Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-09_19.31.30 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "604c8a258b34ff8f85c132a916a951e6",
"name": "M1_20170522_1559_dsRNA_C5_fast.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "17:31:55"
}
}
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.8134
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 6.32181e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.946826
Ran for 550 frames Cell Events: 13 mean_circ: 0.938754
Ran for 1550 frames Cell Events: 47 mean_circ: 0.93548
Ran for 2050 frames Cell Events: 79 mean_circ: 0.928573
Ran for 2550 frames Cell Events: 90 mean_circ: 0.930079
Ran for 3050 frames Cell Events: 113 mean_circ: 0.931314
Ran for 3550 frames Cell Events: 135 mean_circ: 0.932177
Ran for 4550 frames Cell Events: 178 mean_circ: 0.93053
Ran for 5550 frames Cell Events: 218 mean_circ: 0.930306
Ran for 6050 frames Cell Events: 233 mean_circ: 0.930525
Ran for 6550 frames Cell Events: 251 mean_circ: 0.930375
Ran for 7550 frames Cell Events: 285 mean_circ: 0.931359
Ran for 8550 frames Cell Events: 325 mean_circ: 0.932534
Ran for 9050 frames Cell Events: 344 mean_circ: 0.932461
Ran for 9550 frames Cell Events: 356 mean_circ: 0.931651
Ran for 10550 frames Cell Events: 408 mean_circ: 0.93168
Ran for 12050 frames Cell Events: 474 mean_circ: 0.932265
Ran for 12550 frames Cell Events: 493 mean_circ: 0.932705
Ran for 13050 frames Cell Events: 512 mean_circ: 0.933005
Ran for 14050 frames Cell Events: 540 mean_circ: 0.93283
Ran for 14550 frames Cell Events: 560 mean_circ: 0.933107
Ran for 15050 frames Cell Events: 574 mean_circ: 0.933473
Ran for 16050 frames Cell Events: 612 mean_circ: 0.93353
Ran for 17550 frames Cell Events: 674 mean_circ: 0.933584
Ran for 19550 frames Cell Events: 753 mean_circ: 0.932927
Ran for 20050 frames Cell Events: 770 mean_circ: 0.932821
Ran for 20550 frames Cell Events: 789 mean_circ: 0.933065
Ran for 21550 frames Cell Events: 826 mean_circ: 0.932942
Ran for 22550 frames Cell Events: 853 mean_circ: 0.932907
Ran for 23050 frames Cell Events: 865 mean_circ: 0.932844
Ran for 24050 frames Cell Events: 900 mean_circ: 0.933288
Ran for 24550 frames Cell Events: 922 mean_circ: 0.933194
Ran for 25550 frames Cell Events: 961 mean_circ: 0.93353
Ran for 26050 frames Cell Events: 978 mean_circ: 0.933699
Ran for 29050 frames Cell Events: 1068 mean_circ: 0.933128
Ran for 29550 frames Cell Events: 1083 mean_circ: 0.933252
Ran for 30050 frames Cell Events: 1106 mean_circ: 0.93335
Ran for 30550 frames Cell Events: 1118 mean_circ: 0.933014
Ran for 32050 frames Cell Events: 1172 mean_circ: 0.933574
Ran for 33550 frames Cell Events: 1235 mean_circ: 0.934061
Ran for 34550 frames Cell Events: 1249 mean_circ: 0.933884
Ran for 35050 frames Cell Events: 1270 mean_circ: 0.934087
Ran for 36050 frames Cell Events: 1311 mean_circ: 0.934176
Ran for 36550 frames Cell Events: 1327 mean_circ: 0.93424
Ran for 37050 frames Cell Events: 1342 mean_circ: 0.934
Ran for 37550 frames Cell Events: 1355 mean_circ: 0.933954
Ran for 38050 frames Cell Events: 1376 mean_circ: 0.933934
Ran for 38550 frames Cell Events: 1394 mean_circ: 0.933966
Ran for 41050 frames Cell Events: 1503 mean_circ: 0.93383
