Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_13.02.45 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "9ff5297e0164d93d4f37be3beeb85867",
"name": "M1_20170604_2053_dsRNA_H3_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "11:03:09"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10000 (max 10001) in
'10000'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.3361
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.77301e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 19 mean_circ: 0.964588
Ran for 1050 frames Cell Events: 33 mean_circ: 0.952282
Ran for 1550 frames Cell Events: 49 mean_circ: 0.952702
Ran for 2050 frames Cell Events: 63 mean_circ: 0.951422
Ran for 2550 frames Cell Events: 89 mean_circ: 0.953316
Ran for 3550 frames Cell Events: 132 mean_circ: 0.95229
Ran for 4050 frames Cell Events: 141 mean_circ: 0.952639
Ran for 4550 frames Cell Events: 154 mean_circ: 0.952566
Ran for 6050 frames Cell Events: 220 mean_circ: 0.953469
Ran for 6550 frames Cell Events: 233 mean_circ: 0.953749
Ran for 7550 frames Cell Events: 262 mean_circ: 0.953069
Ran for 9050 frames Cell Events: 319 mean_circ: 0.950717
Ran for 9550 frames Cell Events: 334 mean_circ: 0.95024
Ran for 11050 frames Cell Events: 390 mean_circ: 0.948962
Ran for 11550 frames Cell Events: 410 mean_circ: 0.949421
Ran for 13050 frames Cell Events: 477 mean_circ: 0.948594
Ran for 13550 frames Cell Events: 492 mean_circ: 0.948136
Ran for 14050 frames Cell Events: 509 mean_circ: 0.948647
Ran for 14550 frames Cell Events: 527 mean_circ: 0.948573
Ran for 15050 frames Cell Events: 541 mean_circ: 0.948284
Ran for 15550 frames Cell Events: 557 mean_circ: 0.948403
Ran for 16050 frames Cell Events: 574 mean_circ: 0.948076
Ran for 16550 frames Cell Events: 590 mean_circ: 0.948001
Ran for 17050 frames Cell Events: 608 mean_circ: 0.948117
Ran for 18050 frames Cell Events: 639 mean_circ: 0.948364
Ran for 18550 frames Cell Events: 652 mean_circ: 0.948503
Ran for 19050 frames Cell Events: 674 mean_circ: 0.948485
Ran for 20050 frames Cell Events: 730 mean_circ: 0.948699
Ran for 20550 frames Cell Events: 743 mean_circ: 0.94855
Ran for 21050 frames Cell Events: 781 mean_circ: 0.948688
Ran for 21550 frames Cell Events: 795 mean_circ: 0.948877
Ran for 22050 frames Cell Events: 818 mean_circ: 0.949088
Ran for 22550 frames Cell Events: 832 mean_circ: 0.948873
Ran for 23550 frames Cell Events: 862 mean_circ: 0.949041
Ran for 24550 frames Cell Events: 906 mean_circ: 0.949047
Ran for 25550 frames Cell Events: 937 mean_circ: 0.949028
Ran for 26050 frames Cell Events: 963 mean_circ: 0.94914
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Ran for 27050 frames Cell Events: 1003 mean_circ: 0.949065
Ran for 28550 frames Cell Events: 1064 mean_circ: 0.949181
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Ran for 30550 frames Cell Events: 1144 mean_circ: 0.948634
Ran for 31050 frames Cell Events: 1162 mean_circ: 0.948699
Ran for 31550 frames Cell Events: 1187 mean_circ: 0.948785
Ran for 32050 frames Cell Events: 1203 mean_circ: 0.949009
Ran for 33050 frames Cell Events: 1253 mean_circ: 0.94884
Ran for 33550 frames Cell Events: 1267 mean_circ: 0.948779
Ran for 34050 frames Cell Events: 1284 mean_circ: 0.948901
Ran for 34550 frames Cell Events: 1298 mean_circ: 0.948892
Ran for 35550 frames Cell Events: 1324 mean_circ: 0.948793
