Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_11.43.19 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "e8afd51976549f4d52327b6896359cd9",
"name": "M1_20170530_1657_dsRNA_J4_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "09:43:41"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8312 (max 8313) in '8312'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.9835
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.32688e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 27 mean_circ: 0.931605
Ran for 1050 frames Cell Events: 50 mean_circ: 0.935737
Ran for 2050 frames Cell Events: 83 mean_circ: 0.934255
Ran for 2550 frames Cell Events: 101 mean_circ: 0.935544
Ran for 3050 frames Cell Events: 111 mean_circ: 0.936368
Ran for 3550 frames Cell Events: 137 mean_circ: 0.934975
Ran for 4550 frames Cell Events: 146 mean_circ: 0.934627
Ran for 5050 frames Cell Events: 157 mean_circ: 0.935029
Ran for 5550 frames Cell Events: 174 mean_circ: 0.934008
Ran for 6050 frames Cell Events: 191 mean_circ: 0.93417
Ran for 6550 frames Cell Events: 197 mean_circ: 0.9345
Ran for 7050 frames Cell Events: 204 mean_circ: 0.934775
Ran for 8050 frames Cell Events: 236 mean_circ: 0.932405
Ran for 8550 frames Cell Events: 257 mean_circ: 0.933135
Ran for 9550 frames Cell Events: 299 mean_circ: 0.932308
Ran for 10550 frames Cell Events: 333 mean_circ: 0.932368
Ran for 11050 frames Cell Events: 354 mean_circ: 0.932048
Ran for 12050 frames Cell Events: 387 mean_circ: 0.931686
Ran for 12550 frames Cell Events: 401 mean_circ: 0.931784
Ran for 13050 frames Cell Events: 412 mean_circ: 0.931216
Ran for 13550 frames Cell Events: 437 mean_circ: 0.930474
Ran for 14050 frames Cell Events: 464 mean_circ: 0.930545
Ran for 15550 frames Cell Events: 529 mean_circ: 0.930436
Ran for 16050 frames Cell Events: 546 mean_circ: 0.930539
Ran for 16550 frames Cell Events: 564 mean_circ: 0.93045
Ran for 17050 frames Cell Events: 586 mean_circ: 0.93025
Ran for 17550 frames Cell Events: 600 mean_circ: 0.930604
Ran for 18550 frames Cell Events: 632 mean_circ: 0.930783
Ran for 19550 frames Cell Events: 670 mean_circ: 0.930012
Ran for 20050 frames Cell Events: 688 mean_circ: 0.929935
Ran for 20550 frames Cell Events: 702 mean_circ: 0.929736
Ran for 21050 frames Cell Events: 721 mean_circ: 0.929836
Ran for 21550 frames Cell Events: 742 mean_circ: 0.928914
Ran for 22050 frames Cell Events: 756 mean_circ: 0.928854
Ran for 22550 frames Cell Events: 779 mean_circ: 0.928741
Ran for 23050 frames Cell Events: 805 mean_circ: 0.929123
Ran for 23550 frames Cell Events: 821 mean_circ: 0.929258
Ran for 24050 frames Cell Events: 836 mean_circ: 0.929205
Ran for 24550 frames Cell Events: 859 mean_circ: 0.928518
Ran for 25050 frames Cell Events: 866 mean_circ: 0.928026
Ran for 25550 frames Cell Events: 884 mean_circ: 0.927855
Ran for 26050 frames Cell Events: 900 mean_circ: 0.927722
Ran for 26550 frames Cell Events: 911 mean_circ: 0.927581
Ran for 27050 frames Cell Events: 933 mean_circ: 0.92757
Ran for 29050 frames Cell Events: 993 mean_circ: 0.927841
Ran for 29550 frames Cell Events: 1009 mean_circ: 0.927632
Ran for 30050 frames Cell Events: 1025 mean_circ: 0.927142
Ran for 30550 frames Cell Events: 1040 mean_circ: 0.926908
