Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_11.31.55
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "c80a0698684e020d736ca4b5c439f770",
"name": "M1_20170530_1439_dsRNA_K1_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "09:32:16"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8055 (max 8056) in '8055'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.6562
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.31862e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 12 mean_circ: 0.94229
Ran for 1050 frames Cell Events: 20 mean_circ: 0.920908
Ran for 2050 frames Cell Events: 58 mean_circ: 0.922333
Ran for 3050 frames Cell Events: 96 mean_circ: 0.922402
Ran for 3550 frames Cell Events: 114 mean_circ: 0.924109
Ran for 4050 frames Cell Events: 123 mean_circ: 0.923156
Ran for 4550 frames Cell Events: 144 mean_circ: 0.922651
Ran for 5050 frames Cell Events: 165 mean_circ: 0.921647
Ran for 5550 frames Cell Events: 190 mean_circ: 0.921039
Ran for 6550 frames Cell Events: 237 mean_circ: 0.920861
Ran for 7550 frames Cell Events: 282 mean_circ: 0.919695
Ran for 9050 frames Cell Events: 346 mean_circ: 0.919841
Ran for 10050 frames Cell Events: 382 mean_circ: 0.919515
Ran for 11050 frames Cell Events: 434 mean_circ: 0.920441
Ran for 11550 frames Cell Events: 442 mean_circ: 0.920302
Ran for 12050 frames Cell Events: 462 mean_circ: 0.91936
Ran for 12550 frames Cell Events: 477 mean_circ: 0.91844
Ran for 13050 frames Cell Events: 502 mean_circ: 0.918474
Ran for 14050 frames Cell Events: 547 mean_circ: 0.916895
Ran for 14550 frames Cell Events: 567 mean_circ: 0.91622
Ran for 15050 frames Cell Events: 590 mean_circ: 0.916969
Ran for 15550 frames Cell Events: 610 mean_circ: 0.916694
Ran for 16550 frames Cell Events: 648 mean_circ: 0.917647
Ran for 17550 frames Cell Events: 689 mean_circ: 0.917729
Ran for 19050 frames Cell Events: 761 mean_circ: 0.918015
Ran for 20050 frames Cell Events: 803 mean_circ: 0.91828
Ran for 20550 frames Cell Events: 822 mean_circ: 0.917933
Ran for 21550 frames Cell Events: 858 mean_circ: 0.918453
Ran for 22050 frames Cell Events: 874 mean_circ: 0.918157
Ran for 22550 frames Cell Events: 895 mean_circ: 0.918561
Ran for 23050 frames Cell Events: 924 mean_circ: 0.9184
Ran for 24050 frames Cell Events: 963 mean_circ: 0.918317
Ran for 24550 frames Cell Events: 980 mean_circ: 0.918154
Ran for 25050 frames Cell Events: 993 mean_circ: 0.917053
Ran for 25550 frames Cell Events: 1005 mean_circ: 0.916769
Ran for 26050 frames Cell Events: 1026 mean_circ: 0.91674
Ran for 28550 frames Cell Events: 1128 mean_circ: 0.917244
Ran for 30050 frames Cell Events: 1213 mean_circ: 0.917629
Ran for 30550 frames Cell Events: 1233 mean_circ: 0.917847
Ran for 31050 frames Cell Events: 1251 mean_circ: 0.917688
Ran for 31550 frames Cell Events: 1263 mean_circ: 0.917916
Ran for 32050 frames Cell Events: 1288 mean_circ: 0.917856
Ran for 32550 frames Cell Events: 1299 mean_circ: 0.917986