Ran for 36050 frames Cell Events: 1333 mean_circ: 0.948735
Ran for 37050 frames Cell Events: 1357 mean_circ: 0.948506
Ran for 38050 frames Cell Events: 1392 mean_circ: 0.948318
Ran for 38550 frames Cell Events: 1410 mean_circ: 0.94821
Ran for 39050 frames Cell Events: 1433 mean_circ: 0.948313
Ran for 39550 frames Cell Events: 1448 mean_circ: 0.948421
Ran for 40050 frames Cell Events: 1464 mean_circ: 0.9484
Ran for 41050 frames Cell Events: 1503 mean_circ: 0.948477
Ran for 41550 frames Cell Events: 1516 mean_circ: 0.948513
Ran for 42550 frames Cell Events: 1558 mean_circ: 0.948735
Ran for 43050 frames Cell Events: 1582 mean_circ: 0.948736
Ran for 43550 frames Cell Events: 1607 mean_circ: 0.948813
Ran for 44050 frames Cell Events: 1622 mean_circ: 0.948836
Ran for 45550 frames Cell Events: 1673 mean_circ: 0.948411
Ran for 46050 frames Cell Events: 1698 mean_circ: 0.948412
Ran for 47050 frames Cell Events: 1740 mean_circ: 0.948286
Ran for 47550 frames Cell Events: 1762 mean_circ: 0.948429
Ran for 48050 frames Cell Events: 1775 mean_circ: 0.948298
Ran for 48550 frames Cell Events: 1786 mean_circ: 0.948309
Ran for 49050 frames Cell Events: 1809 mean_circ: 0.948345
Ran for 49550 frames Cell Events: 1829 mean_circ: 0.948436
Ran for 50050 frames Cell Events: 1851 mean_circ: 0.94849
Ran for 50550 frames Cell Events: 1866 mean_circ: 0.948437
Ran for 51550 frames Cell Events: 1907 mean_circ: 0.948455
Ran for 52050 frames Cell Events: 1931 mean_circ: 0.948502
Ran for 52550 frames Cell Events: 1951 mean_circ: 0.948622
Ran for 53550 frames Cell Events: 1987 mean_circ: 0.948692
Ran for 54050 frames Cell Events: 2012 mean_circ: 0.948723
Ran for 55050 frames Cell Events: 2049 mean_circ: 0.948587
Ran for 55550 frames Cell Events: 2070 mean_circ: 0.948528
Ran for 56050 frames Cell Events: 2089 mean_circ: 0.948643
Ran for 56550 frames Cell Events: 2117 mean_circ: 0.948672
Ran for 57050 frames Cell Events: 2144 mean_circ: 0.948744
Ran for 58050 frames Cell Events: 2178 mean_circ: 0.948702
Ran for 60050 frames Cell Events: 2288 mean_circ: 0.948608
Ran for 60550 frames Cell Events: 2308 mean_circ: 0.948723
Ran for 61050 frames Cell Events: 2319 mean_circ: 0.948736
Ran for 62050 frames Cell Events: 2369 mean_circ: 0.948522
Ran for 62550 frames Cell Events: 2392 mean_circ: 0.94848
Ran for 63550 frames Cell Events: 2425 mean_circ: 0.948538
Ran for 64050 frames Cell Events: 2445 mean_circ: 0.948454
Ran for 65550 frames Cell Events: 2521 mean_circ: 0.94841
Ran for 66050 frames Cell Events: 2548 mean_circ: 0.948349
Ran for 66550 frames Cell Events: 2570 mean_circ: 0.948268
Ran for 67050 frames Cell Events: 2589 mean_circ: 0.948224
Ran for 67550 frames Cell Events: 2602 mean_circ: 0.94822
Ran for 68050 frames Cell Events: 2614 mean_circ: 0.948268
Ran for 68550 frames Cell Events: 2629 mean_circ: 0.948198
Ran for 69050 frames Cell Events: 2647 mean_circ: 0.948146
Ran for 69550 frames Cell Events: 2674 mean_circ: 0.948012
Ran for 71050 frames Cell Events: 2738 mean_circ: 0.948154
Ran for 72050 frames Cell Events: 2782 mean_circ: 0.948155
Ran for 73050 frames Cell Events: 2814 mean_circ: 0.948248
Ran for 74050 frames Cell Events: 2852 mean_circ: 0.948259
Ran for 76550 frames Cell Events: 2965 mean_circ: 0.948291
Ran for 77050 frames Cell Events: 2987 mean_circ: 0.948214
Ran for 78050 frames Cell Events: 3034 mean_circ: 0.948109
