Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-09_18.27.12 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "74d6d025c249ac4207dea83fbfbab54e",
"name": "M1_20170519_1426_dsRNA_K7_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "16:27:41"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8222 (max 8223) in '8222'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 26.8115
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 3.6746e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 16 mean_circ: 0.940577
Ran for 1050 frames Cell Events: 29 mean_circ: 0.945023
Ran for 2050 frames Cell Events: 63 mean_circ: 0.947869
Ran for 2550 frames Cell Events: 78 mean_circ: 0.945412
Ran for 3050 frames Cell Events: 90 mean_circ: 0.946601
Ran for 3550 frames Cell Events: 109 mean_circ: 0.9471
Ran for 4050 frames Cell Events: 118 mean_circ: 0.947111
Ran for 5050 frames Cell Events: 144 mean_circ: 0.946261
Ran for 5550 frames Cell Events: 153 mean_circ: 0.947524
Ran for 6050 frames Cell Events: 159 mean_circ: 0.948061
Ran for 6550 frames Cell Events: 169 mean_circ: 0.94791
Ran for 7550 frames Cell Events: 188 mean_circ: 0.947499
Ran for 8550 frames Cell Events: 218 mean_circ: 0.944963
Ran for 9050 frames Cell Events: 228 mean_circ: 0.945485
Ran for 10050 frames Cell Events: 256 mean_circ: 0.944255
Ran for 10550 frames Cell Events: 271 mean_circ: 0.944448
Ran for 11050 frames Cell Events: 294 mean_circ: 0.944393
Ran for 12050 frames Cell Events: 323 mean_circ: 0.94487
Ran for 12550 frames Cell Events: 338 mean_circ: 0.944846
Ran for 13550 frames Cell Events: 367 mean_circ: 0.945866
Ran for 14050 frames Cell Events: 382 mean_circ: 0.94629
Ran for 15050 frames Cell Events: 403 mean_circ: 0.946072
Ran for 15550 frames Cell Events: 416 mean_circ: 0.946395
Ran for 16550 frames Cell Events: 465 mean_circ: 0.946968
Ran for 17550 frames Cell Events: 506 mean_circ: 0.947992
Ran for 18050 frames Cell Events: 533 mean_circ: 0.948627
Ran for 18550 frames Cell Events: 550 mean_circ: 0.948947
Ran for 19050 frames Cell Events: 557 mean_circ: 0.949117
Ran for 19550 frames Cell Events: 566 mean_circ: 0.949231
Ran for 20050 frames Cell Events: 584 mean_circ: 0.949332
Ran for 20550 frames Cell Events: 595 mean_circ: 0.949335
Ran for 21550 frames Cell Events: 621 mean_circ: 0.948674
Ran for 22050 frames Cell Events: 629 mean_circ: 0.94875
Ran for 23050 frames Cell Events: 669 mean_circ: 0.948283
Ran for 23550 frames Cell Events: 687 mean_circ: 0.948177
Ran for 24050 frames Cell Events: 711 mean_circ: 0.948081
Ran for 25050 frames Cell Events: 757 mean_circ: 0.946688
Ran for 25550 frames Cell Events: 768 mean_circ: 0.946966
Ran for 26550 frames Cell Events: 802 mean_circ: 0.946215
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Ran for 28050 frames Cell Events: 845 mean_circ: 0.946254
Ran for 28550 frames Cell Events: 863 mean_circ: 0.946227
Ran for 29050 frames Cell Events: 901 mean_circ: 0.945856
