Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-09_19.01.51 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "fa3359c4cc5188f5018a471820a3a8be",
"name": "M1_20170521_1715_dsRNA_B2_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "17:02:20"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8027 (max 8028) in '8027'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.0665
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 5.50369e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 21 mean_circ: 0.929783
Ran for 1050 frames Cell Events: 42 mean_circ: 0.916277
Ran for 1550 frames Cell Events: 56 mean_circ: 0.917344
Ran for 2050 frames Cell Events: 67 mean_circ: 0.918283
Ran for 2550 frames Cell Events: 81 mean_circ: 0.923631
Ran for 3050 frames Cell Events: 96 mean_circ: 0.923983
Ran for 4050 frames Cell Events: 129 mean_circ: 0.926385
Ran for 4550 frames Cell Events: 137 mean_circ: 0.927472
Ran for 5050 frames Cell Events: 154 mean_circ: 0.927421
Ran for 6550 frames Cell Events: 212 mean_circ: 0.931856
Ran for 7050 frames Cell Events: 230 mean_circ: 0.931876
Ran for 8550 frames Cell Events: 283 mean_circ: 0.930961
Ran for 9050 frames Cell Events: 294 mean_circ: 0.931509
Ran for 9550 frames Cell Events: 309 mean_circ: 0.933189
Ran for 10050 frames Cell Events: 333 mean_circ: 0.931848
Ran for 11050 frames Cell Events: 360 mean_circ: 0.932538
Ran for 12050 frames Cell Events: 380 mean_circ: 0.932983
Ran for 12550 frames Cell Events: 401 mean_circ: 0.933531
Ran for 13050 frames Cell Events: 415 mean_circ: 0.933477
Ran for 13550 frames Cell Events: 424 mean_circ: 0.933482
Ran for 14050 frames Cell Events: 435 mean_circ: 0.933111
Ran for 14550 frames Cell Events: 457 mean_circ: 0.933205
Ran for 15050 frames Cell Events: 483 mean_circ: 0.933499
Ran for 15550 frames Cell Events: 503 mean_circ: 0.932665
Ran for 16050 frames Cell Events: 514 mean_circ: 0.932671
Ran for 16550 frames Cell Events: 539 mean_circ: 0.930838
Ran for 17050 frames Cell Events: 552 mean_circ: 0.930023
Ran for 18050 frames Cell Events: 601 mean_circ: 0.930456
Ran for 19050 frames Cell Events: 629 mean_circ: 0.930837
Ran for 19550 frames Cell Events: 638 mean_circ: 0.931174
Ran for 20050 frames Cell Events: 659 mean_circ: 0.931135
Ran for 21050 frames Cell Events: 696 mean_circ: 0.931084
Ran for 21550 frames Cell Events: 720 mean_circ: 0.931212
Ran for 22050 frames Cell Events: 730 mean_circ: 0.930941
Ran for 22550 frames Cell Events: 747 mean_circ: 0.931439
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Ran for 25550 frames Cell Events: 839 mean_circ: 0.93163
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Ran for 26550 frames Cell Events: 864 mean_circ: 0.932259
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Ran for 27550 frames Cell Events: 899 mean_circ: 0.932488
Ran for 28550 frames Cell Events: 949 mean_circ: 0.93215
Ran for 29050 frames Cell Events: 972 mean_circ: 0.932407
Ran for 29550 frames Cell Events: 989 mean_circ: 0.932202
Ran for 30550 frames Cell Events: 1036 mean_circ: 0.932642
Ran for 32050 frames Cell Events: 1097 mean_circ: 0.932119
Ran for 32550 frames Cell Events: 1113 mean_circ: 0.931938
Ran for 33050 frames Cell Events: 1125 mean_circ: 0.932094
Ran for 33550 frames Cell Events: 1142 mean_circ: 0.932139
Ran for 34550 frames Cell Events: 1165 mean_circ: 0.932439
Ran for 35050 frames Cell Events: 1179 mean_circ: 0.932562