Ran for 79050 frames Cell Events: 3064 mean_circ: 0.948066
Ran for 79550 frames Cell Events: 3074 mean_circ: 0.948101
Ran for 80050 frames Cell Events: 3096 mean_circ: 0.948024
Ran for 80550 frames Cell Events: 3115 mean_circ: 0.948064
Ran for 81050 frames Cell Events: 3136 mean_circ: 0.948117
Ran for 82050 frames Cell Events: 3166 mean_circ: 0.948123
Ran for 82550 frames Cell Events: 3191 mean_circ: 0.948133
Ran for 83050 frames Cell Events: 3215 mean_circ: 0.948144
Ran for 84050 frames Cell Events: 3275 mean_circ: 0.94791
Ran for 85050 frames Cell Events: 3309 mean_circ: 0.947909
Ran for 86050 frames Cell Events: 3348 mean_circ: 0.947833
Ran for 86550 frames Cell Events: 3364 mean_circ: 0.947823
Ran for 88050 frames Cell Events: 3439 mean_circ: 0.947674
Ran for 89050 frames Cell Events: 3486 mean_circ: 0.947805
Ran for 89550 frames Cell Events: 3499 mean_circ: 0.947718
Ran for 90050 frames Cell Events: 3517 mean_circ: 0.947697
Ran for 90550 frames Cell Events: 3537 mean_circ: 0.947763
Ran for 91050 frames Cell Events: 3556 mean_circ: 0.947795
Ran for 93050 frames Cell Events: 3627 mean_circ: 0.947712
Ran for 93550 frames Cell Events: 3661 mean_circ: 0.947727
Ran for 94050 frames Cell Events: 3687 mean_circ: 0.947716
Ran for 96050 frames Cell Events: 3782 mean_circ: 0.947825
Ran for 97050 frames Cell Events: 3824 mean_circ: 0.947807
Ran for 98550 frames Cell Events: 3888 mean_circ: 0.947585
Ran for 100050 frames Cell Events: 3946 mean_circ: 0.947381
Ran for 101050 frames Cell Events: 3989 mean_circ: 0.947404
Ran for 101550 frames Cell Events: 4006 mean_circ: 0.947444
Ran for 102050 frames Cell Events: 4017 mean_circ: 0.947431
Ran for 102550 frames Cell Events: 4027 mean_circ: 0.947406
Ran for 104050 frames Cell Events: 4099 mean_circ: 0.947371
Ran for 104550 frames Cell Events: 4120 mean_circ: 0.947354
Ran for 105050 frames Cell Events: 4140 mean_circ: 0.947388
Ran for 105550 frames Cell Events: 4152 mean_circ: 0.947437
Ran for 106050 frames Cell Events: 4166 mean_circ: 0.947443
Ran for 106550 frames Cell Events: 4181 mean_circ: 0.947427
Ran for 108050 frames Cell Events: 4227 mean_circ: 0.947444
Ran for 108550 frames Cell Events: 4247 mean_circ: 0.947429
Ran for 109550 frames Cell Events: 4283 mean_circ: 0.947459
Ran for 110050 frames Cell Events: 4310 mean_circ: 0.947428
Ran for 110550 frames Cell Events: 4330 mean_circ: 0.947411
Ran for 111050 frames Cell Events: 4345 mean_circ: 0.947417
Ran for 112550 frames Cell Events: 4408 mean_circ: 0.947438
Ran for 113550 frames Cell Events: 4442 mean_circ: 0.947412
Ran for 114550 frames Cell Events: 4481 mean_circ: 0.947357
Ran for 115550 frames Cell Events: 4526 mean_circ: 0.947334
Ran for 116050 frames Cell Events: 4538 mean_circ: 0.94734
Ran for 116550 frames Cell Events: 4559 mean_circ: 0.947318
Ran for 117550 frames Cell Events: 4606 mean_circ: 0.947303
Ran for 118050 frames Cell Events: 4621 mean_circ: 0.947292
Ran for 119050 frames Cell Events: 4657 mean_circ: 0.947343
Ran for 119550 frames Cell Events: 4682 mean_circ: 0.947333
Ran for 120050 frames Cell Events: 4703 mean_circ: 0.947327
Ran for 121050 frames Cell Events: 4746 mean_circ: 0.947346
Ran for 121550 frames Cell Events: 4772 mean_circ: 0.947396
Ran for 122050 frames Cell Events: 4807 mean_circ: 0.947295
Ran for 123550 frames Cell Events: 4870 mean_circ: 0.947267