Ran for 30050 frames Cell Events: 936 mean_circ: 0.946009
Ran for 31050 frames Cell Events: 961 mean_circ: 0.946233
Ran for 31550 frames Cell Events: 970 mean_circ: 0.946159
Ran for 32550 frames Cell Events: 1018 mean_circ: 0.946234
Ran for 33050 frames Cell Events: 1024 mean_circ: 0.946399
Ran for 33550 frames Cell Events: 1047 mean_circ: 0.946278
Ran for 34050 frames Cell Events: 1057 mean_circ: 0.946265
Ran for 34550 frames Cell Events: 1074 mean_circ: 0.946376
Ran for 35050 frames Cell Events: 1093 mean_circ: 0.946143
Ran for 35550 frames Cell Events: 1105 mean_circ: 0.946043
Ran for 36050 frames Cell Events: 1118 mean_circ: 0.946015
Ran for 37050 frames Cell Events: 1138 mean_circ: 0.945903
Ran for 37550 frames Cell Events: 1164 mean_circ: 0.945855
Ran for 38050 frames Cell Events: 1178 mean_circ: 0.946119
Ran for 38550 frames Cell Events: 1186 mean_circ: 0.946128
Ran for 39050 frames Cell Events: 1197 mean_circ: 0.946146
Ran for 39550 frames Cell Events: 1209 mean_circ: 0.946069
Ran for 40050 frames Cell Events: 1227 mean_circ: 0.945726
Ran for 40550 frames Cell Events: 1244 mean_circ: 0.945754
Ran for 41050 frames Cell Events: 1256 mean_circ: 0.945677
Ran for 41550 frames Cell Events: 1276 mean_circ: 0.945392
Ran for 42050 frames Cell Events: 1309 mean_circ: 0.944933
Ran for 42550 frames Cell Events: 1329 mean_circ: 0.944819
Ran for 43050 frames Cell Events: 1346 mean_circ: 0.944826
Ran for 43550 frames Cell Events: 1361 mean_circ: 0.944636
Ran for 44050 frames Cell Events: 1378 mean_circ: 0.944807
Ran for 44550 frames Cell Events: 1390 mean_circ: 0.944699
Ran for 45050 frames Cell Events: 1401 mean_circ: 0.944812
Ran for 45550 frames Cell Events: 1412 mean_circ: 0.944745
Ran for 46050 frames Cell Events: 1424 mean_circ: 0.944856
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Ran for 48050 frames Cell Events: 1465 mean_circ: 0.944831
Ran for 48550 frames Cell Events: 1476 mean_circ: 0.944749
Ran for 49050 frames Cell Events: 1488 mean_circ: 0.944656
Ran for 50550 frames Cell Events: 1548 mean_circ: 0.944684
Ran for 51050 frames Cell Events: 1571 mean_circ: 0.944846
Ran for 51550 frames Cell Events: 1591 mean_circ: 0.944888
Ran for 52550 frames Cell Events: 1627 mean_circ: 0.945079
Ran for 53050 frames Cell Events: 1644 mean_circ: 0.945096
Ran for 53550 frames Cell Events: 1649 mean_circ: 0.945022
Ran for 54050 frames Cell Events: 1661 mean_circ: 0.944963
Ran for 54550 frames Cell Events: 1673 mean_circ: 0.944962
Ran for 55050 frames Cell Events: 1695 mean_circ: 0.944998
Ran for 55550 frames Cell Events: 1719 mean_circ: 0.944833
Ran for 56050 frames Cell Events: 1737 mean_circ: 0.944926
Ran for 56550 frames Cell Events: 1755 mean_circ: 0.944982
Ran for 57050 frames Cell Events: 1766 mean_circ: 0.945071
Ran for 57550 frames Cell Events: 1776 mean_circ: 0.945006
Ran for 58050 frames Cell Events: 1787 mean_circ: 0.944831
Ran for 58550 frames Cell Events: 1795 mean_circ: 0.944736
Ran for 59050 frames Cell Events: 1823 mean_circ: 0.944807