Ran for 35550 frames Cell Events: 1194 mean_circ: 0.932351
Ran for 36050 frames Cell Events: 1209 mean_circ: 0.932414
Ran for 37050 frames Cell Events: 1252 mean_circ: 0.932277
Ran for 37550 frames Cell Events: 1284 mean_circ: 0.932248
Ran for 38050 frames Cell Events: 1295 mean_circ: 0.932117
Ran for 39050 frames Cell Events: 1337 mean_circ: 0.932103
Ran for 40050 frames Cell Events: 1375 mean_circ: 0.931995
Ran for 40550 frames Cell Events: 1395 mean_circ: 0.931975
Ran for 41050 frames Cell Events: 1408 mean_circ: 0.931965
Ran for 41550 frames Cell Events: 1415 mean_circ: 0.932021
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Ran for 43050 frames Cell Events: 1452 mean_circ: 0.931965
Ran for 44050 frames Cell Events: 1483 mean_circ: 0.93168
Ran for 45050 frames Cell Events: 1518 mean_circ: 0.932108
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Ran for 46550 frames Cell Events: 1565 mean_circ: 0.932469
Ran for 47050 frames Cell Events: 1584 mean_circ: 0.932691
Ran for 47550 frames Cell Events: 1597 mean_circ: 0.932783
Ran for 48050 frames Cell Events: 1618 mean_circ: 0.932685
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Ran for 54550 frames Cell Events: 1862 mean_circ: 0.932598
Ran for 56550 frames Cell Events: 1934 mean_circ: 0.932414
Ran for 57050 frames Cell Events: 1947 mean_circ: 0.932434
Ran for 58050 frames Cell Events: 1973 mean_circ: 0.932463
Ran for 59550 frames Cell Events: 2013 mean_circ: 0.932439
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Ran for 61050 frames Cell Events: 2069 mean_circ: 0.932448
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Ran for 62550 frames Cell Events: 2105 mean_circ: 0.932501
Ran for 63050 frames Cell Events: 2122 mean_circ: 0.932278
Ran for 63550 frames Cell Events: 2133 mean_circ: 0.932251
Ran for 66050 frames Cell Events: 2255 mean_circ: 0.932085
Ran for 66550 frames Cell Events: 2268 mean_circ: 0.932007
Ran for 67050 frames Cell Events: 2278 mean_circ: 0.931874
Ran for 67550 frames Cell Events: 2294 mean_circ: 0.93188
Ran for 68050 frames Cell Events: 2317 mean_circ: 0.931653
Ran for 69050 frames Cell Events: 2352 mean_circ: 0.931634
Ran for 69550 frames Cell Events: 2372 mean_circ: 0.931542
Ran for 70050 frames Cell Events: 2398 mean_circ: 0.931786
Ran for 70550 frames Cell Events: 2412 mean_circ: 0.931861
Ran for 71050 frames Cell Events: 2429 mean_circ: 0.931829
Ran for 71550 frames Cell Events: 2438 mean_circ: 0.931815
Ran for 72050 frames Cell Events: 2453 mean_circ: 0.931841
Ran for 72550 frames Cell Events: 2477 mean_circ: 0.931934
Ran for 73050 frames Cell Events: 2492 mean_circ: 0.931991
Ran for 73550 frames Cell Events: 2507 mean_circ: 0.931951
Ran for 74050 frames Cell Events: 2528 mean_circ: 0.93195
Ran for 77050 frames Cell Events: 2668 mean_circ: 0.931959
Ran for 77550 frames Cell Events: 2687 mean_circ: 0.931964
Ran for 78050 frames Cell Events: 2709 mean_circ: 0.931973
Ran for 79050 frames Cell Events: 2737 mean_circ: 0.932125
Ran for 79550 frames Cell Events: 2760 mean_circ: 0.932219
Ran for 80550 frames Cell Events: 2808 mean_circ: 0.93213
Ran for 81550 frames Cell Events: 2845 mean_circ: 0.932271
Ran for 82050 frames Cell Events: 2859 mean_circ: 0.932343
Ran for 82550 frames Cell Events: 2869 mean_circ: 0.932395
Ran for 83050 frames Cell Events: 2883 mean_circ: 0.932329
Ran for 83550 frames Cell Events: 2898 mean_circ: 0.932396
Ran for 84050 frames Cell Events: 2919 mean_circ: 0.93232
