Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_12.45.43 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "5a898d09217cbb906b5e68a05a7e3c93",
"name": "M1_20170604_1708_dsRNA_G4_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "10:46:04"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8320 (max 8321) in '8320'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.3035
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.75953e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 37 mean_circ: 0.927686
Ran for 1550 frames Cell Events: 49 mean_circ: 0.93243
Ran for 2050 frames Cell Events: 73 mean_circ: 0.934478
Ran for 2550 frames Cell Events: 87 mean_circ: 0.935661
Ran for 3050 frames Cell Events: 102 mean_circ: 0.938393
Ran for 3550 frames Cell Events: 114 mean_circ: 0.938856
Ran for 4550 frames Cell Events: 160 mean_circ: 0.938352
Ran for 5050 frames Cell Events: 169 mean_circ: 0.938
Ran for 5550 frames Cell Events: 181 mean_circ: 0.938556
Ran for 6050 frames Cell Events: 203 mean_circ: 0.937842
Ran for 6550 frames Cell Events: 222 mean_circ: 0.935194
Ran for 7050 frames Cell Events: 238 mean_circ: 0.933942
Ran for 7550 frames Cell Events: 253 mean_circ: 0.934282
Ran for 8050 frames Cell Events: 274 mean_circ: 0.933868
Ran for 8550 frames Cell Events: 286 mean_circ: 0.933819
Ran for 9050 frames Cell Events: 297 mean_circ: 0.934139
Ran for 9550 frames Cell Events: 307 mean_circ: 0.934704
Ran for 10050 frames Cell Events: 318 mean_circ: 0.934829
Ran for 10550 frames Cell Events: 334 mean_circ: 0.935081
Ran for 12050 frames Cell Events: 365 mean_circ: 0.93516
Ran for 12550 frames Cell Events: 378 mean_circ: 0.935207
Ran for 13050 frames Cell Events: 386 mean_circ: 0.935051
Ran for 14050 frames Cell Events: 422 mean_circ: 0.93486
Ran for 14550 frames Cell Events: 434 mean_circ: 0.934756
Ran for 15050 frames Cell Events: 454 mean_circ: 0.934941
Ran for 15550 frames Cell Events: 470 mean_circ: 0.935135
Ran for 16550 frames Cell Events: 501 mean_circ: 0.934937
Ran for 17550 frames Cell Events: 544 mean_circ: 0.935417
Ran for 18050 frames Cell Events: 555 mean_circ: 0.935307
Ran for 18550 frames Cell Events: 570 mean_circ: 0.934903
Ran for 19550 frames Cell Events: 607 mean_circ: 0.935191
Ran for 20050 frames Cell Events: 632 mean_circ: 0.935503
Ran for 21550 frames Cell Events: 687 mean_circ: 0.935992
Ran for 22050 frames Cell Events: 698 mean_circ: 0.936114
Ran for 22550 frames Cell Events: 712 mean_circ: 0.936055
Ran for 23050 frames Cell Events: 727 mean_circ: 0.936364
Ran for 23550 frames Cell Events: 737 mean_circ: 0.936591
Ran for 24050 frames Cell Events: 748 mean_circ: 0.936822
Ran for 24550 frames Cell Events: 759 mean_circ: 0.937126
Ran for 25550 frames Cell Events: 803 mean_circ: 0.937071
Ran for 26550 frames Cell Events: 840 mean_circ: 0.937093
Ran for 27050 frames Cell Events: 851 mean_circ: 0.937196
Ran for 27550 frames Cell Events: 863 mean_circ: 0.937323
Ran for 28050 frames Cell Events: 882 mean_circ: 0.937126
Ran for 29050 frames Cell Events: 925 mean_circ: 0.937368
