Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-09_18.16.55 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "fdb1c959ff5a5f99a570dc3882056145",
"name": "M1_20170518_2054_dsRNA_J8_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "16:17:23"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 7997 (max 7998) in '7997'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 27.5072
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 3.04332e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 13 mean_circ: 0.895066
Ran for 1050 frames Cell Events: 36 mean_circ: 0.898279
Ran for 3550 frames Cell Events: 121 mean_circ: 0.919178
Ran for 4550 frames Cell Events: 133 mean_circ: 0.920578
Ran for 5050 frames Cell Events: 145 mean_circ: 0.921005
Ran for 5550 frames Cell Events: 160 mean_circ: 0.922601
Ran for 6050 frames Cell Events: 168 mean_circ: 0.921204
Ran for 6550 frames Cell Events: 173 mean_circ: 0.921496
Ran for 7550 frames Cell Events: 205 mean_circ: 0.921096
Ran for 9050 frames Cell Events: 248 mean_circ: 0.921862
Ran for 9550 frames Cell Events: 272 mean_circ: 0.922993
Ran for 10050 frames Cell Events: 294 mean_circ: 0.920039
Ran for 10550 frames Cell Events: 316 mean_circ: 0.921364
Ran for 11050 frames Cell Events: 334 mean_circ: 0.921289
Ran for 11550 frames Cell Events: 349 mean_circ: 0.922087
Ran for 12050 frames Cell Events: 358 mean_circ: 0.922925
Ran for 12550 frames Cell Events: 370 mean_circ: 0.923368
Ran for 13050 frames Cell Events: 379 mean_circ: 0.922926
Ran for 13550 frames Cell Events: 393 mean_circ: 0.922525
Ran for 14050 frames Cell Events: 404 mean_circ: 0.922902
Ran for 14550 frames Cell Events: 420 mean_circ: 0.923849
Ran for 15050 frames Cell Events: 431 mean_circ: 0.924234
Ran for 16050 frames Cell Events: 462 mean_circ: 0.92437
Ran for 16550 frames Cell Events: 480 mean_circ: 0.924465
Ran for 17050 frames Cell Events: 498 mean_circ: 0.923728
Ran for 17550 frames Cell Events: 509 mean_circ: 0.923456
Ran for 18050 frames Cell Events: 524 mean_circ: 0.923601
Ran for 18550 frames Cell Events: 535 mean_circ: 0.923164
Ran for 19050 frames Cell Events: 547 mean_circ: 0.923456
Ran for 19550 frames Cell Events: 561 mean_circ: 0.923294
Ran for 20050 frames Cell Events: 574 mean_circ: 0.923724
Ran for 20550 frames Cell Events: 589 mean_circ: 0.924178
Ran for 21050 frames Cell Events: 603 mean_circ: 0.924246
Ran for 21550 frames Cell Events: 626 mean_circ: 0.923759
Ran for 22050 frames Cell Events: 642 mean_circ: 0.923755
Ran for 22550 frames Cell Events: 655 mean_circ: 0.923996
Ran for 23550 frames Cell Events: 690 mean_circ: 0.924299
Ran for 24050 frames Cell Events: 709 mean_circ: 0.924029
Ran for 24550 frames Cell Events: 722 mean_circ: 0.922797
Ran for 25050 frames Cell Events: 740 mean_circ: 0.922485
Ran for 25550 frames Cell Events: 758 mean_circ: 0.921596
Ran for 26050 frames Cell Events: 768 mean_circ: 0.921362
Ran for 26550 frames Cell Events: 782 mean_circ: 0.921677
Ran for 27550 frames Cell Events: 818 mean_circ: 0.921976
Ran for 28550 frames Cell Events: 866 mean_circ: 0.922475
Ran for 29050 frames Cell Events: 883 mean_circ: 0.922446
Ran for 29550 frames Cell Events: 899 mean_circ: 0.922293
Ran for 30050 frames Cell Events: 912 mean_circ: 0.922526
Ran for 30550 frames Cell Events: 924 mean_circ: 0.922485
Ran for 31050 frames Cell Events: 943 mean_circ: 0.922731