Ran for 84550 frames Cell Events: 2935 mean_circ: 0.9321
Ran for 85050 frames Cell Events: 2956 mean_circ: 0.932063
Ran for 85550 frames Cell Events: 2983 mean_circ: 0.931824
Ran for 86550 frames Cell Events: 3019 mean_circ: 0.931848
Ran for 87550 frames Cell Events: 3054 mean_circ: 0.931806
Ran for 88050 frames Cell Events: 3073 mean_circ: 0.931931
Ran for 88550 frames Cell Events: 3089 mean_circ: 0.931974
Ran for 89050 frames Cell Events: 3105 mean_circ: 0.931863
Ran for 89550 frames Cell Events: 3126 mean_circ: 0.931889
Ran for 90050 frames Cell Events: 3158 mean_circ: 0.931944
Ran for 90550 frames Cell Events: 3177 mean_circ: 0.931917
Ran for 91050 frames Cell Events: 3191 mean_circ: 0.931976
Ran for 91550 frames Cell Events: 3216 mean_circ: 0.932029
Ran for 92050 frames Cell Events: 3235 mean_circ: 0.931986
Ran for 92550 frames Cell Events: 3260 mean_circ: 0.932037
Ran for 93050 frames Cell Events: 3277 mean_circ: 0.932142
Ran for 93550 frames Cell Events: 3295 mean_circ: 0.932133
Ran for 95550 frames Cell Events: 3365 mean_circ: 0.932281
Ran for 96550 frames Cell Events: 3395 mean_circ: 0.93222
Ran for 97050 frames Cell Events: 3420 mean_circ: 0.932195
Ran for 98050 frames Cell Events: 3457 mean_circ: 0.932307
Ran for 98550 frames Cell Events: 3468 mean_circ: 0.932297
Ran for 99550 frames Cell Events: 3497 mean_circ: 0.932319
Ran for 100050 frames Cell Events: 3508 mean_circ: 0.932252
Ran for 100550 frames Cell Events: 3527 mean_circ: 0.932363
Ran for 101050 frames Cell Events: 3542 mean_circ: 0.932469
Ran for 101550 frames Cell Events: 3560 mean_circ: 0.932378
Ran for 103050 frames Cell Events: 3611 mean_circ: 0.932428
Ran for 103550 frames Cell Events: 3622 mean_circ: 0.932449
Ran for 105050 frames Cell Events: 3670 mean_circ: 0.932446
Ran for 105550 frames Cell Events: 3688 mean_circ: 0.932411
Ran for 106050 frames Cell Events: 3701 mean_circ: 0.93236
Ran for 106550 frames Cell Events: 3723 mean_circ: 0.932309
Ran for 107550 frames Cell Events: 3754 mean_circ: 0.932285
Ran for 108050 frames Cell Events: 3770 mean_circ: 0.932303
Ran for 108550 frames Cell Events: 3788 mean_circ: 0.932337
Ran for 109050 frames Cell Events: 3804 mean_circ: 0.932327
Ran for 109550 frames Cell Events: 3815 mean_circ: 0.932315
Ran for 110550 frames Cell Events: 3854 mean_circ: 0.932245
Ran for 111550 frames Cell Events: 3897 mean_circ: 0.932367
Ran for 112050 frames Cell Events: 3915 mean_circ: 0.932398
Ran for 112550 frames Cell Events: 3935 mean_circ: 0.932443
Ran for 114050 frames Cell Events: 3994 mean_circ: 0.932385
Ran for 114550 frames Cell Events: 4008 mean_circ: 0.932489
Ran for 115050 frames Cell Events: 4022 mean_circ: 0.932452
Ran for 115550 frames Cell Events: 4033 mean_circ: 0.932533
Ran for 116050 frames Cell Events: 4044 mean_circ: 0.932568
Ran for 116550 frames Cell Events: 4056 mean_circ: 0.932632
Ran for 118050 frames Cell Events: 4115 mean_circ: 0.932474
Ran for 118550 frames Cell Events: 4136 mean_circ: 0.932475
Ran for 119050 frames Cell Events: 4155 mean_circ: 0.932507
Ran for 119550 frames Cell Events: 4181 mean_circ: 0.9326
Ran for 120550 frames Cell Events: 4214 mean_circ: 0.932637
Ran for 121050 frames Cell Events: 4237 mean_circ: 0.932702
Ran for 121550 frames Cell Events: 4254 mean_circ: 0.932682
Ran for 122050 frames Cell Events: 4282 mean_circ: 0.932775
Ran for 122550 frames Cell Events: 4305 mean_circ: 0.932815