Ran for 29550 frames Cell Events: 949 mean_circ: 0.937448
Ran for 30050 frames Cell Events: 968 mean_circ: 0.937537
Ran for 31050 frames Cell Events: 1002 mean_circ: 0.937565
Ran for 31550 frames Cell Events: 1020 mean_circ: 0.93768
Ran for 32050 frames Cell Events: 1041 mean_circ: 0.937688
Ran for 34050 frames Cell Events: 1119 mean_circ: 0.937658
Ran for 35050 frames Cell Events: 1160 mean_circ: 0.937752
Ran for 35550 frames Cell Events: 1168 mean_circ: 0.937704
Ran for 36050 frames Cell Events: 1180 mean_circ: 0.937682
Ran for 36550 frames Cell Events: 1193 mean_circ: 0.937637
Ran for 37050 frames Cell Events: 1204 mean_circ: 0.937643
Ran for 37550 frames Cell Events: 1217 mean_circ: 0.937693
Ran for 38050 frames Cell Events: 1229 mean_circ: 0.937555
Ran for 39050 frames Cell Events: 1255 mean_circ: 0.937444
Ran for 40050 frames Cell Events: 1289 mean_circ: 0.937434
Ran for 41050 frames Cell Events: 1320 mean_circ: 0.93747
Ran for 41550 frames Cell Events: 1331 mean_circ: 0.937494
Ran for 42050 frames Cell Events: 1347 mean_circ: 0.937356
Ran for 42550 frames Cell Events: 1366 mean_circ: 0.93736
Ran for 43050 frames Cell Events: 1380 mean_circ: 0.937367
Ran for 43550 frames Cell Events: 1392 mean_circ: 0.937481
Ran for 44050 frames Cell Events: 1418 mean_circ: 0.937544
Ran for 44550 frames Cell Events: 1432 mean_circ: 0.937302
Ran for 45050 frames Cell Events: 1446 mean_circ: 0.936868
Ran for 46550 frames Cell Events: 1484 mean_circ: 0.936683
Ran for 47050 frames Cell Events: 1493 mean_circ: 0.936807
Ran for 48550 frames Cell Events: 1538 mean_circ: 0.93698
Ran for 49050 frames Cell Events: 1546 mean_circ: 0.93705
Ran for 49550 frames Cell Events: 1562 mean_circ: 0.936908
Ran for 50050 frames Cell Events: 1572 mean_circ: 0.937006
Ran for 50550 frames Cell Events: 1587 mean_circ: 0.937011
Ran for 51550 frames Cell Events: 1620 mean_circ: 0.937321
Ran for 52050 frames Cell Events: 1640 mean_circ: 0.937223
Ran for 52550 frames Cell Events: 1659 mean_circ: 0.937139
Ran for 53050 frames Cell Events: 1673 mean_circ: 0.937161
Ran for 53550 frames Cell Events: 1686 mean_circ: 0.937214
Ran for 54050 frames Cell Events: 1699 mean_circ: 0.937142
Ran for 54550 frames Cell Events: 1708 mean_circ: 0.936972
Ran for 55050 frames Cell Events: 1725 mean_circ: 0.937041
Ran for 55550 frames Cell Events: 1736 mean_circ: 0.937058
Ran for 56050 frames Cell Events: 1750 mean_circ: 0.936995
Ran for 56550 frames Cell Events: 1759 mean_circ: 0.937051
Ran for 57550 frames Cell Events: 1784 mean_circ: 0.937031
Ran for 58050 frames Cell Events: 1801 mean_circ: 0.936933
Ran for 60050 frames Cell Events: 1878 mean_circ: 0.936744
Ran for 61550 frames Cell Events: 1922 mean_circ: 0.93674
Ran for 62050 frames Cell Events: 1927 mean_circ: 0.936799
Ran for 62550 frames Cell Events: 1946 mean_circ: 0.936878
Ran for 63050 frames Cell Events: 1958 mean_circ: 0.936885
Ran for 63550 frames Cell Events: 1972 mean_circ: 0.936842
Ran for 64050 frames Cell Events: 1986 mean_circ: 0.936864