Ran for 124050 frames Cell Events: 4890 mean_circ: 0.947302
Ran for 124550 frames Cell Events: 4908 mean_circ: 0.947267
Ran for 125050 frames Cell Events: 4933 mean_circ: 0.94729
Ran for 125550 frames Cell Events: 4956 mean_circ: 0.947283
Ran for 126050 frames Cell Events: 4979 mean_circ: 0.947244
Ran for 128550 frames Cell Events: 5112 mean_circ: 0.947275
Ran for 129550 frames Cell Events: 5156 mean_circ: 0.947269
Ran for 130550 frames Cell Events: 5199 mean_circ: 0.947353
Ran for 131550 frames Cell Events: 5263 mean_circ: 0.94735
Ran for 134050 frames Cell Events: 5386 mean_circ: 0.94733
Ran for 134550 frames Cell Events: 5410 mean_circ: 0.947352
Ran for 136050 frames Cell Events: 5494 mean_circ: 0.947257
Ran for 136550 frames Cell Events: 5516 mean_circ: 0.947296
Ran for 137050 frames Cell Events: 5540 mean_circ: 0.947299
Ran for 137550 frames Cell Events: 5570 mean_circ: 0.947281
Ran for 138050 frames Cell Events: 5594 mean_circ: 0.947265
Ran for 138550 frames Cell Events: 5620 mean_circ: 0.947239
Ran for 139550 frames Cell Events: 5663 mean_circ: 0.947276
Ran for 141550 frames Cell Events: 5760 mean_circ: 0.947278
Ran for 142050 frames Cell Events: 5774 mean_circ: 0.947307
Ran for 143050 frames Cell Events: 5827 mean_circ: 0.947361
Ran for 144050 frames Cell Events: 5875 mean_circ: 0.94737
Ran for 145550 frames Cell Events: 5937 mean_circ: 0.947431
Ran for 146050 frames Cell Events: 5964 mean_circ: 0.947392
Ran for 146550 frames Cell Events: 5984 mean_circ: 0.947401
Ran for 148050 frames Cell Events: 6056 mean_circ: 0.947366
Ran for 148550 frames Cell Events: 6082 mean_circ: 0.947407
Ran for 150550 frames Cell Events: 6159 mean_circ: 0.94738
Ran for 151050 frames Cell Events: 6183 mean_circ: 0.947346
Ran for 151550 frames Cell Events: 6203 mean_circ: 0.947338
Ran for 152050 frames Cell Events: 6220 mean_circ: 0.947345
Ran for 154050 frames Cell Events: 6300 mean_circ: 0.947305
Ran for 155050 frames Cell Events: 6330 mean_circ: 0.947302
Ran for 156050 frames Cell Events: 6366 mean_circ: 0.947311
Ran for 157050 frames Cell Events: 6404 mean_circ: 0.947302
Ran for 157550 frames Cell Events: 6419 mean_circ: 0.947311
Ran for 158050 frames Cell Events: 6439 mean_circ: 0.947319
Ran for 159050 frames Cell Events: 6488 mean_circ: 0.947333
Ran for 160050 frames Cell Events: 6523 mean_circ: 0.947295
Ran for 161550 frames Cell Events: 6588 mean_circ: 0.94733
Ran for 162550 frames Cell Events: 6635 mean_circ: 0.947389
Ran for 163550 frames Cell Events: 6670 mean_circ: 0.947327
Ran for 164050 frames Cell Events: 6689 mean_circ: 0.947322
Ran for 164550 frames Cell Events: 6707 mean_circ: 0.947301
Ran for 165050 frames Cell Events: 6721 mean_circ: 0.947307
Ran for 166050 frames Cell Events: 6769 mean_circ: 0.947361
Ran for 167550 frames Cell Events: 6838 mean_circ: 0.947345
Ran for 168050 frames Cell Events: 6866 mean_circ: 0.947373
Ran for 168550 frames Cell Events: 6886 mean_circ: 0.947353
Ran for 169050 frames Cell Events: 6913 mean_circ: 0.94738
Ran for 169550 frames Cell Events: 6937 mean_circ: 0.947392
Ran for 170050 frames Cell Events: 6959 mean_circ: 0.947439
Ran for 170550 frames Cell Events: 6983 mean_circ: 0.947413
Ran for 171050 frames Cell Events: 7001 mean_circ: 0.947426
Ran for 171550 frames Cell Events: 7019 mean_circ: 0.947434
Ran for 172550 frames Cell Events: 7059 mean_circ: 0.947437
