Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_12.59.59 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "9cf99c45a8d6f4ee7ebe18021b660573",
"name": "M1_20170604_2018_dsRNA_G5_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "11:00:21"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 9039 (max 9040) in '9039'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.3037
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.77091e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 20 mean_circ: 0.938623
Ran for 2050 frames Cell Events: 47 mean_circ: 0.936317
Ran for 3050 frames Cell Events: 74 mean_circ: 0.93393
Ran for 3550 frames Cell Events: 85 mean_circ: 0.934299
Ran for 4050 frames Cell Events: 97 mean_circ: 0.935099
Ran for 4550 frames Cell Events: 113 mean_circ: 0.933416
Ran for 5050 frames Cell Events: 126 mean_circ: 0.935629
Ran for 5550 frames Cell Events: 143 mean_circ: 0.938903
Ran for 6050 frames Cell Events: 154 mean_circ: 0.937532
Ran for 7050 frames Cell Events: 185 mean_circ: 0.939049
Ran for 7550 frames Cell Events: 197 mean_circ: 0.939654
Ran for 9050 frames Cell Events: 232 mean_circ: 0.940889
Ran for 9550 frames Cell Events: 245 mean_circ: 0.938433
Ran for 10050 frames Cell Events: 259 mean_circ: 0.938534
Ran for 10550 frames Cell Events: 270 mean_circ: 0.938653
Ran for 11050 frames Cell Events: 278 mean_circ: 0.938138
Ran for 12050 frames Cell Events: 299 mean_circ: 0.936641
Ran for 13550 frames Cell Events: 347 mean_circ: 0.937459
Ran for 14050 frames Cell Events: 353 mean_circ: 0.937926
Ran for 14550 frames Cell Events: 367 mean_circ: 0.937884
Ran for 15550 frames Cell Events: 403 mean_circ: 0.938521
Ran for 16550 frames Cell Events: 434 mean_circ: 0.93837
Ran for 18550 frames Cell Events: 501 mean_circ: 0.938056
Ran for 19050 frames Cell Events: 528 mean_circ: 0.937891
Ran for 19550 frames Cell Events: 544 mean_circ: 0.93825
Ran for 20050 frames Cell Events: 563 mean_circ: 0.937817
Ran for 20550 frames Cell Events: 597 mean_circ: 0.937933
Ran for 22050 frames Cell Events: 628 mean_circ: 0.938468
Ran for 22550 frames Cell Events: 649 mean_circ: 0.939128
Ran for 23050 frames Cell Events: 668 mean_circ: 0.938841
Ran for 23550 frames Cell Events: 691 mean_circ: 0.938051
Ran for 24550 frames Cell Events: 727 mean_circ: 0.937253
Ran for 25550 frames Cell Events: 753 mean_circ: 0.936895
Ran for 26050 frames Cell Events: 759 mean_circ: 0.936984
Ran for 28050 frames Cell Events: 822 mean_circ: 0.936671
Ran for 28550 frames Cell Events: 835 mean_circ: 0.936596
Ran for 29050 frames Cell Events: 846 mean_circ: 0.936807
Ran for 30050 frames Cell Events: 886 mean_circ: 0.93703
Ran for 30550 frames Cell Events: 899 mean_circ: 0.936758
Ran for 31550 frames Cell Events: 923 mean_circ: 0.936406
Ran for 32550 frames Cell Events: 955 mean_circ: 0.936722
Ran for 33550 frames Cell Events: 981 mean_circ: 0.937057
Ran for 34050 frames Cell Events: 993 mean_circ: 0.937276
Ran for 34550 frames Cell Events: 1002 mean_circ: 0.937342
Ran for 36050 frames Cell Events: 1024 mean_circ: 0.937256
Ran for 36550 frames Cell Events: 1046 mean_circ: 0.937144
Ran for 37050 frames Cell Events: 1057 mean_circ: 0.93717
Ran for 37550 frames Cell Events: 1071 mean_circ: 0.937029