Ran for 64550 frames Cell Events: 1997 mean_circ: 0.936914
Ran for 65050 frames Cell Events: 2013 mean_circ: 0.936825
Ran for 65550 frames Cell Events: 2024 mean_circ: 0.936841
Ran for 66050 frames Cell Events: 2036 mean_circ: 0.936683
Ran for 66550 frames Cell Events: 2051 mean_circ: 0.936483
Ran for 67550 frames Cell Events: 2081 mean_circ: 0.93662
Ran for 69550 frames Cell Events: 2155 mean_circ: 0.936576
Ran for 70050 frames Cell Events: 2168 mean_circ: 0.936639
Ran for 70550 frames Cell Events: 2180 mean_circ: 0.93657
Ran for 71050 frames Cell Events: 2203 mean_circ: 0.936535
Ran for 71550 frames Cell Events: 2220 mean_circ: 0.936489
Ran for 72050 frames Cell Events: 2238 mean_circ: 0.936466
Ran for 72550 frames Cell Events: 2247 mean_circ: 0.936503
Ran for 74050 frames Cell Events: 2293 mean_circ: 0.936606
Ran for 74550 frames Cell Events: 2309 mean_circ: 0.936609
Ran for 76050 frames Cell Events: 2375 mean_circ: 0.936641
Ran for 76550 frames Cell Events: 2384 mean_circ: 0.936497
Ran for 77050 frames Cell Events: 2400 mean_circ: 0.936459
Ran for 77550 frames Cell Events: 2413 mean_circ: 0.936472
Ran for 78050 frames Cell Events: 2443 mean_circ: 0.93653
Ran for 78550 frames Cell Events: 2465 mean_circ: 0.93648
Ran for 79550 frames Cell Events: 2496 mean_circ: 0.936525
Ran for 80050 frames Cell Events: 2524 mean_circ: 0.93662
Ran for 81050 frames Cell Events: 2558 mean_circ: 0.936699
Ran for 81550 frames Cell Events: 2576 mean_circ: 0.936772
Ran for 82050 frames Cell Events: 2593 mean_circ: 0.936741
Ran for 83550 frames Cell Events: 2649 mean_circ: 0.936689
Ran for 85050 frames Cell Events: 2693 mean_circ: 0.936631
Ran for 85550 frames Cell Events: 2712 mean_circ: 0.936744
Ran for 86050 frames Cell Events: 2725 mean_circ: 0.93677
Ran for 86550 frames Cell Events: 2747 mean_circ: 0.93675
Ran for 87050 frames Cell Events: 2764 mean_circ: 0.936712
Ran for 87550 frames Cell Events: 2783 mean_circ: 0.936746
Ran for 88050 frames Cell Events: 2803 mean_circ: 0.936697
Ran for 88550 frames Cell Events: 2820 mean_circ: 0.936583
Ran for 89050 frames Cell Events: 2831 mean_circ: 0.936586
Ran for 90050 frames Cell Events: 2868 mean_circ: 0.936617
Ran for 90550 frames Cell Events: 2885 mean_circ: 0.936534
Ran for 91050 frames Cell Events: 2903 mean_circ: 0.936582
Ran for 91550 frames Cell Events: 2919 mean_circ: 0.93664
Ran for 93050 frames Cell Events: 2978 mean_circ: 0.936771
Ran for 94550 frames Cell Events: 3028 mean_circ: 0.936832
Ran for 95050 frames Cell Events: 3035 mean_circ: 0.936859
Ran for 95550 frames Cell Events: 3050 mean_circ: 0.936897
Ran for 96050 frames Cell Events: 3065 mean_circ: 0.936893
Ran for 96550 frames Cell Events: 3079 mean_circ: 0.936943
Ran for 97550 frames Cell Events: 3113 mean_circ: 0.936991
Ran for 98050 frames Cell Events: 3129 mean_circ: 0.936957
Ran for 98550 frames Cell Events: 3142 mean_circ: 0.936929
Ran for 99050 frames Cell Events: 3152 mean_circ: 0.936957
Ran for 99550 frames Cell Events: 3167 mean_circ: 0.936969
