732
Ran for 20550 frames Cell Events: 708 mean_circ: 0.947481
Ran for 21050 frames Cell Events: 719 mean_circ: 0.947427
Ran for 21550 frames Cell Events: 739 mean_circ: 0.947778
Ran for 22050 frames Cell Events: 754 mean_circ: 0.947643
Ran for 22550 frames Cell Events: 765 mean_circ: 0.947822
Ran for 23050 frames Cell Events: 779 mean_circ: 0.947781
Ran for 23550 frames Cell Events: 799 mean_circ: 0.948146
Ran for 24550 frames Cell Events: 831 mean_circ: 0.948192
Ran for 25550 frames Cell Events: 863 mean_circ: 0.947675
Ran for 26050 frames Cell Events: 878 mean_circ: 0.947753
Ran for 27550 frames Cell Events: 929 mean_circ: 0.947551
Ran for 28050 frames Cell Events: 942 mean_circ: 0.947567
Ran for 28550 frames Cell Events: 957 mean_circ: 0.9474
Ran for 29050 frames Cell Events: 979 mean_circ: 0.947579
Ran for 29550 frames Cell Events: 996 mean_circ: 0.947686
Ran for 30050 frames Cell Events: 1004 mean_circ: 0.947733
Ran for 30550 frames Cell Events: 1020 mean_circ: 0.947741
Ran for 31050 frames Cell Events: 1046 mean_circ: 0.947729
Ran for 32050 frames Cell Events: 1095 mean_circ: 0.94782
Ran for 32550 frames Cell Events: 1114 mean_circ: 0.947702
Ran for 33050 frames Cell Events: 1132 mean_circ: 0.947953
Ran for 34050 frames Cell Events: 1164 mean_circ: 0.947904
Ran for 34550 frames Cell Events: 1172 mean_circ: 0.947792
Ran for 35050 frames Cell Events: 1188 mean_circ: 0.947914
Ran for 35550 frames Cell Events: 1211 mean_circ: 0.947941
Ran for 36050 frames Cell Events: 1227 mean_circ: 0.947881
Ran for 36550 frames Cell Events: 1248 mean_circ: 0.947887
Ran for 37550 frames Cell Events: 1284 mean_circ: 0.947747
Ran for 38550 frames Cell Events: 1328 mean_circ: 0.947731
Ran for 39550 frames Cell Events: 1368 mean_circ: 0.947746
Ran for 40550 frames Cell Events: 1398 mean_circ: 0.947869
Ran for 41050 frames Cell Events: 1412 mean_circ: 0.947926
Ran for 41550 frames Cell Events: 1434 mean_circ: 0.947992
Ran for 42050 frames Cell Events: 1452 mean_circ: 0.947842
Ran for 42550 frames Cell Events: 1465 mean_circ: 0.947821
Ran for 43050 frames Cell Events: 1479 mean_circ: 0.947946
Ran for 43550 frames Cell Events: 1489 mean_circ: 0.948008
Ran for 44050 frames Cell Events: 1513 mean_circ: 0.94787
Ran for 44550 frames Cell Events: 1528 mean_circ: 0.947964
Ran for 45050 frames Cell Events: 1555 mean_circ: 0.948054
Ran for 45550 frames Cell Events: 1564 mean_circ: 0.94785
Ran for 46050 frames Cell Events: 1576 mean_circ: 0.947932
Ran for 47050 frames Cell Events: 1620 mean_circ: 0.947725
Ran for 49050 frames Cell Events: 1689 mean_circ: 0.947745
Ran for 49550 frames Cell Events: 1708 mean_circ: 0.94765
Ran for 50050 frames Cell Events: 1722 mean_circ: 0.947621
Ran for 50550 frames Cell Events: 1744 mean_circ: 0.947545
Ran for 52050 frames Cell Events: 1801 mean_circ: 0.947757
Ran for 52550 frames Cell Events: 1819 mean_circ: 0.947875
Ran for 53050 frames Cell Events: 1831 mean_circ: 0.947867