Ran for 31550 frames Cell Events: 963 mean_circ: 0.922996
Ran for 32050 frames Cell Events: 976 mean_circ: 0.923046
Ran for 32550 frames Cell Events: 990 mean_circ: 0.923
Ran for 33050 frames Cell Events: 1010 mean_circ: 0.922822
Ran for 33550 frames Cell Events: 1024 mean_circ: 0.923037
Ran for 34050 frames Cell Events: 1043 mean_circ: 0.923437
Ran for 36050 frames Cell Events: 1102 mean_circ: 0.923213
Ran for 37050 frames Cell Events: 1136 mean_circ: 0.92344
Ran for 38050 frames Cell Events: 1176 mean_circ: 0.923826
Ran for 38550 frames Cell Events: 1189 mean_circ: 0.923934
Ran for 39550 frames Cell Events: 1226 mean_circ: 0.924366
Ran for 40050 frames Cell Events: 1243 mean_circ: 0.924598
Ran for 40550 frames Cell Events: 1261 mean_circ: 0.924588
Ran for 41050 frames Cell Events: 1277 mean_circ: 0.924679
Ran for 41550 frames Cell Events: 1292 mean_circ: 0.924668
Ran for 42050 frames Cell Events: 1314 mean_circ: 0.924717
Ran for 43550 frames Cell Events: 1372 mean_circ: 0.924616
Ran for 44050 frames Cell Events: 1398 mean_circ: 0.924908
Ran for 44550 frames Cell Events: 1411 mean_circ: 0.924915
Ran for 45050 frames Cell Events: 1430 mean_circ: 0.924946
Ran for 45550 frames Cell Events: 1439 mean_circ: 0.925069
Ran for 46050 frames Cell Events: 1462 mean_circ: 0.925075
Ran for 47050 frames Cell Events: 1502 mean_circ: 0.925211
Ran for 48050 frames Cell Events: 1538 mean_circ: 0.92527
Ran for 49050 frames Cell Events: 1565 mean_circ: 0.925369
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Ran for 50550 frames Cell Events: 1622 mean_circ: 0.925297
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Ran for 51550 frames Cell Events: 1654 mean_circ: 0.925307
Ran for 52550 frames Cell Events: 1682 mean_circ: 0.925443
Ran for 53050 frames Cell Events: 1696 mean_circ: 0.925467
Ran for 53550 frames Cell Events: 1711 mean_circ: 0.925587
Ran for 54050 frames Cell Events: 1726 mean_circ: 0.92561
Ran for 55050 frames Cell Events: 1757 mean_circ: 0.925863
Ran for 55550 frames Cell Events: 1773 mean_circ: 0.925954
Ran for 56050 frames Cell Events: 1792 mean_circ: 0.9258
Ran for 57050 frames Cell Events: 1833 mean_circ: 0.925771
Ran for 57550 frames Cell Events: 1858 mean_circ: 0.925665
Ran for 58050 frames Cell Events: 1880 mean_circ: 0.925883
Ran for 59550 frames Cell Events: 1924 mean_circ: 0.926009
Ran for 60550 frames Cell Events: 1960 mean_circ: 0.92596
Ran for 61050 frames Cell Events: 1977 mean_circ: 0.925918
Ran for 61550 frames Cell Events: 1992 mean_circ: 0.925894
Ran for 62050 frames Cell Events: 2014 mean_circ: 0.925896
Ran for 62550 frames Cell Events: 2026 mean_circ: 0.926072
Ran for 63050 frames Cell Events: 2038 mean_circ: 0.926166
Ran for 64050 frames Cell Events: 2067 mean_circ: 0.926236
Ran for 64550 frames Cell Events: 2084 mean_circ: 0.926191
Ran for 65050 frames Cell Events: 2094 mean_circ: 0.926363
Ran for 65550 frames Cell Events: 2121 mean_circ: 0.926404
Ran for 66050 frames Cell Events: 2140 mean_circ: 0.926258
Ran for 67050 frames Cell Events: 2185 mean_circ: 0.926014
Ran for 68050 frames Cell Events: 2225 mean_circ: 0.926028
Ran for 68550 frames Cell Events: 2241 mean_circ: 0.92585
Ran for 69550 frames Cell Events: 2264 mean_circ: 0.92595
Ran for 70050 frames Cell Events: 2274 mean_circ: 0.926062
Ran for 70550 frames Cell Events: 2289 mean_circ: 0.926033