Ran for 59550 frames Cell Events: 1844 mean_circ: 0.944787
Ran for 60550 frames Cell Events: 1882 mean_circ: 0.944757
Ran for 61050 frames Cell Events: 1900 mean_circ: 0.944826
Ran for 62050 frames Cell Events: 1924 mean_circ: 0.944914
Ran for 62550 frames Cell Events: 1940 mean_circ: 0.944807
Ran for 63050 frames Cell Events: 1958 mean_circ: 0.944846
Ran for 63550 frames Cell Events: 1968 mean_circ: 0.944892
Ran for 64050 frames Cell Events: 1985 mean_circ: 0.944889
Ran for 64550 frames Cell Events: 1999 mean_circ: 0.944956
Ran for 65550 frames Cell Events: 2033 mean_circ: 0.945103
Ran for 66050 frames Cell Events: 2048 mean_circ: 0.945196
Ran for 67050 frames Cell Events: 2081 mean_circ: 0.945015
Ran for 68050 frames Cell Events: 2111 mean_circ: 0.94485
Ran for 69050 frames Cell Events: 2137 mean_circ: 0.944808
Ran for 69550 frames Cell Events: 2153 mean_circ: 0.944846
Ran for 70550 frames Cell Events: 2194 mean_circ: 0.945021
Ran for 71550 frames Cell Events: 2216 mean_circ: 0.945145
Ran for 72550 frames Cell Events: 2236 mean_circ: 0.945156
Ran for 73550 frames Cell Events: 2259 mean_circ: 0.945232
Ran for 74050 frames Cell Events: 2274 mean_circ: 0.94522
Ran for 74550 frames Cell Events: 2298 mean_circ: 0.945332
Ran for 76050 frames Cell Events: 2331 mean_circ: 0.945508
Ran for 77050 frames Cell Events: 2359 mean_circ: 0.945491
Ran for 77550 frames Cell Events: 2371 mean_circ: 0.94561
Ran for 78050 frames Cell Events: 2385 mean_circ: 0.945626
Ran for 79050 frames Cell Events: 2410 mean_circ: 0.945698
Ran for 79550 frames Cell Events: 2421 mean_circ: 0.945714
Ran for 80050 frames Cell Events: 2443 mean_circ: 0.945736
Ran for 80550 frames Cell Events: 2458 mean_circ: 0.945773
Ran for 81050 frames Cell Events: 2471 mean_circ: 0.945761
Ran for 81550 frames Cell Events: 2483 mean_circ: 0.945771
Ran for 82550 frames Cell Events: 2514 mean_circ: 0.945944
Ran for 83050 frames Cell Events: 2529 mean_circ: 0.945921
Ran for 85050 frames Cell Events: 2616 mean_circ: 0.945878
Ran for 85550 frames Cell Events: 2638 mean_circ: 0.945919
Ran for 86050 frames Cell Events: 2656 mean_circ: 0.945947
Ran for 86550 frames Cell Events: 2678 mean_circ: 0.94597
Ran for 87050 frames Cell Events: 2693 mean_circ: 0.94598
Ran for 87550 frames Cell Events: 2712 mean_circ: 0.94594
Ran for 88050 frames Cell Events: 2728 mean_circ: 0.945911
Ran for 88550 frames Cell Events: 2744 mean_circ: 0.946001
Ran for 89050 frames Cell Events: 2753 mean_circ: 0.946057
Ran for 89550 frames Cell Events: 2771 mean_circ: 0.946122
Ran for 90050 frames Cell Events: 2790 mean_circ: 0.946199
Ran for 91550 frames Cell Events: 2854 mean_circ: 0.946202
Ran for 92050 frames Cell Events: 2877 mean_circ: 0.946285
Ran for 92550 frames Cell Events: 2896 mean_circ: 0.9463
Ran for 94050 frames Cell Events: 2934 mean_circ: 0.946207
Ran for 94550 frames Cell Events: 2952 mean_circ: 0.946231
Ran for 95050 frames Cell Events: 2963 mean_circ: 0.946167
