Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_12.52.39 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "f751513f85d8e730e43ece789b3bd5b6",
"name": "M1_20170604_1848_dsRNA_H7_maybe_mix_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "10:53:04"
}
}
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.1966
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.76555e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.93151
Ran for 550 frames Cell Events: 14 mean_circ: 0.947837
Ran for 4550 frames Cell Events: 147 mean_circ: 0.939644
Ran for 6050 frames Cell Events: 195 mean_circ: 0.937787
Ran for 6550 frames Cell Events: 220 mean_circ: 0.937787
Ran for 7050 frames Cell Events: 228 mean_circ: 0.939473
Ran for 8050 frames Cell Events: 258 mean_circ: 0.940191
Ran for 9550 frames Cell Events: 317 mean_circ: 0.939792
Ran for 10550 frames Cell Events: 353 mean_circ: 0.939788
Ran for 11050 frames Cell Events: 372 mean_circ: 0.940488
Ran for 12050 frames Cell Events: 414 mean_circ: 0.940684
Ran for 13050 frames Cell Events: 444 mean_circ: 0.940687
Ran for 13550 frames Cell Events: 456 mean_circ: 0.940915
Ran for 14050 frames Cell Events: 466 mean_circ: 0.940812
Ran for 15050 frames Cell Events: 512 mean_circ: 0.940987
Ran for 16050 frames Cell Events: 543 mean_circ: 0.941563
Ran for 18050 frames Cell Events: 610 mean_circ: 0.941194
Ran for 18550 frames Cell Events: 628 mean_circ: 0.941359
Ran for 19050 frames Cell Events: 639 mean_circ: 0.941438
Ran for 20050 frames Cell Events: 670 mean_circ: 0.941636
Ran for 20550 frames Cell Events: 680 mean_circ: 0.941759
Ran for 22050 frames Cell Events: 727 mean_circ: 0.941654
Ran for 22550 frames Cell Events: 745 mean_circ: 0.94186
Ran for 23050 frames Cell Events: 762 mean_circ: 0.941724
Ran for 24050 frames Cell Events: 801 mean_circ: 0.941527
Ran for 24550 frames Cell Events: 816 mean_circ: 0.941481
Ran for 26050 frames Cell Events: 866 mean_circ: 0.941823
Ran for 26550 frames Cell Events: 886 mean_circ: 0.941962
Ran for 27050 frames Cell Events: 907 mean_circ: 0.94219
Ran for 28050 frames Cell Events: 936 mean_circ: 0.942311
Ran for 28550 frames Cell Events: 946 mean_circ: 0.942514
Ran for 29050 frames Cell Events: 964 mean_circ: 0.942411
Ran for 31550 frames Cell Events: 1050 mean_circ: 0.942015
Ran for 32050 frames Cell Events: 1063 mean_circ: 0.94205
Ran for 33050 frames Cell Events: 1089 mean_circ: 0.942119
Ran for 33550 frames Cell Events: 1110 mean_circ: 0.942251
Ran for 34050 frames Cell Events: 1127 mean_circ: 0.942402
Ran for 34550 frames Cell Events: 1142 mean_circ: 0.94254
Ran for 36050 frames Cell Events: 1189 mean_circ: 0.942513
Ran for 36550 frames Cell Events: 1206 mean_circ: 0.942532
Ran for 37050 frames Cell Events: 1213 mean_circ: 0.942712
Ran for 38050 frames Cell Events: 1257 mean_circ: 0.942606
Ran for 39050 frames Cell Events: 1303 mean_circ: 0.942853
Ran for 40050 frames Cell Events: 1337 mean_circ: 0.942724
Ran for 40550 frames Cell Events: 1347 mean_circ: 0.942846
Ran for 41550 frames Cell Events: 1385 mean_circ: 0.942764
Ran for 43050 frames Cell Events: 1444 mean_circ: 0.942783
Ran for 43550 frames Cell Events: 1455 mean_circ: 0.942587
Ran for 44050 frames Cell Events: 1465 mean_circ: 0.942649