Ran for 41550 frames Cell Events: 1524 mean_circ: 0.933963
Ran for 42050 frames Cell Events: 1544 mean_circ: 0.933773
Ran for 42550 frames Cell Events: 1559 mean_circ: 0.93387
Ran for 43050 frames Cell Events: 1579 mean_circ: 0.93365
Ran for 43550 frames Cell Events: 1595 mean_circ: 0.933788
Ran for 44550 frames Cell Events: 1635 mean_circ: 0.934014
Ran for 45550 frames Cell Events: 1680 mean_circ: 0.933866
Ran for 46050 frames Cell Events: 1693 mean_circ: 0.933974
Ran for 46550 frames Cell Events: 1707 mean_circ: 0.933998
Ran for 47550 frames Cell Events: 1748 mean_circ: 0.933865
Ran for 48050 frames Cell Events: 1763 mean_circ: 0.93391
Ran for 48550 frames Cell Events: 1775 mean_circ: 0.93386
Ran for 50550 frames Cell Events: 1857 mean_circ: 0.934156
Ran for 51050 frames Cell Events: 1872 mean_circ: 0.934165
Ran for 51550 frames Cell Events: 1895 mean_circ: 0.934096
Ran for 52050 frames Cell Events: 1911 mean_circ: 0.934149
Ran for 53050 frames Cell Events: 1939 mean_circ: 0.933846
Ran for 53550 frames Cell Events: 1957 mean_circ: 0.933824
Ran for 54050 frames Cell Events: 1969 mean_circ: 0.933874
Ran for 54550 frames Cell Events: 1986 mean_circ: 0.933719
Ran for 55050 frames Cell Events: 2004 mean_circ: 0.933637
Ran for 55550 frames Cell Events: 2017 mean_circ: 0.933697
Ran for 56050 frames Cell Events: 2037 mean_circ: 0.933429
Ran for 56550 frames Cell Events: 2053 mean_circ: 0.93329
Ran for 57050 frames Cell Events: 2067 mean_circ: 0.933226
Ran for 58050 frames Cell Events: 2107 mean_circ: 0.93328
Ran for 58550 frames Cell Events: 2116 mean_circ: 0.933217
Ran for 60050 frames Cell Events: 2175 mean_circ: 0.93332
Ran for 60550 frames Cell Events: 2194 mean_circ: 0.933463
Ran for 61050 frames Cell Events: 2217 mean_circ: 0.933619
Ran for 61550 frames Cell Events: 2239 mean_circ: 0.933705
Ran for 62550 frames Cell Events: 2270 mean_circ: 0.93358
Ran for 63050 frames Cell Events: 2284 mean_circ: 0.933557
Ran for 63550 frames Cell Events: 2290 mean_circ: 0.933587
Ran for 64050 frames Cell Events: 2304 mean_circ: 0.933666
Ran for 64550 frames Cell Events: 2322 mean_circ: 0.933549
Ran for 65050 frames Cell Events: 2345 mean_circ: 0.93349
Ran for 65550 frames Cell Events: 2366 mean_circ: 0.933552
Ran for 66050 frames Cell Events: 2383 mean_circ: 0.933566
Ran for 66550 frames Cell Events: 2402 mean_circ: 0.933669
Ran for 67050 frames Cell Events: 2424 mean_circ: 0.933615
Ran for 67550 frames Cell Events: 2450 mean_circ: 0.933665
Ran for 68550 frames Cell Events: 2477 mean_circ: 0.933791
Ran for 69050 frames Cell Events: 2491 mean_circ: 0.933687
Ran for 69550 frames Cell Events: 2507 mean_circ: 0.933603
Ran for 71550 frames Cell Events: 2567 mean_circ: 0.933423
Ran for 72050 frames Cell Events: 2589 mean_circ: 0.93324
Ran for 72550 frames Cell Events: 2606 mean_circ: 0.933373
Ran for 75050 frames Cell Events: 2721 mean_circ: 0.933416
Ran for 75550 frames Cell Events: 2731 mean_circ: 0.933377
Ran for 76550 frames Cell Events: 2761 mean_circ: 0.933384
Ran for 77050 frames Cell Events: 2781 mean_circ: 0.933267
Ran for 77550 frames Cell Events: 2806 mean_circ: 0.933242
Ran for 78550 frames Cell Events: 2847 mean_circ: 0.933307