Ran for 71050 frames Cell Events: 2304 mean_circ: 0.926117
Ran for 71550 frames Cell Events: 2326 mean_circ: 0.926178
Ran for 72050 frames Cell Events: 2348 mean_circ: 0.92604
Ran for 73050 frames Cell Events: 2371 mean_circ: 0.925859
Ran for 74050 frames Cell Events: 2398 mean_circ: 0.925918
Ran for 74550 frames Cell Events: 2416 mean_circ: 0.925875
Ran for 75050 frames Cell Events: 2436 mean_circ: 0.925773
Ran for 75550 frames Cell Events: 2452 mean_circ: 0.925755
Ran for 76050 frames Cell Events: 2466 mean_circ: 0.925872
Ran for 76550 frames Cell Events: 2478 mean_circ: 0.925827
Ran for 77050 frames Cell Events: 2488 mean_circ: 0.925891
Ran for 77550 frames Cell Events: 2504 mean_circ: 0.925951
Ran for 79050 frames Cell Events: 2557 mean_circ: 0.925841
Ran for 79550 frames Cell Events: 2571 mean_circ: 0.92589
Ran for 80550 frames Cell Events: 2599 mean_circ: 0.925877
Ran for 81050 frames Cell Events: 2610 mean_circ: 0.925914
Ran for 81550 frames Cell Events: 2627 mean_circ: 0.925878
Ran for 82050 frames Cell Events: 2653 mean_circ: 0.926042
Ran for 82550 frames Cell Events: 2669 mean_circ: 0.926061
Ran for 83050 frames Cell Events: 2682 mean_circ: 0.92607
Ran for 83550 frames Cell Events: 2690 mean_circ: 0.926085
Ran for 84550 frames Cell Events: 2727 mean_circ: 0.926023
Ran for 85050 frames Cell Events: 2746 mean_circ: 0.926103
Ran for 85550 frames Cell Events: 2757 mean_circ: 0.926112
Ran for 86550 frames Cell Events: 2799 mean_circ: 0.926232
Ran for 87050 frames Cell Events: 2813 mean_circ: 0.926312
Ran for 87550 frames Cell Events: 2834 mean_circ: 0.926298
Ran for 88050 frames Cell Events: 2850 mean_circ: 0.926367
Ran for 88550 frames Cell Events: 2869 mean_circ: 0.926341
Ran for 89050 frames Cell Events: 2887 mean_circ: 0.926383
Ran for 89550 frames Cell Events: 2908 mean_circ: 0.926486
Ran for 90550 frames Cell Events: 2928 mean_circ: 0.926404
Ran for 91050 frames Cell Events: 2944 mean_circ: 0.926476
Ran for 91550 frames Cell Events: 2956 mean_circ: 0.926477
Ran for 92050 frames Cell Events: 2966 mean_circ: 0.926511
Ran for 92550 frames Cell Events: 2980 mean_circ: 0.926435
Ran for 93050 frames Cell Events: 2996 mean_circ: 0.926331
Ran for 93550 frames Cell Events: 3005 mean_circ: 0.926358
Ran for 94050 frames Cell Events: 3030 mean_circ: 0.926284
Ran for 94550 frames Cell Events: 3047 mean_circ: 0.926232
Ran for 96050 frames Cell Events: 3095 mean_circ: 0.926325
Ran for 96550 frames Cell Events: 3107 mean_circ: 0.926321
Ran for 97050 frames Cell Events: 3120 mean_circ: 0.926327
Ran for 98550 frames Cell Events: 3159 mean_circ: 0.926188
Ran for 99050 frames Cell Events: 3179 mean_circ: 0.926235
Ran for 99550 frames Cell Events: 3191 mean_circ: 0.926186
Ran for 100050 frames Cell Events: 3204 mean_circ: 0.926202
Ran for 100550 frames Cell Events: 3225 mean_circ: 0.926057
Ran for 101050 frames Cell Events: 3242 mean_circ: 0.925993
Ran for 101550 frames Cell Events: 3254 mean_circ: 0.925884
Ran for 102050 frames Cell Events: 3272 mean_circ: 0.925876
Ran for 102550 frames Cell Events: 3295 mean_circ: 0.925926
Ran for 103550 frames Cell Events: 3316 mean_circ: 0.925985
Ran for 104050 frames Cell Events: 3336 mean_circ: 0.925959
Ran for 104550 frames Cell Events: 3352 mean_circ: 0.926007
Ran for 105050 frames Cell Events: 3366 mean_circ: 0.926009
Ran for 105550 frames Cell Events: 3379 mean_circ: 0.925915