Ran for 95550 frames Cell Events: 2973 mean_circ: 0.946189
Ran for 96050 frames Cell Events: 2987 mean_circ: 0.946253
Ran for 96550 frames Cell Events: 2998 mean_circ: 0.946284
Ran for 97050 frames Cell Events: 3015 mean_circ: 0.946236
Ran for 97550 frames Cell Events: 3029 mean_circ: 0.946199
Ran for 98050 frames Cell Events: 3040 mean_circ: 0.946234
Ran for 99550 frames Cell Events: 3083 mean_circ: 0.946383
Ran for 100050 frames Cell Events: 3102 mean_circ: 0.946445
Ran for 100550 frames Cell Events: 3117 mean_circ: 0.946445
Ran for 101050 frames Cell Events: 3129 mean_circ: 0.946513
Ran for 102050 frames Cell Events: 3168 mean_circ: 0.946476
Ran for 102550 frames Cell Events: 3188 mean_circ: 0.946508
Ran for 103050 frames Cell Events: 3202 mean_circ: 0.94648
Ran for 103550 frames Cell Events: 3211 mean_circ: 0.946525
Ran for 104050 frames Cell Events: 3229 mean_circ: 0.946514
Ran for 104550 frames Cell Events: 3243 mean_circ: 0.946544
Ran for 105050 frames Cell Events: 3251 mean_circ: 0.946485
Ran for 105550 frames Cell Events: 3266 mean_circ: 0.946499
Ran for 106550 frames Cell Events: 3294 mean_circ: 0.94651
Ran for 107050 frames Cell Events: 3307 mean_circ: 0.946496
Ran for 108050 frames Cell Events: 3336 mean_circ: 0.946568
Ran for 108550 frames Cell Events: 3349 mean_circ: 0.946578
Ran for 109050 frames Cell Events: 3363 mean_circ: 0.946617
Ran for 109550 frames Cell Events: 3384 mean_circ: 0.946612
Ran for 110050 frames Cell Events: 3400 mean_circ: 0.946553
Ran for 110550 frames Cell Events: 3413 mean_circ: 0.946554
Ran for 111050 frames Cell Events: 3426 mean_circ: 0.946597
Ran for 111550 frames Cell Events: 3443 mean_circ: 0.946615
Ran for 113050 frames Cell Events: 3491 mean_circ: 0.946497
Ran for 113550 frames Cell Events: 3508 mean_circ: 0.946514
Ran for 114550 frames Cell Events: 3528 mean_circ: 0.946452
Ran for 116050 frames Cell Events: 3572 mean_circ: 0.946515
Ran for 117050 frames Cell Events: 3605 mean_circ: 0.946602
Ran for 117550 frames Cell Events: 3625 mean_circ: 0.946624
Ran for 118050 frames Cell Events: 3641 mean_circ: 0.946678
Ran for 119050 frames Cell Events: 3678 mean_circ: 0.946763
Ran for 119550 frames Cell Events: 3698 mean_circ: 0.946817
Ran for 120050 frames Cell Events: 3716 mean_circ: 0.946762
Ran for 120550 frames Cell Events: 3734 mean_circ: 0.946738
Ran for 121050 frames Cell Events: 3750 mean_circ: 0.94671
Ran for 121550 frames Cell Events: 3779 mean_circ: 0.946637
Ran for 122050 frames Cell Events: 3802 mean_circ: 0.946652
Ran for 122550 frames Cell Events: 3811 mean_circ: 0.946622
Ran for 123050 frames Cell Events: 3840 mean_circ: 0.946606
Ran for 123550 frames Cell Events: 3861 mean_circ: 0.946614
Ran for 124050 frames Cell Events: 3882 mean_circ: 0.946632
Ran for 125050 frames Cell Events: 3914 mean_circ: 0.946725
Ran for 125550 frames Cell Events: 3929 mean_circ: 0.946732
Ran for 126550 frames Cell Events: 3973 mean_circ: 0.946688
