Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-09_19.41.01 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "655d8f9a8985064636143f566ceabad2",
"name": "M1_20170522_1749_dsRNA_M4_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "17:41:22"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8033 (max 8034) in '8033'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.423
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 6.38793e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 14 mean_circ: 0.923886
Ran for 1050 frames Cell Events: 25 mean_circ: 0.941333
Ran for 1550 frames Cell Events: 36 mean_circ: 0.945981
Ran for 2550 frames Cell Events: 65 mean_circ: 0.944588
Ran for 3550 frames Cell Events: 105 mean_circ: 0.943002
Ran for 4050 frames Cell Events: 121 mean_circ: 0.943985
Ran for 4550 frames Cell Events: 138 mean_circ: 0.946467
Ran for 5050 frames Cell Events: 152 mean_circ: 0.945772
Ran for 6050 frames Cell Events: 183 mean_circ: 0.944094
Ran for 6550 frames Cell Events: 199 mean_circ: 0.944603
Ran for 7050 frames Cell Events: 209 mean_circ: 0.944831
Ran for 7550 frames Cell Events: 215 mean_circ: 0.945394
Ran for 8050 frames Cell Events: 221 mean_circ: 0.945839
Ran for 8550 frames Cell Events: 234 mean_circ: 0.946145
Ran for 9550 frames Cell Events: 265 mean_circ: 0.946204
Ran for 10050 frames Cell Events: 271 mean_circ: 0.946297
Ran for 10550 frames Cell Events: 278 mean_circ: 0.946415
Ran for 11550 frames Cell Events: 290 mean_circ: 0.94652
Ran for 12550 frames Cell Events: 325 mean_circ: 0.946938
Ran for 14050 frames Cell Events: 366 mean_circ: 0.945331
Ran for 15050 frames Cell Events: 401 mean_circ: 0.945877
Ran for 15550 frames Cell Events: 409 mean_circ: 0.945404
Ran for 16050 frames Cell Events: 425 mean_circ: 0.945372
Ran for 17050 frames Cell Events: 479 mean_circ: 0.94449
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Ran for 18550 frames Cell Events: 539 mean_circ: 0.943903
Ran for 19050 frames Cell Events: 552 mean_circ: 0.943992
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Ran for 20050 frames Cell Events: 576 mean_circ: 0.943969
Ran for 20550 frames Cell Events: 591 mean_circ: 0.943281
Ran for 21050 frames Cell Events: 598 mean_circ: 0.943134
Ran for 21550 frames Cell Events: 614 mean_circ: 0.94287
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Ran for 22550 frames Cell Events: 643 mean_circ: 0.942684
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Ran for 23550 frames Cell Events: 659 mean_circ: 0.942609
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Ran for 28050 frames Cell Events: 779 mean_circ: 0.942452
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Ran for 30050 frames Cell Events: 823 mean_circ: 0.942434
Ran for 30550 frames Cell Events: 838 mean_circ: 0.942264
Ran for 32050 frames Cell Events: 899 mean_circ: 0.942702
Ran for 32550 frames Cell Events: 912 mean_circ: 0.942782
Ran for 33050 frames Cell Events: 926 mean_circ: 0.942982
Ran for 34050 frames Cell Events: 951 mean_circ: 0.943214
Ran for 34550 frames Cell Events: 963 mean_circ: 0.943368
Ran for 35050 frames Cell Events: 986 mean_circ: 0.943293
Ran for 35550 frames Cell Events: 1004 mean_circ: 0.943067
Ran for 37050 frames Cell Events: 1047 mean_circ: 0.942974
Ran for 38050 frames Cell Events: 1077 mean_circ: 0.943233
Ran for 38550 frames Cell Events: 1092 mean_circ: 0.94302
Ran for 39050 frames Cell Events: 1106 mean_circ: 0.943189
Ran for 39550 frames Cell Events: 1117 mean_circ: 0.943092