Ran for 44550 frames Cell Events: 1482 mean_circ: 0.942687
Ran for 46550 frames Cell Events: 1554 mean_circ: 0.94274
Ran for 47050 frames Cell Events: 1564 mean_circ: 0.942844
Ran for 48550 frames Cell Events: 1613 mean_circ: 0.943023
Ran for 50050 frames Cell Events: 1653 mean_circ: 0.943096
Ran for 50550 frames Cell Events: 1678 mean_circ: 0.942999
Ran for 51550 frames Cell Events: 1716 mean_circ: 0.943068
Ran for 53550 frames Cell Events: 1773 mean_circ: 0.943042
Ran for 54550 frames Cell Events: 1801 mean_circ: 0.943086
Ran for 55550 frames Cell Events: 1840 mean_circ: 0.943172
Ran for 56550 frames Cell Events: 1880 mean_circ: 0.943268
Ran for 58550 frames Cell Events: 1955 mean_circ: 0.943027
Ran for 59550 frames Cell Events: 1979 mean_circ: 0.942829
Ran for 60550 frames Cell Events: 2019 mean_circ: 0.942794
Ran for 62050 frames Cell Events: 2058 mean_circ: 0.94284
Ran for 62550 frames Cell Events: 2078 mean_circ: 0.942874
Ran for 63050 frames Cell Events: 2092 mean_circ: 0.942887
Ran for 66050 frames Cell Events: 2195 mean_circ: 0.943042
Ran for 66550 frames Cell Events: 2205 mean_circ: 0.943009
Ran for 67050 frames Cell Events: 2222 mean_circ: 0.943037
Ran for 68050 frames Cell Events: 2247 mean_circ: 0.942861
Ran for 69050 frames Cell Events: 2281 mean_circ: 0.942895
Ran for 69550 frames Cell Events: 2293 mean_circ: 0.94292
Ran for 70550 frames Cell Events: 2325 mean_circ: 0.942842
Ran for 72050 frames Cell Events: 2375 mean_circ: 0.942919
Ran for 72550 frames Cell Events: 2389 mean_circ: 0.942848
Ran for 73050 frames Cell Events: 2406 mean_circ: 0.94292
Ran for 73550 frames Cell Events: 2419 mean_circ: 0.942911
Ran for 74050 frames Cell Events: 2428 mean_circ: 0.942905
Ran for 76550 frames Cell Events: 2533 mean_circ: 0.942904
Ran for 77550 frames Cell Events: 2571 mean_circ: 0.942844
Ran for 78050 frames Cell Events: 2582 mean_circ: 0.942853
Ran for 79050 frames Cell Events: 2624 mean_circ: 0.942735
Ran for 79550 frames Cell Events: 2635 mean_circ: 0.942725
Ran for 80050 frames Cell Events: 2651 mean_circ: 0.942678
Ran for 81550 frames Cell Events: 2697 mean_circ: 0.942489
Ran for 82050 frames Cell Events: 2710 mean_circ: 0.942516
Ran for 82550 frames Cell Events: 2733 mean_circ: 0.942499
Ran for 83550 frames Cell Events: 2761 mean_circ: 0.942517
Ran for 84050 frames Cell Events: 2777 mean_circ: 0.942506
Ran for 85050 frames Cell Events: 2811 mean_circ: 0.942632
Ran for 85550 frames Cell Events: 2836 mean_circ: 0.942688
Ran for 86550 frames Cell Events: 2876 mean_circ: 0.942744
Ran for 87050 frames Cell Events: 2887 mean_circ: 0.942674
Ran for 88050 frames Cell Events: 2916 mean_circ: 0.942688
Ran for 90050 frames Cell Events: 2990 mean_circ: 0.942623
Ran for 91050 frames Cell Events: 3032 mean_circ: 0.942679
Ran for 92050 frames Cell Events: 3068 mean_circ: 0.942747
Ran for 94550 frames Cell Events: 3165 mean_circ: 0.942757
Ran for 95050 frames Cell Events: 3183 mean_circ: 0.942746
Ran for 96050 frames Cell Events: 3223 mean_circ: 0.942759
Ran for 96550 frames Cell Events: 3234 mean_circ: 0.942746
Ran for 97050 frames Cell Events: 3253 mean_circ: 0.942746
Ran for 98050 frames Cell Events: 3295 mean_circ: 0.942644
