Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-09_18.55.46 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "d6a75abb4cab2f228c9db5ebeb458c3c",
"name": "M1_20170521_1614_dsRNA_a7_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "16:56:10"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8023 (max 8024) in '8023'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.8788
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 5.46689e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 17 mean_circ: 0.959207
Ran for 1050 frames Cell Events: 27 mean_circ: 0.944719
Ran for 1550 frames Cell Events: 38 mean_circ: 0.947495
Ran for 2550 frames Cell Events: 73 mean_circ: 0.939461
Ran for 3050 frames Cell Events: 85 mean_circ: 0.939221
Ran for 4050 frames Cell Events: 100 mean_circ: 0.937322
Ran for 4550 frames Cell Events: 104 mean_circ: 0.938092
Ran for 5050 frames Cell Events: 116 mean_circ: 0.938582
Ran for 5550 frames Cell Events: 132 mean_circ: 0.937683
Ran for 6050 frames Cell Events: 141 mean_circ: 0.941148
Ran for 6550 frames Cell Events: 153 mean_circ: 0.942059
Ran for 7550 frames Cell Events: 176 mean_circ: 0.941683
Ran for 8550 frames Cell Events: 196 mean_circ: 0.942301
Ran for 9050 frames Cell Events: 205 mean_circ: 0.941821
Ran for 9550 frames Cell Events: 217 mean_circ: 0.941532
Ran for 10050 frames Cell Events: 224 mean_circ: 0.941524
Ran for 11550 frames Cell Events: 260 mean_circ: 0.943626
Ran for 12050 frames Cell Events: 267 mean_circ: 0.943838
Ran for 12550 frames Cell Events: 283 mean_circ: 0.943363
Ran for 13050 frames Cell Events: 295 mean_circ: 0.942908
Ran for 13550 frames Cell Events: 302 mean_circ: 0.942864
Ran for 14050 frames Cell Events: 317 mean_circ: 0.942968
Ran for 15050 frames Cell Events: 344 mean_circ: 0.943372
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Ran for 17550 frames Cell Events: 398 mean_circ: 0.942114
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Ran for 21050 frames Cell Events: 474 mean_circ: 0.943125
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Ran for 22050 frames Cell Events: 485 mean_circ: 0.943508
Ran for 22550 frames Cell Events: 495 mean_circ: 0.942974
Ran for 23550 frames Cell Events: 514 mean_circ: 0.94281
Ran for 24050 frames Cell Events: 528 mean_circ: 0.942948
Ran for 24550 frames Cell Events: 537 mean_circ: 0.9427
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Ran for 25550 frames Cell Events: 559 mean_circ: 0.942565
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Ran for 31050 frames Cell Events: 669 mean_circ: 0.943406
Ran for 32050 frames Cell Events: 689 mean_circ: 0.943136
Ran for 32550 frames Cell Events: 702 mean_circ: 0.943277
Ran for 33050 frames Cell Events: 720 mean_circ: 0.943321
Ran for 33550 frames Cell Events: 738 mean_circ: 0.943427
Ran for 34050 frames Cell Events: 748 mean_circ: 0.943206
Ran for 34550 frames Cell Events: 758 mean_circ: 0.943306
Ran for 36050 frames Cell Events: 797 mean_circ: 0.943025
Ran for 36550 frames Cell Events: 812 mean_circ: 0.942699
Ran for 37550 frames Cell Events: 855 mean_circ: 0.942985
Ran for 38050 frames Cell Events: 863 mean_circ: 0.943129
Ran for 38550 frames Cell Events: 871 mean_circ: 0.943083