Ran for 106050 frames Cell Events: 3397 mean_circ: 0.925949
Ran for 107050 frames Cell Events: 3413 mean_circ: 0.926008
Ran for 107550 frames Cell Events: 3424 mean_circ: 0.926032
Ran for 108050 frames Cell Events: 3447 mean_circ: 0.925871
Ran for 108550 frames Cell Events: 3452 mean_circ: 0.925903
Ran for 109050 frames Cell Events: 3471 mean_circ: 0.925988
Ran for 109550 frames Cell Events: 3487 mean_circ: 0.925997
Ran for 110050 frames Cell Events: 3510 mean_circ: 0.926001
Ran for 110550 frames Cell Events: 3522 mean_circ: 0.925998
Ran for 111550 frames Cell Events: 3572 mean_circ: 0.925972
Ran for 112050 frames Cell Events: 3585 mean_circ: 0.926113
Ran for 112550 frames Cell Events: 3604 mean_circ: 0.926077
Ran for 113050 frames Cell Events: 3629 mean_circ: 0.926164
Ran for 113550 frames Cell Events: 3643 mean_circ: 0.92614
Ran for 115050 frames Cell Events: 3705 mean_circ: 0.926255
Ran for 115550 frames Cell Events: 3715 mean_circ: 0.926309
Ran for 116050 frames Cell Events: 3724 mean_circ: 0.926302
Ran for 116550 frames Cell Events: 3738 mean_circ: 0.926269
Ran for 117050 frames Cell Events: 3754 mean_circ: 0.926385
Ran for 117550 frames Cell Events: 3769 mean_circ: 0.926398
Ran for 118550 frames Cell Events: 3809 mean_circ: 0.926411
Ran for 119050 frames Cell Events: 3833 mean_circ: 0.92644
Ran for 119550 frames Cell Events: 3858 mean_circ: 0.92634
Ran for 120550 frames Cell Events: 3885 mean_circ: 0.926394
Ran for 121050 frames Cell Events: 3898 mean_circ: 0.926253
Ran for 121550 frames Cell Events: 3912 mean_circ: 0.92624
Ran for 122050 frames Cell Events: 3934 mean_circ: 0.926324
Ran for 122550 frames Cell Events: 3951 mean_circ: 0.926376
Ran for 123550 frames Cell Events: 4004 mean_circ: 0.926474
Ran for 124050 frames Cell Events: 4015 mean_circ: 0.926484
Ran for 124550 frames Cell Events: 4030 mean_circ: 0.926527
Ran for 125050 frames Cell Events: 4044 mean_circ: 0.926543
Ran for 126050 frames Cell Events: 4086 mean_circ: 0.92628
Ran for 126550 frames Cell Events: 4102 mean_circ: 0.926325
Ran for 127050 frames Cell Events: 4124 mean_circ: 0.926369
Ran for 127550 frames Cell Events: 4137 mean_circ: 0.926302
Ran for 128550 frames Cell Events: 4164 mean_circ: 0.926223
Ran for 129050 frames Cell Events: 4177 mean_circ: 0.926219
Ran for 130050 frames Cell Events: 4206 mean_circ: 0.926167
Ran for 131050 frames Cell Events: 4250 mean_circ: 0.92629
Ran for 131550 frames Cell Events: 4269 mean_circ: 0.926279
Ran for 132050 frames Cell Events: 4291 mean_circ: 0.926314
Ran for 132550 frames Cell Events: 4308 mean_circ: 0.926306
Ran for 133550 frames Cell Events: 4343 mean_circ: 0.926171
Ran for 135050 frames Cell Events: 4397 mean_circ: 0.925987
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Ran for 141050 frames Cell Events: 4615 mean_circ: 0.926072
Ran for 141550 frames Cell Events: 4634 mean_circ: 0.926121
Ran for 142550 frames Cell Events: 4674 mean_circ: 0.926199
Ran for 143050 frames Cell Events: 4678 mean_circ: 0.926204
Ran for 143550 frames Cell Events: 4693 mean_circ: 0.926177
Ran for 144050 frames Cell Events: 4714 mean_circ: 0.926174
Ran for 144550 frames Cell Events: 4730 mean_circ: 0.926201
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Ran for 146550 frames Cell Events: 4817 mean_circ: 0.926036
Ran for 147550 frames Cell Events: 4851 mean_circ: 0.925936