Ran for 123550 frames Cell Events: 4356 mean_circ: 0.932756
Ran for 124050 frames Cell Events: 4370 mean_circ: 0.932828
Ran for 126050 frames Cell Events: 4440 mean_circ: 0.932876
Ran for 126550 frames Cell Events: 4460 mean_circ: 0.932881
Ran for 127550 frames Cell Events: 4494 mean_circ: 0.932892
Ran for 128550 frames Cell Events: 4533 mean_circ: 0.932896
Ran for 129050 frames Cell Events: 4546 mean_circ: 0.932868
Ran for 129550 frames Cell Events: 4557 mean_circ: 0.932905
Ran for 130050 frames Cell Events: 4577 mean_circ: 0.932858
Ran for 130550 frames Cell Events: 4589 mean_circ: 0.932872
Ran for 131050 frames Cell Events: 4608 mean_circ: 0.932918
Ran for 131550 frames Cell Events: 4623 mean_circ: 0.932903
Ran for 133050 frames Cell Events: 4676 mean_circ: 0.933039
Ran for 133550 frames Cell Events: 4691 mean_circ: 0.933093
Ran for 134050 frames Cell Events: 4710 mean_circ: 0.933139
Ran for 134550 frames Cell Events: 4730 mean_circ: 0.933172
Ran for 135050 frames Cell Events: 4750 mean_circ: 0.933102
Ran for 135550 frames Cell Events: 4767 mean_circ: 0.933068
Ran for 136050 frames Cell Events: 4784 mean_circ: 0.933089
Ran for 136550 frames Cell Events: 4797 mean_circ: 0.933094
Ran for 137050 frames Cell Events: 4807 mean_circ: 0.933122
Ran for 138050 frames Cell Events: 4843 mean_circ: 0.933145
Ran for 138550 frames Cell Events: 4861 mean_circ: 0.933184
Ran for 139550 frames Cell Events: 4893 mean_circ: 0.933248
Ran for 140550 frames Cell Events: 4927 mean_circ: 0.933246
Ran for 142550 frames Cell Events: 5018 mean_circ: 0.933123
Ran for 143050 frames Cell Events: 5036 mean_circ: 0.933201
Ran for 143550 frames Cell Events: 5054 mean_circ: 0.933208
Ran for 144050 frames Cell Events: 5078 mean_circ: 0.933192
Ran for 144550 frames Cell Events: 5096 mean_circ: 0.933189
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Ran for 145550 frames Cell Events: 5126 mean_circ: 0.933254
Ran for 146050 frames Cell Events: 5138 mean_circ: 0.933216
Ran for 146550 frames Cell Events: 5148 mean_circ: 0.933177
Ran for 147050 frames Cell Events: 5160 mean_circ: 0.933202
Ran for 147550 frames Cell Events: 5177 mean_circ: 0.933177
Ran for 148050 frames Cell Events: 5190 mean_circ: 0.933205
Ran for 148550 frames Cell Events: 5205 mean_circ: 0.933191
Ran for 149050 frames Cell Events: 5219 mean_circ: 0.933185
Ran for 149550 frames Cell Events: 5243 mean_circ: 0.933146
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Ran for 150550 frames Cell Events: 5289 mean_circ: 0.933139
Ran for 151050 frames Cell Events: 5303 mean_circ: 0.933134
Ran for 151550 frames Cell Events: 5312 mean_circ: 0.93316
Ran for 152050 frames Cell Events: 5327 mean_circ: 0.933171
Ran for 153050 frames Cell Events: 5371 mean_circ: 0.93325
Ran for 153550 frames Cell Events: 5378 mean_circ: 0.933249
Ran for 154050 frames Cell Events: 5387 mean_circ: 0.93327
Ran for 154550 frames Cell Events: 5398 mean_circ: 0.933232
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Ran for 156550 frames Cell Events: 5465 mean_circ: 0.932753
Ran for 157050 frames Cell Events: 5482 mean_circ: 0.932611
Ran for 158550 frames Cell Events: 5535 mean_circ: 0.932677
Ran for 159550 frames Cell Events: 5571 mean_circ: 0.932734
Ran for 160050 frames Cell Events: 5599 mean_circ: 0.932704
Ran for 161050 frames Cell Events: 5637 mean_circ: 0.932688
Ran for 161550 frames Cell Events: 5662 mean_circ: 0.932671