Ran for 39050 frames Cell Events: 879 mean_circ: 0.943152
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Ran for 40550 frames Cell Events: 915 mean_circ: 0.943211
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Ran for 41550 frames Cell Events: 939 mean_circ: 0.943527
Ran for 42050 frames Cell Events: 953 mean_circ: 0.943443
Ran for 43050 frames Cell Events: 980 mean_circ: 0.943428
Ran for 43550 frames Cell Events: 992 mean_circ: 0.943271
Ran for 44050 frames Cell Events: 1007 mean_circ: 0.943332
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Ran for 46550 frames Cell Events: 1074 mean_circ: 0.943148
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Ran for 47550 frames Cell Events: 1099 mean_circ: 0.943202
Ran for 48050 frames Cell Events: 1109 mean_circ: 0.943229
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Ran for 49050 frames Cell Events: 1116 mean_circ: 0.943207
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Ran for 54050 frames Cell Events: 1224 mean_circ: 0.942967
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Ran for 55550 frames Cell Events: 1263 mean_circ: 0.942901
Ran for 56550 frames Cell Events: 1285 mean_circ: 0.942947
Ran for 57550 frames Cell Events: 1319 mean_circ: 0.942807
Ran for 58050 frames Cell Events: 1329 mean_circ: 0.942866
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Ran for 59550 frames Cell Events: 1369 mean_circ: 0.943182
Ran for 60550 frames Cell Events: 1389 mean_circ: 0.943218
Ran for 61050 frames Cell Events: 1399 mean_circ: 0.94312
Ran for 62050 frames Cell Events: 1430 mean_circ: 0.943254
Ran for 62550 frames Cell Events: 1441 mean_circ: 0.943468
Ran for 63550 frames Cell Events: 1477 mean_circ: 0.943366
Ran for 64550 frames Cell Events: 1503 mean_circ: 0.943588
Ran for 65550 frames Cell Events: 1525 mean_circ: 0.943569
Ran for 66050 frames Cell Events: 1540 mean_circ: 0.943511
Ran for 66550 frames Cell Events: 1553 mean_circ: 0.943478
Ran for 67050 frames Cell Events: 1558 mean_circ: 0.94343
Ran for 67550 frames Cell Events: 1564 mean_circ: 0.943475
Ran for 68050 frames Cell Events: 1571 mean_circ: 0.943502
Ran for 69550 frames Cell Events: 1607 mean_circ: 0.943547
Ran for 70050 frames Cell Events: 1616 mean_circ: 0.94363
Ran for 70550 frames Cell Events: 1629 mean_circ: 0.943473
Ran for 71050 frames Cell Events: 1634 mean_circ: 0.943577
Ran for 71550 frames Cell Events: 1653 mean_circ: 0.943266
Ran for 72050 frames Cell Events: 1665 mean_circ: 0.94326
Ran for 72550 frames Cell Events: 1673 mean_circ: 0.943308
Ran for 73050 frames Cell Events: 1681 mean_circ: 0.943363
Ran for 73550 frames Cell Events: 1688 mean_circ: 0.943416
Ran for 74550 frames Cell Events: 1712 mean_circ: 0.943001
Ran for 75050 frames Cell Events: 1724 mean_circ: 0.943063
Ran for 75550 frames Cell Events: 1739 mean_circ: 0.943023
Ran for 76050 frames Cell Events: 1748 mean_circ: 0.942958
Ran for 76550 frames Cell Events: 1760 mean_circ: 0.943073
Ran for 77050 frames Cell Events: 1770 mean_circ: 0.943135
Ran for 77550 frames Cell Events: 1777 mean_circ: 0.943217
Ran for 78050 frames Cell Events: 1789 mean_circ: 0.943337
Ran for 78550 frames Cell Events: 1798 mean_circ: 0.943375
Ran for 79550 frames Cell Events: 1822 mean_circ: 0.943439