Ran for 127050 frames Cell Events: 3989 mean_circ: 0.946656
Ran for 127550 frames Cell Events: 4011 mean_circ: 0.94667
Ran for 128050 frames Cell Events: 4024 mean_circ: 0.946726
Ran for 129050 frames Cell Events: 4056 mean_circ: 0.946807
Ran for 129550 frames Cell Events: 4082 mean_circ: 0.946788
Ran for 130050 frames Cell Events: 4097 mean_circ: 0.946844
Ran for 130550 frames Cell Events: 4107 mean_circ: 0.946869
Ran for 131050 frames Cell Events: 4114 mean_circ: 0.946878
Ran for 131550 frames Cell Events: 4124 mean_circ: 0.946901
Ran for 132050 frames Cell Events: 4140 mean_circ: 0.94685
Ran for 132550 frames Cell Events: 4148 mean_circ: 0.946804
Ran for 133550 frames Cell Events: 4178 mean_circ: 0.946772
Ran for 134050 frames Cell Events: 4204 mean_circ: 0.94685
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Ran for 136050 frames Cell Events: 4275 mean_circ: 0.946902
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Ran for 137550 frames Cell Events: 4326 mean_circ: 0.946815
Ran for 138050 frames Cell Events: 4345 mean_circ: 0.946821
Ran for 139050 frames Cell Events: 4385 mean_circ: 0.946792
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Ran for 140550 frames Cell Events: 4451 mean_circ: 0.946819
Ran for 141550 frames Cell Events: 4495 mean_circ: 0.946869
Ran for 142050 frames Cell Events: 4511 mean_circ: 0.946877
Ran for 143550 frames Cell Events: 4585 mean_circ: 0.946788
Ran for 144550 frames Cell Events: 4613 mean_circ: 0.946849
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Ran for 145550 frames Cell Events: 4647 mean_circ: 0.94694
Ran for 146050 frames Cell Events: 4673 mean_circ: 0.946977
Ran for 146550 frames Cell Events: 4684 mean_circ: 0.946996
Ran for 147050 frames Cell Events: 4699 mean_circ: 0.946989
Ran for 147550 frames Cell Events: 4721 mean_circ: 0.946964
Ran for 148550 frames Cell Events: 4756 mean_circ: 0.946992
Ran for 149050 frames Cell Events: 4772 mean_circ: 0.947022
Ran for 149550 frames Cell Events: 4791 mean_circ: 0.94705
Ran for 150050 frames Cell Events: 4810 mean_circ: 0.947086
Ran for 150550 frames Cell Events: 4827 mean_circ: 0.947081
Ran for 151050 frames Cell Events: 4851 mean_circ: 0.947076
Ran for 151550 frames Cell Events: 4870 mean_circ: 0.947139
Ran for 152050 frames Cell Events: 4882 mean_circ: 0.947187
Ran for 152550 frames Cell Events: 4896 mean_circ: 0.947207
Ran for 153050 frames Cell Events: 4909 mean_circ: 0.947213
Ran for 153550 frames Cell Events: 4921 mean_circ: 0.947228
Ran for 154050 frames Cell Events: 4931 mean_circ: 0.947246
Ran for 154550 frames Cell Events: 4943 mean_circ: 0.947252
Ran for 155050 frames Cell Events: 4961 mean_circ: 0.947235
Ran for 156050 frames Cell Events: 5005 mean_circ: 0.947144
Ran for 156550 frames Cell Events: 5016 mean_circ: 0.947114
Ran for 157050 frames Cell Events: 5031 mean_circ: 0.947101
Ran for 158050 frames Cell Events: 5072 mean_circ: 0.947142
Ran for 159550 frames Cell Events: 5134 mean_circ: 0.947208