Ran for 33550 frames Cell Events: 1339 mean_circ: 0.918091
Ran for 34550 frames Cell Events: 1379 mean_circ: 0.918252
Ran for 36050 frames Cell Events: 1450 mean_circ: 0.918425
Ran for 36550 frames Cell Events: 1467 mean_circ: 0.918555
Ran for 37050 frames Cell Events: 1475 mean_circ: 0.918707
Ran for 37550 frames Cell Events: 1486 mean_circ: 0.918722
Ran for 38050 frames Cell Events: 1514 mean_circ: 0.918673
Ran for 40050 frames Cell Events: 1577 mean_circ: 0.918625
Ran for 40550 frames Cell Events: 1607 mean_circ: 0.918731
Ran for 41550 frames Cell Events: 1652 mean_circ: 0.918941
Ran for 42050 frames Cell Events: 1672 mean_circ: 0.919005
Ran for 42550 frames Cell Events: 1696 mean_circ: 0.919167
Ran for 43050 frames Cell Events: 1719 mean_circ: 0.919008
Ran for 44550 frames Cell Events: 1779 mean_circ: 0.919217
Ran for 45050 frames Cell Events: 1803 mean_circ: 0.919446
Ran for 48050 frames Cell Events: 1931 mean_circ: 0.918807
Ran for 48550 frames Cell Events: 1942 mean_circ: 0.918799
Ran for 49050 frames Cell Events: 1968 mean_circ: 0.918843
Ran for 49550 frames Cell Events: 1993 mean_circ: 0.918608
Ran for 50050 frames Cell Events: 2026 mean_circ: 0.918535
Ran for 50550 frames Cell Events: 2043 mean_circ: 0.918484
Ran for 51050 frames Cell Events: 2060 mean_circ: 0.918509
Ran for 52050 frames Cell Events: 2106 mean_circ: 0.918557
Ran for 52550 frames Cell Events: 2118 mean_circ: 0.918461
Ran for 54050 frames Cell Events: 2166 mean_circ: 0.918399
Ran for 54550 frames Cell Events: 2182 mean_circ: 0.918516
Ran for 55050 frames Cell Events: 2199 mean_circ: 0.918473
Ran for 56550 frames Cell Events: 2257 mean_circ: 0.918505
Ran for 57550 frames Cell Events: 2297 mean_circ: 0.918711
Ran for 58550 frames Cell Events: 2342 mean_circ: 0.918866
Ran for 59050 frames Cell Events: 2354 mean_circ: 0.918802
Ran for 60550 frames Cell Events: 2412 mean_circ: 0.91862
Ran for 62050 frames Cell Events: 2472 mean_circ: 0.918779
Ran for 63050 frames Cell Events: 2502 mean_circ: 0.918673
Ran for 63550 frames Cell Events: 2517 mean_circ: 0.918707
Ran for 64050 frames Cell Events: 2523 mean_circ: 0.91868
Ran for 64550 frames Cell Events: 2538 mean_circ: 0.918728
Ran for 66050 frames Cell Events: 2590 mean_circ: 0.918935
Ran for 66550 frames Cell Events: 2608 mean_circ: 0.919042
Ran for 67550 frames Cell Events: 2657 mean_circ: 0.918912
Ran for 68050 frames Cell Events: 2669 mean_circ: 0.918928
Ran for 68550 frames Cell Events: 2694 mean_circ: 0.91891
Ran for 69550 frames Cell Events: 2731 mean_circ: 0.918784
Ran for 70050 frames Cell Events: 2749 mean_circ: 0.918698
Ran for 70550 frames Cell Events: 2772 mean_circ: 0.918825
Ran for 71050 frames Cell Events: 2801 mean_circ: 0.918773
Ran for 71550 frames Cell Events: 2814 mean_circ: 0.91886
Ran for 72550 frames Cell Events: 2852 mean_circ: 0.919013
Ran for 73050 frames Cell Events: 2868 mean_circ: 0.919091
Ran for 75050 frames Cell Events: 2946 mean_circ: 0.91915