Ran for 173550 frames Cell Events: 7109 mean_circ: 0.947447
Ran for 174050 frames Cell Events: 7127 mean_circ: 0.947467
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Ran for 177050 frames Cell Events: 7264 mean_circ: 0.947388
Ran for 178550 frames Cell Events: 7330 mean_circ: 0.947432
Ran for 179050 frames Cell Events: 7353 mean_circ: 0.947455
Ran for 180050 frames Cell Events: 7413 mean_circ: 0.947533
Ran for 180550 frames Cell Events: 7431 mean_circ: 0.947538
Ran for 182550 frames Cell Events: 7530 mean_circ: 0.947565
Ran for 184050 frames Cell Events: 7592 mean_circ: 0.94753
Ran for 184550 frames Cell Events: 7623 mean_circ: 0.947533
Ran for 185050 frames Cell Events: 7646 mean_circ: 0.947528
Ran for 185550 frames Cell Events: 7661 mean_circ: 0.947529
Ran for 186550 frames Cell Events: 7708 mean_circ: 0.947517
Ran for 187050 frames Cell Events: 7731 mean_circ: 0.947462
Ran for 188050 frames Cell Events: 7780 mean_circ: 0.947436
Ran for 188550 frames Cell Events: 7796 mean_circ: 0.947412
Ran for 189050 frames Cell Events: 7812 mean_circ: 0.947413
Ran for 189550 frames Cell Events: 7833 mean_circ: 0.94742
Ran for 190050 frames Cell Events: 7855 mean_circ: 0.947453
Ran for 190550 frames Cell Events: 7878 mean_circ: 0.947472
Ran for 191050 frames Cell Events: 7897 mean_circ: 0.947483
Ran for 191550 frames Cell Events: 7923 mean_circ: 0.94749
Ran for 192050 frames Cell Events: 7944 mean_circ: 0.947501
Ran for 192550 frames Cell Events: 7958 mean_circ: 0.947525
Ran for 193050 frames Cell Events: 7979 mean_circ: 0.94754
Ran for 193550 frames Cell Events: 8006 mean_circ: 0.947556
Ran for 194050 frames Cell Events: 8028 mean_circ: 0.94757
Ran for 194550 frames Cell Events: 8061 mean_circ: 0.947594
Ran for 195050 frames Cell Events: 8074 mean_circ: 0.947584
Ran for 195550 frames Cell Events: 8098 mean_circ: 0.947558
Ran for 196050 frames Cell Events: 8118 mean_circ: 0.947581
Ran for 196550 frames Cell Events: 8143 mean_circ: 0.947577
Ran for 197050 frames Cell Events: 8161 mean_circ: 0.947582
Ran for 197550 frames Cell Events: 8185 mean_circ: 0.947588
Ran for 198050 frames Cell Events: 8207 mean_circ: 0.947622
Ran for 198550 frames Cell Events: 8223 mean_circ: 0.947611
Ran for 199050 frames Cell Events: 8236 mean_circ: 0.947629
Ran for 200050 frames Cell Events: 8279 mean_circ: 0.947633
Ran for 200550 frames Cell Events: 8298 mean_circ: 0.947632
Ran for 201550 frames Cell Events: 8329 mean_circ: 0.947669
Ran for 202550 frames Cell Events: 8363 mean_circ: 0.947717
Ran for 203050 frames Cell Events: 8378 mean_circ: 0.947749
Ran for 203550 frames Cell Events: 8396 mean_circ: 0.947753
Ran for 204050 frames Cell Events: 8411 mean_circ: 0.947753
Ran for 204550 frames Cell Events: 8437 mean_circ: 0.947783
Ran for 205050 frames Cell Events: 8459 mean_circ: 0.947772
Ran for 206050 frames Cell Events: 8505 mean_circ: 0.947731
Ran for 206550 frames Cell Events: 8521 mean_circ: 0.947756
Ran for 207050 frames Cell Events: 8535 mean_circ: 0.947762
Ran for 207550 frames Cell Events: 8562 mean_circ: 0.947729
Ran for 208550 frames Cell Events: 8616 mean_circ: 0.947791
Ran for 209050 frames Cell Events: 8636 mean_circ: 0.947781
Ran for 209550 frames Cell Events: 8658 mean_circ: 0.947772
Ran for 211550 frames Cell Events: 8757 mean_circ: 0.947867
Ran for 212050 frames Cell Events: 8782 mean_circ: 0.947879
Ran for 213050 frames Cell Events: 8819 mean_circ: 0.947906