Ran for 100550 frames Cell Events: 3199 mean_circ: 0.93701
Ran for 101050 frames Cell Events: 3210 mean_circ: 0.937026
Ran for 101550 frames Cell Events: 3225 mean_circ: 0.936979
Ran for 102550 frames Cell Events: 3254 mean_circ: 0.936946
Ran for 103050 frames Cell Events: 3273 mean_circ: 0.936925
Ran for 103550 frames Cell Events: 3290 mean_circ: 0.937009
Ran for 106050 frames Cell Events: 3379 mean_circ: 0.936972
Ran for 106550 frames Cell Events: 3400 mean_circ: 0.936947
Ran for 107050 frames Cell Events: 3410 mean_circ: 0.936956
Ran for 108050 frames Cell Events: 3433 mean_circ: 0.936922
Ran for 109050 frames Cell Events: 3445 mean_circ: 0.93695
Ran for 109550 frames Cell Events: 3456 mean_circ: 0.936973
Ran for 110050 frames Cell Events: 3465 mean_circ: 0.937018
Ran for 110550 frames Cell Events: 3480 mean_circ: 0.936979
Ran for 111550 frames Cell Events: 3498 mean_circ: 0.936861
Ran for 113050 frames Cell Events: 3546 mean_circ: 0.936685
Ran for 114050 frames Cell Events: 3574 mean_circ: 0.936705
Ran for 114550 frames Cell Events: 3588 mean_circ: 0.936728
Ran for 115050 frames Cell Events: 3603 mean_circ: 0.936653
Ran for 115550 frames Cell Events: 3617 mean_circ: 0.936706
Ran for 116050 frames Cell Events: 3634 mean_circ: 0.936714
Ran for 116550 frames Cell Events: 3649 mean_circ: 0.936702
Ran for 117050 frames Cell Events: 3667 mean_circ: 0.936709
Ran for 118050 frames Cell Events: 3696 mean_circ: 0.936725
Ran for 118550 frames Cell Events: 3717 mean_circ: 0.936831
Ran for 119550 frames Cell Events: 3747 mean_circ: 0.936899
Ran for 120550 frames Cell Events: 3773 mean_circ: 0.936877
Ran for 121050 frames Cell Events: 3784 mean_circ: 0.936861
Ran for 121550 frames Cell Events: 3798 mean_circ: 0.936909
Ran for 122050 frames Cell Events: 3818 mean_circ: 0.936872
Ran for 122550 frames Cell Events: 3833 mean_circ: 0.936823
Ran for 123050 frames Cell Events: 3854 mean_circ: 0.936853
Ran for 124050 frames Cell Events: 3884 mean_circ: 0.936927
Ran for 124550 frames Cell Events: 3900 mean_circ: 0.936916
Ran for 125050 frames Cell Events: 3914 mean_circ: 0.936904
Ran for 125550 frames Cell Events: 3924 mean_circ: 0.936844
Ran for 126050 frames Cell Events: 3932 mean_circ: 0.936845
Ran for 127050 frames Cell Events: 3970 mean_circ: 0.936852
Ran for 127550 frames Cell Events: 3985 mean_circ: 0.936811
Ran for 128050 frames Cell Events: 4004 mean_circ: 0.93688
Ran for 129550 frames Cell Events: 4055 mean_circ: 0.936983
Ran for 130050 frames Cell Events: 4073 mean_circ: 0.936964
Ran for 130550 frames Cell Events: 4096 mean_circ: 0.936984
Ran for 131050 frames Cell Events: 4112 mean_circ: 0.936998
Ran for 131550 frames Cell Events: 4124 mean_circ: 0.937047
Ran for 132050 frames Cell Events: 4144 mean_circ: 0.937098
Ran for 132550 frames Cell Events: 4160 mean_circ: 0.9371
Ran for 134050 frames Cell Events: 4217 mean_circ: 0.936961
Ran for 135050 frames Cell Events: 4246 mean_circ: 0.936918
Ran for 136550 frames Cell Events: 4297 mean_circ: 0.936917
Ran for 137050 frames Cell Events: 4313 mean_circ: 0.936881