Ran for 160050 frames Cell Events: 5155 mean_circ: 0.94721
Ran for 160550 frames Cell Events: 5180 mean_circ: 0.947261
Ran for 161550 frames Cell Events: 5209 mean_circ: 0.947377
Ran for 163550 frames Cell Events: 5282 mean_circ: 0.947295
Ran for 164550 frames Cell Events: 5318 mean_circ: 0.947269
Ran for 165050 frames Cell Events: 5334 mean_circ: 0.947257
Ran for 166050 frames Cell Events: 5365 mean_circ: 0.947311
Ran for 167550 frames Cell Events: 5438 mean_circ: 0.947323
Ran for 168550 frames Cell Events: 5449 mean_circ: 0.947354
Ran for 169050 frames Cell Events: 5465 mean_circ: 0.94738
Ran for 170050 frames Cell Events: 5490 mean_circ: 0.947329
Ran for 170550 frames Cell Events: 5501 mean_circ: 0.947308
Ran for 171050 frames Cell Events: 5529 mean_circ: 0.947343
Ran for 171550 frames Cell Events: 5543 mean_circ: 0.947354
Ran for 172050 frames Cell Events: 5558 mean_circ: 0.947357
Ran for 172550 frames Cell Events: 5569 mean_circ: 0.947359
Ran for 173550 frames Cell Events: 5598 mean_circ: 0.947367
Ran for 174050 frames Cell Events: 5612 mean_circ: 0.947334
Ran for 174550 frames Cell Events: 5634 mean_circ: 0.947303
Ran for 175050 frames Cell Events: 5650 mean_circ: 0.947341
Ran for 176050 frames Cell Events: 5676 mean_circ: 0.947345
Ran for 176550 frames Cell Events: 5692 mean_circ: 0.94731
Ran for 177550 frames Cell Events: 5725 mean_circ: 0.9473
Ran for 178050 frames Cell Events: 5741 mean_circ: 0.947334
Ran for 178550 frames Cell Events: 5754 mean_circ: 0.947367
Ran for 179050 frames Cell Events: 5774 mean_circ: 0.947391
Ran for 180050 frames Cell Events: 5810 mean_circ: 0.947383
Ran for 180550 frames Cell Events: 5829 mean_circ: 0.947416
Ran for 181050 frames Cell Events: 5845 mean_circ: 0.947415
Ran for 181550 frames Cell Events: 5863 mean_circ: 0.947354
Ran for 182550 frames Cell Events: 5907 mean_circ: 0.947391
Ran for 183050 frames Cell Events: 5928 mean_circ: 0.947381
Ran for 183550 frames Cell Events: 5947 mean_circ: 0.947392
Ran for 184050 frames Cell Events: 5958 mean_circ: 0.947371
Ran for 184550 frames Cell Events: 5973 mean_circ: 0.947362
Ran for 185050 frames Cell Events: 5991 mean_circ: 0.947385
Ran for 185550 frames Cell Events: 6018 mean_circ: 0.947401
Ran for 186050 frames Cell Events: 6047 mean_circ: 0.94739
Ran for 187050 frames Cell Events: 6076 mean_circ: 0.947365
Ran for 187550 frames Cell Events: 6086 mean_circ: 0.947333
Ran for 188050 frames Cell Events: 6111 mean_circ: 0.947312
Ran for 188550 frames Cell Events: 6129 mean_circ: 0.947344
Ran for 189050 frames Cell Events: 6148 mean_circ: 0.947352
Ran for 190550 frames Cell Events: 6230 mean_circ: 0.947364
Ran for 191550 frames Cell Events: 6260 mean_circ: 0.947415
Ran for 192550 frames Cell Events: 6270 mean_circ: 0.94744
Ran for 193050 frames Cell Events: 6287 mean_circ: 0.947426
Ran for 193550 frames Cell Events: 6308 mean_circ: 0.947418
Ran for 194050 frames Cell Events: 6339 mean_circ: 0.94746
Ran for 196050 frames Cell Events: 6418 mean_circ: 0.947459