Ran for 38550 frames Cell Events: 1096 mean_circ: 0.937146
Ran for 39550 frames Cell Events: 1121 mean_circ: 0.936846
Ran for 40050 frames Cell Events: 1129 mean_circ: 0.936447
Ran for 40550 frames Cell Events: 1145 mean_circ: 0.936367
Ran for 41550 frames Cell Events: 1179 mean_circ: 0.936071
Ran for 42050 frames Cell Events: 1196 mean_circ: 0.936134
Ran for 42550 frames Cell Events: 1207 mean_circ: 0.936108
Ran for 43050 frames Cell Events: 1219 mean_circ: 0.936075
Ran for 43550 frames Cell Events: 1228 mean_circ: 0.93612
Ran for 44050 frames Cell Events: 1237 mean_circ: 0.936168
Ran for 44550 frames Cell Events: 1254 mean_circ: 0.936266
Ran for 45050 frames Cell Events: 1274 mean_circ: 0.936354
Ran for 45550 frames Cell Events: 1285 mean_circ: 0.936327
Ran for 46050 frames Cell Events: 1306 mean_circ: 0.936496
Ran for 46550 frames Cell Events: 1315 mean_circ: 0.936329
Ran for 47050 frames Cell Events: 1338 mean_circ: 0.936256
Ran for 48050 frames Cell Events: 1369 mean_circ: 0.935994
Ran for 48550 frames Cell Events: 1389 mean_circ: 0.935749
Ran for 50050 frames Cell Events: 1436 mean_circ: 0.935353
Ran for 50550 frames Cell Events: 1462 mean_circ: 0.935217
Ran for 51050 frames Cell Events: 1471 mean_circ: 0.935248
Ran for 52550 frames Cell Events: 1528 mean_circ: 0.93493
Ran for 54050 frames Cell Events: 1573 mean_circ: 0.935169
Ran for 54550 frames Cell Events: 1591 mean_circ: 0.935467
Ran for 55050 frames Cell Events: 1610 mean_circ: 0.935609
Ran for 56050 frames Cell Events: 1655 mean_circ: 0.935346
Ran for 56550 frames Cell Events: 1674 mean_circ: 0.935186
Ran for 57050 frames Cell Events: 1686 mean_circ: 0.93539
Ran for 58550 frames Cell Events: 1723 mean_circ: 0.935628
Ran for 59050 frames Cell Events: 1739 mean_circ: 0.935706
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Ran for 60550 frames Cell Events: 1777 mean_circ: 0.935913
Ran for 62050 frames Cell Events: 1834 mean_circ: 0.935969
Ran for 62550 frames Cell Events: 1841 mean_circ: 0.936119
Ran for 63550 frames Cell Events: 1864 mean_circ: 0.936098
Ran for 64550 frames Cell Events: 1899 mean_circ: 0.935675
Ran for 65550 frames Cell Events: 1926 mean_circ: 0.935724
Ran for 66050 frames Cell Events: 1935 mean_circ: 0.935577
Ran for 67050 frames Cell Events: 1967 mean_circ: 0.935602
Ran for 67550 frames Cell Events: 1982 mean_circ: 0.935536
Ran for 68550 frames Cell Events: 2017 mean_circ: 0.935185
Ran for 69050 frames Cell Events: 2029 mean_circ: 0.935284
Ran for 69550 frames Cell Events: 2051 mean_circ: 0.935151
Ran for 71050 frames Cell Events: 2109 mean_circ: 0.935277
Ran for 71550 frames Cell Events: 2145 mean_circ: 0.935414
Ran for 72550 frames Cell Events: 2195 mean_circ: 0.935453
Ran for 73050 frames Cell Events: 2222 mean_circ: 0.935389
Ran for 73550 frames Cell Events: 2254 mean_circ: 0.935395
Ran for 74550 frames Cell Events: 2287 mean_circ: 0.935452
Ran for 75050 frames Cell Events: 2297 mean_circ: 0.935484
Ran for 75550 frames Cell Events: 2308 mean_circ: 0.935565
Ran for 77550 frames Cell Events: 2359 mean_circ: 0.935574
Ran for 78050 frames Cell Events: 2373 mean_circ: 0.935529
Ran for 79550 frames Cell Events: 2399 mean_circ: 0.935495