Ran for 99050 frames Cell Events: 3339 mean_circ: 0.942676
Ran for 99550 frames Cell Events: 3358 mean_circ: 0.94269
Ran for 100550 frames Cell Events: 3402 mean_circ: 0.942644
Ran for 102050 frames Cell Events: 3469 mean_circ: 0.94267
Ran for 103550 frames Cell Events: 3542 mean_circ: 0.942626
Ran for 106050 frames Cell Events: 3633 mean_circ: 0.942613
Ran for 106550 frames Cell Events: 3656 mean_circ: 0.942435
Ran for 108550 frames Cell Events: 3726 mean_circ: 0.942565
Ran for 109050 frames Cell Events: 3742 mean_circ: 0.942565
Ran for 110550 frames Cell Events: 3805 mean_circ: 0.942474
Ran for 112550 frames Cell Events: 3907 mean_circ: 0.942427
Ran for 113550 frames Cell Events: 3947 mean_circ: 0.942429
Ran for 114050 frames Cell Events: 3961 mean_circ: 0.942404
Ran for 115050 frames Cell Events: 3992 mean_circ: 0.942395
Ran for 116050 frames Cell Events: 4026 mean_circ: 0.942355
Ran for 116550 frames Cell Events: 4037 mean_circ: 0.942374
Ran for 117050 frames Cell Events: 4055 mean_circ: 0.942314
Ran for 117550 frames Cell Events: 4070 mean_circ: 0.9423
Ran for 120050 frames Cell Events: 4177 mean_circ: 0.942296
Ran for 121050 frames Cell Events: 4216 mean_circ: 0.942283
Ran for 121550 frames Cell Events: 4226 mean_circ: 0.942287
Ran for 122050 frames Cell Events: 4249 mean_circ: 0.942256
Ran for 122550 frames Cell Events: 4263 mean_circ: 0.942266
Ran for 123550 frames Cell Events: 4316 mean_circ: 0.94231
Ran for 124550 frames Cell Events: 4369 mean_circ: 0.942366
Ran for 125050 frames Cell Events: 4384 mean_circ: 0.942366
Ran for 125550 frames Cell Events: 4408 mean_circ: 0.942372
Ran for 126050 frames Cell Events: 4434 mean_circ: 0.942415
Ran for 126550 frames Cell Events: 4449 mean_circ: 0.94231
Ran for 127050 frames Cell Events: 4468 mean_circ: 0.942269
Ran for 127550 frames Cell Events: 4481 mean_circ: 0.9423
Ran for 128050 frames Cell Events: 4500 mean_circ: 0.942369
Ran for 129050 frames Cell Events: 4536 mean_circ: 0.942409
Ran for 130050 frames Cell Events: 4569 mean_circ: 0.942465
Ran for 130550 frames Cell Events: 4587 mean_circ: 0.942515
Ran for 131050 frames Cell Events: 4605 mean_circ: 0.942437
Ran for 132050 frames Cell Events: 4639 mean_circ: 0.942439
Ran for 134050 frames Cell Events: 4729 mean_circ: 0.942501
Ran for 134550 frames Cell Events: 4744 mean_circ: 0.942548
Ran for 135050 frames Cell Events: 4759 mean_circ: 0.942572
Ran for 136050 frames Cell Events: 4802 mean_circ: 0.9426
Ran for 137550 frames Cell Events: 4878 mean_circ: 0.942623
Ran for 139050 frames Cell Events: 4934 mean_circ: 0.942558
Ran for 140050 frames Cell Events: 4971 mean_circ: 0.942594
Ran for 141550 frames Cell Events: 5031 mean_circ: 0.942571
Ran for 142550 frames Cell Events: 5068 mean_circ: 0.942654
Ran for 143050 frames Cell Events: 5085 mean_circ: 0.942639
Ran for 144050 frames Cell Events: 5115 mean_circ: 0.942651
Ran for 144550 frames Cell Events: 5135 mean_circ: 0.942665
Ran for 145050 frames Cell Events: 5157 mean_circ: 0.94259
Ran for 145550 frames Cell Events: 5181 mean_circ: 0.942589
Ran for 146050 frames Cell Events: 5209 mean_circ: 0.942605
Ran for 146550 frames Cell Events: 5249 mean_circ: 0.942597
Ran for 147050 frames Cell Events: 5281 mean_circ: 0.942565