Ran for 31050 frames Cell Events: 1057 mean_circ: 0.92692
Ran for 31550 frames Cell Events: 1071 mean_circ: 0.926994
Ran for 32050 frames Cell Events: 1090 mean_circ: 0.926876
Ran for 32550 frames Cell Events: 1107 mean_circ: 0.926916
Ran for 33050 frames Cell Events: 1127 mean_circ: 0.926988
Ran for 34550 frames Cell Events: 1155 mean_circ: 0.927109
Ran for 35050 frames Cell Events: 1173 mean_circ: 0.927075
Ran for 35550 frames Cell Events: 1191 mean_circ: 0.927334
Ran for 36050 frames Cell Events: 1212 mean_circ: 0.927346
Ran for 36550 frames Cell Events: 1239 mean_circ: 0.927446
Ran for 37050 frames Cell Events: 1263 mean_circ: 0.9274
Ran for 37550 frames Cell Events: 1278 mean_circ: 0.927602
Ran for 38550 frames Cell Events: 1322 mean_circ: 0.92783
Ran for 40050 frames Cell Events: 1383 mean_circ: 0.927496
Ran for 40550 frames Cell Events: 1391 mean_circ: 0.927444
Ran for 41050 frames Cell Events: 1399 mean_circ: 0.927122
Ran for 41550 frames Cell Events: 1414 mean_circ: 0.927125
Ran for 42550 frames Cell Events: 1464 mean_circ: 0.926918
Ran for 43550 frames Cell Events: 1497 mean_circ: 0.926778
Ran for 44050 frames Cell Events: 1511 mean_circ: 0.926916
Ran for 45050 frames Cell Events: 1555 mean_circ: 0.926368
Ran for 45550 frames Cell Events: 1571 mean_circ: 0.926233
Ran for 46050 frames Cell Events: 1597 mean_circ: 0.926124
Ran for 46550 frames Cell Events: 1609 mean_circ: 0.926074
Ran for 47050 frames Cell Events: 1622 mean_circ: 0.926229
Ran for 47550 frames Cell Events: 1638 mean_circ: 0.926406
Ran for 48050 frames Cell Events: 1650 mean_circ: 0.926365
Ran for 49550 frames Cell Events: 1712 mean_circ: 0.926515
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Ran for 51050 frames Cell Events: 1763 mean_circ: 0.926472
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Ran for 52050 frames Cell Events: 1800 mean_circ: 0.925995
Ran for 52550 frames Cell Events: 1828 mean_circ: 0.925803
Ran for 53050 frames Cell Events: 1850 mean_circ: 0.925793
Ran for 53550 frames Cell Events: 1876 mean_circ: 0.925751
Ran for 54050 frames Cell Events: 1901 mean_circ: 0.925658
Ran for 54550 frames Cell Events: 1934 mean_circ: 0.925792
Ran for 55050 frames Cell Events: 1951 mean_circ: 0.925943
Ran for 55550 frames Cell Events: 1962 mean_circ: 0.926034
Ran for 56050 frames Cell Events: 1974 mean_circ: 0.925906
Ran for 56550 frames Cell Events: 1991 mean_circ: 0.925922
Ran for 57050 frames Cell Events: 2004 mean_circ: 0.925992
Ran for 57550 frames Cell Events: 2024 mean_circ: 0.926082
Ran for 58050 frames Cell Events: 2044 mean_circ: 0.926123
Ran for 58550 frames Cell Events: 2056 mean_circ: 0.926253
Ran for 60050 frames Cell Events: 2119 mean_circ: 0.926218
Ran for 60550 frames Cell Events: 2140 mean_circ: 0.926278
Ran for 61050 frames Cell Events: 2151 mean_circ: 0.926215
Ran for 61550 frames Cell Events: 2176 mean_circ: 0.926069
Ran for 62050 frames Cell Events: 2198 mean_circ: 0.926299
Ran for 62550 frames Cell Events: 2222 mean_circ: 0.926249
Ran for 63050 frames Cell Events: 2237 mean_circ: 0.926164
Ran for 63550 frames Cell Events: 2257 mean_circ: 0.926333
Ran for 64050 frames Cell Events: 2278 mean_circ: 0.926399
Ran for 64550 frames Cell Events: 2298 mean_circ: 0.92628