Ran for 54050 frames Cell Events: 1873 mean_circ: 0.947856
Ran for 56050 frames Cell Events: 1961 mean_circ: 0.947789
Ran for 56550 frames Cell Events: 1968 mean_circ: 0.947897
Ran for 57050 frames Cell Events: 1990 mean_circ: 0.947841
Ran for 57550 frames Cell Events: 2007 mean_circ: 0.947735
Ran for 58050 frames Cell Events: 2025 mean_circ: 0.947724
Ran for 58550 frames Cell Events: 2037 mean_circ: 0.947834
Ran for 59050 frames Cell Events: 2052 mean_circ: 0.947842
Ran for 59550 frames Cell Events: 2071 mean_circ: 0.947866
Ran for 60050 frames Cell Events: 2092 mean_circ: 0.947911
Ran for 60550 frames Cell Events: 2114 mean_circ: 0.947832
Ran for 61050 frames Cell Events: 2128 mean_circ: 0.947932
Ran for 61550 frames Cell Events: 2149 mean_circ: 0.94802
Ran for 62050 frames Cell Events: 2170 mean_circ: 0.948
Ran for 62550 frames Cell Events: 2182 mean_circ: 0.948027
Ran for 63050 frames Cell Events: 2196 mean_circ: 0.948023
Ran for 64050 frames Cell Events: 2220 mean_circ: 0.947918
Ran for 64550 frames Cell Events: 2234 mean_circ: 0.947933
Ran for 65050 frames Cell Events: 2247 mean_circ: 0.94797
Ran for 66050 frames Cell Events: 2289 mean_circ: 0.947839
Ran for 66550 frames Cell Events: 2303 mean_circ: 0.947877
Ran for 67050 frames Cell Events: 2324 mean_circ: 0.947879
Ran for 68550 frames Cell Events: 2372 mean_circ: 0.947961
Ran for 69050 frames Cell Events: 2393 mean_circ: 0.948018
Ran for 69550 frames Cell Events: 2415 mean_circ: 0.948056
Ran for 70550 frames Cell Events: 2447 mean_circ: 0.948074
Ran for 71550 frames Cell Events: 2488 mean_circ: 0.948117
Ran for 72050 frames Cell Events: 2516 mean_circ: 0.948129
Ran for 72550 frames Cell Events: 2541 mean_circ: 0.948194
Ran for 73050 frames Cell Events: 2554 mean_circ: 0.948333
Ran for 74050 frames Cell Events: 2581 mean_circ: 0.948404
Ran for 74550 frames Cell Events: 2596 mean_circ: 0.948366
Ran for 75550 frames Cell Events: 2638 mean_circ: 0.948265
Ran for 76050 frames Cell Events: 2652 mean_circ: 0.948141
Ran for 76550 frames Cell Events: 2669 mean_circ: 0.948122
Ran for 77050 frames Cell Events: 2683 mean_circ: 0.948133
Ran for 78550 frames Cell Events: 2737 mean_circ: 0.948189
Ran for 79050 frames Cell Events: 2751 mean_circ: 0.948206
Ran for 79550 frames Cell Events: 2772 mean_circ: 0.948232
Ran for 80050 frames Cell Events: 2780 mean_circ: 0.948229
Ran for 81550 frames Cell Events: 2836 mean_circ: 0.948149
Ran for 82050 frames Cell Events: 2866 mean_circ: 0.948166
Ran for 82550 frames Cell Events: 2885 mean_circ: 0.948203
Ran for 83050 frames Cell Events: 2909 mean_circ: 0.948218
Ran for 83550 frames Cell Events: 2926 mean_circ: 0.948198
Ran for 84050 frames Cell Events: 2946 mean_circ: 0.948084
Ran for 84550 frames Cell Events: 2960 mean_circ: 0.948107
Ran for 85050 frames Cell Events: 2975 mean_circ: 0.948111
Ran for 86550 frames Cell Events: 3024 mean_circ: 0.948015