Ran for 197550 frames Cell Events: 6483 mean_circ: 0.947408
Ran for 198050 frames Cell Events: 6497 mean_circ: 0.947395
Ran for 198550 frames Cell Events: 6518 mean_circ: 0.947432
Ran for 199050 frames Cell Events: 6532 mean_circ: 0.947425
Ran for 199550 frames Cell Events: 6540 mean_circ: 0.947403
Ran for 200050 frames Cell Events: 6557 mean_circ: 0.947422
Ran for 200550 frames Cell Events: 6579 mean_circ: 0.947462
Ran for 201550 frames Cell Events: 6612 mean_circ: 0.947464
Ran for 202050 frames Cell Events: 6625 mean_circ: 0.947468
Ran for 203050 frames Cell Events: 6659 mean_circ: 0.947506
Ran for 203550 frames Cell Events: 6678 mean_circ: 0.947503
Ran for 204050 frames Cell Events: 6697 mean_circ: 0.947494
Ran for 204550 frames Cell Events: 6716 mean_circ: 0.947515
Ran for 205050 frames Cell Events: 6736 mean_circ: 0.947448
Ran for 206050 frames Cell Events: 6760 mean_circ: 0.947464
Ran for 206550 frames Cell Events: 6776 mean_circ: 0.947485
Ran for 207050 frames Cell Events: 6795 mean_circ: 0.947438
Ran for 207550 frames Cell Events: 6810 mean_circ: 0.947443
Ran for 208050 frames Cell Events: 6819 mean_circ: 0.947467
Ran for 209550 frames Cell Events: 6864 mean_circ: 0.947449
Ran for 210050 frames Cell Events: 6880 mean_circ: 0.94743
Ran for 211550 frames Cell Events: 6926 mean_circ: 0.947426
Ran for 212050 frames Cell Events: 6941 mean_circ: 0.947367
Ran for 213050 frames Cell Events: 6974 mean_circ: 0.947374
Ran for 213550 frames Cell Events: 6993 mean_circ: 0.947376
Ran for 214050 frames Cell Events: 7008 mean_circ: 0.9474
Ran for 214550 frames Cell Events: 7024 mean_circ: 0.947413
Ran for 215550 frames Cell Events: 7061 mean_circ: 0.947408
Ran for 216550 frames Cell Events: 7096 mean_circ: 0.947366
Ran for 217050 frames Cell Events: 7108 mean_circ: 0.947388
Ran for 217550 frames Cell Events: 7127 mean_circ: 0.947357
Ran for 218050 frames Cell Events: 7140 mean_circ: 0.947356
Ran for 218550 frames Cell Events: 7158 mean_circ: 0.947351
Ran for 220050 frames Cell Events: 7220 mean_circ: 0.947345
Ran for 221050 frames Cell Events: 7252 mean_circ: 0.947413
Ran for 222050 frames Cell Events: 7292 mean_circ: 0.947413
Ran for 223050 frames Cell Events: 7323 mean_circ: 0.947436
Ran for 223550 frames Cell Events: 7339 mean_circ: 0.947416
Ran for 224050 frames Cell Events: 7373 mean_circ: 0.947425
Ran for 225050 frames Cell Events: 7419 mean_circ: 0.947424
Ran for 226050 frames Cell Events: 7459 mean_circ: 0.9474
Ran for 227050 frames Cell Events: 7499 mean_circ: 0.947398
Ran for 228050 frames Cell Events: 7518 mean_circ: 0.947435
Ran for 228550 frames Cell Events: 7533 mean_circ: 0.947444
Ran for 229050 frames Cell Events: 7551 mean_circ: 0.947467
Ran for 229550 frames Cell Events: 7566 mean_circ: 0.947468
Ran for 230050 frames Cell Events: 7587 mean_circ: 0.947452
Ran for 230550 frames Cell Events: 7596 mean_circ: 0.94743
Ran for 231550 frames Cell Events: 7659 mean_circ: 0.947481