Ran for 164050 frames Cell Events: 5736 mean_circ: 0.932665
Ran for 164550 frames Cell Events: 5754 mean_circ: 0.932638
Ran for 166050 frames Cell Events: 5810 mean_circ: 0.932613
Ran for 166550 frames Cell Events: 5828 mean_circ: 0.932652
Ran for 167050 frames Cell Events: 5839 mean_circ: 0.93273
Ran for 168050 frames Cell Events: 5864 mean_circ: 0.932744
Ran for 168550 frames Cell Events: 5882 mean_circ: 0.932804
Ran for 169050 frames Cell Events: 5891 mean_circ: 0.93279
Ran for 169550 frames Cell Events: 5912 mean_circ: 0.932826
Ran for 170050 frames Cell Events: 5926 mean_circ: 0.932797
Ran for 170550 frames Cell Events: 5944 mean_circ: 0.93277
Ran for 171050 frames Cell Events: 5965 mean_circ: 0.932805
Ran for 171550 frames Cell Events: 5995 mean_circ: 0.93286
Ran for 172050 frames Cell Events: 6005 mean_circ: 0.932884
Ran for 172550 frames Cell Events: 6019 mean_circ: 0.932864
Ran for 173050 frames Cell Events: 6032 mean_circ: 0.932881
Ran for 173550 frames Cell Events: 6050 mean_circ: 0.932917
Ran for 174550 frames Cell Events: 6095 mean_circ: 0.932941
Ran for 175050 frames Cell Events: 6121 mean_circ: 0.933005
Ran for 176550 frames Cell Events: 6173 mean_circ: 0.933095
Ran for 177050 frames Cell Events: 6185 mean_circ: 0.933093
Ran for 179550 frames Cell Events: 6289 mean_circ: 0.932978
Ran for 180050 frames Cell Events: 6315 mean_circ: 0.932937
Ran for 182050 frames Cell Events: 6376 mean_circ: 0.932907
Ran for 182550 frames Cell Events: 6382 mean_circ: 0.93296
Ran for 183050 frames Cell Events: 6397 mean_circ: 0.932876
Ran for 183550 frames Cell Events: 6414 mean_circ: 0.9329
Ran for 184550 frames Cell Events: 6451 mean_circ: 0.932805
Ran for 186050 frames Cell Events: 6496 mean_circ: 0.932863
Ran for 186550 frames Cell Events: 6511 mean_circ: 0.932878
Ran for 187050 frames Cell Events: 6521 mean_circ: 0.932886
Ran for 187550 frames Cell Events: 6540 mean_circ: 0.932855
Ran for 188050 frames Cell Events: 6556 mean_circ: 0.932936
Ran for 188550 frames Cell Events: 6575 mean_circ: 0.932965
Ran for 189050 frames Cell Events: 6615 mean_circ: 0.932976
Ran for 190050 frames Cell Events: 6642 mean_circ: 0.932884
Ran for 190550 frames Cell Events: 6654 mean_circ: 0.932938
Ran for 191550 frames Cell Events: 6693 mean_circ: 0.932932
Ran for 192050 frames Cell Events: 6699 mean_circ: 0.932853
Ran for 192550 frames Cell Events: 6714 mean_circ: 0.932874
Ran for 193050 frames Cell Events: 6731 mean_circ: 0.932859
Ran for 193550 frames Cell Events: 6748 mean_circ: 0.932898
Ran for 194050 frames Cell Events: 6764 mean_circ: 0.932852
Ran for 195050 frames Cell Events: 6800 mean_circ: 0.932896
Ran for 195550 frames Cell Events: 6827 mean_circ: 0.932855
Ran for 196550 frames Cell Events: 6866 mean_circ: 0.93287
Ran for 197050 frames Cell Events: 6885 mean_circ: 0.932844
Ran for 197550 frames Cell Events: 6900 mean_circ: 0.93288
Ran for 198050 frames Cell Events: 6915 mean_circ: 0.932911
Ran for 198550 frames Cell Events: 6933 mean_circ: 0.93292
Ran for 199050 frames Cell Events: 6950 mean_circ: 0.932843
Ran for 199550 frames Cell Events: 6963 mean_circ: 0.93286
Ran for 200050 frames Cell Events: 6984 mean_circ: 0.932848
Ran for 200550 frames Cell Events: 6997 mean_circ: 0.932866
Ran for 201550 frames Cell Events: 7026 mean_circ: 0.9329
Ran for 202050 frames Cell Events: 7048 mean_circ: 0.932904
Ran for 202550 frames Cell Events: 7060 mean_circ: 0.932899
