Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_13.14.48 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "b07cf9717b15bc8815d81a68cc897198",
"name": "M1_20170605_1551_dsRNA_J7_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "11:15:08"
}
}
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.4005
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.84133e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.931139
Ran for 1050 frames Cell Events: 36 mean_circ: 0.952733
Ran for 1550 frames Cell Events: 52 mean_circ: 0.946459
Ran for 3050 frames Cell Events: 103 mean_circ: 0.950595
Ran for 4050 frames Cell Events: 143 mean_circ: 0.95082
Ran for 4550 frames Cell Events: 156 mean_circ: 0.951044
Ran for 5050 frames Cell Events: 171 mean_circ: 0.951257
Ran for 5550 frames Cell Events: 185 mean_circ: 0.951719
Ran for 6550 frames Cell Events: 224 mean_circ: 0.9514
Ran for 7050 frames Cell Events: 243 mean_circ: 0.949601
Ran for 7550 frames Cell Events: 251 mean_circ: 0.949727
Ran for 8050 frames Cell Events: 267 mean_circ: 0.950209
Ran for 8550 frames Cell Events: 279 mean_circ: 0.949846
Ran for 9050 frames Cell Events: 296 mean_circ: 0.949465
Ran for 9550 frames Cell Events: 320 mean_circ: 0.948493
Ran for 10050 frames Cell Events: 336 mean_circ: 0.949263
Ran for 11550 frames Cell Events: 394 mean_circ: 0.947648
Ran for 12050 frames Cell Events: 419 mean_circ: 0.946574
Ran for 12550 frames Cell Events: 431 mean_circ: 0.947167
Ran for 13050 frames Cell Events: 448 mean_circ: 0.947276
Ran for 13550 frames Cell Events: 478 mean_circ: 0.947494
Ran for 14050 frames Cell Events: 493 mean_circ: 0.947618
Ran for 15050 frames Cell Events: 537 mean_circ: 0.946881
Ran for 15550 frames Cell Events: 561 mean_circ: 0.947293
Ran for 16050 frames Cell Events: 571 mean_circ: 0.94724
Ran for 16550 frames Cell Events: 583 mean_circ: 0.947381
Ran for 17050 frames Cell Events: 604 mean_circ: 0.947494
Ran for 17550 frames Cell Events: 622 mean_circ: 0.947754
Ran for 18050 frames Cell Events: 644 mean_circ: 0.947065
Ran for 18550 frames Cell Events: 662 mean_circ: 0.947161
Ran for 19050 frames Cell Events: 679 mean_circ: 0.947276
Ran for 20050 frames Cell Events: 709 mean_circ: 0.947201
Ran for 20550 frames Cell Events: 733 mean_circ: 0.947154
Ran for 21050 frames Cell Events: 753 mean_circ: 0.947279
Ran for 22050 frames Cell Events: 796 mean_circ: 0.947021
Ran for 22550 frames Cell Events: 818 mean_circ: 0.947227
Ran for 23050 frames Cell Events: 839 mean_circ: 0.947158
Ran for 23550 frames Cell Events: 858 mean_circ: 0.946918
Ran for 24050 frames Cell Events: 884 mean_circ: 0.946685
Ran for 24550 frames Cell Events: 900 mean_circ: 0.946415
Ran for 26550 frames Cell Events: 951 mean_circ: 0.946675
Ran for 27050 frames Cell Events: 967 mean_circ: 0.946828
Ran for 27550 frames Cell Events: 990 mean_circ: 0.946874
Ran for 28050 frames Cell Events: 1008 mean_circ: 0.946895
Ran for 29550 frames Cell Events: 1065 mean_circ: 0.946557
Ran for 31050 frames Cell Events: 1120 mean_circ: 0.946532
Ran for 31550 frames Cell Events: 1139 mean_circ: 0.946567
Ran for 32050 frames Cell Events: 1149 mean_circ: 0.946653
Ran for 32550 frames Cell Events: 1163 mean_circ: 0.946705