Ran for 80050 frames Cell Events: 1829 mean_circ: 0.943465
Ran for 80550 frames Cell Events: 1834 mean_circ: 0.943279
Ran for 81050 frames Cell Events: 1845 mean_circ: 0.943168
Ran for 81550 frames Cell Events: 1857 mean_circ: 0.942884
Ran for 82050 frames Cell Events: 1875 mean_circ: 0.942926
Ran for 82550 frames Cell Events: 1885 mean_circ: 0.943003
Ran for 83050 frames Cell Events: 1893 mean_circ: 0.943003
Ran for 84050 frames Cell Events: 1912 mean_circ: 0.942961
Ran for 85050 frames Cell Events: 1943 mean_circ: 0.943243
Ran for 85550 frames Cell Events: 1953 mean_circ: 0.943353
Ran for 86050 frames Cell Events: 1965 mean_circ: 0.943392
Ran for 86550 frames Cell Events: 1976 mean_circ: 0.94345
Ran for 88550 frames Cell Events: 2045 mean_circ: 0.943586
Ran for 89050 frames Cell Events: 2066 mean_circ: 0.943652
Ran for 89550 frames Cell Events: 2078 mean_circ: 0.943675
Ran for 90550 frames Cell Events: 2103 mean_circ: 0.943728
Ran for 91050 frames Cell Events: 2115 mean_circ: 0.94377
Ran for 91550 frames Cell Events: 2132 mean_circ: 0.943861
Ran for 92050 frames Cell Events: 2143 mean_circ: 0.943865
Ran for 92550 frames Cell Events: 2156 mean_circ: 0.943853
Ran for 93050 frames Cell Events: 2171 mean_circ: 0.943777
Ran for 93550 frames Cell Events: 2186 mean_circ: 0.943753
Ran for 94550 frames Cell Events: 2209 mean_circ: 0.943788
Ran for 95050 frames Cell Events: 2218 mean_circ: 0.943805
Ran for 95550 frames Cell Events: 2229 mean_circ: 0.943826
Ran for 96050 frames Cell Events: 2234 mean_circ: 0.943857
Ran for 96550 frames Cell Events: 2245 mean_circ: 0.943933
Ran for 97050 frames Cell Events: 2269 mean_circ: 0.944029
Ran for 97550 frames Cell Events: 2280 mean_circ: 0.943987
Ran for 98050 frames Cell Events: 2293 mean_circ: 0.943944
Ran for 98550 frames Cell Events: 2303 mean_circ: 0.943847
Ran for 99050 frames Cell Events: 2320 mean_circ: 0.943833
Ran for 99550 frames Cell Events: 2337 mean_circ: 0.943812
Ran for 100050 frames Cell Events: 2350 mean_circ: 0.943913
Ran for 101050 frames Cell Events: 2367 mean_circ: 0.943878
Ran for 101550 frames Cell Events: 2380 mean_circ: 0.943914
Ran for 102050 frames Cell Events: 2398 mean_circ: 0.944043
Ran for 102550 frames Cell Events: 2405 mean_circ: 0.943997
Ran for 103050 frames Cell Events: 2420 mean_circ: 0.944041
Ran for 103550 frames Cell Events: 2442 mean_circ: 0.944102
Ran for 104050 frames Cell Events: 2457 mean_circ: 0.944125
Ran for 104550 frames Cell Events: 2465 mean_circ: 0.944122
Ran for 105550 frames Cell Events: 2491 mean_circ: 0.944098
Ran for 106050 frames Cell Events: 2497 mean_circ: 0.944118
Ran for 106550 frames Cell Events: 2507 mean_circ: 0.944195
Ran for 107050 frames Cell Events: 2520 mean_circ: 0.944213
Ran for 107550 frames Cell Events: 2530 mean_circ: 0.944254
Ran for 108050 frames Cell Events: 2541 mean_circ: 0.944258
Ran for 108550 frames Cell Events: 2565 mean_circ: 0.944136
Ran for 109050 frames Cell Events: 2586 mean_circ: 0.944251
Ran for 109550 frames Cell Events: 2604 mean_circ: 0.944245
Ran for 110050 frames Cell Events: 2617 mean_circ: 0.944244
Ran for 110550 frames Cell Events: 2633 mean_circ: 0.9443
Ran for 111050 frames Cell Events: 2647 mean_circ: 0.944379