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Ran for 40550 frames Cell Events: 1162 mean_circ: 0.942745
Ran for 41050 frames Cell Events: 1176 mean_circ: 0.942516
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Ran for 42050 frames Cell Events: 1216 mean_circ: 0.942202
Ran for 42550 frames Cell Events: 1228 mean_circ: 0.942482
Ran for 43050 frames Cell Events: 1235 mean_circ: 0.942466
Ran for 44550 frames Cell Events: 1277 mean_circ: 0.942557
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Ran for 60050 frames Cell Events: 1790 mean_circ: 0.943828
Ran for 60550 frames Cell Events: 1801 mean_circ: 0.943877
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Ran for 62050 frames Cell Events: 1873 mean_circ: 0.944115
Ran for 63050 frames Cell Events: 1914 mean_circ: 0.944305
Ran for 63550 frames Cell Events: 1926 mean_circ: 0.94437
Ran for 64550 frames Cell Events: 1967 mean_circ: 0.944464
Ran for 65050 frames Cell Events: 1986 mean_circ: 0.944415
Ran for 65550 frames Cell Events: 2001 mean_circ: 0.94442
Ran for 66050 frames Cell Events: 2010 mean_circ: 0.944459
Ran for 66550 frames Cell Events: 2034 mean_circ: 0.944518
Ran for 67050 frames Cell Events: 2050 mean_circ: 0.944562
Ran for 67550 frames Cell Events: 2079 mean_circ: 0.944487
Ran for 68050 frames Cell Events: 2097 mean_circ: 0.944407
Ran for 68550 frames Cell Events: 2114 mean_circ: 0.944575
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Ran for 69550 frames Cell Events: 2150 mean_circ: 0.944521
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Ran for 71050 frames Cell Events: 2210 mean_circ: 0.94452
Ran for 71550 frames Cell Events: 2225 mean_circ: 0.944619
Ran for 72050 frames Cell Events: 2238 mean_circ: 0.944623
Ran for 72550 frames Cell Events: 2260 mean_circ: 0.944652
Ran for 73050 frames Cell Events: 2277 mean_circ: 0.944694
Ran for 73550 frames Cell Events: 2293 mean_circ: 0.944584
Ran for 74050 frames Cell Events: 2304 mean_circ: 0.944646
Ran for 74550 frames Cell Events: 2319 mean_circ: 0.944547
Ran for 75050 frames Cell Events: 2337 mean_circ: 0.944494
Ran for 75550 frames Cell Events: 2355 mean_circ: 0.944574
Ran for 76050 frames Cell Events: 2367 mean_circ: 0.944563
Ran for 76550 frames Cell Events: 2381 mean_circ: 0.944572
Ran for 77050 frames Cell Events: 2390 mean_circ: 0.944446
Ran for 77550 frames Cell Events: 2406 mean_circ: 0.944461
Ran for 78550 frames Cell Events: 2427 mean_circ: 0.944431
Ran for 80050 frames Cell Events: 2471 mean_circ: 0.944355
Ran for 80550 frames Cell Events: 2492 mean_circ: 0.944333
Ran for 81050 frames Cell Events: 2503 mean_circ: 0.944306
Ran for 81550 frames Cell Events: 2517 mean_circ: 0.944322
Ran for 82050 frames Cell Events: 2535 mean_circ: 0.944336
Ran for 82550 frames Cell Events: 2548 mean_circ: 0.944332
Ran for 83050 frames Cell Events: 2563 mean_circ: 0.944382
Ran for 84550 frames Cell Events: 2619 mean_circ: 0.944479
Ran for 86550 frames Cell Events: 2693 mean_circ: 0.944757
Ran for 87550 frames Cell Events: 2733 mean_circ: 0.9447
Ran for 88050 frames Cell Events: 2748 mean_circ: 0.944719
Ran for 88550 frames Cell Events: 2767 mean_circ: 0.944782
Ran for 89550 frames Cell Events: 2791 mean_circ: 0.94478
Ran for 90050 frames Cell Events: 2808 mean_circ: 0.944714
Ran for 90550 frames Cell Events: 2825 mean_circ: 0.944633
Ran for 91050 frames Cell Events: 2831 mean_circ: 0.944508
Ran for 91550 frames Cell Events: 2841 mean_circ: 0.944569
Ran for 92050 frames Cell Events: 2869 mean_circ: 0.944544