Ran for 65550 frames Cell Events: 2362 mean_circ: 0.925949
Ran for 66050 frames Cell Events: 2382 mean_circ: 0.925983
Ran for 66550 frames Cell Events: 2399 mean_circ: 0.926184
Ran for 67050 frames Cell Events: 2425 mean_circ: 0.925997
Ran for 68050 frames Cell Events: 2456 mean_circ: 0.925891
Ran for 68550 frames Cell Events: 2477 mean_circ: 0.925905
Ran for 69550 frames Cell Events: 2525 mean_circ: 0.925751
Ran for 70050 frames Cell Events: 2541 mean_circ: 0.925853
Ran for 71050 frames Cell Events: 2590 mean_circ: 0.925872
Ran for 71550 frames Cell Events: 2608 mean_circ: 0.925983
Ran for 72050 frames Cell Events: 2631 mean_circ: 0.926082
Ran for 73050 frames Cell Events: 2660 mean_circ: 0.925984
Ran for 74050 frames Cell Events: 2707 mean_circ: 0.926108
Ran for 74550 frames Cell Events: 2724 mean_circ: 0.926181
Ran for 75050 frames Cell Events: 2737 mean_circ: 0.926073
Ran for 75550 frames Cell Events: 2755 mean_circ: 0.926114
Ran for 76050 frames Cell Events: 2772 mean_circ: 0.926121
Ran for 76550 frames Cell Events: 2792 mean_circ: 0.926159
Ran for 77050 frames Cell Events: 2809 mean_circ: 0.926178
Ran for 77550 frames Cell Events: 2817 mean_circ: 0.926158
Ran for 78050 frames Cell Events: 2846 mean_circ: 0.926126
Ran for 78550 frames Cell Events: 2863 mean_circ: 0.926044
Ran for 80050 frames Cell Events: 2941 mean_circ: 0.926095
Ran for 80550 frames Cell Events: 2952 mean_circ: 0.926085
Ran for 81050 frames Cell Events: 2963 mean_circ: 0.926022
Ran for 81550 frames Cell Events: 2976 mean_circ: 0.926012
Ran for 82050 frames Cell Events: 2993 mean_circ: 0.925947
Ran for 83050 frames Cell Events: 3029 mean_circ: 0.92562
Ran for 83550 frames Cell Events: 3054 mean_circ: 0.925517
Ran for 84050 frames Cell Events: 3072 mean_circ: 0.925356
Ran for 84550 frames Cell Events: 3080 mean_circ: 0.92539
Ran for 86550 frames Cell Events: 3140 mean_circ: 0.925564
Ran for 87050 frames Cell Events: 3155 mean_circ: 0.925603
Ran for 88050 frames Cell Events: 3189 mean_circ: 0.92565
Ran for 88550 frames Cell Events: 3214 mean_circ: 0.925756
Ran for 89050 frames Cell Events: 3228 mean_circ: 0.925889
Ran for 89550 frames Cell Events: 3240 mean_circ: 0.925823
Ran for 90050 frames Cell Events: 3256 mean_circ: 0.925809
Ran for 90550 frames Cell Events: 3269 mean_circ: 0.925792
Ran for 91550 frames Cell Events: 3313 mean_circ: 0.925795
Ran for 92550 frames Cell Events: 3356 mean_circ: 0.925767
Ran for 93050 frames Cell Events: 3367 mean_circ: 0.925795
Ran for 93550 frames Cell Events: 3395 mean_circ: 0.925743
Ran for 94050 frames Cell Events: 3410 mean_circ: 0.925712
Ran for 94550 frames Cell Events: 3419 mean_circ: 0.925665
Ran for 96050 frames Cell Events: 3473 mean_circ: 0.925563
Ran for 96550 frames Cell Events: 3485 mean_circ: 0.925573
Ran for 97050 frames Cell Events: 3500 mean_circ: 0.925541
Ran for 97550 frames Cell Events: 3519 mean_circ: 0.925541
Ran for 98050 frames Cell Events: 3547 mean_circ: 0.925451
Ran for 98550 frames Cell Events: 3560 mean_circ: 0.925526
Ran for 99050 frames Cell Events: 3578 mean_circ: 0.925528
Ran for 99550 frames Cell Events: 3597 mean_circ: 0.925409
Ran for 100550 frames Cell Events: 3626 mean_circ: 0.925247
Ran for 101050 frames Cell Events: 3643 mean_circ: 0.925207