Ran for 111550 frames Cell Events: 2665 mean_circ: 0.94436
Ran for 112050 frames Cell Events: 2682 mean_circ: 0.944285
Ran for 112550 frames Cell Events: 2701 mean_circ: 0.944224
Ran for 114050 frames Cell Events: 2744 mean_circ: 0.944279
Ran for 114550 frames Cell Events: 2760 mean_circ: 0.944345
Ran for 115050 frames Cell Events: 2773 mean_circ: 0.944421
Ran for 115550 frames Cell Events: 2780 mean_circ: 0.944452
Ran for 116050 frames Cell Events: 2797 mean_circ: 0.944373
Ran for 116550 frames Cell Events: 2806 mean_circ: 0.944404
Ran for 117050 frames Cell Events: 2820 mean_circ: 0.944331
Ran for 118050 frames Cell Events: 2849 mean_circ: 0.944372
Ran for 118550 frames Cell Events: 2865 mean_circ: 0.944416
Ran for 119050 frames Cell Events: 2879 mean_circ: 0.944425
Ran for 119550 frames Cell Events: 2898 mean_circ: 0.944506
Ran for 120050 frames Cell Events: 2905 mean_circ: 0.944544
Ran for 120550 frames Cell Events: 2918 mean_circ: 0.944574
Ran for 121050 frames Cell Events: 2931 mean_circ: 0.944625
Ran for 121550 frames Cell Events: 2944 mean_circ: 0.944666
Ran for 122050 frames Cell Events: 2966 mean_circ: 0.944805
Ran for 124050 frames Cell Events: 3013 mean_circ: 0.944702
Ran for 124550 frames Cell Events: 3027 mean_circ: 0.944611
Ran for 125050 frames Cell Events: 3036 mean_circ: 0.944678
Ran for 125550 frames Cell Events: 3047 mean_circ: 0.944628
Ran for 126550 frames Cell Events: 3075 mean_circ: 0.94469
Ran for 127050 frames Cell Events: 3087 mean_circ: 0.944734
Ran for 127550 frames Cell Events: 3113 mean_circ: 0.944358
Ran for 128050 frames Cell Events: 3127 mean_circ: 0.944279
Ran for 128550 frames Cell Events: 3141 mean_circ: 0.944234
Ran for 129050 frames Cell Events: 3152 mean_circ: 0.944216
Ran for 130050 frames Cell Events: 3178 mean_circ: 0.944275
Ran for 130550 frames Cell Events: 3188 mean_circ: 0.944308
Ran for 131550 frames Cell Events: 3216 mean_circ: 0.944375
Ran for 132050 frames Cell Events: 3227 mean_circ: 0.944346
Ran for 132550 frames Cell Events: 3238 mean_circ: 0.944358
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Ran for 142050 frames Cell Events: 3495 mean_circ: 0.944499
Ran for 143550 frames Cell Events: 3542 mean_circ: 0.944447
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Ran for 146050 frames Cell Events: 3614 mean_circ: 0.944528
Ran for 146550 frames Cell Events: 3626 mean_circ: 0.944586
Ran for 147550 frames Cell Events: 3653 mean_circ: 0.944539
Ran for 148050 frames Cell Events: 3659 mean_circ: 0.944526
Ran for 148550 frames Cell Events: 3677 mean_circ: 0.94454
Ran for 149550 frames Cell Events: 3726 mean_circ: 0.944483
Ran for 150050 frames Cell Events: 3740 mean_circ: 0.944473
Ran for 151050 frames Cell Events: 3767 mean_circ: 0.944443
Ran for 152550 frames Cell Events: 3809 mean_circ: 0.944476
Ran for 153050 frames Cell Events: 3820 mean_circ: 0.944381
Ran for 153550 frames Cell Events: 3837 mean_circ: 0.944396
Ran for 154050 frames Cell Events: 3850 mean_circ: 0.944448
Ran for 154550 frames Cell Events: 3862 mean_circ: 0.944415
Ran for 155050 frames Cell Events: 3879 mean_circ: 0.944386
Ran for 155550 frames Cell Events: 3892 mean_circ: 0.944396
Ran for 156550 frames Cell Events: 3920 mean_circ: 0.944437