Ran for 137550 frames Cell Events: 4336 mean_circ: 0.936842
Ran for 138550 frames Cell Events: 4372 mean_circ: 0.936841
Ran for 139050 frames Cell Events: 4381 mean_circ: 0.936876
Ran for 139550 frames Cell Events: 4401 mean_circ: 0.936882
Ran for 140050 frames Cell Events: 4423 mean_circ: 0.936811
Ran for 141050 frames Cell Events: 4465 mean_circ: 0.936887
Ran for 141550 frames Cell Events: 4482 mean_circ: 0.936882
Ran for 142050 frames Cell Events: 4496 mean_circ: 0.93693
Ran for 142550 frames Cell Events: 4512 mean_circ: 0.936921
Ran for 143050 frames Cell Events: 4531 mean_circ: 0.936928
Ran for 143550 frames Cell Events: 4549 mean_circ: 0.936953
Ran for 144550 frames Cell Events: 4584 mean_circ: 0.936843
Ran for 146050 frames Cell Events: 4624 mean_circ: 0.9368
Ran for 146550 frames Cell Events: 4637 mean_circ: 0.936838
Ran for 147050 frames Cell Events: 4659 mean_circ: 0.936886
Ran for 147550 frames Cell Events: 4680 mean_circ: 0.936842
Ran for 148050 frames Cell Events: 4700 mean_circ: 0.936879
Ran for 148550 frames Cell Events: 4723 mean_circ: 0.936794
Ran for 149050 frames Cell Events: 4741 mean_circ: 0.936819
Ran for 149550 frames Cell Events: 4757 mean_circ: 0.936828
Ran for 150050 frames Cell Events: 4770 mean_circ: 0.936848
Ran for 150550 frames Cell Events: 4783 mean_circ: 0.936809
Ran for 151050 frames Cell Events: 4806 mean_circ: 0.93684
Ran for 152050 frames Cell Events: 4843 mean_circ: 0.936825
Ran for 152550 frames Cell Events: 4855 mean_circ: 0.936737
Ran for 153050 frames Cell Events: 4868 mean_circ: 0.936705
Ran for 153550 frames Cell Events: 4888 mean_circ: 0.936748
Ran for 154550 frames Cell Events: 4923 mean_circ: 0.936779
Ran for 155550 frames Cell Events: 4953 mean_circ: 0.9368
Ran for 156050 frames Cell Events: 4972 mean_circ: 0.936819
Ran for 156550 frames Cell Events: 4988 mean_circ: 0.9368
Ran for 157550 frames Cell Events: 5015 mean_circ: 0.93671
Ran for 158050 frames Cell Events: 5030 mean_circ: 0.936697
Ran for 158550 frames Cell Events: 5044 mean_circ: 0.936684
Ran for 159050 frames Cell Events: 5061 mean_circ: 0.936653
Ran for 159550 frames Cell Events: 5077 mean_circ: 0.936686
Ran for 160050 frames Cell Events: 5099 mean_circ: 0.936632
Ran for 160550 frames Cell Events: 5111 mean_circ: 0.936642
Ran for 161050 frames Cell Events: 5122 mean_circ: 0.936623
Ran for 162550 frames Cell Events: 5171 mean_circ: 0.936538
Ran for 163550 frames Cell Events: 5199 mean_circ: 0.936589
Ran for 164050 frames Cell Events: 5209 mean_circ: 0.936582
Ran for 164550 frames Cell Events: 5234 mean_circ: 0.936584
Ran for 165050 frames Cell Events: 5258 mean_circ: 0.936567
Ran for 165550 frames Cell Events: 5277 mean_circ: 0.936599
Ran for 166050 frames Cell Events: 5291 mean_circ: 0.93661
Ran for 167050 frames Cell Events: 5337 mean_circ: 0.936662
Ran for 167550 frames Cell Events: 5349 mean_circ: 0.936652
Ran for 168550 frames Cell Events: 5375 mean_circ: 0.936692
Ran for 169050 frames Cell Events: 5388 mean_circ: 0.936637