Ran for 101550 frames Cell Events: 3661 mean_circ: 0.925245
Ran for 102050 frames Cell Events: 3676 mean_circ: 0.925316
Ran for 102550 frames Cell Events: 3693 mean_circ: 0.925323
Ran for 103050 frames Cell Events: 3707 mean_circ: 0.925268
Ran for 104550 frames Cell Events: 3768 mean_circ: 0.925322
Ran for 105050 frames Cell Events: 3793 mean_circ: 0.925107
Ran for 105550 frames Cell Events: 3809 mean_circ: 0.92505
Ran for 106050 frames Cell Events: 3831 mean_circ: 0.925039
Ran for 106550 frames Cell Events: 3850 mean_circ: 0.925031
Ran for 107050 frames Cell Events: 3868 mean_circ: 0.92502
Ran for 108050 frames Cell Events: 3906 mean_circ: 0.92502
Ran for 108550 frames Cell Events: 3928 mean_circ: 0.925004
Ran for 109550 frames Cell Events: 3947 mean_circ: 0.925107
Ran for 110050 frames Cell Events: 3969 mean_circ: 0.925073
Ran for 110550 frames Cell Events: 3983 mean_circ: 0.925013
Ran for 111550 frames Cell Events: 4018 mean_circ: 0.925091
Ran for 112050 frames Cell Events: 4041 mean_circ: 0.92498
Ran for 113050 frames Cell Events: 4078 mean_circ: 0.924967
Ran for 114050 frames Cell Events: 4116 mean_circ: 0.925027
Ran for 114550 frames Cell Events: 4132 mean_circ: 0.924939
Ran for 115050 frames Cell Events: 4152 mean_circ: 0.924856
Ran for 115550 frames Cell Events: 4165 mean_circ: 0.924886
Ran for 116550 frames Cell Events: 4210 mean_circ: 0.924914
Ran for 117050 frames Cell Events: 4223 mean_circ: 0.924951
Ran for 117550 frames Cell Events: 4232 mean_circ: 0.924919
Ran for 118550 frames Cell Events: 4270 mean_circ: 0.924994
Ran for 119050 frames Cell Events: 4276 mean_circ: 0.924968
Ran for 120550 frames Cell Events: 4336 mean_circ: 0.924954
Ran for 121550 frames Cell Events: 4376 mean_circ: 0.925064
Ran for 122050 frames Cell Events: 4397 mean_circ: 0.925121
Ran for 122550 frames Cell Events: 4409 mean_circ: 0.925134
Ran for 123050 frames Cell Events: 4416 mean_circ: 0.925157
Ran for 123550 frames Cell Events: 4431 mean_circ: 0.925158
Ran for 124550 frames Cell Events: 4468 mean_circ: 0.925169
Ran for 125050 frames Cell Events: 4475 mean_circ: 0.925141
Ran for 125550 frames Cell Events: 4492 mean_circ: 0.925103
Ran for 126050 frames Cell Events: 4510 mean_circ: 0.925142
Ran for 126550 frames Cell Events: 4532 mean_circ: 0.925183
Ran for 127050 frames Cell Events: 4547 mean_circ: 0.925126
Ran for 127550 frames Cell Events: 4568 mean_circ: 0.925173
Ran for 128050 frames Cell Events: 4580 mean_circ: 0.925167
Ran for 128550 frames Cell Events: 4594 mean_circ: 0.925102
Ran for 129550 frames Cell Events: 4631 mean_circ: 0.925167
Ran for 130550 frames Cell Events: 4678 mean_circ: 0.925232
Ran for 131050 frames Cell Events: 4689 mean_circ: 0.925205
Ran for 131550 frames Cell Events: 4701 mean_circ: 0.925252
Ran for 132050 frames Cell Events: 4716 mean_circ: 0.925247
Ran for 132550 frames Cell Events: 4737 mean_circ: 0.9253
Ran for 133050 frames Cell Events: 4758 mean_circ: 0.925374
Ran for 133550 frames Cell Events: 4779 mean_circ: 0.925404
Ran for 134050 frames Cell Events: 4798 mean_circ: 0.925414
Ran for 135050 frames Cell Events: 4831 mean_circ: 0.925509
Ran for 136050 frames Cell Events: 4867 mean_circ: 0.925542