Ran for 157050 frames Cell Events: 3936 mean_circ: 0.944462
Ran for 158050 frames Cell Events: 3976 mean_circ: 0.944377
Ran for 158550 frames Cell Events: 3994 mean_circ: 0.944282
Ran for 159050 frames Cell Events: 4005 mean_circ: 0.944305
Ran for 159550 frames Cell Events: 4017 mean_circ: 0.94434
Ran for 160550 frames Cell Events: 4052 mean_circ: 0.944419
Ran for 161050 frames Cell Events: 4069 mean_circ: 0.944402
Ran for 161550 frames Cell Events: 4090 mean_circ: 0.944375
Ran for 162050 frames Cell Events: 4102 mean_circ: 0.944371
Ran for 164050 frames Cell Events: 4164 mean_circ: 0.944261
Ran for 164550 frames Cell Events: 4173 mean_circ: 0.944279
Ran for 165050 frames Cell Events: 4188 mean_circ: 0.944329
Ran for 165550 frames Cell Events: 4208 mean_circ: 0.944295
Ran for 166050 frames Cell Events: 4217 mean_circ: 0.944281
Ran for 167050 frames Cell Events: 4238 mean_circ: 0.944225
Ran for 167550 frames Cell Events: 4246 mean_circ: 0.944228
Ran for 168550 frames Cell Events: 4277 mean_circ: 0.944251
Ran for 169550 frames Cell Events: 4305 mean_circ: 0.944269
Ran for 170550 frames Cell Events: 4334 mean_circ: 0.94424
Ran for 171050 frames Cell Events: 4351 mean_circ: 0.944255
Ran for 171550 frames Cell Events: 4368 mean_circ: 0.944296
Ran for 172050 frames Cell Events: 4381 mean_circ: 0.944327
Ran for 172550 frames Cell Events: 4388 mean_circ: 0.944354
Ran for 173050 frames Cell Events: 4404 mean_circ: 0.944418
Ran for 173550 frames Cell Events: 4419 mean_circ: 0.944459
Ran for 174050 frames Cell Events: 4430 mean_circ: 0.944381
Ran for 174550 frames Cell Events: 4446 mean_circ: 0.944408
Ran for 175050 frames Cell Events: 4460 mean_circ: 0.944448
Ran for 176050 frames Cell Events: 4486 mean_circ: 0.944468
Ran for 176550 frames Cell Events: 4508 mean_circ: 0.944465
Ran for 177050 frames Cell Events: 4526 mean_circ: 0.944434
Ran for 178050 frames Cell Events: 4578 mean_circ: 0.944413
Ran for 179050 frames Cell Events: 4620 mean_circ: 0.944305
Ran for 179550 frames Cell Events: 4635 mean_circ: 0.944261
Ran for 180050 frames Cell Events: 4659 mean_circ: 0.944251
Ran for 180550 frames Cell Events: 4677 mean_circ: 0.944244
Ran for 181050 frames Cell Events: 4699 mean_circ: 0.944266
Ran for 181550 frames Cell Events: 4721 mean_circ: 0.944291
Ran for 182050 frames Cell Events: 4739 mean_circ: 0.944275
Ran for 182550 frames Cell Events: 4744 mean_circ: 0.944291
Ran for 183550 frames Cell Events: 4767 mean_circ: 0.944315
Ran for 184050 frames Cell Events: 4780 mean_circ: 0.944344
Ran for 184550 frames Cell Events: 4807 mean_circ: 0.944292
Ran for 185550 frames Cell Events: 4844 mean_circ: 0.944201
Ran for 186050 frames Cell Events: 4852 mean_circ: 0.944172
Ran for 186550 frames Cell Events: 4872 mean_circ: 0.944117
Ran for 187050 frames Cell Events: 4882 mean_circ: 0.944096
Ran for 187550 frames Cell Events: 4888 mean_circ: 0.944125
Ran for 188050 frames Cell Events: 4906 mean_circ: 0.944168
Ran for 188550 frames Cell Events: 4924 mean_circ: 0.944177
Ran for 189050 frames Cell Events: 4936 mean_circ: 0.944116
Ran for 189550 frames Cell Events: 4958 mean_circ: 0.94413
Ran for 190050 frames Cell Events: 4970 mean_circ: 0.944092
Ran for 190550 frames Cell Events: 4979 mean_circ: 0.9441