Ran for 87050 frames Cell Events: 3037 mean_circ: 0.948064
Ran for 87550 frames Cell Events: 3051 mean_circ: 0.94814
Ran for 88550 frames Cell Events: 3089 mean_circ: 0.948223
Ran for 89050 frames Cell Events: 3104 mean_circ: 0.948225
Ran for 89550 frames Cell Events: 3117 mean_circ: 0.948248
Ran for 90050 frames Cell Events: 3145 mean_circ: 0.94827
Ran for 90550 frames Cell Events: 3160 mean_circ: 0.948323
Ran for 91550 frames Cell Events: 3204 mean_circ: 0.948222
Ran for 92050 frames Cell Events: 3218 mean_circ: 0.948123
Ran for 92550 frames Cell Events: 3226 mean_circ: 0.948146
Ran for 93050 frames Cell Events: 3250 mean_circ: 0.948205
Ran for 93550 frames Cell Events: 3268 mean_circ: 0.948192
Ran for 94050 frames Cell Events: 3288 mean_circ: 0.948229
Ran for 94550 frames Cell Events: 3310 mean_circ: 0.948247
Ran for 95050 frames Cell Events: 3322 mean_circ: 0.948254
Ran for 96050 frames Cell Events: 3328 mean_circ: 0.948276
Ran for 97050 frames Cell Events: 3363 mean_circ: 0.948324
Ran for 97550 frames Cell Events: 3376 mean_circ: 0.94833
Ran for 98050 frames Cell Events: 3396 mean_circ: 0.948315
Ran for 99550 frames Cell Events: 3450 mean_circ: 0.948198
Ran for 100050 frames Cell Events: 3468 mean_circ: 0.948203
Ran for 100550 frames Cell Events: 3487 mean_circ: 0.948235
Ran for 101550 frames Cell Events: 3522 mean_circ: 0.948255
Ran for 102050 frames Cell Events: 3540 mean_circ: 0.948201
Ran for 102550 frames Cell Events: 3561 mean_circ: 0.948209
Ran for 103050 frames Cell Events: 3566 mean_circ: 0.94824
Ran for 104550 frames Cell Events: 3614 mean_circ: 0.948147
Ran for 105050 frames Cell Events: 3633 mean_circ: 0.948212
Ran for 105550 frames Cell Events: 3648 mean_circ: 0.948284
Ran for 106550 frames Cell Events: 3678 mean_circ: 0.948258
Ran for 107550 frames Cell Events: 3737 mean_circ: 0.948072
Ran for 108050 frames Cell Events: 3759 mean_circ: 0.948091
Ran for 109050 frames Cell Events: 3790 mean_circ: 0.948092
Ran for 109550 frames Cell Events: 3802 mean_circ: 0.948059
Ran for 110050 frames Cell Events: 3810 mean_circ: 0.948078
Ran for 110550 frames Cell Events: 3831 mean_circ: 0.948123
Ran for 111050 frames Cell Events: 3854 mean_circ: 0.948104
Ran for 111550 frames Cell Events: 3867 mean_circ: 0.948147
Ran for 112550 frames Cell Events: 3894 mean_circ: 0.948229
Ran for 113050 frames Cell Events: 3911 mean_circ: 0.94828
Ran for 114050 frames Cell Events: 3956 mean_circ: 0.948348
Ran for 114550 frames Cell Events: 3972 mean_circ: 0.94834
Ran for 115050 frames Cell Events: 3984 mean_circ: 0.948287
Ran for 115550 frames Cell Events: 4006 mean_circ: 0.948326
Ran for 116050 frames Cell Events: 4019 mean_circ: 0.948344
Ran for 116550 frames Cell Events: 4033 mean_circ: 0.948379
Ran for 117050 frames Cell Events: 4054 mean_circ: 0.948428
Ran for 117550 frames Cell Events: 4082 mean_circ: 0.948452
Ran for 119050 frames Cell Events: 4154 mean_circ: 0.948425