Ran for 80550 frames Cell Events: 2422 mean_circ: 0.935593
Ran for 81550 frames Cell Events: 2462 mean_circ: 0.935559
Ran for 82050 frames Cell Events: 2480 mean_circ: 0.935608
Ran for 82550 frames Cell Events: 2503 mean_circ: 0.935774
Ran for 83050 frames Cell Events: 2517 mean_circ: 0.935855
Ran for 83550 frames Cell Events: 2525 mean_circ: 0.935798
Ran for 84050 frames Cell Events: 2548 mean_circ: 0.935683
Ran for 84550 frames Cell Events: 2565 mean_circ: 0.935789
Ran for 87050 frames Cell Events: 2655 mean_circ: 0.935776
Ran for 87550 frames Cell Events: 2671 mean_circ: 0.935794
Ran for 88050 frames Cell Events: 2688 mean_circ: 0.935816
Ran for 88550 frames Cell Events: 2708 mean_circ: 0.935852
Ran for 89050 frames Cell Events: 2729 mean_circ: 0.935791
Ran for 89550 frames Cell Events: 2752 mean_circ: 0.935922
Ran for 90050 frames Cell Events: 2771 mean_circ: 0.936012
Ran for 90550 frames Cell Events: 2786 mean_circ: 0.935975
Ran for 91050 frames Cell Events: 2803 mean_circ: 0.936024
Ran for 91550 frames Cell Events: 2821 mean_circ: 0.936031
Ran for 92550 frames Cell Events: 2846 mean_circ: 0.935982
Ran for 93050 frames Cell Events: 2860 mean_circ: 0.936004
Ran for 94550 frames Cell Events: 2908 mean_circ: 0.936102
Ran for 95050 frames Cell Events: 2918 mean_circ: 0.936121
Ran for 95550 frames Cell Events: 2929 mean_circ: 0.936028
Ran for 96050 frames Cell Events: 2945 mean_circ: 0.935993
Ran for 97050 frames Cell Events: 2980 mean_circ: 0.936124
Ran for 97550 frames Cell Events: 2998 mean_circ: 0.936137
Ran for 98550 frames Cell Events: 3024 mean_circ: 0.936076
Ran for 99550 frames Cell Events: 3045 mean_circ: 0.936136
Ran for 100550 frames Cell Events: 3078 mean_circ: 0.936198
Ran for 101050 frames Cell Events: 3094 mean_circ: 0.936136
Ran for 101550 frames Cell Events: 3109 mean_circ: 0.936123
Ran for 102050 frames Cell Events: 3123 mean_circ: 0.936145
Ran for 103050 frames Cell Events: 3151 mean_circ: 0.935961
Ran for 105550 frames Cell Events: 3229 mean_circ: 0.936038
Ran for 106550 frames Cell Events: 3263 mean_circ: 0.936038
Ran for 107050 frames Cell Events: 3279 mean_circ: 0.936033
Ran for 108050 frames Cell Events: 3316 mean_circ: 0.935884
Ran for 108550 frames Cell Events: 3338 mean_circ: 0.935959
Ran for 110550 frames Cell Events: 3388 mean_circ: 0.935968
Ran for 111550 frames Cell Events: 3415 mean_circ: 0.935806
Ran for 112550 frames Cell Events: 3453 mean_circ: 0.935856
Ran for 113050 frames Cell Events: 3475 mean_circ: 0.935863
Ran for 113550 frames Cell Events: 3490 mean_circ: 0.93588
Ran for 114550 frames Cell Events: 3512 mean_circ: 0.935859
Ran for 115050 frames Cell Events: 3523 mean_circ: 0.935834
Ran for 115550 frames Cell Events: 3538 mean_circ: 0.93577
Ran for 117550 frames Cell Events: 3590 mean_circ: 0.935824
Ran for 119050 frames Cell Events: 3634 mean_circ: 0.935864
Ran for 119550 frames Cell Events: 3646 mean_circ: 0.935877
Ran for 120050 frames Cell Events: 3660 mean_circ: 0.935925
Ran for 120550 frames Cell Events: 3676 mean_circ: 0.935919
Ran for 121050 frames Cell Events: 3686 mean_circ: 0.935902
Ran for 121550 frames Cell Events: 3697 mean_circ: 0.935931
Ran for 122050 frames Cell Events: 3709 mean_circ: 0.935916