Ran for 136550 frames Cell Events: 4880 mean_circ: 0.925497
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Ran for 140050 frames Cell Events: 4991 mean_circ: 0.925494
Ran for 141050 frames Cell Events: 5026 mean_circ: 0.925486
Ran for 141550 frames Cell Events: 5043 mean_circ: 0.925437
Ran for 142050 frames Cell Events: 5061 mean_circ: 0.925475
Ran for 142550 frames Cell Events: 5091 mean_circ: 0.925394
Ran for 143050 frames Cell Events: 5109 mean_circ: 0.925247
Ran for 143550 frames Cell Events: 5124 mean_circ: 0.925163
Ran for 144050 frames Cell Events: 5145 mean_circ: 0.925146
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Ran for 146050 frames Cell Events: 5221 mean_circ: 0.925304
Ran for 146550 frames Cell Events: 5234 mean_circ: 0.925277
Ran for 147050 frames Cell Events: 5244 mean_circ: 0.925256
Ran for 148050 frames Cell Events: 5277 mean_circ: 0.925325
Ran for 148550 frames Cell Events: 5296 mean_circ: 0.925351
Ran for 149550 frames Cell Events: 5324 mean_circ: 0.925418
Ran for 150050 frames Cell Events: 5347 mean_circ: 0.925449
Ran for 150550 frames Cell Events: 5363 mean_circ: 0.925459
Ran for 151050 frames Cell Events: 5381 mean_circ: 0.925429
Ran for 151550 frames Cell Events: 5396 mean_circ: 0.925428
Ran for 153550 frames Cell Events: 5475 mean_circ: 0.92525
Ran for 154550 frames Cell Events: 5514 mean_circ: 0.925182
Ran for 155050 frames Cell Events: 5528 mean_circ: 0.925168
Ran for 155550 frames Cell Events: 5542 mean_circ: 0.925167
Ran for 157050 frames Cell Events: 5606 mean_circ: 0.925189
Ran for 157550 frames Cell Events: 5618 mean_circ: 0.925218
Ran for 158050 frames Cell Events: 5639 mean_circ: 0.925206
Ran for 158550 frames Cell Events: 5663 mean_circ: 0.925226
Ran for 160550 frames Cell Events: 5755 mean_circ: 0.925274
Ran for 161050 frames Cell Events: 5762 mean_circ: 0.92528
Ran for 161550 frames Cell Events: 5778 mean_circ: 0.925293
Ran for 162050 frames Cell Events: 5799 mean_circ: 0.925336
Ran for 163050 frames Cell Events: 5831 mean_circ: 0.925319
Ran for 164550 frames Cell Events: 5883 mean_circ: 0.925338
Ran for 165550 frames Cell Events: 5914 mean_circ: 0.925402
Ran for 167050 frames Cell Events: 5970 mean_circ: 0.92536
Ran for 167550 frames Cell Events: 5994 mean_circ: 0.925354
Ran for 168050 frames Cell Events: 6012 mean_circ: 0.925336
Ran for 169050 frames Cell Events: 6037 mean_circ: 0.925331
Ran for 169550 frames Cell Events: 6048 mean_circ: 0.925346
Ran for 170050 frames Cell Events: 6061 mean_circ: 0.925361
Ran for 170550 frames Cell Events: 6074 mean_circ: 0.925359
Ran for 171550 frames Cell Events: 6099 mean_circ: 0.925344
Ran for 172550 frames Cell Events: 6134 mean_circ: 0.925389
Ran for 173050 frames Cell Events: 6154 mean_circ: 0.925382
Ran for 174050 frames Cell Events: 6198 mean_circ: 0.9254
Ran for 175050 frames Cell Events: 6236 mean_circ: 0.925395
Ran for 175550 frames Cell Events: 6250 mean_circ: 0.925369
Ran for 176050 frames Cell Events: 6269 mean_circ: 0.925388
Ran for 177550 frames Cell Events: 6324 mean_circ: 0.925444
Ran for 178050 frames Cell Events: 6338 mean_circ: 0.925414
Ran for 178550 frames Cell Events: 6348 mean_circ: 0.925414
Ran for 179050 frames Cell Events: 6364 mean_circ: 0.925441