Ran for 148050 frames Cell Events: 4864 mean_circ: 0.92592
Ran for 148550 frames Cell Events: 4877 mean_circ: 0.925869
Ran for 149050 frames Cell Events: 4888 mean_circ: 0.925896
Ran for 149550 frames Cell Events: 4903 mean_circ: 0.925897
Ran for 150050 frames Cell Events: 4920 mean_circ: 0.925928
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Ran for 151050 frames Cell Events: 4951 mean_circ: 0.925957
Ran for 151550 frames Cell Events: 4968 mean_circ: 0.925959
Ran for 152050 frames Cell Events: 4979 mean_circ: 0.925996
Ran for 152550 frames Cell Events: 4995 mean_circ: 0.925994
Ran for 153050 frames Cell Events: 5010 mean_circ: 0.92596
Ran for 153550 frames Cell Events: 5021 mean_circ: 0.925974
Ran for 154050 frames Cell Events: 5039 mean_circ: 0.925929
Ran for 155550 frames Cell Events: 5082 mean_circ: 0.925939
Ran for 156050 frames Cell Events: 5090 mean_circ: 0.92593
Ran for 156550 frames Cell Events: 5110 mean_circ: 0.925952
Ran for 157050 frames Cell Events: 5121 mean_circ: 0.92602
Ran for 157550 frames Cell Events: 5127 mean_circ: 0.926037
Ran for 158550 frames Cell Events: 5151 mean_circ: 0.926056
Ran for 159550 frames Cell Events: 5182 mean_circ: 0.926043
Ran for 160050 frames Cell Events: 5197 mean_circ: 0.926086
Ran for 160550 frames Cell Events: 5214 mean_circ: 0.926043
Ran for 161050 frames Cell Events: 5234 mean_circ: 0.92606
Ran for 161550 frames Cell Events: 5251 mean_circ: 0.926045
Ran for 162050 frames Cell Events: 5263 mean_circ: 0.92606
Ran for 163050 frames Cell Events: 5291 mean_circ: 0.926011
Ran for 163550 frames Cell Events: 5306 mean_circ: 0.926036
Ran for 164050 frames Cell Events: 5328 mean_circ: 0.92602
Ran for 164550 frames Cell Events: 5354 mean_circ: 0.926045
Ran for 165550 frames Cell Events: 5376 mean_circ: 0.925986
Ran for 166550 frames Cell Events: 5411 mean_circ: 0.925814
Ran for 167050 frames Cell Events: 5431 mean_circ: 0.925859
Ran for 167550 frames Cell Events: 5451 mean_circ: 0.925857
Ran for 169050 frames Cell Events: 5481 mean_circ: 0.925941
Ran for 169550 frames Cell Events: 5500 mean_circ: 0.925964
Ran for 170550 frames Cell Events: 5557 mean_circ: 0.925923
Ran for 171050 frames Cell Events: 5571 mean_circ: 0.925947
Ran for 172050 frames Cell Events: 5603 mean_circ: 0.925979
Ran for 172550 frames Cell Events: 5623 mean_circ: 0.925984
Ran for 173050 frames Cell Events: 5635 mean_circ: 0.926031
Ran for 173550 frames Cell Events: 5651 mean_circ: 0.926015
Ran for 174050 frames Cell Events: 5669 mean_circ: 0.925993
Ran for 174550 frames Cell Events: 5694 mean_circ: 0.926023
Ran for 175050 frames Cell Events: 5704 mean_circ: 0.926002
Ran for 175550 frames Cell Events: 5716 mean_circ: 0.926026
Ran for 176050 frames Cell Events: 5736 mean_circ: 0.926029
Ran for 176550 frames Cell Events: 5744 mean_circ: 0.926062
Ran for 177050 frames Cell Events: 5759 mean_circ: 0.926066
Ran for 177550 frames Cell Events: 5775 mean_circ: 0.926086
Ran for 178550 frames Cell Events: 5801 mean_circ: 0.926136
Ran for 180050 frames Cell Events: 5837 mean_circ: 0.926103
Ran for 180550 frames Cell Events: 5852 mean_circ: 0.926184
Ran for 182550 frames Cell Events: 5920 mean_circ: 0.926164
Ran for 183550 frames Cell Events: 5967 mean_circ: 0.92616
Ran for 184050 frames Cell Events: 5984 mean_circ: 0.926214
Ran for 184550 frames Cell Events: 5997 mean_circ: 0.926219