Ran for 122550 frames Cell Events: 3730 mean_circ: 0.935898
Ran for 123050 frames Cell Events: 3747 mean_circ: 0.935946
Ran for 123550 frames Cell Events: 3759 mean_circ: 0.935893
Ran for 125050 frames Cell Events: 3818 mean_circ: 0.935749
Ran for 126050 frames Cell Events: 3848 mean_circ: 0.935688
Ran for 126550 frames Cell Events: 3858 mean_circ: 0.935682
Ran for 127550 frames Cell Events: 3889 mean_circ: 0.935599
Ran for 128550 frames Cell Events: 3917 mean_circ: 0.935533
Ran for 129050 frames Cell Events: 3933 mean_circ: 0.935481
Ran for 129550 frames Cell Events: 3945 mean_circ: 0.935475
Ran for 130050 frames Cell Events: 3959 mean_circ: 0.935479
Ran for 130550 frames Cell Events: 3976 mean_circ: 0.935501
Ran for 131050 frames Cell Events: 4001 mean_circ: 0.935532
Ran for 131550 frames Cell Events: 4021 mean_circ: 0.935474
Ran for 132050 frames Cell Events: 4031 mean_circ: 0.935501
Ran for 132550 frames Cell Events: 4051 mean_circ: 0.935493
Ran for 133050 frames Cell Events: 4074 mean_circ: 0.935553
Ran for 133550 frames Cell Events: 4097 mean_circ: 0.935541
Ran for 134550 frames Cell Events: 4132 mean_circ: 0.935659
Ran for 135550 frames Cell Events: 4169 mean_circ: 0.935722
Ran for 136550 frames Cell Events: 4196 mean_circ: 0.935696
Ran for 137050 frames Cell Events: 4212 mean_circ: 0.935641
Ran for 137550 frames Cell Events: 4233 mean_circ: 0.935673
Ran for 139050 frames Cell Events: 4298 mean_circ: 0.935756
Ran for 139550 frames Cell Events: 4320 mean_circ: 0.935785
Ran for 140050 frames Cell Events: 4333 mean_circ: 0.935784
Ran for 140550 frames Cell Events: 4354 mean_circ: 0.935779
Ran for 141050 frames Cell Events: 4378 mean_circ: 0.935772
Ran for 141550 frames Cell Events: 4400 mean_circ: 0.935857
Ran for 142050 frames Cell Events: 4410 mean_circ: 0.93593
Ran for 144050 frames Cell Events: 4487 mean_circ: 0.935906
Ran for 144550 frames Cell Events: 4500 mean_circ: 0.935887
Ran for 145050 frames Cell Events: 4522 mean_circ: 0.935859
Ran for 146050 frames Cell Events: 4547 mean_circ: 0.935922
Ran for 147050 frames Cell Events: 4591 mean_circ: 0.935983
Ran for 148050 frames Cell Events: 4624 mean_circ: 0.93598
Ran for 148550 frames Cell Events: 4650 mean_circ: 0.936003
Ran for 149550 frames Cell Events: 4683 mean_circ: 0.936027
Ran for 150050 frames Cell Events: 4697 mean_circ: 0.935965
Ran for 150550 frames Cell Events: 4712 mean_circ: 0.935925
Ran for 151050 frames Cell Events: 4728 mean_circ: 0.935944
Ran for 151550 frames Cell Events: 4739 mean_circ: 0.935945
Ran for 152050 frames Cell Events: 4758 mean_circ: 0.935923
Ran for 152550 frames Cell Events: 4771 mean_circ: 0.935894
Ran for 154550 frames Cell Events: 4854 mean_circ: 0.936017
Ran for 155050 frames Cell Events: 4870 mean_circ: 0.935967
Ran for 156550 frames Cell Events: 4922 mean_circ: 0.936014
Ran for 157050 frames Cell Events: 4937 mean_circ: 0.936003
Ran for 157550 frames Cell Events: 4956 mean_circ: 0.936064
Ran for 158050 frames Cell Events: 4977 mean_circ: 0.936064
Ran for 158550 frames Cell Events: 5006 mean_circ: 0.936075
Ran for 159550 frames Cell Events: 5033 mean_circ: 0.936099
Ran for 161050 frames Cell Events: 5091 mean_circ: 0.936001
Ran for 162550 frames Cell Events: 5150 mean_circ: 0.936151