Ran for 92550 frames Cell Events: 2886 mean_circ: 0.944485
Ran for 93050 frames Cell Events: 2906 mean_circ: 0.944418
Ran for 94050 frames Cell Events: 2942 mean_circ: 0.9444
Ran for 94550 frames Cell Events: 2960 mean_circ: 0.944516
Ran for 95050 frames Cell Events: 2969 mean_circ: 0.944497
Ran for 95550 frames Cell Events: 2982 mean_circ: 0.944374
Ran for 96050 frames Cell Events: 3007 mean_circ: 0.944398
Ran for 97050 frames Cell Events: 3039 mean_circ: 0.944411
Ran for 97550 frames Cell Events: 3058 mean_circ: 0.944475
Ran for 98050 frames Cell Events: 3073 mean_circ: 0.944481
Ran for 99050 frames Cell Events: 3120 mean_circ: 0.944527
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Ran for 100050 frames Cell Events: 3159 mean_circ: 0.944589
Ran for 100550 frames Cell Events: 3174 mean_circ: 0.944555
Ran for 101050 frames Cell Events: 3194 mean_circ: 0.944622
Ran for 101550 frames Cell Events: 3198 mean_circ: 0.944639
Ran for 102550 frames Cell Events: 3247 mean_circ: 0.944522
Ran for 103050 frames Cell Events: 3266 mean_circ: 0.94451
Ran for 105050 frames Cell Events: 3345 mean_circ: 0.944607
Ran for 105550 frames Cell Events: 3352 mean_circ: 0.944611
Ran for 106050 frames Cell Events: 3366 mean_circ: 0.944619
Ran for 107050 frames Cell Events: 3397 mean_circ: 0.94471
Ran for 107550 frames Cell Events: 3410 mean_circ: 0.944725
Ran for 108050 frames Cell Events: 3429 mean_circ: 0.944769
Ran for 109050 frames Cell Events: 3453 mean_circ: 0.944777
Ran for 109550 frames Cell Events: 3467 mean_circ: 0.944793
Ran for 110050 frames Cell Events: 3489 mean_circ: 0.944851
Ran for 110550 frames Cell Events: 3508 mean_circ: 0.944791
Ran for 111050 frames Cell Events: 3518 mean_circ: 0.944786
Ran for 111550 frames Cell Events: 3530 mean_circ: 0.94481
Ran for 112050 frames Cell Events: 3546 mean_circ: 0.944781
Ran for 112550 frames Cell Events: 3559 mean_circ: 0.944738
Ran for 113050 frames Cell Events: 3573 mean_circ: 0.944745
Ran for 113550 frames Cell Events: 3587 mean_circ: 0.944684
Ran for 114050 frames Cell Events: 3602 mean_circ: 0.944694
Ran for 114550 frames Cell Events: 3616 mean_circ: 0.944711
Ran for 115050 frames Cell Events: 3630 mean_circ: 0.944698
Ran for 115550 frames Cell Events: 3639 mean_circ: 0.944661
Ran for 116050 frames Cell Events: 3660 mean_circ: 0.944677
Ran for 117050 frames Cell Events: 3691 mean_circ: 0.94463
Ran for 117550 frames Cell Events: 3706 mean_circ: 0.944573
Ran for 118050 frames Cell Events: 3720 mean_circ: 0.944651
Ran for 119550 frames Cell Events: 3769 mean_circ: 0.94468
Ran for 121050 frames Cell Events: 3829 mean_circ: 0.944629
Ran for 121550 frames Cell Events: 3840 mean_circ: 0.944634
Ran for 122050 frames Cell Events: 3851 mean_circ: 0.944653
Ran for 122550 frames Cell Events: 3871 mean_circ: 0.944664
Ran for 123050 frames Cell Events: 3888 mean_circ: 0.94464
Ran for 123550 frames Cell Events: 3912 mean_circ: 0.94463
Ran for 124050 frames Cell Events: 3922 mean_circ: 0.944643
Ran for 124550 frames Cell Events: 3933 mean_circ: 0.94465
Ran for 125550 frames Cell Events: 3973 mean_circ: 0.944583
Ran for 127050 frames Cell Events: 4011 mean_circ: 0.944524
Ran for 127550 frames Cell Events: 4027 mean_circ: 0.944542
Ran for 128050 frames Cell Events: 4043 mean_circ: 0.944547
Ran for 128550 frames Cell Events: 4066 mean_circ: 0.944572
Ran for 129050 frames Cell Events: 4080 mean_circ: 0.944507
Ran for 129550 frames Cell Events: 4099 mean_circ: 0.944582