Ran for 191550 frames Cell Events: 4996 mean_circ: 0.944037
Ran for 192050 frames Cell Events: 5005 mean_circ: 0.944064
Ran for 192550 frames Cell Events: 5021 mean_circ: 0.944074
Ran for 193050 frames Cell Events: 5036 mean_circ: 0.944051
Ran for 194550 frames Cell Events: 5089 mean_circ: 0.944047
Ran for 195050 frames Cell Events: 5101 mean_circ: 0.944042
Ran for 195550 frames Cell Events: 5114 mean_circ: 0.944048
Ran for 196050 frames Cell Events: 5131 mean_circ: 0.944021
Ran for 197050 frames Cell Events: 5160 mean_circ: 0.943955
Ran for 197550 frames Cell Events: 5173 mean_circ: 0.943946
Ran for 199050 frames Cell Events: 5204 mean_circ: 0.943975
Ran for 200050 frames Cell Events: 5229 mean_circ: 0.943982
Ran for 200550 frames Cell Events: 5239 mean_circ: 0.943999
Ran for 202050 frames Cell Events: 5293 mean_circ: 0.943904
Ran for 202550 frames Cell Events: 5312 mean_circ: 0.943916
Ran for 203050 frames Cell Events: 5332 mean_circ: 0.943917
Ran for 203550 frames Cell Events: 5346 mean_circ: 0.943954
Ran for 204050 frames Cell Events: 5359 mean_circ: 0.943936
Ran for 205050 frames Cell Events: 5391 mean_circ: 0.943901
Ran for 205550 frames Cell Events: 5410 mean_circ: 0.943928
Ran for 206050 frames Cell Events: 5425 mean_circ: 0.943938
Ran for 206550 frames Cell Events: 5442 mean_circ: 0.943931
Ran for 207050 frames Cell Events: 5462 mean_circ: 0.943925
Ran for 207550 frames Cell Events: 5486 mean_circ: 0.943922
Ran for 209050 frames Cell Events: 5527 mean_circ: 0.944013
Ran for 209550 frames Cell Events: 5542 mean_circ: 0.944023
Ran for 210050 frames Cell Events: 5556 mean_circ: 0.944048
Ran for 210550 frames Cell Events: 5577 mean_circ: 0.944035
Ran for 211550 frames Cell Events: 5608 mean_circ: 0.944054
Ran for 212050 frames Cell Events: 5621 mean_circ: 0.944025
Ran for 212550 frames Cell Events: 5636 mean_circ: 0.944021
Ran for 213050 frames Cell Events: 5649 mean_circ: 0.944023
Ran for 214050 frames Cell Events: 5684 mean_circ: 0.944044
Ran for 214550 frames Cell Events: 5698 mean_circ: 0.943963
Ran for 215050 frames Cell Events: 5710 mean_circ: 0.94399
Ran for 215550 frames Cell Events: 5721 mean_circ: 0.944026
Ran for 217550 frames Cell Events: 5788 mean_circ: 0.943974
Ran for 218050 frames Cell Events: 5799 mean_circ: 0.943988
Ran for 218550 frames Cell Events: 5811 mean_circ: 0.944023
Ran for 219050 frames Cell Events: 5820 mean_circ: 0.944047
Ran for 219550 frames Cell Events: 5831 mean_circ: 0.944049
Ran for 220050 frames Cell Events: 5841 mean_circ: 0.944056
Ran for 221050 frames Cell Events: 5869 mean_circ: 0.94407
Ran for 221550 frames Cell Events: 5885 mean_circ: 0.944059
Ran for 222550 frames Cell Events: 5921 mean_circ: 0.944008
Ran for 223050 frames Cell Events: 5936 mean_circ: 0.944027
Ran for 223550 frames Cell Events: 5953 mean_circ: 0.944022
Ran for 224050 frames Cell Events: 5962 mean_circ: 0.944027
Ran for 224550 frames Cell Events: 5981 mean_circ: 0.944028
Ran for 225550 frames Cell Events: 6004 mean_circ: 0.944089
Ran for 227050 frames Cell Events: 6071 mean_circ: 0.9441
Ran for 227550 frames Cell Events: 6087 mean_circ: 0.944107
Ran for 228050 frames Cell Events: 6097 mean_circ: 0.944097