Ran for 120050 frames Cell Events: 4185 mean_circ: 0.948414
Ran for 120550 frames Cell Events: 4212 mean_circ: 0.948439
Ran for 121550 frames Cell Events: 4237 mean_circ: 0.948422
Ran for 122050 frames Cell Events: 4253 mean_circ: 0.948438
Ran for 122550 frames Cell Events: 4266 mean_circ: 0.948475
Ran for 123050 frames Cell Events: 4283 mean_circ: 0.948441
Ran for 123550 frames Cell Events: 4297 mean_circ: 0.948427
Ran for 124050 frames Cell Events: 4309 mean_circ: 0.948418
Ran for 124550 frames Cell Events: 4326 mean_circ: 0.948432
Ran for 126050 frames Cell Events: 4393 mean_circ: 0.948354
Ran for 126550 frames Cell Events: 4413 mean_circ: 0.948362
Ran for 127050 frames Cell Events: 4427 mean_circ: 0.948332
Ran for 127550 frames Cell Events: 4444 mean_circ: 0.948294
Ran for 128050 frames Cell Events: 4462 mean_circ: 0.948299
Ran for 129050 frames Cell Events: 4501 mean_circ: 0.948405
Ran for 129550 frames Cell Events: 4520 mean_circ: 0.94845
Ran for 130050 frames Cell Events: 4534 mean_circ: 0.948441
Ran for 130550 frames Cell Events: 4548 mean_circ: 0.948477
Ran for 131050 frames Cell Events: 4571 mean_circ: 0.948489
Ran for 133050 frames Cell Events: 4673 mean_circ: 0.94856
Ran for 133550 frames Cell Events: 4702 mean_circ: 0.948501
Ran for 134050 frames Cell Events: 4712 mean_circ: 0.948492
Ran for 135050 frames Cell Events: 4747 mean_circ: 0.948475
Ran for 135550 frames Cell Events: 4759 mean_circ: 0.948448
Ran for 136050 frames Cell Events: 4776 mean_circ: 0.948415
Ran for 136550 frames Cell Events: 4799 mean_circ: 0.948394
Ran for 138050 frames Cell Events: 4852 mean_circ: 0.948422
Ran for 138550 frames Cell Events: 4866 mean_circ: 0.948373
Ran for 139050 frames Cell Events: 4876 mean_circ: 0.948371
Ran for 140050 frames Cell Events: 4908 mean_circ: 0.948386
Ran for 140550 frames Cell Events: 4926 mean_circ: 0.948404
Ran for 141050 frames Cell Events: 4939 mean_circ: 0.948421
Ran for 141550 frames Cell Events: 4958 mean_circ: 0.94842
Ran for 142050 frames Cell Events: 4970 mean_circ: 0.948453
Ran for 142550 frames Cell Events: 4990 mean_circ: 0.948436
Ran for 143050 frames Cell Events: 5008 mean_circ: 0.948435
Ran for 144050 frames Cell Events: 5045 mean_circ: 0.948485
Ran for 144550 frames Cell Events: 5065 mean_circ: 0.948441
Ran for 145550 frames Cell Events: 5104 mean_circ: 0.948397
Ran for 146050 frames Cell Events: 5124 mean_circ: 0.948411
Ran for 146550 frames Cell Events: 5147 mean_circ: 0.94845
Ran for 147050 frames Cell Events: 5169 mean_circ: 0.948414
Ran for 148050 frames Cell Events: 5200 mean_circ: 0.948381
Ran for 148550 frames Cell Events: 5220 mean_circ: 0.948357
Ran for 149050 frames Cell Events: 5242 mean_circ: 0.948359
Ran for 149550 frames Cell Events: 5268 mean_circ: 0.948307
Ran for 150050 frames Cell Events: 5278 mean_circ: 0.948344
Ran for 150550 frames Cell Events: 5288 mean_circ: 0.948329
Ran for 151050 frames Cell Events: 5315 mean_circ: 0.948284