Ran for 33550 frames Cell Events: 1204 mean_circ: 0.946861
Ran for 34050 frames Cell Events: 1215 mean_circ: 0.94679
Ran for 34550 frames Cell Events: 1229 mean_circ: 0.946963
Ran for 35050 frames Cell Events: 1241 mean_circ: 0.946869
Ran for 35550 frames Cell Events: 1251 mean_circ: 0.946802
Ran for 36050 frames Cell Events: 1269 mean_circ: 0.946692
Ran for 36550 frames Cell Events: 1285 mean_circ: 0.946583
Ran for 37050 frames Cell Events: 1297 mean_circ: 0.946626
Ran for 37550 frames Cell Events: 1321 mean_circ: 0.94657
Ran for 38050 frames Cell Events: 1339 mean_circ: 0.946521
Ran for 38550 frames Cell Events: 1355 mean_circ: 0.946526
Ran for 39050 frames Cell Events: 1376 mean_circ: 0.946455
Ran for 39550 frames Cell Events: 1394 mean_circ: 0.946222
Ran for 40550 frames Cell Events: 1412 mean_circ: 0.946142
Ran for 41050 frames Cell Events: 1430 mean_circ: 0.946249
Ran for 41550 frames Cell Events: 1448 mean_circ: 0.94646
Ran for 42050 frames Cell Events: 1462 mean_circ: 0.946558
Ran for 43050 frames Cell Events: 1489 mean_circ: 0.946691
Ran for 43550 frames Cell Events: 1503 mean_circ: 0.946707
Ran for 44050 frames Cell Events: 1516 mean_circ: 0.946637
Ran for 44550 frames Cell Events: 1534 mean_circ: 0.946621
Ran for 45050 frames Cell Events: 1550 mean_circ: 0.946702
Ran for 45550 frames Cell Events: 1569 mean_circ: 0.946734
Ran for 46550 frames Cell Events: 1607 mean_circ: 0.946736
Ran for 47050 frames Cell Events: 1631 mean_circ: 0.946697
Ran for 47550 frames Cell Events: 1661 mean_circ: 0.946851
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Ran for 48550 frames Cell Events: 1689 mean_circ: 0.94695
Ran for 49050 frames Cell Events: 1711 mean_circ: 0.947088
Ran for 49550 frames Cell Events: 1725 mean_circ: 0.94711
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Ran for 51050 frames Cell Events: 1780 mean_circ: 0.94709
Ran for 51550 frames Cell Events: 1790 mean_circ: 0.947054
Ran for 52550 frames Cell Events: 1828 mean_circ: 0.947249
Ran for 53050 frames Cell Events: 1843 mean_circ: 0.947229
Ran for 53550 frames Cell Events: 1863 mean_circ: 0.946818
Ran for 54050 frames Cell Events: 1882 mean_circ: 0.946877
Ran for 54550 frames Cell Events: 1905 mean_circ: 0.946849
Ran for 55550 frames Cell Events: 1938 mean_circ: 0.946941
Ran for 56050 frames Cell Events: 1958 mean_circ: 0.946951
Ran for 57550 frames Cell Events: 2011 mean_circ: 0.947094
Ran for 58550 frames Cell Events: 2066 mean_circ: 0.946698
Ran for 59050 frames Cell Events: 2091 mean_circ: 0.94654
Ran for 59550 frames Cell Events: 2103 mean_circ: 0.946436
Ran for 60050 frames Cell Events: 2116 mean_circ: 0.946508
Ran for 60550 frames Cell Events: 2137 mean_circ: 0.946542
Ran for 61050 frames Cell Events: 2152 mean_circ: 0.94649
Ran for 61550 frames Cell Events: 2168 mean_circ: 0.946503
Ran for 62050 frames Cell Events: 2187 mean_circ: 0.946512
Ran for 62550 frames Cell Events: 2201 mean_circ: 0.946577
Ran for 63050 frames Cell Events: 2215 mean_circ: 0.946622
Ran for 63550 frames Cell Events: 2226 mean_circ: 0.946607
Ran for 64050 frames Cell Events: 2244 mean_circ: 0.946634
Ran for 64550 frames Cell Events: 2260 mean_circ: 0.946708