Ran for 213550 frames Cell Events: 8840 mean_circ: 0.947903
Ran for 214550 frames Cell Events: 8879 mean_circ: 0.947952
Ran for 216050 frames Cell Events: 8954 mean_circ: 0.947956
Ran for 217050 frames Cell Events: 8995 mean_circ: 0.947951
Ran for 217550 frames Cell Events: 9011 mean_circ: 0.947973
Ran for 218050 frames Cell Events: 9041 mean_circ: 0.947974
Ran for 220050 frames Cell Events: 9150 mean_circ: 0.947991
Ran for 220550 frames Cell Events: 9181 mean_circ: 0.948027
Ran for 221050 frames Cell Events: 9202 mean_circ: 0.948014
Ran for 222550 frames Cell Events: 9272 mean_circ: 0.947996
Ran for 223550 frames Cell Events: 9319 mean_circ: 0.948003
Ran for 224050 frames Cell Events: 9354 mean_circ: 0.948002
Ran for 224550 frames Cell Events: 9384 mean_circ: 0.948002
Ran for 225050 frames Cell Events: 9405 mean_circ: 0.948031
Ran for 225550 frames Cell Events: 9429 mean_circ: 0.948012
Ran for 226050 frames Cell Events: 9454 mean_circ: 0.948032
Ran for 227550 frames Cell Events: 9509 mean_circ: 0.948073
Ran for 228550 frames Cell Events: 9562 mean_circ: 0.948109
Ran for 229050 frames Cell Events: 9585 mean_circ: 0.948146
Ran for 229550 frames Cell Events: 9606 mean_circ: 0.948166
Ran for 230550 frames Cell Events: 9667 mean_circ: 0.948223
Ran for 231050 frames Cell Events: 9685 mean_circ: 0.948216
Ran for 232550 frames Cell Events: 9737 mean_circ: 0.948265
Ran for 233050 frames Cell Events: 9761 mean_circ: 0.948277
Ran for 233550 frames Cell Events: 9781 mean_circ: 0.948284
Ran for 234050 frames Cell Events: 9805 mean_circ: 0.948251
Ran for 234550 frames Cell Events: 9829 mean_circ: 0.948229
Ran for 235050 frames Cell Events: 9850 mean_circ: 0.94824
Ran for 236550 frames Cell Events: 9903 mean_circ: 0.948254



End this measurment.
because stop condition (time/nr of cells) was met

Stopping time: 1.77313e+009
****************************************
Measurement finished

Mean Circularitiy: 0.948147
Mean Area: 613.95
Mean FL-1 intensity: 3940.12
Mean FL-2 intensity: 4691.23
Mean FL-3 intensity: 0

frames processed: 238497
Total Time: 119418ms
Number of Runs (new bg img) 0
Frames collected: 238671
Skipped frames: 182571
Rescued Frames: 6694004
Samples DAQ: 59667869
Samples written: 119335300
Samples per Channel: 59667650
FPS: 1998.61

Samples per second: 499652
Expected samples/s: 500000

Events: 10001
Events per second: 83.7476
jumped back (PMT): 5569
#Frames read, frequency
# 0 frames :347929
# 1 frames :109970
# 2 frames :5246
# 3 frames :1878
# 4 frames :1109
# 5 frames :474
# 6 frames :1687
# 7 frames :2177
# 8 frames :1305
# 9 frames :783
# 10 frames :1223
# 11 frames :662
# 12 frames :508
# 13 frames :299
# 14 frames :267
# 15 frames :306
# 16 frames :237
# 17 frames :200
# 18 frames :136
# 19 frames :110
# 20 frames :82
# 21 frames :62
# 22 frames :60
# 23 frames :62
# 24 frames :41
# 25 frames :43
# 26 frames :27
# 27 frames :28
# 28 frames :19
# 29 frames :21
# 30 frames :10
# 31 frames :13
# 32 frames :14
# 33 frames :7
# 34 frames :4
# 35 frames :7
# 36 frames :3
# 37 frames :4
# 38 frames :3
# 39 frames :5
# 40 frames :2
# 41 frames :1
# 42 frames :2
# 43 frames :2
# 44 frames :1
# 45 frames :1
# 46 frames :1
# 47 frames :2
# 55 frames :2
# 64 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.3361
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0