Ran for 164050 frames Cell Events: 5222 mean_circ: 0.936181
Ran for 164550 frames Cell Events: 5245 mean_circ: 0.936238
Ran for 165050 frames Cell Events: 5266 mean_circ: 0.936268
Ran for 167050 frames Cell Events: 5323 mean_circ: 0.936344
Ran for 169050 frames Cell Events: 5404 mean_circ: 0.936415
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Ran for 170050 frames Cell Events: 5447 mean_circ: 0.936438
Ran for 171550 frames Cell Events: 5513 mean_circ: 0.936487
Ran for 172050 frames Cell Events: 5526 mean_circ: 0.936512
Ran for 173050 frames Cell Events: 5557 mean_circ: 0.936454
Ran for 173550 frames Cell Events: 5576 mean_circ: 0.93641
Ran for 174050 frames Cell Events: 5594 mean_circ: 0.93638
Ran for 174550 frames Cell Events: 5613 mean_circ: 0.936384
Ran for 175050 frames Cell Events: 5621 mean_circ: 0.936322
Ran for 175550 frames Cell Events: 5644 mean_circ: 0.936353
Ran for 176050 frames Cell Events: 5665 mean_circ: 0.936388
Ran for 176550 frames Cell Events: 5683 mean_circ: 0.936397
Ran for 177050 frames Cell Events: 5704 mean_circ: 0.936331
Ran for 177550 frames Cell Events: 5721 mean_circ: 0.936363
Ran for 178050 frames Cell Events: 5738 mean_circ: 0.936355
Ran for 180050 frames Cell Events: 5817 mean_circ: 0.936384
Ran for 181050 frames Cell Events: 5846 mean_circ: 0.936384
Ran for 182050 frames Cell Events: 5884 mean_circ: 0.936427
Ran for 183550 frames Cell Events: 5944 mean_circ: 0.936403
Ran for 184050 frames Cell Events: 5957 mean_circ: 0.93644
Ran for 184550 frames Cell Events: 5977 mean_circ: 0.936432
Ran for 185550 frames Cell Events: 6018 mean_circ: 0.936441
Ran for 186050 frames Cell Events: 6034 mean_circ: 0.936388
Ran for 186550 frames Cell Events: 6054 mean_circ: 0.936365
Ran for 187550 frames Cell Events: 6083 mean_circ: 0.936405
Ran for 188550 frames Cell Events: 6111 mean_circ: 0.936437
Ran for 189550 frames Cell Events: 6146 mean_circ: 0.936458
Ran for 190550 frames Cell Events: 6178 mean_circ: 0.936506
Ran for 191050 frames Cell Events: 6193 mean_circ: 0.936471
Ran for 191550 frames Cell Events: 6218 mean_circ: 0.936497
Ran for 192050 frames Cell Events: 6235 mean_circ: 0.936422
Ran for 193550 frames Cell Events: 6282 mean_circ: 0.936374
Ran for 194050 frames Cell Events: 6294 mean_circ: 0.936344
Ran for 194550 frames Cell Events: 6309 mean_circ: 0.93637
Ran for 195050 frames Cell Events: 6322 mean_circ: 0.936394
Ran for 196050 frames Cell Events: 6371 mean_circ: 0.936425
Ran for 196550 frames Cell Events: 6390 mean_circ: 0.936462
Ran for 197050 frames Cell Events: 6403 mean_circ: 0.936493
Ran for 198050 frames Cell Events: 6435 mean_circ: 0.93648
Ran for 198550 frames Cell Events: 6450 mean_circ: 0.936484
Ran for 199050 frames Cell Events: 6461 mean_circ: 0.936488
Ran for 199550 frames Cell Events: 6479 mean_circ: 0.936499
Ran for 200550 frames Cell Events: 6510 mean_circ: 0.936536
Ran for 201050 frames Cell Events: 6532 mean_circ: 0.936502
Ran for 201550 frames Cell Events: 6543 mean_circ: 0.936466
Ran for 202050 frames Cell Events: 6555 mean_circ: 0.936418
Ran for 203050 frames Cell Events: 6593 mean_circ: 0.936418
Ran for 205550 frames Cell Events: 6705 mean_circ: 0.936387
Ran for 206050 frames Cell Events: 6722 mean_circ: 0.936378