Ran for 75550 frames Cell Events: 2959 mean_circ: 0.919182
Ran for 76050 frames Cell Events: 2977 mean_circ: 0.919135
Ran for 77050 frames Cell Events: 2997 mean_circ: 0.919133
Ran for 78550 frames Cell Events: 3046 mean_circ: 0.919249
Ran for 79050 frames Cell Events: 3066 mean_circ: 0.919308
Ran for 79550 frames Cell Events: 3105 mean_circ: 0.919392
Ran for 80550 frames Cell Events: 3147 mean_circ: 0.919406
Ran for 81050 frames Cell Events: 3161 mean_circ: 0.919436
Ran for 81550 frames Cell Events: 3205 mean_circ: 0.919476
Ran for 82550 frames Cell Events: 3264 mean_circ: 0.919474
Ran for 83050 frames Cell Events: 3288 mean_circ: 0.919371
Ran for 83550 frames Cell Events: 3314 mean_circ: 0.919426
Ran for 85050 frames Cell Events: 3376 mean_circ: 0.919367
Ran for 85550 frames Cell Events: 3395 mean_circ: 0.91936
Ran for 86550 frames Cell Events: 3446 mean_circ: 0.919179
Ran for 87050 frames Cell Events: 3468 mean_circ: 0.919162
Ran for 88050 frames Cell Events: 3488 mean_circ: 0.919178
Ran for 88550 frames Cell Events: 3501 mean_circ: 0.919207
Ran for 89550 frames Cell Events: 3529 mean_circ: 0.919087
Ran for 90050 frames Cell Events: 3542 mean_circ: 0.919159
Ran for 92050 frames Cell Events: 3636 mean_circ: 0.918952
Ran for 92550 frames Cell Events: 3650 mean_circ: 0.918844
Ran for 93050 frames Cell Events: 3671 mean_circ: 0.918822
Ran for 95050 frames Cell Events: 3723 mean_circ: 0.918755
Ran for 97050 frames Cell Events: 3798 mean_circ: 0.918704
Ran for 97550 frames Cell Events: 3830 mean_circ: 0.918638
Ran for 99050 frames Cell Events: 3872 mean_circ: 0.918614
Ran for 99550 frames Cell Events: 3883 mean_circ: 0.918625
Ran for 100050 frames Cell Events: 3902 mean_circ: 0.918678
Ran for 100550 frames Cell Events: 3917 mean_circ: 0.918704
Ran for 101550 frames Cell Events: 3964 mean_circ: 0.918656
Ran for 102050 frames Cell Events: 3984 mean_circ: 0.918503
Ran for 102550 frames Cell Events: 4001 mean_circ: 0.918476
Ran for 103550 frames Cell Events: 4040 mean_circ: 0.918432
Ran for 104050 frames Cell Events: 4049 mean_circ: 0.918448
Ran for 104550 frames Cell Events: 4066 mean_circ: 0.918512
Ran for 105550 frames Cell Events: 4109 mean_circ: 0.918585
Ran for 106550 frames Cell Events: 4143 mean_circ: 0.91857
Ran for 107050 frames Cell Events: 4162 mean_circ: 0.918591
Ran for 107550 frames Cell Events: 4175 mean_circ: 0.918616
Ran for 108050 frames Cell Events: 4199 mean_circ: 0.918659
Ran for 108550 frames Cell Events: 4212 mean_circ: 0.918682
Ran for 109050 frames Cell Events: 4228 mean_circ: 0.918688
Ran for 109550 frames Cell Events: 4247 mean_circ: 0.918793
Ran for 110050 frames Cell Events: 4272 mean_circ: 0.918779
Ran for 110550 frames Cell Events: 4284 mean_circ: 0.918729
Ran for 111050 frames Cell Events: 4310 mean_circ: 0.918805
Ran for 111550 frames Cell Events: 4318 mean_circ: 0.91876
Ran for 112050 frames Cell Events: 4344 mean_circ: 0.918739
Ran for 112550 frames Cell Events: 4352 mean_circ: 0.918771