Ran for 228550 frames Cell Events: 6110 mean_circ: 0.944088
Ran for 229550 frames Cell Events: 6137 mean_circ: 0.944095
Ran for 230050 frames Cell Events: 6144 mean_circ: 0.944064
Ran for 231550 frames Cell Events: 6208 mean_circ: 0.944115
Ran for 232050 frames Cell Events: 6227 mean_circ: 0.944138
Ran for 232550 frames Cell Events: 6242 mean_circ: 0.944131
Ran for 233050 frames Cell Events: 6263 mean_circ: 0.944147
Ran for 233550 frames Cell Events: 6299 mean_circ: 0.944094
Ran for 234050 frames Cell Events: 6310 mean_circ: 0.944114
Ran for 234550 frames Cell Events: 6318 mean_circ: 0.944108
Ran for 235050 frames Cell Events: 6332 mean_circ: 0.944098
Ran for 236050 frames Cell Events: 6369 mean_circ: 0.944086
Ran for 237050 frames Cell Events: 6408 mean_circ: 0.944039
Ran for 238050 frames Cell Events: 6453 mean_circ: 0.944028
Ran for 238550 frames Cell Events: 6469 mean_circ: 0.944015
Ran for 239050 frames Cell Events: 6476 mean_circ: 0.943998
Ran for 239550 frames Cell Events: 6496 mean_circ: 0.944004
Ran for 240550 frames Cell Events: 6533 mean_circ: 0.944022
Ran for 241050 frames Cell Events: 6554 mean_circ: 0.944062
Ran for 241550 frames Cell Events: 6570 mean_circ: 0.944082
Ran for 243050 frames Cell Events: 6607 mean_circ: 0.944033
Ran for 243550 frames Cell Events: 6628 mean_circ: 0.944031
Ran for 244050 frames Cell Events: 6634 mean_circ: 0.944028
Ran for 244550 frames Cell Events: 6639 mean_circ: 0.944024
Ran for 245550 frames Cell Events: 6670 mean_circ: 0.943974
Ran for 246550 frames Cell Events: 6720 mean_circ: 0.94404
Ran for 247550 frames Cell Events: 6759 mean_circ: 0.944027
Ran for 248050 frames Cell Events: 6774 mean_circ: 0.944034
Ran for 248550 frames Cell Events: 6781 mean_circ: 0.944017
Ran for 249050 frames Cell Events: 6792 mean_circ: 0.944026
Ran for 249550 frames Cell Events: 6808 mean_circ: 0.944056
Ran for 250050 frames Cell Events: 6817 mean_circ: 0.944066
Ran for 250550 frames Cell Events: 6824 mean_circ: 0.944042
Ran for 251050 frames Cell Events: 6839 mean_circ: 0.944049
Ran for 251550 frames Cell Events: 6858 mean_circ: 0.944063
Ran for 252050 frames Cell Events: 6872 mean_circ: 0.944048
Ran for 252550 frames Cell Events: 6903 mean_circ: 0.944012
Ran for 253550 frames Cell Events: 6962 mean_circ: 0.943979
Ran for 254050 frames Cell Events: 6976 mean_circ: 0.943958
Ran for 256550 frames Cell Events: 7048 mean_circ: 0.943983
Ran for 257050 frames Cell Events: 7065 mean_circ: 0.943976
Ran for 258050 frames Cell Events: 7101 mean_circ: 0.943982
Ran for 258550 frames Cell Events: 7119 mean_circ: 0.943986
Ran for 259050 frames Cell Events: 7138 mean_circ: 0.943994
Ran for 259550 frames Cell Events: 7156 mean_circ: 0.943999
Ran for 260050 frames Cell Events: 7173 mean_circ: 0.944001
Ran for 261050 frames Cell Events: 7195 mean_circ: 0.944012
Ran for 262050 frames Cell Events: 7219 mean_circ: 0.943975
Ran for 262550 frames Cell Events: 7228 mean_circ: 0.94397
Ran for 263050 frames Cell Events: 7239 mean_circ: 0.943966
Ran for 263550 frames Cell Events: 7254 mean_circ: 0.943967
Ran for 264050 frames Cell Events: 7265 mean_circ: 0.943959
Ran for 265050 frames Cell Events: 7297 mean_circ: 0.944031
Ran for 266050 frames Cell Events: 7326 mean_circ: 0.943975