Ran for 206550 frames Cell Events: 6737 mean_circ: 0.936353
Ran for 207050 frames Cell Events: 6754 mean_circ: 0.936392
Ran for 209050 frames Cell Events: 6827 mean_circ: 0.936367
Ran for 209550 frames Cell Events: 6842 mean_circ: 0.936336
Ran for 211050 frames Cell Events: 6907 mean_circ: 0.936279
Ran for 212050 frames Cell Events: 6945 mean_circ: 0.936352
Ran for 213050 frames Cell Events: 6988 mean_circ: 0.93625
Ran for 214050 frames Cell Events: 7024 mean_circ: 0.936288
Ran for 215050 frames Cell Events: 7054 mean_circ: 0.936242
Ran for 215550 frames Cell Events: 7070 mean_circ: 0.936218
Ran for 216050 frames Cell Events: 7088 mean_circ: 0.936172
Ran for 216550 frames Cell Events: 7103 mean_circ: 0.936149
Ran for 217050 frames Cell Events: 7118 mean_circ: 0.936137
Ran for 217550 frames Cell Events: 7138 mean_circ: 0.936119
Ran for 218050 frames Cell Events: 7161 mean_circ: 0.936082
Ran for 218550 frames Cell Events: 7182 mean_circ: 0.936075
Ran for 219050 frames Cell Events: 7201 mean_circ: 0.936097
Ran for 222050 frames Cell Events: 7341 mean_circ: 0.936024
Ran for 223550 frames Cell Events: 7397 mean_circ: 0.936059
Ran for 224550 frames Cell Events: 7431 mean_circ: 0.93604
Ran for 225050 frames Cell Events: 7447 mean_circ: 0.935978
Ran for 226550 frames Cell Events: 7535 mean_circ: 0.936007
Ran for 227050 frames Cell Events: 7561 mean_circ: 0.936014
Ran for 228550 frames Cell Events: 7615 mean_circ: 0.935939
Ran for 229550 frames Cell Events: 7646 mean_circ: 0.935949
Ran for 230050 frames Cell Events: 7664 mean_circ: 0.935966
Ran for 230550 frames Cell Events: 7684 mean_circ: 0.935882
Ran for 231050 frames Cell Events: 7708 mean_circ: 0.935894
Ran for 231550 frames Cell Events: 7727 mean_circ: 0.935894
Ran for 232050 frames Cell Events: 7739 mean_circ: 0.935855
Ran for 232550 frames Cell Events: 7758 mean_circ: 0.935844
Ran for 233550 frames Cell Events: 7790 mean_circ: 0.935782
Ran for 234050 frames Cell Events: 7802 mean_circ: 0.935802
Ran for 234550 frames Cell Events: 7824 mean_circ: 0.935824
Ran for 235050 frames Cell Events: 7833 mean_circ: 0.935826
Ran for 235550 frames Cell Events: 7848 mean_circ: 0.935826
Ran for 236050 frames Cell Events: 7860 mean_circ: 0.935851
Ran for 236550 frames Cell Events: 7889 mean_circ: 0.935869
Ran for 237050 frames Cell Events: 7911 mean_circ: 0.935877
Ran for 238050 frames Cell Events: 7941 mean_circ: 0.935909
Ran for 239050 frames Cell Events: 7977 mean_circ: 0.935984
Ran for 239550 frames Cell Events: 7992 mean_circ: 0.935989
Ran for 241050 frames Cell Events: 8043 mean_circ: 0.936056
Ran for 241550 frames Cell Events: 8058 mean_circ: 0.936102
Ran for 242550 frames Cell Events: 8103 mean_circ: 0.936087
Ran for 243050 frames Cell Events: 8123 mean_circ: 0.936088
Ran for 243550 frames Cell Events: 8137 mean_circ: 0.936077
Ran for 244050 frames Cell Events: 8153 mean_circ: 0.936089
Ran for 245550 frames Cell Events: 8207 mean_circ: 0.936124
Ran for 247550 frames Cell Events: 8260 mean_circ: 0.936173
Ran for 248050 frames Cell Events: 8274 mean_circ: 0.936212
Ran for 248550 frames Cell Events: 8294 mean_circ: 0.936194
Ran for 249050 frames Cell Events: 8308 mean_circ: 0.936213