Ran for 81550 frames Cell Events: 2959 mean_circ: 0.933524
Ran for 82050 frames Cell Events: 2973 mean_circ: 0.933485
Ran for 83050 frames Cell Events: 3003 mean_circ: 0.93359
Ran for 83550 frames Cell Events: 3029 mean_circ: 0.933477
Ran for 84050 frames Cell Events: 3040 mean_circ: 0.933395
Ran for 85050 frames Cell Events: 3079 mean_circ: 0.93344
Ran for 86050 frames Cell Events: 3101 mean_circ: 0.933459
Ran for 86550 frames Cell Events: 3109 mean_circ: 0.933531
Ran for 87050 frames Cell Events: 3119 mean_circ: 0.933553
Ran for 87550 frames Cell Events: 3133 mean_circ: 0.933555
Ran for 88050 frames Cell Events: 3147 mean_circ: 0.933552
Ran for 88550 frames Cell Events: 3166 mean_circ: 0.933668
Ran for 89550 frames Cell Events: 3212 mean_circ: 0.933714
Ran for 90050 frames Cell Events: 3229 mean_circ: 0.933666
Ran for 90550 frames Cell Events: 3243 mean_circ: 0.933668
Ran for 91050 frames Cell Events: 3265 mean_circ: 0.933743
Ran for 92050 frames Cell Events: 3292 mean_circ: 0.933804
Ran for 92550 frames Cell Events: 3315 mean_circ: 0.933822
Ran for 93050 frames Cell Events: 3335 mean_circ: 0.933845
Ran for 94050 frames Cell Events: 3373 mean_circ: 0.933714
Ran for 94550 frames Cell Events: 3386 mean_circ: 0.933738
Ran for 95050 frames Cell Events: 3400 mean_circ: 0.933745
Ran for 96050 frames Cell Events: 3435 mean_circ: 0.933612
Ran for 96550 frames Cell Events: 3454 mean_circ: 0.9336
Ran for 97550 frames Cell Events: 3493 mean_circ: 0.933559
Ran for 98050 frames Cell Events: 3517 mean_circ: 0.933523
Ran for 99050 frames Cell Events: 3551 mean_circ: 0.933593
Ran for 99550 frames Cell Events: 3574 mean_circ: 0.933635
Ran for 101050 frames Cell Events: 3617 mean_circ: 0.933644
Ran for 102050 frames Cell Events: 3657 mean_circ: 0.933706
Ran for 103050 frames Cell Events: 3693 mean_circ: 0.933557
Ran for 103550 frames Cell Events: 3707 mean_circ: 0.933502
Ran for 104050 frames Cell Events: 3715 mean_circ: 0.933507
Ran for 104550 frames Cell Events: 3731 mean_circ: 0.933563
Ran for 105050 frames Cell Events: 3751 mean_circ: 0.933498
Ran for 105550 frames Cell Events: 3776 mean_circ: 0.933561
Ran for 106550 frames Cell Events: 3819 mean_circ: 0.933675
Ran for 107050 frames Cell Events: 3832 mean_circ: 0.93361
Ran for 107550 frames Cell Events: 3851 mean_circ: 0.933526
Ran for 108050 frames Cell Events: 3877 mean_circ: 0.933575
Ran for 108550 frames Cell Events: 3894 mean_circ: 0.933574
Ran for 109050 frames Cell Events: 3924 mean_circ: 0.933618
Ran for 109550 frames Cell Events: 3944 mean_circ: 0.93351
Ran for 110050 frames Cell Events: 3964 mean_circ: 0.933317
Ran for 110550 frames Cell Events: 3990 mean_circ: 0.933364
Ran for 111550 frames Cell Events: 4028 mean_circ: 0.933447
Ran for 112550 frames Cell Events: 4066 mean_circ: 0.933388
Ran for 113050 frames Cell Events: 4084 mean_circ: 0.93338
Ran for 114550 frames Cell Events: 4137 mean_circ: 0.933346
Ran for 115050 frames Cell Events: 4147 mean_circ: 0.933309
Ran for 116050 frames Cell Events: 4187 mean_circ: 0.933323
Ran for 117550 frames Cell Events: 4251 mean_circ: 0.933274
Ran for 118050 frames Cell Events: 4262 mean_circ: 0.933266
Ran for 118550 frames Cell Events: 4274 mean_circ: 0.933215