Ran for 150050 frames Cell Events: 5375 mean_circ: 0.942677
Ran for 150550 frames Cell Events: 5392 mean_circ: 0.942669
Ran for 151050 frames Cell Events: 5404 mean_circ: 0.942709
Ran for 151550 frames Cell Events: 5416 mean_circ: 0.942705
Ran for 154050 frames Cell Events: 5512 mean_circ: 0.942784
Ran for 156050 frames Cell Events: 5591 mean_circ: 0.942807
Ran for 156550 frames Cell Events: 5604 mean_circ: 0.942792
Ran for 157050 frames Cell Events: 5619 mean_circ: 0.942781
Ran for 157550 frames Cell Events: 5639 mean_circ: 0.942783
Ran for 158050 frames Cell Events: 5669 mean_circ: 0.942718
Ran for 159050 frames Cell Events: 5695 mean_circ: 0.942723
Ran for 159550 frames Cell Events: 5707 mean_circ: 0.94274
Ran for 162050 frames Cell Events: 5805 mean_circ: 0.942669
Ran for 162550 frames Cell Events: 5817 mean_circ: 0.942645
Ran for 163550 frames Cell Events: 5860 mean_circ: 0.94272
Ran for 164550 frames Cell Events: 5901 mean_circ: 0.94276
Ran for 165050 frames Cell Events: 5916 mean_circ: 0.942777
Ran for 166050 frames Cell Events: 5944 mean_circ: 0.942742
Ran for 166550 frames Cell Events: 5961 mean_circ: 0.9427
Ran for 167550 frames Cell Events: 5992 mean_circ: 0.942745
Ran for 169550 frames Cell Events: 6075 mean_circ: 0.942678
Ran for 171050 frames Cell Events: 6133 mean_circ: 0.942708
Ran for 171550 frames Cell Events: 6141 mean_circ: 0.942694
Ran for 172050 frames Cell Events: 6152 mean_circ: 0.942688
Ran for 172550 frames Cell Events: 6171 mean_circ: 0.942708
Ran for 175050 frames Cell Events: 6251 mean_circ: 0.942671
Ran for 176550 frames Cell Events: 6332 mean_circ: 0.942761
Ran for 177050 frames Cell Events: 6361 mean_circ: 0.942732
Ran for 177550 frames Cell Events: 6375 mean_circ: 0.942762
Ran for 178050 frames Cell Events: 6392 mean_circ: 0.942741
Ran for 178550 frames Cell Events: 6412 mean_circ: 0.94275
Ran for 181050 frames Cell Events: 6493 mean_circ: 0.942749
Ran for 181550 frames Cell Events: 6507 mean_circ: 0.942772
Ran for 182050 frames Cell Events: 6525 mean_circ: 0.942764
Ran for 182550 frames Cell Events: 6542 mean_circ: 0.942707
Ran for 183550 frames Cell Events: 6575 mean_circ: 0.942691
Ran for 184050 frames Cell Events: 6589 mean_circ: 0.942694
Ran for 184550 frames Cell Events: 6615 mean_circ: 0.942744
Ran for 185050 frames Cell Events: 6633 mean_circ: 0.942764
Ran for 186050 frames Cell Events: 6661 mean_circ: 0.942814
Ran for 186550 frames Cell Events: 6669 mean_circ: 0.942774
Ran for 187550 frames Cell Events: 6706 mean_circ: 0.942747
Ran for 188550 frames Cell Events: 6760 mean_circ: 0.942756
Ran for 189050 frames Cell Events: 6780 mean_circ: 0.942665
Ran for 190050 frames Cell Events: 6812 mean_circ: 0.942679
Ran for 190550 frames Cell Events: 6824 mean_circ: 0.94265
Ran for 191550 frames Cell Events: 6866 mean_circ: 0.942596
Ran for 192050 frames Cell Events: 6886 mean_circ: 0.942583
Ran for 193050 frames Cell Events: 6917 mean_circ: 0.942597
Ran for 193550 frames Cell Events: 6938 mean_circ: 0.94259
Ran for 195050 frames Cell Events: 6998 mean_circ: 0.942593
Ran for 195550 frames Cell Events: 7011 mean_circ: 0.942515
Ran for 196050 frames Cell Events: 7027 mean_circ: 0.942521
Ran for 196550 frames Cell Events: 7040 mean_circ: 0.942505