Ran for 169550 frames Cell Events: 5407 mean_circ: 0.93655
Ran for 170050 frames Cell Events: 5421 mean_circ: 0.936575
Ran for 171550 frames Cell Events: 5483 mean_circ: 0.936525
Ran for 172050 frames Cell Events: 5500 mean_circ: 0.936514
Ran for 172550 frames Cell Events: 5515 mean_circ: 0.936476
Ran for 173050 frames Cell Events: 5528 mean_circ: 0.936482
Ran for 174050 frames Cell Events: 5556 mean_circ: 0.93653
Ran for 174550 frames Cell Events: 5569 mean_circ: 0.936522
Ran for 175050 frames Cell Events: 5582 mean_circ: 0.936531
Ran for 175550 frames Cell Events: 5599 mean_circ: 0.936544
Ran for 176050 frames Cell Events: 5611 mean_circ: 0.936531
Ran for 176550 frames Cell Events: 5636 mean_circ: 0.936527
Ran for 177550 frames Cell Events: 5654 mean_circ: 0.936524
Ran for 178050 frames Cell Events: 5671 mean_circ: 0.936509
Ran for 179050 frames Cell Events: 5712 mean_circ: 0.936504
Ran for 179550 frames Cell Events: 5727 mean_circ: 0.936475
Ran for 180050 frames Cell Events: 5739 mean_circ: 0.936476
Ran for 180550 frames Cell Events: 5751 mean_circ: 0.936439
Ran for 181050 frames Cell Events: 5764 mean_circ: 0.936453
Ran for 182550 frames Cell Events: 5812 mean_circ: 0.936346
Ran for 183550 frames Cell Events: 5841 mean_circ: 0.936319
Ran for 184050 frames Cell Events: 5852 mean_circ: 0.936322
Ran for 184550 frames Cell Events: 5870 mean_circ: 0.936341
Ran for 185050 frames Cell Events: 5892 mean_circ: 0.936351
Ran for 185550 frames Cell Events: 5903 mean_circ: 0.936365
Ran for 186050 frames Cell Events: 5924 mean_circ: 0.936363
Ran for 186550 frames Cell Events: 5934 mean_circ: 0.936344
Ran for 187050 frames Cell Events: 5954 mean_circ: 0.936372
Ran for 188550 frames Cell Events: 6017 mean_circ: 0.936353
Ran for 189050 frames Cell Events: 6026 mean_circ: 0.936326
Ran for 189550 frames Cell Events: 6043 mean_circ: 0.936299
Ran for 190550 frames Cell Events: 6079 mean_circ: 0.936198
Ran for 191550 frames Cell Events: 6113 mean_circ: 0.936206
Ran for 193550 frames Cell Events: 6187 mean_circ: 0.936228
Ran for 194050 frames Cell Events: 6213 mean_circ: 0.936175
Ran for 194550 frames Cell Events: 6234 mean_circ: 0.93615
Ran for 195050 frames Cell Events: 6245 mean_circ: 0.936167
Ran for 195550 frames Cell Events: 6253 mean_circ: 0.936169
Ran for 196050 frames Cell Events: 6267 mean_circ: 0.936168
Ran for 196550 frames Cell Events: 6283 mean_circ: 0.936151
Ran for 197050 frames Cell Events: 6301 mean_circ: 0.936149
Ran for 198050 frames Cell Events: 6328 mean_circ: 0.93614
Ran for 198550 frames Cell Events: 6340 mean_circ: 0.936167
Ran for 199550 frames Cell Events: 6388 mean_circ: 0.936192
Ran for 200550 frames Cell Events: 6417 mean_circ: 0.936175
Ran for 201050 frames Cell Events: 6429 mean_circ: 0.936173
Ran for 202050 frames Cell Events: 6473 mean_circ: 0.936123
Ran for 202550 frames Cell Events: 6479 mean_circ: 0.936136
Ran for 203550 frames Cell Events: 6514 mean_circ: 0.936101
Ran for 204050 frames Cell Events: 6527 mean_circ: 0.936129
Ran for 204550 frames Cell Events: 6543 mean_circ: 0.936134