Ran for 119550 frames Cell Events: 4304 mean_circ: 0.933141
Ran for 120050 frames Cell Events: 4322 mean_circ: 0.933201
Ran for 121050 frames Cell Events: 4348 mean_circ: 0.933178
Ran for 121550 frames Cell Events: 4370 mean_circ: 0.933204
Ran for 122050 frames Cell Events: 4388 mean_circ: 0.933138
Ran for 122550 frames Cell Events: 4410 mean_circ: 0.933132
Ran for 123050 frames Cell Events: 4429 mean_circ: 0.933132
Ran for 125050 frames Cell Events: 4523 mean_circ: 0.933217
Ran for 125550 frames Cell Events: 4539 mean_circ: 0.933306
Ran for 126050 frames Cell Events: 4554 mean_circ: 0.933353
Ran for 127050 frames Cell Events: 4594 mean_circ: 0.933488
Ran for 127550 frames Cell Events: 4619 mean_circ: 0.933429
Ran for 128550 frames Cell Events: 4671 mean_circ: 0.933423
Ran for 129050 frames Cell Events: 4689 mean_circ: 0.933404
Ran for 129550 frames Cell Events: 4708 mean_circ: 0.933415
Ran for 130050 frames Cell Events: 4727 mean_circ: 0.933431
Ran for 131550 frames Cell Events: 4786 mean_circ: 0.933406
Ran for 132550 frames Cell Events: 4828 mean_circ: 0.933365
Ran for 133050 frames Cell Events: 4853 mean_circ: 0.933333
Ran for 134050 frames Cell Events: 4880 mean_circ: 0.933368
Ran for 135050 frames Cell Events: 4929 mean_circ: 0.93339
Ran for 136050 frames Cell Events: 4962 mean_circ: 0.933444
Ran for 136550 frames Cell Events: 4981 mean_circ: 0.933412
Ran for 137050 frames Cell Events: 5001 mean_circ: 0.933396
Ran for 137550 frames Cell Events: 5013 mean_circ: 0.933417
Ran for 138550 frames Cell Events: 5058 mean_circ: 0.933422
Ran for 139050 frames Cell Events: 5076 mean_circ: 0.93344
Ran for 139550 frames Cell Events: 5098 mean_circ: 0.933464
Ran for 140050 frames Cell Events: 5123 mean_circ: 0.933455
Ran for 140550 frames Cell Events: 5155 mean_circ: 0.933439
Ran for 141050 frames Cell Events: 5175 mean_circ: 0.933442
Ran for 141550 frames Cell Events: 5190 mean_circ: 0.933453
Ran for 142050 frames Cell Events: 5206 mean_circ: 0.933429
Ran for 142550 frames Cell Events: 5227 mean_circ: 0.933357
Ran for 143050 frames Cell Events: 5250 mean_circ: 0.933394
Ran for 143550 frames Cell Events: 5276 mean_circ: 0.933387
Ran for 145050 frames Cell Events: 5337 mean_circ: 0.933286
Ran for 146050 frames Cell Events: 5367 mean_circ: 0.933338
Ran for 146550 frames Cell Events: 5391 mean_circ: 0.933311
Ran for 147050 frames Cell Events: 5415 mean_circ: 0.933353
Ran for 147550 frames Cell Events: 5442 mean_circ: 0.933342
Ran for 148550 frames Cell Events: 5488 mean_circ: 0.933335
Ran for 149050 frames Cell Events: 5507 mean_circ: 0.933364
Ran for 149550 frames Cell Events: 5518 mean_circ: 0.933363
Ran for 150050 frames Cell Events: 5538 mean_circ: 0.93334
Ran for 150550 frames Cell Events: 5554 mean_circ: 0.933331
Ran for 151050 frames Cell Events: 5577 mean_circ: 0.933334
Ran for 151550 frames Cell Events: 5601 mean_circ: 0.93335
Ran for 152050 frames Cell Events: 5632 mean_circ: 0.933342
Ran for 153050 frames Cell Events: 5674 mean_circ: 0.933334
Ran for 153550 frames Cell Events: 5681 mean_circ: 0.93333
Ran for 154050 frames Cell Events: 5698 mean_circ: 0.933349
Ran for 154550 frames Cell Events: 5714 mean_circ: 0.933346