Ran for 65050 frames Cell Events: 2276 mean_circ: 0.946759
Ran for 66050 frames Cell Events: 2324 mean_circ: 0.946854
Ran for 66550 frames Cell Events: 2344 mean_circ: 0.946845
Ran for 67050 frames Cell Events: 2361 mean_circ: 0.946865
Ran for 67550 frames Cell Events: 2381 mean_circ: 0.946797
Ran for 69050 frames Cell Events: 2433 mean_circ: 0.946831
Ran for 69550 frames Cell Events: 2446 mean_circ: 0.946865
Ran for 70050 frames Cell Events: 2460 mean_circ: 0.946841
Ran for 71050 frames Cell Events: 2494 mean_circ: 0.946848
Ran for 71550 frames Cell Events: 2517 mean_circ: 0.946759
Ran for 72050 frames Cell Events: 2531 mean_circ: 0.946593
Ran for 72550 frames Cell Events: 2537 mean_circ: 0.946626
Ran for 73050 frames Cell Events: 2544 mean_circ: 0.946619
Ran for 73550 frames Cell Events: 2565 mean_circ: 0.946561
Ran for 74050 frames Cell Events: 2581 mean_circ: 0.946629
Ran for 74550 frames Cell Events: 2600 mean_circ: 0.946656
Ran for 75050 frames Cell Events: 2627 mean_circ: 0.946601
Ran for 75550 frames Cell Events: 2646 mean_circ: 0.946635
Ran for 76050 frames Cell Events: 2653 mean_circ: 0.946548
Ran for 77050 frames Cell Events: 2689 mean_circ: 0.946555
Ran for 77550 frames Cell Events: 2699 mean_circ: 0.946579
Ran for 78050 frames Cell Events: 2716 mean_circ: 0.946427
Ran for 78550 frames Cell Events: 2723 mean_circ: 0.946418
Ran for 79050 frames Cell Events: 2738 mean_circ: 0.94642
Ran for 79550 frames Cell Events: 2755 mean_circ: 0.946411
Ran for 80050 frames Cell Events: 2770 mean_circ: 0.946409
Ran for 81050 frames Cell Events: 2801 mean_circ: 0.946405
Ran for 81550 frames Cell Events: 2814 mean_circ: 0.946455
Ran for 82050 frames Cell Events: 2829 mean_circ: 0.946316
Ran for 82550 frames Cell Events: 2839 mean_circ: 0.946324
Ran for 83050 frames Cell Events: 2856 mean_circ: 0.946385
Ran for 83550 frames Cell Events: 2878 mean_circ: 0.946415
Ran for 84550 frames Cell Events: 2915 mean_circ: 0.946498
Ran for 85050 frames Cell Events: 2928 mean_circ: 0.946465
Ran for 85550 frames Cell Events: 2940 mean_circ: 0.946474
Ran for 86550 frames Cell Events: 2956 mean_circ: 0.946401
Ran for 87050 frames Cell Events: 2968 mean_circ: 0.946327
Ran for 87550 frames Cell Events: 2978 mean_circ: 0.946344
Ran for 88050 frames Cell Events: 2997 mean_circ: 0.946421
Ran for 88550 frames Cell Events: 3017 mean_circ: 0.946432
Ran for 89050 frames Cell Events: 3036 mean_circ: 0.946465
Ran for 89550 frames Cell Events: 3052 mean_circ: 0.946469
Ran for 90050 frames Cell Events: 3067 mean_circ: 0.946485
Ran for 90550 frames Cell Events: 3084 mean_circ: 0.946542
Ran for 91050 frames Cell Events: 3090 mean_circ: 0.946585
Ran for 91550 frames Cell Events: 3104 mean_circ: 0.946612
Ran for 92550 frames Cell Events: 3145 mean_circ: 0.946574
Ran for 93550 frames Cell Events: 3179 mean_circ: 0.946664
Ran for 94550 frames Cell Events: 3219 mean_circ: 0.94663
Ran for 95550 frames Cell Events: 3241 mean_circ: 0.946672
Ran for 96050 frames Cell Events: 3270 mean_circ: 0.946676
Ran for 97050 frames Cell Events: 3308 mean_circ: 0.946656
Ran for 97550 frames Cell Events: 3322 mean_circ: 0.946559
Ran for 98050 frames Cell Events: 3353 mean_circ: 0.946564
Ran for 98550 frames Cell Events: 3368 mean_circ: 0.946567