Ran for 179550 frames Cell Events: 6378 mean_circ: 0.925479
Ran for 180050 frames Cell Events: 6391 mean_circ: 0.92548
Ran for 181550 frames Cell Events: 6455 mean_circ: 0.925468
Ran for 182050 frames Cell Events: 6470 mean_circ: 0.925454
Ran for 182550 frames Cell Events: 6494 mean_circ: 0.925408
Ran for 183050 frames Cell Events: 6507 mean_circ: 0.925451
Ran for 183550 frames Cell Events: 6527 mean_circ: 0.925445
Ran for 184050 frames Cell Events: 6538 mean_circ: 0.925451
Ran for 184550 frames Cell Events: 6562 mean_circ: 0.925458
Ran for 185050 frames Cell Events: 6572 mean_circ: 0.92543
Ran for 185550 frames Cell Events: 6585 mean_circ: 0.925403
Ran for 186050 frames Cell Events: 6596 mean_circ: 0.925338
Ran for 186550 frames Cell Events: 6612 mean_circ: 0.925302
Ran for 187050 frames Cell Events: 6638 mean_circ: 0.925235
Ran for 187550 frames Cell Events: 6658 mean_circ: 0.925242
Ran for 188550 frames Cell Events: 6687 mean_circ: 0.925289
Ran for 189050 frames Cell Events: 6705 mean_circ: 0.925301
Ran for 191050 frames Cell Events: 6801 mean_circ: 0.925358
Ran for 191550 frames Cell Events: 6817 mean_circ: 0.925345
Ran for 192050 frames Cell Events: 6833 mean_circ: 0.925353
Ran for 192550 frames Cell Events: 6860 mean_circ: 0.925393
Ran for 193050 frames Cell Events: 6875 mean_circ: 0.925411
Ran for 193550 frames Cell Events: 6892 mean_circ: 0.925395
Ran for 194050 frames Cell Events: 6906 mean_circ: 0.925385
Ran for 195050 frames Cell Events: 6940 mean_circ: 0.925353
Ran for 195550 frames Cell Events: 6950 mean_circ: 0.925285
Ran for 196050 frames Cell Events: 6964 mean_circ: 0.925198
Ran for 196550 frames Cell Events: 6984 mean_circ: 0.925246
Ran for 197050 frames Cell Events: 7000 mean_circ: 0.925291
Ran for 197550 frames Cell Events: 7015 mean_circ: 0.925358
Ran for 198050 frames Cell Events: 7034 mean_circ: 0.925342
Ran for 199050 frames Cell Events: 7076 mean_circ: 0.925253
Ran for 200050 frames Cell Events: 7114 mean_circ: 0.925236
Ran for 200550 frames Cell Events: 7126 mean_circ: 0.92523
Ran for 201050 frames Cell Events: 7145 mean_circ: 0.925277
Ran for 202050 frames Cell Events: 7185 mean_circ: 0.925372
Ran for 202550 frames Cell Events: 7209 mean_circ: 0.925359
Ran for 203050 frames Cell Events: 7221 mean_circ: 0.925346
Ran for 203550 frames Cell Events: 7232 mean_circ: 0.92532
Ran for 204050 frames Cell Events: 7252 mean_circ: 0.925299
Ran for 204550 frames Cell Events: 7263 mean_circ: 0.925352
Ran for 205050 frames Cell Events: 7277 mean_circ: 0.925378
Ran for 205550 frames Cell Events: 7306 mean_circ: 0.925413
Ran for 206050 frames Cell Events: 7327 mean_circ: 0.925454
Ran for 206550 frames Cell Events: 7346 mean_circ: 0.925456
Ran for 207050 frames Cell Events: 7371 mean_circ: 0.925444
Ran for 207550 frames Cell Events: 7386 mean_circ: 0.925423
Ran for 208050 frames Cell Events: 7402 mean_circ: 0.925385
Ran for 208550 frames Cell Events: 7418 mean_circ: 0.925362
Ran for 209050 frames Cell Events: 7438 mean_circ: 0.925364
Ran for 209550 frames Cell Events: 7460 mean_circ: 0.925383
Ran for 210050 frames Cell Events: 7473 mean_circ: 0.925388
Ran for 211050 frames Cell Events: 7520 mean_circ: 0.925441
Ran for 211550 frames Cell Events: 7538 mean_circ: 0.925461