Ran for 113050 frames Cell Events: 4375 mean_circ: 0.918842
Ran for 113550 frames Cell Events: 4391 mean_circ: 0.918852
Ran for 114050 frames Cell Events: 4413 mean_circ: 0.918912
Ran for 114550 frames Cell Events: 4435 mean_circ: 0.918947
Ran for 115050 frames Cell Events: 4458 mean_circ: 0.918939
Ran for 115550 frames Cell Events: 4470 mean_circ: 0.918975
Ran for 117050 frames Cell Events: 4521 mean_circ: 0.918967
Ran for 117550 frames Cell Events: 4539 mean_circ: 0.918956
Ran for 118050 frames Cell Events: 4545 mean_circ: 0.918824
Ran for 119550 frames Cell Events: 4604 mean_circ: 0.918936
Ran for 120050 frames Cell Events: 4619 mean_circ: 0.918963
Ran for 121050 frames Cell Events: 4645 mean_circ: 0.918976
Ran for 121550 frames Cell Events: 4669 mean_circ: 0.918984
Ran for 122050 frames Cell Events: 4683 mean_circ: 0.918992
Ran for 123050 frames Cell Events: 4714 mean_circ: 0.919016
Ran for 124050 frames Cell Events: 4756 mean_circ: 0.919073
Ran for 125050 frames Cell Events: 4785 mean_circ: 0.918961
Ran for 125550 frames Cell Events: 4804 mean_circ: 0.91901
Ran for 126550 frames Cell Events: 4845 mean_circ: 0.918995
Ran for 127050 frames Cell Events: 4872 mean_circ: 0.918999
Ran for 128050 frames Cell Events: 4922 mean_circ: 0.91912
Ran for 128550 frames Cell Events: 4955 mean_circ: 0.919125
Ran for 129050 frames Cell Events: 4976 mean_circ: 0.919116
Ran for 130550 frames Cell Events: 5043 mean_circ: 0.919178
Ran for 131550 frames Cell Events: 5088 mean_circ: 0.919089
Ran for 132050 frames Cell Events: 5118 mean_circ: 0.919157
Ran for 132550 frames Cell Events: 5138 mean_circ: 0.919158
Ran for 133050 frames Cell Events: 5156 mean_circ: 0.91902
Ran for 133550 frames Cell Events: 5171 mean_circ: 0.919086
Ran for 134050 frames Cell Events: 5191 mean_circ: 0.919017
Ran for 134550 frames Cell Events: 5211 mean_circ: 0.918967
Ran for 135050 frames Cell Events: 5228 mean_circ: 0.918965
Ran for 136050 frames Cell Events: 5274 mean_circ: 0.918906
Ran for 136550 frames Cell Events: 5304 mean_circ: 0.918956
Ran for 137050 frames Cell Events: 5325 mean_circ: 0.918994
Ran for 137550 frames Cell Events: 5346 mean_circ: 0.918995
Ran for 138550 frames Cell Events: 5388 mean_circ: 0.919044
Ran for 139050 frames Cell Events: 5399 mean_circ: 0.919044
Ran for 140050 frames Cell Events: 5435 mean_circ: 0.919061
Ran for 140550 frames Cell Events: 5449 mean_circ: 0.91904
Ran for 141050 frames Cell Events: 5464 mean_circ: 0.91906
Ran for 141550 frames Cell Events: 5475 mean_circ: 0.919079
Ran for 142050 frames Cell Events: 5488 mean_circ: 0.919127
Ran for 142550 frames Cell Events: 5504 mean_circ: 0.919182
Ran for 143550 frames Cell Events: 5547 mean_circ: 0.919095
Ran for 144050 frames Cell Events: 5565 mean_circ: 0.919114
Ran for 144550 frames Cell Events: 5580 mean_circ: 0.919111
Ran for 145050 frames Cell Events: 5598 mean_circ: 0.919118
Ran for 146550 frames Cell Events: 5668 mean_circ: 0.919021