Ran for 197550 frames Cell Events: 7092 mean_circ: 0.942529
Ran for 198050 frames Cell Events: 7114 mean_circ: 0.942507
Ran for 200050 frames Cell Events: 7206 mean_circ: 0.942471
Ran for 201050 frames Cell Events: 7246 mean_circ: 0.942492
Ran for 202050 frames Cell Events: 7284 mean_circ: 0.942518
Ran for 204550 frames Cell Events: 7387 mean_circ: 0.942513
Ran for 205550 frames Cell Events: 7420 mean_circ: 0.942508
Ran for 206050 frames Cell Events: 7440 mean_circ: 0.942508
Ran for 206550 frames Cell Events: 7456 mean_circ: 0.94249
Ran for 207050 frames Cell Events: 7476 mean_circ: 0.942494
Ran for 208550 frames Cell Events: 7519 mean_circ: 0.942443
Ran for 210050 frames Cell Events: 7586 mean_circ: 0.942332
Ran for 211550 frames Cell Events: 7632 mean_circ: 0.942341
Ran for 212050 frames Cell Events: 7644 mean_circ: 0.942345
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Ran for 216050 frames Cell Events: 7786 mean_circ: 0.942321
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Ran for 219050 frames Cell Events: 7876 mean_circ: 0.942273
Ran for 219550 frames Cell Events: 7888 mean_circ: 0.94227
Ran for 220050 frames Cell Events: 7903 mean_circ: 0.942255
Ran for 220550 frames Cell Events: 7925 mean_circ: 0.942202
Ran for 221550 frames Cell Events: 7974 mean_circ: 0.942219
Ran for 223550 frames Cell Events: 8058 mean_circ: 0.942145
Ran for 224050 frames Cell Events: 8075 mean_circ: 0.942162
Ran for 225550 frames Cell Events: 8125 mean_circ: 0.94219
Ran for 226050 frames Cell Events: 8139 mean_circ: 0.942196
Ran for 226550 frames Cell Events: 8155 mean_circ: 0.942202
Ran for 227550 frames Cell Events: 8228 mean_circ: 0.942121
Ran for 228050 frames Cell Events: 8245 mean_circ: 0.942131
Ran for 228550 frames Cell Events: 8263 mean_circ: 0.942146
Ran for 229550 frames Cell Events: 8302 mean_circ: 0.94215
Ran for 231050 frames Cell Events: 8364 mean_circ: 0.942032
Ran for 231550 frames Cell Events: 8389 mean_circ: 0.942017
Ran for 232550 frames Cell Events: 8419 mean_circ: 0.942004
Ran for 234050 frames Cell Events: 8463 mean_circ: 0.941987
Ran for 235050 frames Cell Events: 8502 mean_circ: 0.941995
Ran for 236050 frames Cell Events: 8535 mean_circ: 0.942033
Ran for 237550 frames Cell Events: 8589 mean_circ: 0.942124
Ran for 240050 frames Cell Events: 8699 mean_circ: 0.942111
Ran for 241550 frames Cell Events: 8760 mean_circ: 0.942072
Ran for 242050 frames Cell Events: 8785 mean_circ: 0.942088
Ran for 242550 frames Cell Events: 8806 mean_circ: 0.942109
Ran for 244050 frames Cell Events: 8849 mean_circ: 0.942102
Ran for 246550 frames Cell Events: 8974 mean_circ: 0.942047
Ran for 247050 frames Cell Events: 8988 mean_circ: 0.942061
Ran for 248050 frames Cell Events: 9020 mean_circ: 0.942066
Ran for 248550 frames Cell Events: 9040 mean_circ: 0.942091
Ran for 249050 frames Cell Events: 9058 mean_circ: 0.942118
Ran for 249550 frames Cell Events: 9083 mean_circ: 0.942113
Ran for 250050 frames Cell Events: 9097 mean_circ: 0.942157
Ran for 251550 frames Cell Events: 9154 mean_circ: 0.942191
Ran for 253050 frames Cell Events: 9200 mean_circ: 0.942181
Ran for 253550 frames Cell Events: 9214 mean_circ: 0.942194
Ran for 254550 frames Cell Events: 9253 mean_circ: 0.942209