Ran for 205050 frames Cell Events: 6559 mean_circ: 0.936104
Ran for 205550 frames Cell Events: 6576 mean_circ: 0.936125
Ran for 206050 frames Cell Events: 6596 mean_circ: 0.936169
Ran for 206550 frames Cell Events: 6610 mean_circ: 0.936194
Ran for 207050 frames Cell Events: 6629 mean_circ: 0.936168
Ran for 208550 frames Cell Events: 6688 mean_circ: 0.936155
Ran for 209050 frames Cell Events: 6702 mean_circ: 0.936147
Ran for 209550 frames Cell Events: 6719 mean_circ: 0.936122
Ran for 210050 frames Cell Events: 6731 mean_circ: 0.936135
Ran for 210550 frames Cell Events: 6744 mean_circ: 0.936141
Ran for 211050 frames Cell Events: 6758 mean_circ: 0.936137
Ran for 211550 frames Cell Events: 6773 mean_circ: 0.936134
Ran for 212050 frames Cell Events: 6789 mean_circ: 0.936166
Ran for 212550 frames Cell Events: 6808 mean_circ: 0.936154
Ran for 213050 frames Cell Events: 6822 mean_circ: 0.936104
Ran for 213550 frames Cell Events: 6841 mean_circ: 0.936102
Ran for 214550 frames Cell Events: 6885 mean_circ: 0.936089
Ran for 215050 frames Cell Events: 6901 mean_circ: 0.936104
Ran for 216050 frames Cell Events: 6928 mean_circ: 0.936048
Ran for 216550 frames Cell Events: 6939 mean_circ: 0.936038
Ran for 217050 frames Cell Events: 6949 mean_circ: 0.93605
Ran for 220550 frames Cell Events: 7081 mean_circ: 0.935982
Ran for 221050 frames Cell Events: 7099 mean_circ: 0.935934
Ran for 221550 frames Cell Events: 7117 mean_circ: 0.93591
Ran for 222050 frames Cell Events: 7136 mean_circ: 0.935929
Ran for 222550 frames Cell Events: 7152 mean_circ: 0.935861
Ran for 224050 frames Cell Events: 7193 mean_circ: 0.935914
Ran for 225050 frames Cell Events: 7239 mean_circ: 0.935908
Ran for 225550 frames Cell Events: 7254 mean_circ: 0.935913
Ran for 226050 frames Cell Events: 7272 mean_circ: 0.935923
Ran for 226550 frames Cell Events: 7293 mean_circ: 0.935888
Ran for 227050 frames Cell Events: 7302 mean_circ: 0.935898
Ran for 228050 frames Cell Events: 7331 mean_circ: 0.935824
Ran for 228550 frames Cell Events: 7353 mean_circ: 0.935798
Ran for 229050 frames Cell Events: 7371 mean_circ: 0.935832
Ran for 229550 frames Cell Events: 7383 mean_circ: 0.935803
Ran for 230050 frames Cell Events: 7403 mean_circ: 0.935808
Ran for 230550 frames Cell Events: 7424 mean_circ: 0.935798
Ran for 231550 frames Cell Events: 7469 mean_circ: 0.935758
Ran for 233050 frames Cell Events: 7509 mean_circ: 0.9358
Ran for 233550 frames Cell Events: 7530 mean_circ: 0.935791
Ran for 234050 frames Cell Events: 7544 mean_circ: 0.935803
Ran for 235050 frames Cell Events: 7572 mean_circ: 0.935843
Ran for 235550 frames Cell Events: 7597 mean_circ: 0.935864
Ran for 236050 frames Cell Events: 7613 mean_circ: 0.935881
Ran for 236550 frames Cell Events: 7632 mean_circ: 0.935893
Ran for 237050 frames Cell Events: 7649 mean_circ: 0.935887
Ran for 237550 frames Cell Events: 7668 mean_circ: 0.935908
Ran for 238050 frames Cell Events: 7682 mean_circ: 0.935927
Ran for 238550 frames Cell Events: 7697 mean_circ: 0.935908