Ran for 266550 frames Cell Events: 7338 mean_circ: 0.943997
Ran for 267050 frames Cell Events: 7358 mean_circ: 0.943951
Ran for 267550 frames Cell Events: 7368 mean_circ: 0.943978
Ran for 268050 frames Cell Events: 7383 mean_circ: 0.943968
Ran for 268550 frames Cell Events: 7411 mean_circ: 0.943946
Ran for 270550 frames Cell Events: 7497 mean_circ: 0.943862
Ran for 271050 frames Cell Events: 7515 mean_circ: 0.943898
Ran for 271550 frames Cell Events: 7535 mean_circ: 0.943866
Ran for 273550 frames Cell Events: 7597 mean_circ: 0.943859
Ran for 274050 frames Cell Events: 7613 mean_circ: 0.943897
Ran for 275050 frames Cell Events: 7634 mean_circ: 0.9439
Ran for 275550 frames Cell Events: 7650 mean_circ: 0.943899
Ran for 276050 frames Cell Events: 7664 mean_circ: 0.943898
Ran for 276550 frames Cell Events: 7679 mean_circ: 0.943855
Ran for 277050 frames Cell Events: 7687 mean_circ: 0.943873
Ran for 278550 frames Cell Events: 7735 mean_circ: 0.943891
Ran for 279050 frames Cell Events: 7748 mean_circ: 0.943889
Ran for 279550 frames Cell Events: 7758 mean_circ: 0.9439
Ran for 280550 frames Cell Events: 7787 mean_circ: 0.943873
Ran for 281050 frames Cell Events: 7805 mean_circ: 0.943886
Ran for 281550 frames Cell Events: 7821 mean_circ: 0.943864
Ran for 282050 frames Cell Events: 7836 mean_circ: 0.943893
Ran for 283550 frames Cell Events: 7885 mean_circ: 0.943847
Ran for 284050 frames Cell Events: 7900 mean_circ: 0.943847
Ran for 284550 frames Cell Events: 7914 mean_circ: 0.943874
Ran for 285050 frames Cell Events: 7936 mean_circ: 0.943871
Ran for 287050 frames Cell Events: 7997 mean_circ: 0.943814
Ran for 287550 frames Cell Events: 8012 mean_circ: 0.943842



End this measurment..



Stopping time: 5.46833e+008
****************************************
Measurement finished

Mean Circularitiy: 0.943852
Mean Area: 595.765
Mean FL-1 intensity: 3431.35
Mean FL-2 intensity: 3993.54
Mean FL-3 intensity: 0

frames processed: 287651
Total Time: 144025ms
Number of Runs (new bg img) 0
Frames collected: 287939
Skipped frames: 29809
Rescued Frames: 1452351
Samples DAQ: 71984891
Samples written: 143969624
Samples per Channel: 71984812
FPS: 1999.22

Samples per second: 499806
Expected samples/s: 500000

Events: 8024
Events per second: 55.7124
jumped back (PMT): 5097
#Frames read, frequency
# 0 frames :388230
# 1 frames :169453
# 2 frames :4872
# 3 frames :2275
# 4 frames :1011
# 5 frames :409
# 6 frames :1523
# 7 frames :1721
# 8 frames :1124
# 9 frames :666
# 10 frames :1433
# 11 frames :795
# 12 frames :589
# 13 frames :374
# 14 frames :254
# 15 frames :187
# 16 frames :178
# 17 frames :130
# 18 frames :93
# 19 frames :71
# 20 frames :61
# 21 frames :62
# 22 frames :52
# 23 frames :43
# 24 frames :25
# 25 frames :22
# 26 frames :22
# 27 frames :11
# 28 frames :10
# 29 frames :7
# 30 frames :13
# 31 frames :8
# 32 frames :4
# 33 frames :13
# 34 frames :4
# 35 frames :6
# 36 frames :9
# 37 frames :1
# 38 frames :2
# 39 frames :3
# 40 frames :5
# 41 frames :4
# 42 frames :4
# 43 frames :1
# 47 frames :1
# 48 frames :1
# 52 frames :1
# 55 frames :1
# 58 frames :1
# 61 frames :1
# 62 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.8788
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0