Ran for 152550 frames Cell Events: 5368 mean_circ: 0.948361
Ran for 153050 frames Cell Events: 5381 mean_circ: 0.948383
Ran for 153550 frames Cell Events: 5399 mean_circ: 0.948382
Ran for 154550 frames Cell Events: 5435 mean_circ: 0.948374
Ran for 155550 frames Cell Events: 5466 mean_circ: 0.948352
Ran for 156050 frames Cell Events: 5481 mean_circ: 0.948361
Ran for 156550 frames Cell Events: 5502 mean_circ: 0.948321
Ran for 157050 frames Cell Events: 5520 mean_circ: 0.948297
Ran for 157550 frames Cell Events: 5540 mean_circ: 0.948334
Ran for 158550 frames Cell Events: 5578 mean_circ: 0.94827
Ran for 159050 frames Cell Events: 5599 mean_circ: 0.948299
Ran for 159550 frames Cell Events: 5618 mean_circ: 0.948318
Ran for 160050 frames Cell Events: 5635 mean_circ: 0.94835
Ran for 160550 frames Cell Events: 5671 mean_circ: 0.948233
Ran for 161050 frames Cell Events: 5690 mean_circ: 0.948233
Ran for 162050 frames Cell Events: 5727 mean_circ: 0.948173
Ran for 162550 frames Cell Events: 5739 mean_circ: 0.948178
Ran for 163050 frames Cell Events: 5761 mean_circ: 0.948166
Ran for 163550 frames Cell Events: 5783 mean_circ: 0.948188
Ran for 165050 frames Cell Events: 5827 mean_circ: 0.94822
Ran for 165550 frames Cell Events: 5839 mean_circ: 0.948178
Ran for 166050 frames Cell Events: 5857 mean_circ: 0.948214
Ran for 167050 frames Cell Events: 5900 mean_circ: 0.948146
Ran for 167550 frames Cell Events: 5926 mean_circ: 0.948183
Ran for 168550 frames Cell Events: 5954 mean_circ: 0.94816
Ran for 169050 frames Cell Events: 5971 mean_circ: 0.94816
Ran for 169550 frames Cell Events: 5989 mean_circ: 0.948158
Ran for 170050 frames Cell Events: 6008 mean_circ: 0.948151
Ran for 171050 frames Cell Events: 6046 mean_circ: 0.948203
Ran for 171550 frames Cell Events: 6062 mean_circ: 0.948234
Ran for 172550 frames Cell Events: 6089 mean_circ: 0.948281
Ran for 173050 frames Cell Events: 6114 mean_circ: 0.948299
Ran for 173550 frames Cell Events: 6139 mean_circ: 0.948303
Ran for 174050 frames Cell Events: 6161 mean_circ: 0.94827
Ran for 174550 frames Cell Events: 6181 mean_circ: 0.948255
Ran for 176050 frames Cell Events: 6236 mean_circ: 0.948324
Ran for 176550 frames Cell Events: 6255 mean_circ: 0.948272
Ran for 177050 frames Cell Events: 6276 mean_circ: 0.948261
Ran for 177550 frames Cell Events: 6296 mean_circ: 0.948175
Ran for 178050 frames Cell Events: 6309 mean_circ: 0.948165
Ran for 179050 frames Cell Events: 6367 mean_circ: 0.948022
Ran for 180050 frames Cell Events: 6430 mean_circ: 0.947948
Ran for 180550 frames Cell Events: 6455 mean_circ: 0.947968
Ran for 182050 frames Cell Events: 6529 mean_circ: 0.947927
Ran for 182550 frames Cell Events: 6539 mean_circ: 0.947949
Ran for 183050 frames Cell Events: 6545 mean_circ: 0.947914
Ran for 184550 frames Cell Events: 6612 mean_circ: 0.947936
Ran for 185050 frames Cell Events: 6632 mean_circ: 0.947915