Ran for 148050 frames Cell Events: 5715 mean_circ: 0.919093
Ran for 148550 frames Cell Events: 5729 mean_circ: 0.919141
Ran for 149050 frames Cell Events: 5744 mean_circ: 0.919163
Ran for 149550 frames Cell Events: 5757 mean_circ: 0.919233
Ran for 150050 frames Cell Events: 5778 mean_circ: 0.919241
Ran for 150550 frames Cell Events: 5794 mean_circ: 0.919199
Ran for 151050 frames Cell Events: 5809 mean_circ: 0.919204
Ran for 152050 frames Cell Events: 5847 mean_circ: 0.919252
Ran for 152550 frames Cell Events: 5858 mean_circ: 0.919261
Ran for 153050 frames Cell Events: 5875 mean_circ: 0.919222
Ran for 154050 frames Cell Events: 5912 mean_circ: 0.919243
Ran for 154550 frames Cell Events: 5937 mean_circ: 0.919209
Ran for 155050 frames Cell Events: 5953 mean_circ: 0.919174
Ran for 156050 frames Cell Events: 5996 mean_circ: 0.919187
Ran for 156550 frames Cell Events: 6017 mean_circ: 0.919204
Ran for 157550 frames Cell Events: 6058 mean_circ: 0.919153
Ran for 158050 frames Cell Events: 6076 mean_circ: 0.919109
Ran for 160550 frames Cell Events: 6179 mean_circ: 0.919059
Ran for 162050 frames Cell Events: 6257 mean_circ: 0.919109
Ran for 162550 frames Cell Events: 6279 mean_circ: 0.919045
Ran for 163050 frames Cell Events: 6295 mean_circ: 0.919014
Ran for 164550 frames Cell Events: 6313 mean_circ: 0.919047
Ran for 165050 frames Cell Events: 6324 mean_circ: 0.919015
Ran for 165550 frames Cell Events: 6345 mean_circ: 0.919029
Ran for 166550 frames Cell Events: 6379 mean_circ: 0.919033
Ran for 167550 frames Cell Events: 6404 mean_circ: 0.919009
Ran for 168050 frames Cell Events: 6423 mean_circ: 0.919042
Ran for 168550 frames Cell Events: 6446 mean_circ: 0.919009
Ran for 170550 frames Cell Events: 6548 mean_circ: 0.918951
Ran for 171050 frames Cell Events: 6563 mean_circ: 0.91894
Ran for 172050 frames Cell Events: 6603 mean_circ: 0.919009
Ran for 172550 frames Cell Events: 6621 mean_circ: 0.918991
Ran for 173050 frames Cell Events: 6638 mean_circ: 0.919065
Ran for 174050 frames Cell Events: 6672 mean_circ: 0.919082
Ran for 174550 frames Cell Events: 6690 mean_circ: 0.919113
Ran for 176050 frames Cell Events: 6778 mean_circ: 0.91916
Ran for 178050 frames Cell Events: 6854 mean_circ: 0.919068
Ran for 178550 frames Cell Events: 6872 mean_circ: 0.919068
Ran for 179050 frames Cell Events: 6899 mean_circ: 0.919018
Ran for 181550 frames Cell Events: 7029 mean_circ: 0.918939
Ran for 182050 frames Cell Events: 7044 mean_circ: 0.918911
Ran for 182550 frames Cell Events: 7066 mean_circ: 0.918959
Ran for 183550 frames Cell Events: 7105 mean_circ: 0.918875
Ran for 184050 frames Cell Events: 7118 mean_circ: 0.918876
Ran for 185050 frames Cell Events: 7169 mean_circ: 0.91891
Ran for 185550 frames Cell Events: 7199 mean_circ: 0.91894
Ran for 187050 frames Cell Events: 7260 mean_circ: 0.918765
Ran for 187550 frames Cell Events: 7289 mean_circ: 0.918752
Ran for 188550 frames Cell Events: 7318 mean_circ: 0.918782
Ran for 189050 frames Cell Events: 7333 mean_circ: 0.918778