Ran for 157050 frames Cell Events: 5811 mean_circ: 0.93329
Ran for 157550 frames Cell Events: 5832 mean_circ: 0.933322
Ran for 158050 frames Cell Events: 5840 mean_circ: 0.933298
Ran for 159050 frames Cell Events: 5884 mean_circ: 0.933231
Ran for 160050 frames Cell Events: 5927 mean_circ: 0.93326
Ran for 160550 frames Cell Events: 5941 mean_circ: 0.933213
Ran for 161550 frames Cell Events: 5983 mean_circ: 0.933215
Ran for 162550 frames Cell Events: 6011 mean_circ: 0.933166
Ran for 163050 frames Cell Events: 6028 mean_circ: 0.933165
Ran for 163550 frames Cell Events: 6044 mean_circ: 0.933085
Ran for 164050 frames Cell Events: 6065 mean_circ: 0.933132
Ran for 165050 frames Cell Events: 6098 mean_circ: 0.933111
Ran for 166050 frames Cell Events: 6132 mean_circ: 0.933069
Ran for 167050 frames Cell Events: 6174 mean_circ: 0.933091
Ran for 168050 frames Cell Events: 6225 mean_circ: 0.933114
Ran for 168550 frames Cell Events: 6244 mean_circ: 0.933132
Ran for 169050 frames Cell Events: 6275 mean_circ: 0.93304
Ran for 169550 frames Cell Events: 6302 mean_circ: 0.932998
Ran for 171050 frames Cell Events: 6384 mean_circ: 0.933096
Ran for 171550 frames Cell Events: 6409 mean_circ: 0.933074
Ran for 172050 frames Cell Events: 6428 mean_circ: 0.933029
Ran for 172550 frames Cell Events: 6447 mean_circ: 0.933073
Ran for 174050 frames Cell Events: 6549 mean_circ: 0.93289
Ran for 174550 frames Cell Events: 6572 mean_circ: 0.932947
Ran for 175050 frames Cell Events: 6589 mean_circ: 0.932952
Ran for 175550 frames Cell Events: 6598 mean_circ: 0.932932
Ran for 176050 frames Cell Events: 6614 mean_circ: 0.932942
Ran for 176550 frames Cell Events: 6634 mean_circ: 0.932956
Ran for 177050 frames Cell Events: 6657 mean_circ: 0.932997
Ran for 177550 frames Cell Events: 6676 mean_circ: 0.93299
Ran for 178050 frames Cell Events: 6698 mean_circ: 0.93303
Ran for 178550 frames Cell Events: 6725 mean_circ: 0.933012
Ran for 180050 frames Cell Events: 6781 mean_circ: 0.933003
Ran for 180550 frames Cell Events: 6805 mean_circ: 0.933021
Ran for 181050 frames Cell Events: 6821 mean_circ: 0.933061
Ran for 181550 frames Cell Events: 6839 mean_circ: 0.933038
Ran for 182050 frames Cell Events: 6859 mean_circ: 0.933067
Ran for 183050 frames Cell Events: 6892 mean_circ: 0.933074
Ran for 184050 frames Cell Events: 6931 mean_circ: 0.933101
Ran for 184550 frames Cell Events: 6942 mean_circ: 0.933081
Ran for 185050 frames Cell Events: 6963 mean_circ: 0.933101
Ran for 185550 frames Cell Events: 6986 mean_circ: 0.933113
Ran for 186050 frames Cell Events: 6999 mean_circ: 0.933116
Ran for 186550 frames Cell Events: 7020 mean_circ: 0.93311
Ran for 187550 frames Cell Events: 7049 mean_circ: 0.933076
Ran for 188550 frames Cell Events: 7091 mean_circ: 0.933135
Ran for 189050 frames Cell Events: 7111 mean_circ: 0.933161
Ran for 190550 frames Cell Events: 7160 mean_circ: 0.933162
Ran for 193050 frames Cell Events: 7260 mean_circ: 0.93323
Ran for 193550 frames Cell Events: 7281 mean_circ: 0.933226
Ran for 194050 frames Cell Events: 7304 mean_circ: 0.933263
Ran for 194550 frames Cell Events: 7321 mean_circ: 0.93328
Ran for 195550 frames Cell Events: 7358 mean_circ: 0.933277
Ran for 196550 frames Cell Events: 7402 mean_circ: 0.933252