Ran for 186050 frames Cell Events: 6666 mean_circ: 0.947902
Ran for 186550 frames Cell Events: 6691 mean_circ: 0.947906
Ran for 187550 frames Cell Events: 6747 mean_circ: 0.947911
Ran for 188050 frames Cell Events: 6770 mean_circ: 0.947901
Ran for 188550 frames Cell Events: 6794 mean_circ: 0.947893
Ran for 190050 frames Cell Events: 6866 mean_circ: 0.947805
Ran for 190550 frames Cell Events: 6888 mean_circ: 0.947826
Ran for 191050 frames Cell Events: 6910 mean_circ: 0.947801
Ran for 191550 frames Cell Events: 6928 mean_circ: 0.947772
Ran for 192050 frames Cell Events: 6952 mean_circ: 0.947791
Ran for 193050 frames Cell Events: 6989 mean_circ: 0.947834
Ran for 193550 frames Cell Events: 7007 mean_circ: 0.947805
Ran for 194050 frames Cell Events: 7031 mean_circ: 0.947827
Ran for 194550 frames Cell Events: 7038 mean_circ: 0.947797
Ran for 195550 frames Cell Events: 7084 mean_circ: 0.947851
Ran for 196050 frames Cell Events: 7107 mean_circ: 0.947851
Ran for 198550 frames Cell Events: 7202 mean_circ: 0.947821
Ran for 199050 frames Cell Events: 7222 mean_circ: 0.947834
Ran for 199550 frames Cell Events: 7241 mean_circ: 0.947858
Ran for 200050 frames Cell Events: 7259 mean_circ: 0.947836
Ran for 200550 frames Cell Events: 7278 mean_circ: 0.947844
Ran for 202050 frames Cell Events: 7344 mean_circ: 0.947872
Ran for 202550 frames Cell Events: 7364 mean_circ: 0.947838
Ran for 203550 frames Cell Events: 7398 mean_circ: 0.947834
Ran for 204050 frames Cell Events: 7417 mean_circ: 0.947848
Ran for 204550 frames Cell Events: 7444 mean_circ: 0.94789
Ran for 205050 frames Cell Events: 7464 mean_circ: 0.947938
Ran for 205550 frames Cell Events: 7479 mean_circ: 0.947948
Ran for 206050 frames Cell Events: 7510 mean_circ: 0.947964
Ran for 206550 frames Cell Events: 7532 mean_circ: 0.947947
Ran for 207050 frames Cell Events: 7549 mean_circ: 0.947969
Ran for 208050 frames Cell Events: 7598 mean_circ: 0.948045
Ran for 208550 frames Cell Events: 7617 mean_circ: 0.948066
Ran for 209050 frames Cell Events: 7627 mean_circ: 0.948043
Ran for 209550 frames Cell Events: 7640 mean_circ: 0.948023
Ran for 210550 frames Cell Events: 7682 mean_circ: 0.94796
Ran for 211050 frames Cell Events: 7703 mean_circ: 0.947924
Ran for 211550 frames Cell Events: 7723 mean_circ: 0.947958
Ran for 212050 frames Cell Events: 7738 mean_circ: 0.947992
Ran for 212550 frames Cell Events: 7757 mean_circ: 0.948
Ran for 214050 frames Cell Events: 7810 mean_circ: 0.948007
Ran for 214550 frames Cell Events: 7828 mean_circ: 0.948015
Ran for 215550 frames Cell Events: 7872 mean_circ: 0.947989
Ran for 216050 frames Cell Events: 7885 mean_circ: 0.948004
Ran for 216550 frames Cell Events: 7902 mean_circ: 0.948025
Ran for 217050 frames Cell Events: 7920 mean_circ: 0.948044
Ran for 217550 frames Cell Events: 7940 mean_circ: 0.948037
Ran for 218050 frames Cell Events: 7968 mean_circ: 0.947996
Ran for 219050 frames Cell Events: 8023 mean_circ: 0.947957