Ran for 239050 frames Cell Events: 7712 mean_circ: 0.935886
Ran for 239550 frames Cell Events: 7737 mean_circ: 0.935825
Ran for 240050 frames Cell Events: 7749 mean_circ: 0.935836
Ran for 240550 frames Cell Events: 7763 mean_circ: 0.935806
Ran for 241550 frames Cell Events: 7837 mean_circ: 0.93573
Ran for 242050 frames Cell Events: 7864 mean_circ: 0.935758
Ran for 242550 frames Cell Events: 7880 mean_circ: 0.935742
Ran for 243050 frames Cell Events: 7896 mean_circ: 0.935735
Ran for 243550 frames Cell Events: 7925 mean_circ: 0.93574
Ran for 244050 frames Cell Events: 7937 mean_circ: 0.935757
Ran for 245050 frames Cell Events: 7960 mean_circ: 0.935739
Ran for 245550 frames Cell Events: 7982 mean_circ: 0.935725
Ran for 246050 frames Cell Events: 7998 mean_circ: 0.935698
Ran for 247050 frames Cell Events: 8028 mean_circ: 0.935655
Ran for 248050 frames Cell Events: 8058 mean_circ: 0.935691
Ran for 248550 frames Cell Events: 8069 mean_circ: 0.935698
Ran for 249050 frames Cell Events: 8096 mean_circ: 0.935727
Ran for 249550 frames Cell Events: 8115 mean_circ: 0.935715
Ran for 250050 frames Cell Events: 8132 mean_circ: 0.935728
Ran for 250550 frames Cell Events: 8141 mean_circ: 0.935741
Ran for 251050 frames Cell Events: 8158 mean_circ: 0.935755
Ran for 251550 frames Cell Events: 8170 mean_circ: 0.935768
Ran for 252550 frames Cell Events: 8192 mean_circ: 0.935764
Ran for 253550 frames Cell Events: 8224 mean_circ: 0.935799
Ran for 254550 frames Cell Events: 8258 mean_circ: 0.935825
Ran for 255550 frames Cell Events: 8296 mean_circ: 0.935838
Ran for 256050 frames Cell Events: 8308 mean_circ: 0.935858



End this measurment..



Stopping time: 1.75966e+009
****************************************
Measurement finished

Mean Circularitiy: 0.935855
Mean Area: 607.643
Mean FL-1 intensity: 3283.83
Mean FL-2 intensity: 4386.27
Mean FL-3 intensity: 0

frames processed: 254049
Total Time: 128265ms
Number of Runs (new bg img) 0
Frames collected: 256410
Skipped frames: 91035
Rescued Frames: 3059852
Samples DAQ: 64104614
Samples written: 128204960
Samples per Channel: 64102480
FPS: 1999.06

Samples per second: 499765
Expected samples/s: 500000

Events: 8321
Events per second: 64.8733
jumped back (PMT): 9
#Frames read, frequency
# 0 frames :344048
# 1 frames :150525
# 2 frames :5721
# 3 frames :1679
# 4 frames :781
# 5 frames :286
# 6 frames :3116
# 7 frames :2086
# 8 frames :1372
# 9 frames :620
# 10 frames :731
# 11 frames :449
# 12 frames :462
# 13 frames :188
# 14 frames :145
# 15 frames :131
# 16 frames :101
# 17 frames :95
# 18 frames :57
# 19 frames :30
# 20 frames :35
# 21 frames :30
# 22 frames :25
# 23 frames :15
# 24 frames :12
# 25 frames :6
# 26 frames :3
# 27 frames :10
# 28 frames :2
# 29 frames :4
# 30 frames :2
# 31 frames :1
# 33 frames :1
# 34 frames :1
# 35 frames :1
# 37 frames :1
# 38 frames :1
# 39 frames :1
# 43 frames :1
# 45 frames :1
# 58 frames :1
# 69 frames :1
# 70 frames :1
# 80 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.3035
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0