Ran for 212550 frames Cell Events: 7577 mean_circ: 0.925426
Ran for 213550 frames Cell Events: 7602 mean_circ: 0.925374
Ran for 214050 frames Cell Events: 7610 mean_circ: 0.925374
Ran for 214550 frames Cell Events: 7626 mean_circ: 0.92534
Ran for 215050 frames Cell Events: 7641 mean_circ: 0.92533
Ran for 215550 frames Cell Events: 7657 mean_circ: 0.925337
Ran for 217050 frames Cell Events: 7714 mean_circ: 0.925324
Ran for 217550 frames Cell Events: 7730 mean_circ: 0.925372
Ran for 218050 frames Cell Events: 7749 mean_circ: 0.925392
Ran for 218550 frames Cell Events: 7771 mean_circ: 0.925397
Ran for 219050 frames Cell Events: 7788 mean_circ: 0.925294
Ran for 220050 frames Cell Events: 7838 mean_circ: 0.925397
Ran for 220550 frames Cell Events: 7854 mean_circ: 0.925407
Ran for 221050 frames Cell Events: 7873 mean_circ: 0.92543
Ran for 221550 frames Cell Events: 7894 mean_circ: 0.925424
Ran for 222050 frames Cell Events: 7921 mean_circ: 0.925401
Ran for 222550 frames Cell Events: 7940 mean_circ: 0.925405
Ran for 223050 frames Cell Events: 7959 mean_circ: 0.925433
Ran for 224550 frames Cell Events: 8008 mean_circ: 0.92546
Ran for 225050 frames Cell Events: 8017 mean_circ: 0.925464
Ran for 225550 frames Cell Events: 8030 mean_circ: 0.925443
Ran for 226050 frames Cell Events: 8040 mean_circ: 0.925443
Ran for 227050 frames Cell Events: 8082 mean_circ: 0.925422
Ran for 228050 frames Cell Events: 8138 mean_circ: 0.925363
Ran for 228550 frames Cell Events: 8149 mean_circ: 0.925363
Ran for 229550 frames Cell Events: 8167 mean_circ: 0.92536
Ran for 230050 frames Cell Events: 8182 mean_circ: 0.925328
Ran for 230550 frames Cell Events: 8201 mean_circ: 0.92531
Ran for 231550 frames Cell Events: 8243 mean_circ: 0.925334
Ran for 232050 frames Cell Events: 8257 mean_circ: 0.92529
Ran for 232550 frames Cell Events: 8272 mean_circ: 0.925306



End this measurment..



Stopping time: 1.327e+009
****************************************
Measurement finished

Mean Circularitiy: 0.925335
Mean Area: 634.709
Mean FL-1 intensity: 2504.21
Mean FL-2 intensity: 3853.36
Mean FL-3 intensity: 0

frames processed: 231670
Total Time: 117068ms
Number of Runs (new bg img) 0
Frames collected: 233927
Skipped frames: 57988
Rescued Frames: 2832517
Samples DAQ: 58481812
Samples written: 116963532
Samples per Channel: 58481766
FPS: 1998.22

Samples per second: 499554
Expected samples/s: 500000

Events: 8313
Events per second: 71.0101
jumped back (PMT): 15
#Frames read, frequency
# 0 frames :309259
# 1 frames :142760
# 2 frames :4387
# 3 frames :1389
# 4 frames :438
# 5 frames :162
# 6 frames :4682
# 7 frames :1471
# 8 frames :1254
# 9 frames :477
# 10 frames :271
# 11 frames :240
# 12 frames :291
# 13 frames :174
# 14 frames :201
# 15 frames :100
# 16 frames :58
# 17 frames :48
# 18 frames :31
# 19 frames :27
# 20 frames :26
# 21 frames :13
# 22 frames :12
# 23 frames :12
# 24 frames :9
# 25 frames :7
# 26 frames :3
# 27 frames :4
# 28 frames :2
# 29 frames :3
# 30 frames :1
# 32 frames :2
# 35 frames :1
# 36 frames :1
# 37 frames :2
# 38 frames :1
# 39 frames :1
# 43 frames :1
# 48 frames :1
# 69 frames :1
# 74 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.9835
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0