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Ran for 131050 frames Cell Events: 4162 mean_circ: 0.944576
Ran for 131550 frames Cell Events: 4184 mean_circ: 0.944552
Ran for 132050 frames Cell Events: 4212 mean_circ: 0.944578
Ran for 132550 frames Cell Events: 4233 mean_circ: 0.944532
Ran for 133050 frames Cell Events: 4251 mean_circ: 0.944512
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Ran for 142050 frames Cell Events: 4559 mean_circ: 0.944508
Ran for 142550 frames Cell Events: 4573 mean_circ: 0.94453
Ran for 143550 frames Cell Events: 4609 mean_circ: 0.944406
Ran for 144050 frames Cell Events: 4644 mean_circ: 0.944445
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Ran for 151550 frames Cell Events: 4972 mean_circ: 0.944437
Ran for 152050 frames Cell Events: 4990 mean_circ: 0.94446
Ran for 152550 frames Cell Events: 5002 mean_circ: 0.944502
Ran for 153050 frames Cell Events: 5020 mean_circ: 0.9445
Ran for 153550 frames Cell Events: 5031 mean_circ: 0.944512
Ran for 154050 frames Cell Events: 5045 mean_circ: 0.944489
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Ran for 156050 frames Cell Events: 5098 mean_circ: 0.944522
Ran for 158550 frames Cell Events: 5188 mean_circ: 0.944586
Ran for 159050 frames Cell Events: 5201 mean_circ: 0.944535
Ran for 159550 frames Cell Events: 5216 mean_circ: 0.944512
Ran for 160050 frames Cell Events: 5230 mean_circ: 0.944506
Ran for 161050 frames Cell Events: 5267 mean_circ: 0.94454
Ran for 161550 frames Cell Events: 5272 mean_circ: 0.944541
Ran for 162550 frames Cell Events: 5300 mean_circ: 0.94456
Ran for 163050 frames Cell Events: 5319 mean_circ: 0.944592
Ran for 163550 frames Cell Events: 5336 mean_circ: 0.944603
Ran for 165050 frames Cell Events: 5381 mean_circ: 0.944619
Ran for 165550 frames Cell Events: 5403 mean_circ: 0.944615
Ran for 166550 frames Cell Events: 5433 mean_circ: 0.944642
Ran for 167050 frames Cell Events: 5457 mean_circ: 0.944648
Ran for 168550 frames Cell Events: 5492 mean_circ: 0.944577
Ran for 169050 frames Cell Events: 5517 mean_circ: 0.944606
Ran for 169550 frames Cell Events: 5532 mean_circ: 0.944576
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Ran for 171050 frames Cell Events: 5583 mean_circ: 0.944688
Ran for 172050 frames Cell Events: 5608 mean_circ: 0.944704
Ran for 172550 frames Cell Events: 5626 mean_circ: 0.944732
Ran for 173550 frames Cell Events: 5652 mean_circ: 0.94478
Ran for 174050 frames Cell Events: 5668 mean_circ: 0.944777
Ran for 174550 frames Cell Events: 5683 mean_circ: 0.944776
Ran for 175550 frames Cell Events: 5714 mean_circ: 0.944764
Ran for 176050 frames Cell Events: 5731 mean_circ: 0.944802
Ran for 176550 frames Cell Events: 5742 mean_circ: 0.944781
Ran for 177050 frames Cell Events: 5756 mean_circ: 0.944777
Ran for 177550 frames Cell Events: 5768 mean_circ: 0.944733
Ran for 178050 frames Cell Events: 5782 mean_circ: 0.944747
Ran for 178550 frames Cell Events: 5804 mean_circ: 0.944707
Ran for 179050 frames Cell Events: 5817 mean_circ: 0.944747
Ran for 179550 frames Cell Events: 5832 mean_circ: 0.944783
Ran for 180050 frames Cell Events: 5855 mean_circ: 0.944809
Ran for 180550 frames Cell Events: 5873 mean_circ: 0.944819
Ran for 181050 frames Cell Events: 5893 mean_circ: 0.94485
Ran for 182050 frames Cell Events: 5919 mean_circ: 0.944901
Ran for 183050 frames Cell Events: 5934 mean_circ: 0.944923
Ran for 183550 frames Cell Events: 5951 mean_circ: 0.944925
Ran for 184550 frames Cell Events: 5980 mean_circ: 0.944988
Ran for 185050 frames Cell Events: 5999 mean_circ: 0.944991