Ran for 185050 frames Cell Events: 6013 mean_circ: 0.926261
Ran for 185550 frames Cell Events: 6030 mean_circ: 0.926224
Ran for 186050 frames Cell Events: 6041 mean_circ: 0.926236
Ran for 187050 frames Cell Events: 6078 mean_circ: 0.926178
Ran for 187550 frames Cell Events: 6095 mean_circ: 0.926171
Ran for 188050 frames Cell Events: 6107 mean_circ: 0.926197
Ran for 188550 frames Cell Events: 6119 mean_circ: 0.926244
Ran for 189050 frames Cell Events: 6138 mean_circ: 0.926283
Ran for 189550 frames Cell Events: 6154 mean_circ: 0.926334
Ran for 190050 frames Cell Events: 6168 mean_circ: 0.926365
Ran for 190550 frames Cell Events: 6181 mean_circ: 0.926381
Ran for 191050 frames Cell Events: 6197 mean_circ: 0.926393
Ran for 192050 frames Cell Events: 6219 mean_circ: 0.926363
Ran for 192550 frames Cell Events: 6236 mean_circ: 0.926384
Ran for 193550 frames Cell Events: 6264 mean_circ: 0.926342
Ran for 194050 frames Cell Events: 6279 mean_circ: 0.926266
Ran for 195050 frames Cell Events: 6303 mean_circ: 0.926247
Ran for 196550 frames Cell Events: 6355 mean_circ: 0.926322
Ran for 197050 frames Cell Events: 6371 mean_circ: 0.926355
Ran for 197550 frames Cell Events: 6392 mean_circ: 0.926368
Ran for 198050 frames Cell Events: 6411 mean_circ: 0.926336
Ran for 198550 frames Cell Events: 6431 mean_circ: 0.926337
Ran for 199050 frames Cell Events: 6447 mean_circ: 0.926371
Ran for 199550 frames Cell Events: 6457 mean_circ: 0.926356
Ran for 200050 frames Cell Events: 6465 mean_circ: 0.926355
Ran for 200550 frames Cell Events: 6482 mean_circ: 0.926335
Ran for 201050 frames Cell Events: 6499 mean_circ: 0.926272
Ran for 202050 frames Cell Events: 6534 mean_circ: 0.926323
Ran for 203050 frames Cell Events: 6562 mean_circ: 0.926225
Ran for 204050 frames Cell Events: 6607 mean_circ: 0.925965
Ran for 204550 frames Cell Events: 6627 mean_circ: 0.925861
Ran for 205050 frames Cell Events: 6639 mean_circ: 0.925864
Ran for 205550 frames Cell Events: 6656 mean_circ: 0.925902
Ran for 206050 frames Cell Events: 6676 mean_circ: 0.925902
Ran for 206550 frames Cell Events: 6692 mean_circ: 0.925918
Ran for 207050 frames Cell Events: 6708 mean_circ: 0.925915
Ran for 207550 frames Cell Events: 6727 mean_circ: 0.92592
Ran for 208550 frames Cell Events: 6777 mean_circ: 0.925936
Ran for 209050 frames Cell Events: 6794 mean_circ: 0.92592
Ran for 209550 frames Cell Events: 6816 mean_circ: 0.925952
Ran for 210050 frames Cell Events: 6844 mean_circ: 0.925948
Ran for 211050 frames Cell Events: 6887 mean_circ: 0.92599
Ran for 212050 frames Cell Events: 6924 mean_circ: 0.926018
Ran for 212550 frames Cell Events: 6933 mean_circ: 0.926021
Ran for 213050 frames Cell Events: 6953 mean_circ: 0.925907
Ran for 213550 frames Cell Events: 6966 mean_circ: 0.925904
Ran for 214050 frames Cell Events: 6982 mean_circ: 0.925872
Ran for 214550 frames Cell Events: 6997 mean_circ: 0.925899
Ran for 215050 frames Cell Events: 7009 mean_circ: 0.925881
Ran for 216050 frames Cell Events: 7039 mean_circ: 0.925837
Ran for 217050 frames Cell Events: 7080 mean_circ: 0.925797
Ran for 218050 frames Cell Events: 7118 mean_circ: 0.925715
Ran for 219550 frames Cell Events: 7182 mean_circ: 0.925689
Ran for 220550 frames Cell Events: 7217 mean_circ: 0.925742
Ran for 221050 frames Cell Events: 7229 mean_circ: 0.925755
Ran for 222050 frames Cell Events: 7258 mean_circ: 0.925792