Ran for 219550 frames Cell Events: 8041 mean_circ: 0.947962
Ran for 220050 frames Cell Events: 8056 mean_circ: 0.94798
Ran for 220550 frames Cell Events: 8086 mean_circ: 0.948
Ran for 221550 frames Cell Events: 8123 mean_circ: 0.947957
Ran for 222050 frames Cell Events: 8147 mean_circ: 0.94798
Ran for 223050 frames Cell Events: 8177 mean_circ: 0.947976
Ran for 224050 frames Cell Events: 8199 mean_circ: 0.947988
Ran for 224550 frames Cell Events: 8222 mean_circ: 0.947982
Ran for 225550 frames Cell Events: 8261 mean_circ: 0.94805
Ran for 226050 frames Cell Events: 8284 mean_circ: 0.948021
Ran for 227550 frames Cell Events: 8329 mean_circ: 0.948082
Ran for 228050 frames Cell Events: 8344 mean_circ: 0.948053
Ran for 228550 frames Cell Events: 8379 mean_circ: 0.948022
Ran for 229550 frames Cell Events: 8411 mean_circ: 0.948039
Ran for 230050 frames Cell Events: 8424 mean_circ: 0.948056
Ran for 231050 frames Cell Events: 8453 mean_circ: 0.94811
Ran for 231550 frames Cell Events: 8466 mean_circ: 0.948119
Ran for 233050 frames Cell Events: 8521 mean_circ: 0.948064
Ran for 233550 frames Cell Events: 8531 mean_circ: 0.948051
Ran for 234050 frames Cell Events: 8546 mean_circ: 0.94807
Ran for 235050 frames Cell Events: 8591 mean_circ: 0.948097
Ran for 235550 frames Cell Events: 8608 mean_circ: 0.948109
Ran for 236050 frames Cell Events: 8625 mean_circ: 0.948096
Ran for 236550 frames Cell Events: 8651 mean_circ: 0.948098
Ran for 237050 frames Cell Events: 8668 mean_circ: 0.948098
Ran for 237550 frames Cell Events: 8693 mean_circ: 0.948081
Ran for 238050 frames Cell Events: 8711 mean_circ: 0.948087
Ran for 238550 frames Cell Events: 8727 mean_circ: 0.948094
Ran for 239550 frames Cell Events: 8762 mean_circ: 0.948127
Ran for 240550 frames Cell Events: 8809 mean_circ: 0.948092
Ran for 241550 frames Cell Events: 8839 mean_circ: 0.948089
Ran for 242050 frames Cell Events: 8857 mean_circ: 0.948123
Ran for 242550 frames Cell Events: 8864 mean_circ: 0.948118
Ran for 243550 frames Cell Events: 8903 mean_circ: 0.948141
Ran for 244050 frames Cell Events: 8926 mean_circ: 0.948128
Ran for 245050 frames Cell Events: 8963 mean_circ: 0.948092
Ran for 245550 frames Cell Events: 8979 mean_circ: 0.948102
Ran for 246050 frames Cell Events: 8994 mean_circ: 0.948097
Ran for 247050 frames Cell Events: 9031 mean_circ: 0.948065
Ran for 247550 frames Cell Events: 9042 mean_circ: 0.948058
Ran for 248050 frames Cell Events: 9060 mean_circ: 0.94806
Ran for 248550 frames Cell Events: 9074 mean_circ: 0.948047
Ran for 249050 frames Cell Events: 9090 mean_circ: 0.948016
Ran for 249550 frames Cell Events: 9116 mean_circ: 0.948018
Ran for 250550 frames Cell Events: 9156 mean_circ: 0.947977
Ran for 251550 frames Cell Events: 9196 mean_circ: 0.947983
Ran for 252050 frames Cell Events: 9206 mean_circ: 0.947988
Ran for 252550 frames Cell Events: 9230 mean_circ: 0.94799
Ran for 253050 frames Cell Events: 9260 mean_circ: 0.947901