Ran for 185550 frames Cell Events: 6014 mean_circ: 0.944981
Ran for 186050 frames Cell Events: 6027 mean_circ: 0.944989
Ran for 186550 frames Cell Events: 6050 mean_circ: 0.944949
Ran for 187050 frames Cell Events: 6070 mean_circ: 0.944976
Ran for 187550 frames Cell Events: 6089 mean_circ: 0.944965
Ran for 188050 frames Cell Events: 6104 mean_circ: 0.944937
Ran for 189050 frames Cell Events: 6143 mean_circ: 0.944926
Ran for 189550 frames Cell Events: 6159 mean_circ: 0.944944
Ran for 190050 frames Cell Events: 6189 mean_circ: 0.944966
Ran for 190550 frames Cell Events: 6207 mean_circ: 0.944953
Ran for 191050 frames Cell Events: 6232 mean_circ: 0.944963
Ran for 191550 frames Cell Events: 6259 mean_circ: 0.944885
Ran for 192050 frames Cell Events: 6274 mean_circ: 0.944834
Ran for 192550 frames Cell Events: 6290 mean_circ: 0.944822
Ran for 193050 frames Cell Events: 6303 mean_circ: 0.944772
Ran for 193550 frames Cell Events: 6314 mean_circ: 0.944794
Ran for 194050 frames Cell Events: 6326 mean_circ: 0.944835
Ran for 194550 frames Cell Events: 6339 mean_circ: 0.944816
Ran for 195050 frames Cell Events: 6351 mean_circ: 0.944835
Ran for 195550 frames Cell Events: 6375 mean_circ: 0.944846
Ran for 196550 frames Cell Events: 6408 mean_circ: 0.944861
Ran for 197550 frames Cell Events: 6450 mean_circ: 0.944881
Ran for 198050 frames Cell Events: 6471 mean_circ: 0.944887
Ran for 198550 frames Cell Events: 6488 mean_circ: 0.94488
Ran for 199550 frames Cell Events: 6532 mean_circ: 0.944892
Ran for 200050 frames Cell Events: 6553 mean_circ: 0.944896
Ran for 201550 frames Cell Events: 6614 mean_circ: 0.944902
Ran for 202050 frames Cell Events: 6631 mean_circ: 0.944875
Ran for 202550 frames Cell Events: 6655 mean_circ: 0.944879
Ran for 203050 frames Cell Events: 6662 mean_circ: 0.944878
Ran for 203550 frames Cell Events: 6681 mean_circ: 0.944909
Ran for 204050 frames Cell Events: 6698 mean_circ: 0.94489
Ran for 204550 frames Cell Events: 6718 mean_circ: 0.944873
Ran for 205550 frames Cell Events: 6751 mean_circ: 0.944878
Ran for 206050 frames Cell Events: 6768 mean_circ: 0.944929
Ran for 207050 frames Cell Events: 6797 mean_circ: 0.944937
Ran for 207550 frames Cell Events: 6813 mean_circ: 0.944951
Ran for 208050 frames Cell Events: 6823 mean_circ: 0.944964
Ran for 208550 frames Cell Events: 6841 mean_circ: 0.944999
Ran for 209050 frames Cell Events: 6866 mean_circ: 0.945011
Ran for 209550 frames Cell Events: 6884 mean_circ: 0.944996
Ran for 210050 frames Cell Events: 6900 mean_circ: 0.945012
Ran for 211550 frames Cell Events: 6943 mean_circ: 0.945009
Ran for 212050 frames Cell Events: 6959 mean_circ: 0.945002
Ran for 213050 frames Cell Events: 7005 mean_circ: 0.945045
Ran for 213550 frames Cell Events: 7022 mean_circ: 0.945077
Ran for 214050 frames Cell Events: 7032 mean_circ: 0.945096
Ran for 214550 frames Cell Events: 7037 mean_circ: 0.9451
Ran for 215050 frames Cell Events: 7058 mean_circ: 0.945111
Ran for 215550 frames Cell Events: 7086 mean_circ: 0.945126
Ran for 216550 frames Cell Events: 7129 mean_circ: 0.945092
Ran for 217050 frames Cell Events: 7149 mean_circ: 0.945092
Ran for 217550 frames Cell Events: 7160 mean_circ: 0.945088
Ran for 218550 frames Cell Events: 7186 mean_circ: 0.9451
Ran for 219050 frames Cell Events: 7200 mean_circ: 0.945147
Ran for 219550 frames Cell Events: 7214 mean_circ: 0.945078
Ran for 220050 frames Cell Events: 7232 mean_circ: 0.945097
Ran for 221050 frames Cell Events: 7268 mean_circ: 0.945069