Ran for 250550 frames Cell Events: 8364 mean_circ: 0.936195
Ran for 251050 frames Cell Events: 8379 mean_circ: 0.936228
Ran for 251550 frames Cell Events: 8393 mean_circ: 0.936189
Ran for 252550 frames Cell Events: 8422 mean_circ: 0.936173
Ran for 254050 frames Cell Events: 8495 mean_circ: 0.936084
Ran for 254550 frames Cell Events: 8518 mean_circ: 0.936066
Ran for 255050 frames Cell Events: 8539 mean_circ: 0.936099
Ran for 255550 frames Cell Events: 8555 mean_circ: 0.936088
Ran for 256050 frames Cell Events: 8570 mean_circ: 0.936087
Ran for 256550 frames Cell Events: 8590 mean_circ: 0.936075
Ran for 257550 frames Cell Events: 8625 mean_circ: 0.936088
Ran for 258050 frames Cell Events: 8650 mean_circ: 0.936073
Ran for 259050 frames Cell Events: 8699 mean_circ: 0.936135
Ran for 259550 frames Cell Events: 8719 mean_circ: 0.936127
Ran for 260050 frames Cell Events: 8736 mean_circ: 0.936133
Ran for 261550 frames Cell Events: 8788 mean_circ: 0.936232
Ran for 262050 frames Cell Events: 8806 mean_circ: 0.936207
Ran for 262550 frames Cell Events: 8821 mean_circ: 0.936222
Ran for 263050 frames Cell Events: 8840 mean_circ: 0.936183
Ran for 263550 frames Cell Events: 8866 mean_circ: 0.936193
Ran for 264050 frames Cell Events: 8878 mean_circ: 0.93623
Ran for 265550 frames Cell Events: 8928 mean_circ: 0.936287
Ran for 266550 frames Cell Events: 8967 mean_circ: 0.936282
Ran for 267550 frames Cell Events: 8999 mean_circ: 0.936317
Ran for 268050 frames Cell Events: 9020 mean_circ: 0.936319



End this measurment..



Stopping time: 1.77105e+009
****************************************
Measurement finished

Mean Circularitiy: 0.936299
Mean Area: 661.811
Mean FL-1 intensity: 3392.32
Mean FL-2 intensity: 4446.69
Mean FL-3 intensity: 0

frames processed: 264573
Total Time: 134351ms
Number of Runs (new bg img) 0
Frames collected: 268570
Skipped frames: 172579
Rescued Frames: 6164022
Samples DAQ: 67145975
Samples written: 134285164
Samples per Channel: 67142582
FPS: 1999.02

Samples per second: 499756
Expected samples/s: 500000

Events: 9040
Events per second: 67.2866
jumped back (PMT): 4728
#Frames read, frequency
# 0 frames :391853
# 1 frames :125837
# 2 frames :4816
# 3 frames :2094
# 4 frames :1305
# 5 frames :731
# 6 frames :1029
# 7 frames :2008
# 8 frames :1622
# 9 frames :1134
# 10 frames :736
# 11 frames :597
# 12 frames :461
# 13 frames :428
# 14 frames :324
# 15 frames :334
# 16 frames :302
# 17 frames :256
# 18 frames :178
# 19 frames :143
# 20 frames :113
# 21 frames :95
# 22 frames :91
# 23 frames :74
# 24 frames :56
# 25 frames :53
# 26 frames :52
# 27 frames :36
# 28 frames :30
# 29 frames :20
# 30 frames :21
# 31 frames :17
# 32 frames :16
# 33 frames :17
# 34 frames :19
# 35 frames :14
# 36 frames :11
# 37 frames :13
# 38 frames :11
# 39 frames :4
# 40 frames :4
# 41 frames :9
# 42 frames :2
# 43 frames :3
# 44 frames :3
# 45 frames :3
# 46 frames :6
# 47 frames :2
# 48 frames :2
# 49 frames :3
# 50 frames :1
# 51 frames :1
# 52 frames :1
# 54 frames :1
# 56 frames :2
# 57 frames :1
# 62 frames :2
# 63 frames :1
# 70 frames :1
# 79 frames :1
# 83 frames :1
# 86 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.3037
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0