Ran for 189550 frames Cell Events: 7354 mean_circ: 0.918795
Ran for 191550 frames Cell Events: 7450 mean_circ: 0.918692
Ran for 192550 frames Cell Events: 7507 mean_circ: 0.918659
Ran for 193050 frames Cell Events: 7527 mean_circ: 0.918675
Ran for 194550 frames Cell Events: 7572 mean_circ: 0.918658
Ran for 195050 frames Cell Events: 7588 mean_circ: 0.918646
Ran for 195550 frames Cell Events: 7599 mean_circ: 0.918639
Ran for 196550 frames Cell Events: 7649 mean_circ: 0.918644
Ran for 197050 frames Cell Events: 7672 mean_circ: 0.918607
Ran for 197550 frames Cell Events: 7693 mean_circ: 0.918602
Ran for 198050 frames Cell Events: 7701 mean_circ: 0.918598
Ran for 198550 frames Cell Events: 7712 mean_circ: 0.918562
Ran for 199050 frames Cell Events: 7732 mean_circ: 0.918602
Ran for 200550 frames Cell Events: 7794 mean_circ: 0.918568
Ran for 201050 frames Cell Events: 7821 mean_circ: 0.918588
Ran for 201550 frames Cell Events: 7836 mean_circ: 0.918591
Ran for 202050 frames Cell Events: 7856 mean_circ: 0.918559
Ran for 204050 frames Cell Events: 7916 mean_circ: 0.918578
Ran for 205050 frames Cell Events: 7955 mean_circ: 0.918587
Ran for 206050 frames Cell Events: 7990 mean_circ: 0.918555
Ran for 206550 frames Cell Events: 8010 mean_circ: 0.918517
Ran for 207050 frames Cell Events: 8029 mean_circ: 0.918498
Ran for 207550 frames Cell Events: 8045 mean_circ: 0.918541
End this measurment..
Stopping time: 1.31873e+009
****************************************
Measurement finished
Mean Circularitiy: 0.918546
Mean Area: 625.165
Mean FL-1 intensity: 2460.61
Mean FL-2 intensity: 3627.75
Mean FL-3 intensity: 0
frames processed: 205230
Total Time: 103973ms
Number of Runs (new bg img) 0
Frames collected: 207765
Skipped frames: 19172
Rescued Frames: 960017
Samples DAQ: 51941313
Samples written: 103882532
Samples per Channel: 51941266
FPS: 1998.26
Samples per second: 499566
Expected samples/s: 500000
Events: 8056
Events per second: 77.4818
jumped back (PMT): 20
#Frames read, frequency
# 0 frames :295301
# 1 frames :104229
# 2 frames :4524
# 3 frames :1530
# 4 frames :785
# 5 frames :332
# 6 frames :2470
# 7 frames :1548
# 8 frames :1287
# 9 frames :630
# 10 frames :611
# 11 frames :413
# 12 frames :350
# 13 frames :227
# 14 frames :261
# 15 frames :183
# 16 frames :151
# 17 frames :140
# 18 frames :99
# 19 frames :55
# 20 frames :71
# 21 frames :42
# 22 frames :40
# 23 frames :33
# 24 frames :33
# 25 frames :22
# 26 frames :18
# 27 frames :23
# 28 frames :10
# 29 frames :13
# 30 frames :5
# 31 frames :8
# 32 frames :10
# 33 frames :4
# 34 frames :3
# 35 frames :4
# 36 frames :4
# 37 frames :1
# 38 frames :3
# 39 frames :1
# 40 frames :1
# 41 frames :3
# 43 frames :3
# 44 frames :3
# 45 frames :2
# 46 frames :1
# 50 frames :2
# 51 frames :1
# 52 frames :1
# 59 frames :1
# 68 frames :1
# 70 frames :1
# 73 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.6562
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0