Ran for 223050 frames Cell Events: 7349 mean_circ: 0.944982
Ran for 223550 frames Cell Events: 7359 mean_circ: 0.944975
Ran for 224050 frames Cell Events: 7386 mean_circ: 0.94497
Ran for 224550 frames Cell Events: 7402 mean_circ: 0.944945
Ran for 225050 frames Cell Events: 7418 mean_circ: 0.944966
Ran for 225550 frames Cell Events: 7427 mean_circ: 0.944976
Ran for 227050 frames Cell Events: 7474 mean_circ: 0.944945
Ran for 227550 frames Cell Events: 7482 mean_circ: 0.944951
Ran for 228050 frames Cell Events: 7489 mean_circ: 0.944939
Ran for 228550 frames Cell Events: 7501 mean_circ: 0.944954
Ran for 229050 frames Cell Events: 7511 mean_circ: 0.944951
Ran for 229550 frames Cell Events: 7528 mean_circ: 0.944962
Ran for 230550 frames Cell Events: 7563 mean_circ: 0.944972
Ran for 231050 frames Cell Events: 7583 mean_circ: 0.944985
Ran for 231550 frames Cell Events: 7601 mean_circ: 0.944911
Ran for 232050 frames Cell Events: 7621 mean_circ: 0.944919
Ran for 233550 frames Cell Events: 7650 mean_circ: 0.944917
Ran for 234050 frames Cell Events: 7664 mean_circ: 0.944939
Ran for 234550 frames Cell Events: 7677 mean_circ: 0.944923
Ran for 235050 frames Cell Events: 7689 mean_circ: 0.944936
Ran for 235550 frames Cell Events: 7696 mean_circ: 0.94493
Ran for 236050 frames Cell Events: 7720 mean_circ: 0.944947
Ran for 236550 frames Cell Events: 7741 mean_circ: 0.944935
Ran for 237050 frames Cell Events: 7767 mean_circ: 0.944855
Ran for 237550 frames Cell Events: 7780 mean_circ: 0.944846
Ran for 238050 frames Cell Events: 7803 mean_circ: 0.944802
Ran for 238550 frames Cell Events: 7818 mean_circ: 0.944813
Ran for 240550 frames Cell Events: 7900 mean_circ: 0.944836
Ran for 241050 frames Cell Events: 7921 mean_circ: 0.944836
Ran for 241550 frames Cell Events: 7933 mean_circ: 0.944812
Ran for 242050 frames Cell Events: 7947 mean_circ: 0.944833
Ran for 242550 frames Cell Events: 7959 mean_circ: 0.94484
Ran for 243050 frames Cell Events: 7976 mean_circ: 0.944835
Ran for 244050 frames Cell Events: 8013 mean_circ: 0.944854
Ran for 244550 frames Cell Events: 8025 mean_circ: 0.944888



End this measurment..



Stopping time: 6.38915e+008
****************************************
Measurement finished

Mean Circularitiy: 0.944915
Mean Area: 621.576
Mean FL-1 intensity: 3429.64
Mean FL-2 intensity: 4672.64
Mean FL-3 intensity: 0

frames processed: 242768
Total Time: 122537ms
Number of Runs (new bg img) 0
Frames collected: 244933
Skipped frames: 85327
Rescued Frames: 4139838
Samples DAQ: 61234676
Samples written: 122466322
Samples per Channel: 61233161
FPS: 1998.85

Samples per second: 499713
Expected samples/s: 500000

Events: 8034
Events per second: 65.564
jumped back (PMT): 5507
#Frames read, frequency
# 0 frames :323497
# 1 frames :150049
# 2 frames :5234
# 3 frames :1362
# 4 frames :502
# 5 frames :177
# 6 frames :3343
# 7 frames :1953
# 8 frames :1296
# 9 frames :409
# 10 frames :346
# 11 frames :297
# 12 frames :418
# 13 frames :166
# 14 frames :254
# 15 frames :141
# 16 frames :95
# 17 frames :71
# 18 frames :26
# 19 frames :19
# 20 frames :32
# 21 frames :34
# 22 frames :22
# 23 frames :16
# 24 frames :10
# 25 frames :13
# 26 frames :4
# 27 frames :9
# 28 frames :8
# 29 frames :3
# 30 frames :1
# 31 frames :8
# 32 frames :1
# 33 frames :4
# 34 frames :3
# 35 frames :2
# 36 frames :3
# 37 frames :1
# 38 frames :1
# 41 frames :1
# 49 frames :1
# 50 frames :1
# 51 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.423
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0