Ran for 255050 frames Cell Events: 9271 mean_circ: 0.942241
Ran for 255550 frames Cell Events: 9303 mean_circ: 0.942268
Ran for 256050 frames Cell Events: 9315 mean_circ: 0.942286
Ran for 258050 frames Cell Events: 9391 mean_circ: 0.94229
Ran for 258550 frames Cell Events: 9408 mean_circ: 0.942301
Ran for 259550 frames Cell Events: 9445 mean_circ: 0.942322
Ran for 261050 frames Cell Events: 9513 mean_circ: 0.942367
Ran for 261550 frames Cell Events: 9530 mean_circ: 0.942363
Ran for 263050 frames Cell Events: 9583 mean_circ: 0.942353
Ran for 263550 frames Cell Events: 9598 mean_circ: 0.942366
Ran for 264050 frames Cell Events: 9621 mean_circ: 0.942384
Ran for 264550 frames Cell Events: 9644 mean_circ: 0.942378
Ran for 265550 frames Cell Events: 9683 mean_circ: 0.942381
Ran for 267050 frames Cell Events: 9738 mean_circ: 0.942408
Ran for 267550 frames Cell Events: 9754 mean_circ: 0.942398
Ran for 268050 frames Cell Events: 9770 mean_circ: 0.942393
Ran for 268550 frames Cell Events: 9783 mean_circ: 0.942401
Ran for 270050 frames Cell Events: 9852 mean_circ: 0.942412
Ran for 270550 frames Cell Events: 9864 mean_circ: 0.942405
Ran for 271050 frames Cell Events: 9880 mean_circ: 0.942388
Ran for 272050 frames Cell Events: 9921 mean_circ: 0.942424
Ran for 272550 frames Cell Events: 9932 mean_circ: 0.942438
Ran for 273550 frames Cell Events: 9967 mean_circ: 0.942451



End this measurment.
because stop condition (time/nr of cells) was met

Stopping time: 1.76569e+009
****************************************
Measurement finished

Mean Circularitiy: 0.942475
Mean Area: 642.703
Mean FL-1 intensity: 3394.24
Mean FL-2 intensity: 4398.62
Mean FL-3 intensity: 0

frames processed: 272678
Total Time: 137390ms
Number of Runs (new bg img) 0
Frames collected: 274655
Skipped frames: 135782
Rescued Frames: 4740382
Samples DAQ: 68664522
Samples written: 137327688
Samples per Channel: 68663844
FPS: 1999.09

Samples per second: 499773
Expected samples/s: 500000

Events: 10001
Events per second: 72.7928
jumped back (PMT): 4175
#Frames read, frequency
# 0 frames :419924
# 1 frames :109500
# 2 frames :4319
# 3 frames :2224
# 4 frames :1162
# 5 frames :853
# 6 frames :866
# 7 frames :1600
# 8 frames :1316
# 9 frames :1028
# 10 frames :1032
# 11 frames :833
# 12 frames :675
# 13 frames :479
# 14 frames :340
# 15 frames :336
# 16 frames :306
# 17 frames :243
# 18 frames :251
# 19 frames :242
# 20 frames :217
# 21 frames :201
# 22 frames :207
# 23 frames :150
# 24 frames :95
# 25 frames :97
# 26 frames :62
# 27 frames :63
# 28 frames :62
# 29 frames :55
# 30 frames :44
# 31 frames :32
# 32 frames :40
# 33 frames :30
# 34 frames :25
# 35 frames :12
# 36 frames :33
# 37 frames :24
# 38 frames :16
# 39 frames :14
# 40 frames :21
# 41 frames :15
# 42 frames :10
# 43 frames :7
# 44 frames :7
# 45 frames :9
# 46 frames :7
# 47 frames :5
# 48 frames :5
# 49 frames :6
# 50 frames :1
# 51 frames :4
# 52 frames :5
# 53 frames :4
# 55 frames :2
# 56 frames :4
# 57 frames :1
# 58 frames :2
# 59 frames :2
# 60 frames :1
# 63 frames :2
# 66 frames :2
# 67 frames :1
# 69 frames :2
# 70 frames :1
# 83 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.1966
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0