Ran for 223050 frames Cell Events: 7284 mean_circ: 0.925801
Ran for 223550 frames Cell Events: 7298 mean_circ: 0.925742
Ran for 224050 frames Cell Events: 7314 mean_circ: 0.925752
Ran for 224550 frames Cell Events: 7326 mean_circ: 0.925777
Ran for 225550 frames Cell Events: 7347 mean_circ: 0.925763
Ran for 226050 frames Cell Events: 7359 mean_circ: 0.925747
Ran for 226550 frames Cell Events: 7373 mean_circ: 0.925741
Ran for 227050 frames Cell Events: 7389 mean_circ: 0.925721
Ran for 227550 frames Cell Events: 7407 mean_circ: 0.925678
Ran for 228050 frames Cell Events: 7424 mean_circ: 0.925626
Ran for 228550 frames Cell Events: 7447 mean_circ: 0.925621
Ran for 229050 frames Cell Events: 7460 mean_circ: 0.925638
Ran for 230550 frames Cell Events: 7508 mean_circ: 0.925697
Ran for 231550 frames Cell Events: 7541 mean_circ: 0.925726
Ran for 232050 frames Cell Events: 7557 mean_circ: 0.925663
Ran for 232550 frames Cell Events: 7576 mean_circ: 0.925669
Ran for 233050 frames Cell Events: 7597 mean_circ: 0.925701
Ran for 233550 frames Cell Events: 7616 mean_circ: 0.925703
Ran for 235050 frames Cell Events: 7643 mean_circ: 0.925699
Ran for 235550 frames Cell Events: 7665 mean_circ: 0.925726
Ran for 236050 frames Cell Events: 7678 mean_circ: 0.925614
Ran for 237050 frames Cell Events: 7721 mean_circ: 0.925572
Ran for 237550 frames Cell Events: 7738 mean_circ: 0.925582
Ran for 238050 frames Cell Events: 7755 mean_circ: 0.925565
Ran for 238550 frames Cell Events: 7773 mean_circ: 0.925582
Ran for 239550 frames Cell Events: 7805 mean_circ: 0.92548
Ran for 240050 frames Cell Events: 7826 mean_circ: 0.92551
Ran for 240550 frames Cell Events: 7836 mean_circ: 0.92551
Ran for 242550 frames Cell Events: 7920 mean_circ: 0.925562
Ran for 243050 frames Cell Events: 7942 mean_circ: 0.925594
Ran for 243550 frames Cell Events: 7957 mean_circ: 0.925572
Ran for 244050 frames Cell Events: 7976 mean_circ: 0.925592
Ran for 244550 frames Cell Events: 7989 mean_circ: 0.925644



End this measurment..



Stopping time: 3.04455e+008
****************************************
Measurement finished

Mean Circularitiy: 0.925642
Mean Area: 686.68
Mean FL-1 intensity: 3023.08
Mean FL-2 intensity: 5508.23
Mean FL-3 intensity: 0

frames processed: 241644
Total Time: 122493ms
Number of Runs (new bg img) 0
Frames collected: 244820
Skipped frames: 99817
Rescued Frames: 5400879
Samples DAQ: 61204931
Samples written: 122409576
Samples per Channel: 61204788
FPS: 1998.65

Samples per second: 499660
Expected samples/s: 500000

Events: 7998
Events per second: 65.2935
jumped back (PMT): 9
#Frames read, frequency
# 0 frames :324664
# 1 frames :148972
# 2 frames :4641
# 3 frames :1454
# 4 frames :519
# 5 frames :149
# 6 frames :3648
# 7 frames :1516
# 8 frames :1330
# 9 frames :575
# 10 frames :609
# 11 frames :245
# 12 frames :383
# 13 frames :184
# 14 frames :192
# 15 frames :152
# 16 frames :103
# 17 frames :86
# 18 frames :39
# 19 frames :17
# 20 frames :22
# 21 frames :29
# 22 frames :15
# 23 frames :11
# 24 frames :11
# 25 frames :4
# 26 frames :4
# 27 frames :4
# 28 frames :6
# 29 frames :2
# 30 frames :2
# 31 frames :4
# 32 frames :3
# 33 frames :2
# 34 frames :1
# 35 frames :1
# 40 frames :2
# 42 frames :1
# 45 frames :1
# 51 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 27.5072
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0