Ran for 203550 frames Cell Events: 7100 mean_circ: 0.932939
Ran for 204050 frames Cell Events: 7112 mean_circ: 0.932933
Ran for 204550 frames Cell Events: 7128 mean_circ: 0.93295
Ran for 205050 frames Cell Events: 7144 mean_circ: 0.932941
Ran for 206550 frames Cell Events: 7203 mean_circ: 0.932889
Ran for 207050 frames Cell Events: 7218 mean_circ: 0.932879
Ran for 208050 frames Cell Events: 7254 mean_circ: 0.932895
Ran for 208550 frames Cell Events: 7277 mean_circ: 0.932888
Ran for 209050 frames Cell Events: 7288 mean_circ: 0.932918
Ran for 209550 frames Cell Events: 7306 mean_circ: 0.932973
Ran for 210050 frames Cell Events: 7322 mean_circ: 0.93299
Ran for 210550 frames Cell Events: 7339 mean_circ: 0.932966
Ran for 211050 frames Cell Events: 7362 mean_circ: 0.932978
Ran for 212050 frames Cell Events: 7395 mean_circ: 0.932968
Ran for 213050 frames Cell Events: 7449 mean_circ: 0.933013
Ran for 213550 frames Cell Events: 7472 mean_circ: 0.932955
Ran for 214550 frames Cell Events: 7509 mean_circ: 0.93293
Ran for 215550 frames Cell Events: 7544 mean_circ: 0.93289
Ran for 216050 frames Cell Events: 7556 mean_circ: 0.932847
Ran for 216550 frames Cell Events: 7570 mean_circ: 0.932836
Ran for 217050 frames Cell Events: 7579 mean_circ: 0.932798
Ran for 217550 frames Cell Events: 7593 mean_circ: 0.932788
Ran for 218050 frames Cell Events: 7599 mean_circ: 0.932821
Ran for 219050 frames Cell Events: 7638 mean_circ: 0.932831
Ran for 220550 frames Cell Events: 7712 mean_circ: 0.932788
Ran for 224550 frames Cell Events: 7878 mean_circ: 0.93277
Ran for 225050 frames Cell Events: 7894 mean_circ: 0.932769
Ran for 225550 frames Cell Events: 7911 mean_circ: 0.932809
Ran for 226050 frames Cell Events: 7923 mean_circ: 0.932839
Ran for 226550 frames Cell Events: 7944 mean_circ: 0.932846
Ran for 227050 frames Cell Events: 7962 mean_circ: 0.932871
Ran for 227550 frames Cell Events: 7980 mean_circ: 0.93287
Ran for 228550 frames Cell Events: 8011 mean_circ: 0.932871



End this measurment..



Stopping time: 5.50484e+008
****************************************
Measurement finished

Mean Circularitiy: 0.932842
Mean Area: 608.435
Mean FL-1 intensity: 2711.46
Mean FL-2 intensity: 3595.34
Mean FL-3 intensity: 0

frames processed: 227484
Total Time: 114500ms
Number of Runs (new bg img) 0
Frames collected: 228850
Skipped frames: 48525
Rescued Frames: 2347766
Samples DAQ: 57212740
Samples written: 114424886
Samples per Channel: 57212443
FPS: 1998.69

Samples per second: 499671
Expected samples/s: 500000

Events: 8028
Events per second: 70.1134
jumped back (PMT): 5407
#Frames read, frequency
# 0 frames :305941
# 1 frames :136108
# 2 frames :4674
# 3 frames :1351
# 4 frames :545
# 5 frames :159
# 6 frames :3282
# 7 frames :1685
# 8 frames :1166
# 9 frames :502
# 10 frames :570
# 11 frames :264
# 12 frames :342
# 13 frames :210
# 14 frames :210
# 15 frames :133
# 16 frames :102
# 17 frames :81
# 18 frames :51
# 19 frames :31
# 20 frames :35
# 21 frames :33
# 22 frames :19
# 23 frames :15
# 24 frames :14
# 25 frames :11
# 26 frames :12
# 27 frames :11
# 28 frames :9
# 29 frames :1
# 30 frames :4
# 31 frames :4
# 32 frames :2
# 33 frames :3
# 34 frames :5
# 35 frames :4
# 36 frames :2
# 38 frames :1
# 39 frames :2
# 41 frames :2
# 42 frames :1
# 45 frames :1
# 47 frames :1
# 53 frames :1
# 62 frames :2
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.0665
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0