Ran for 197050 frames Cell Events: 7417 mean_circ: 0.93325
Ran for 199050 frames Cell Events: 7495 mean_circ: 0.933289
Ran for 199550 frames Cell Events: 7513 mean_circ: 0.933256
Ran for 200050 frames Cell Events: 7535 mean_circ: 0.933243
Ran for 200550 frames Cell Events: 7555 mean_circ: 0.933268
Ran for 201050 frames Cell Events: 7582 mean_circ: 0.933175
Ran for 202050 frames Cell Events: 7627 mean_circ: 0.933129
Ran for 202550 frames Cell Events: 7648 mean_circ: 0.933129
Ran for 203050 frames Cell Events: 7664 mean_circ: 0.933181
Ran for 204550 frames Cell Events: 7708 mean_circ: 0.933198
Ran for 205050 frames Cell Events: 7734 mean_circ: 0.933198
Ran for 205550 frames Cell Events: 7750 mean_circ: 0.933221
Ran for 206050 frames Cell Events: 7774 mean_circ: 0.933244
Ran for 206550 frames Cell Events: 7791 mean_circ: 0.933259
Ran for 207050 frames Cell Events: 7807 mean_circ: 0.933251
Ran for 207550 frames Cell Events: 7823 mean_circ: 0.933256
Ran for 208550 frames Cell Events: 7853 mean_circ: 0.933233
Ran for 209550 frames Cell Events: 7896 mean_circ: 0.933242
Ran for 210550 frames Cell Events: 7932 mean_circ: 0.933212
Ran for 211550 frames Cell Events: 7970 mean_circ: 0.933177
Ran for 212050 frames Cell Events: 7981 mean_circ: 0.93318
Ran for 212550 frames Cell Events: 8001 mean_circ: 0.9332
Ran for 213550 frames Cell Events: 8051 mean_circ: 0.933105
Ran for 214050 frames Cell Events: 8073 mean_circ: 0.933062
Ran for 214550 frames Cell Events: 8094 mean_circ: 0.933045
Ran for 215050 frames Cell Events: 8126 mean_circ: 0.933007
Ran for 215550 frames Cell Events: 8168 mean_circ: 0.933007
Ran for 216050 frames Cell Events: 8186 mean_circ: 0.933004
Ran for 216550 frames Cell Events: 8206 mean_circ: 0.932981
Ran for 218050 frames Cell Events: 8263 mean_circ: 0.932955
Ran for 218550 frames Cell Events: 8277 mean_circ: 0.932964
Ran for 219050 frames Cell Events: 8297 mean_circ: 0.932943
Ran for 219550 frames Cell Events: 8311 mean_circ: 0.932944
Ran for 220550 frames Cell Events: 8365 mean_circ: 0.932863
Ran for 221050 frames Cell Events: 8388 mean_circ: 0.932849
Ran for 221550 frames Cell Events: 8398 mean_circ: 0.932847
Ran for 222050 frames Cell Events: 8419 mean_circ: 0.932764
Ran for 222550 frames Cell Events: 8444 mean_circ: 0.932732
Ran for 223050 frames Cell Events: 8467 mean_circ: 0.932703
Ran for 224550 frames Cell Events: 8536 mean_circ: 0.932668
Ran for 225550 frames Cell Events: 8586 mean_circ: 0.932653
Ran for 226050 frames Cell Events: 8600 mean_circ: 0.932629
Ran for 226550 frames Cell Events: 8618 mean_circ: 0.932642
Ran for 227550 frames Cell Events: 8655 mean_circ: 0.93262
Ran for 228050 frames Cell Events: 8676 mean_circ: 0.932664
Ran for 228550 frames Cell Events: 8689 mean_circ: 0.93268
Ran for 229050 frames Cell Events: 8703 mean_circ: 0.932716
Ran for 229550 frames Cell Events: 8716 mean_circ: 0.932724
Ran for 231550 frames Cell Events: 8786 mean_circ: 0.932726
Ran for 232050 frames Cell Events: 8813 mean_circ: 0.932736
Ran for 232550 frames Cell Events: 8838 mean_circ: 0.932719
Ran for 233050 frames Cell Events: 8852 mean_circ: 0.932714
Ran for 234050 frames Cell Events: 8898 mean_circ: 0.932734