Ran for 232050 frames Cell Events: 7674 mean_circ: 0.9475
Ran for 232550 frames Cell Events: 7690 mean_circ: 0.94751
Ran for 233050 frames Cell Events: 7713 mean_circ: 0.947479
Ran for 233550 frames Cell Events: 7735 mean_circ: 0.947457
Ran for 234550 frames Cell Events: 7774 mean_circ: 0.947515
Ran for 235050 frames Cell Events: 7791 mean_circ: 0.947538
Ran for 235550 frames Cell Events: 7808 mean_circ: 0.947542
Ran for 236550 frames Cell Events: 7841 mean_circ: 0.947533
Ran for 237050 frames Cell Events: 7865 mean_circ: 0.947534
Ran for 237550 frames Cell Events: 7877 mean_circ: 0.947518
Ran for 238050 frames Cell Events: 7903 mean_circ: 0.947525
Ran for 239050 frames Cell Events: 7939 mean_circ: 0.94758
Ran for 239550 frames Cell Events: 7953 mean_circ: 0.947561
Ran for 240050 frames Cell Events: 7967 mean_circ: 0.947558
Ran for 240550 frames Cell Events: 7979 mean_circ: 0.947526
Ran for 241050 frames Cell Events: 7995 mean_circ: 0.947513
Ran for 242050 frames Cell Events: 8046 mean_circ: 0.947508
Ran for 242550 frames Cell Events: 8055 mean_circ: 0.947495
Ran for 243550 frames Cell Events: 8075 mean_circ: 0.947514
Ran for 244050 frames Cell Events: 8091 mean_circ: 0.947499
Ran for 245050 frames Cell Events: 8144 mean_circ: 0.947503
Ran for 245550 frames Cell Events: 8159 mean_circ: 0.947525
Ran for 246050 frames Cell Events: 8178 mean_circ: 0.947531
Ran for 246550 frames Cell Events: 8193 mean_circ: 0.947508
Ran for 247050 frames Cell Events: 8204 mean_circ: 0.947502



End this measurment..



Stopping time: 3.67584e+008
****************************************
Measurement finished

Mean Circularitiy: 0.947448
Mean Area: 586.277
Mean FL-1 intensity: 3104.04
Mean FL-2 intensity: 4596.78
Mean FL-3 intensity: 0

frames processed: 245395
Total Time: 123873ms
Number of Runs (new bg img) 0
Frames collected: 247527
Skipped frames: 25304
Rescued Frames: 1273130
Samples DAQ: 61883691
Samples written: 123763614
Samples per Channel: 61881807
FPS: 1998.24

Samples per second: 499560
Expected samples/s: 500000

Events: 8223
Events per second: 66.3827
jumped back (PMT): 4942
#Frames read, frequency
# 0 frames :329539
# 1 frames :148974
# 2 frames :4994
# 3 frames :1454
# 4 frames :610
# 5 frames :191
# 6 frames :3404
# 7 frames :1537
# 8 frames :1472
# 9 frames :613
# 10 frames :486
# 11 frames :294
# 12 frames :383
# 13 frames :187
# 14 frames :233
# 15 frames :125
# 16 frames :132
# 17 frames :65
# 18 frames :42
# 19 frames :30
# 20 frames :44
# 21 frames :37
# 22 frames :34
# 23 frames :25
# 24 frames :15
# 25 frames :14
# 26 frames :5
# 27 frames :8
# 28 frames :5
# 29 frames :4
# 30 frames :6
# 31 frames :3
# 32 frames :5
# 33 frames :3
# 34 frames :2
# 35 frames :1
# 36 frames :2
# 37 frames :1
# 38 frames :3
# 39 frames :1
# 40 frames :1
# 41 frames :1
# 42 frames :2
# 45 frames :1
# 52 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 26.8115
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0