Ran for 253550 frames Cell Events: 9279 mean_circ: 0.947879
Ran for 254050 frames Cell Events: 9298 mean_circ: 0.947888
Ran for 256550 frames Cell Events: 9392 mean_circ: 0.947902
Ran for 257550 frames Cell Events: 9422 mean_circ: 0.947871
Ran for 258550 frames Cell Events: 9461 mean_circ: 0.947877
Ran for 259050 frames Cell Events: 9477 mean_circ: 0.947892
Ran for 259550 frames Cell Events: 9493 mean_circ: 0.947877
Ran for 260050 frames Cell Events: 9511 mean_circ: 0.947868
Ran for 260550 frames Cell Events: 9529 mean_circ: 0.94786
Ran for 261050 frames Cell Events: 9541 mean_circ: 0.94785
Ran for 261550 frames Cell Events: 9564 mean_circ: 0.947875
Ran for 262050 frames Cell Events: 9585 mean_circ: 0.947857
Ran for 263050 frames Cell Events: 9629 mean_circ: 0.94788
Ran for 263550 frames Cell Events: 9646 mean_circ: 0.947872
Ran for 265050 frames Cell Events: 9706 mean_circ: 0.947885
Ran for 265550 frames Cell Events: 9726 mean_circ: 0.947875
Ran for 266550 frames Cell Events: 9761 mean_circ: 0.947931
Ran for 267050 frames Cell Events: 9774 mean_circ: 0.947922
Ran for 268550 frames Cell Events: 9840 mean_circ: 0.94793
Ran for 269050 frames Cell Events: 9854 mean_circ: 0.947904
Ran for 271050 frames Cell Events: 9929 mean_circ: 0.94788
Ran for 271550 frames Cell Events: 9947 mean_circ: 0.947863
Ran for 272050 frames Cell Events: 9975 mean_circ: 0.947823



End this measurment.
because stop condition (time/nr of cells) was met

Stopping time: 2.93418e+008
****************************************
Measurement finished

Mean Circularitiy: 0.947809
Mean Area: 635.572
Mean FL-1 intensity: 3267.02
Mean FL-2 intensity: 4916.86
Mean FL-3 intensity: 0

frames processed: 271377
Total Time: 136317ms
Number of Runs (new bg img) 0
Frames collected: 272528
Skipped frames: 65073
Rescued Frames: 3541994
Samples DAQ: 68133215
Samples written: 136263920
Samples per Channel: 68131960
FPS: 1999.23

Samples per second: 499806
Expected samples/s: 500000

Events: 10001
Events per second: 73.3659
jumped back (PMT): 6230
#Frames read, frequency
# 0 frames :367211
# 1 frames :158738
# 2 frames :5878
# 3 frames :1463
# 4 frames :669
# 5 frames :236
# 6 frames :3691
# 7 frames :2423
# 8 frames :1582
# 9 frames :664
# 10 frames :462
# 11 frames :288
# 12 frames :363
# 13 frames :238
# 14 frames :285
# 15 frames :207
# 16 frames :138
# 17 frames :89
# 18 frames :65
# 19 frames :29
# 20 frames :49
# 21 frames :52
# 22 frames :39
# 23 frames :24
# 24 frames :21
# 25 frames :12
# 26 frames :12
# 27 frames :12
# 28 frames :14
# 29 frames :10
# 30 frames :7
# 31 frames :6
# 32 frames :6
# 33 frames :2
# 34 frames :3
# 36 frames :2
# 37 frames :3
# 38 frames :3
# 39 frames :1
# 40 frames :2
# 41 frames :3
# 43 frames :2
# 44 frames :1
# 46 frames :1
# 49 frames :1
# 65 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 27.3124
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0