Ran for 235050 frames Cell Events: 8942 mean_circ: 0.932724
Ran for 235550 frames Cell Events: 8965 mean_circ: 0.932713
Ran for 236550 frames Cell Events: 9012 mean_circ: 0.932683
Ran for 237550 frames Cell Events: 9047 mean_circ: 0.932713
Ran for 238050 frames Cell Events: 9071 mean_circ: 0.932729
Ran for 239050 frames Cell Events: 9102 mean_circ: 0.932758
Ran for 240050 frames Cell Events: 9138 mean_circ: 0.932734
Ran for 240550 frames Cell Events: 9160 mean_circ: 0.932775
Ran for 241050 frames Cell Events: 9188 mean_circ: 0.932794
Ran for 241550 frames Cell Events: 9213 mean_circ: 0.932775
Ran for 242050 frames Cell Events: 9245 mean_circ: 0.932763
Ran for 242550 frames Cell Events: 9258 mean_circ: 0.93278
Ran for 243050 frames Cell Events: 9270 mean_circ: 0.932789
Ran for 243550 frames Cell Events: 9289 mean_circ: 0.932789
Ran for 244550 frames Cell Events: 9340 mean_circ: 0.932821
Ran for 245050 frames Cell Events: 9361 mean_circ: 0.932837
Ran for 245550 frames Cell Events: 9387 mean_circ: 0.932816
Ran for 248550 frames Cell Events: 9531 mean_circ: 0.932895
Ran for 249050 frames Cell Events: 9559 mean_circ: 0.932918
Ran for 249550 frames Cell Events: 9582 mean_circ: 0.932922
Ran for 250050 frames Cell Events: 9620 mean_circ: 0.932825
Ran for 250550 frames Cell Events: 9640 mean_circ: 0.932794
Ran for 251550 frames Cell Events: 9695 mean_circ: 0.932773
Ran for 252550 frames Cell Events: 9745 mean_circ: 0.932722
Ran for 253550 frames Cell Events: 9785 mean_circ: 0.932752
Ran for 254050 frames Cell Events: 9811 mean_circ: 0.932763
Ran for 255550 frames Cell Events: 9914 mean_circ: 0.932702
Ran for 257050 frames Cell Events: 9994 mean_circ: 0.932646



End this measurment.
because stop condition (time/nr of cells) was met

Stopping time: 6.3231e+008
****************************************
Measurement finished

Mean Circularitiy: 0.932637
Mean Area: 632.309
Mean FL-1 intensity: 3193.42
Mean FL-2 intensity: 4709.57
Mean FL-3 intensity: 0

frames processed: 254939
Total Time: 128742ms
Number of Runs (new bg img) 0
Frames collected: 257330
Skipped frames: 51645
Rescued Frames: 2585226
Samples DAQ: 64333726
Samples written: 128664798
Samples per Channel: 64332399
FPS: 1998.8

Samples per second: 499699
Expected samples/s: 500000

Events: 10001
Events per second: 77.6823
jumped back (PMT): 9
#Frames read, frequency
# 0 frames :350744
# 1 frames :144976
# 2 frames :5879
# 3 frames :1266
# 4 frames :712
# 5 frames :319
# 6 frames :3745
# 7 frames :2440
# 8 frames :1532
# 9 frames :662
# 10 frames :531
# 11 frames :329
# 12 frames :317
# 13 frames :168
# 14 frames :256
# 15 frames :183
# 16 frames :126
# 17 frames :75
# 18 frames :57
# 19 frames :37
# 20 frames :47
# 21 frames :41
# 22 frames :30
# 23 frames :23
# 24 frames :13
# 25 frames :15
# 26 frames :12
# 27 frames :8
# 28 frames :4
# 29 frames :11
# 30 frames :5
# 31 frames :9
# 32 frames :6
# 33 frames :3
# 34 frames :3
# 35 frames :1
# 36 frames :2
# 37 frames :2
# 38 frames :1
# 39 frames :1
# 40 frames :1
# 41 frames :1
# 45 frames :1
# 46 frames :2
# 55 frames :1
# 57 frames :1
# 72 frames :1
# 90 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.8134
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0