Ran for 99050 frames Cell Events: 3383 mean_circ: 0.946618
Ran for 99550 frames Cell Events: 3394 mean_circ: 0.946616
Ran for 100050 frames Cell Events: 3413 mean_circ: 0.946576
Ran for 100550 frames Cell Events: 3438 mean_circ: 0.946612
Ran for 101050 frames Cell Events: 3452 mean_circ: 0.946604
Ran for 102050 frames Cell Events: 3471 mean_circ: 0.946606
Ran for 102550 frames Cell Events: 3485 mean_circ: 0.946564
Ran for 103050 frames Cell Events: 3506 mean_circ: 0.946464
Ran for 104050 frames Cell Events: 3542 mean_circ: 0.946575
Ran for 104550 frames Cell Events: 3561 mean_circ: 0.946619
Ran for 105050 frames Cell Events: 3585 mean_circ: 0.94667
Ran for 106050 frames Cell Events: 3621 mean_circ: 0.946698
Ran for 107550 frames Cell Events: 3693 mean_circ: 0.946799
Ran for 108050 frames Cell Events: 3699 mean_circ: 0.946769
Ran for 108550 frames Cell Events: 3720 mean_circ: 0.946715
Ran for 109050 frames Cell Events: 3741 mean_circ: 0.946685
Ran for 109550 frames Cell Events: 3750 mean_circ: 0.94674
Ran for 110550 frames Cell Events: 3781 mean_circ: 0.946716
Ran for 111550 frames Cell Events: 3813 mean_circ: 0.946568
Ran for 112550 frames Cell Events: 3861 mean_circ: 0.94653
Ran for 113050 frames Cell Events: 3870 mean_circ: 0.946609
Ran for 113550 frames Cell Events: 3879 mean_circ: 0.946625
Ran for 114050 frames Cell Events: 3893 mean_circ: 0.946632
Ran for 114550 frames Cell Events: 3907 mean_circ: 0.946637
Ran for 115050 frames Cell Events: 3918 mean_circ: 0.946638
Ran for 116050 frames Cell Events: 3962 mean_circ: 0.946581
Ran for 116550 frames Cell Events: 3988 mean_circ: 0.946566
Ran for 117050 frames Cell Events: 3999 mean_circ: 0.946602
Ran for 118050 frames Cell Events: 4029 mean_circ: 0.946612
Ran for 118550 frames Cell Events: 4046 mean_circ: 0.946599
Ran for 119050 frames Cell Events: 4067 mean_circ: 0.946641
Ran for 119550 frames Cell Events: 4088 mean_circ: 0.946652
Ran for 120050 frames Cell Events: 4103 mean_circ: 0.946707
Ran for 120550 frames Cell Events: 4112 mean_circ: 0.946734
Ran for 121050 frames Cell Events: 4127 mean_circ: 0.946704
Ran for 122050 frames Cell Events: 4160 mean_circ: 0.946674
Ran for 123550 frames Cell Events: 4214 mean_circ: 0.946658
Ran for 124050 frames Cell Events: 4225 mean_circ: 0.946681
Ran for 125050 frames Cell Events: 4266 mean_circ: 0.946627
Ran for 125550 frames Cell Events: 4284 mean_circ: 0.946653
Ran for 126050 frames Cell Events: 4306 mean_circ: 0.946638
Ran for 126550 frames Cell Events: 4312 mean_circ: 0.946652
Ran for 127050 frames Cell Events: 4336 mean_circ: 0.946653
Ran for 127550 frames Cell Events: 4349 mean_circ: 0.946663
Ran for 128550 frames Cell Events: 4388 mean_circ: 0.946709
Ran for 129050 frames Cell Events: 4411 mean_circ: 0.946734
Ran for 129550 frames Cell Events: 4421 mean_circ: 0.946756
Ran for 130050 frames Cell Events: 4433 mean_circ: 0.946725
Ran for 130550 frames Cell Events: 4442 mean_circ: 0.946753
Ran for 131050 frames Cell Events: 4461 mean_circ: 0.946781
Ran for 131550 frames Cell Events: 4477 mean_circ: 0.946772
Ran for 132050 frames Cell Events: 4497 mean_circ: 0.94678
Ran for 133050 frames Cell Events: 4533 mean_circ: 0.946874
Ran for 133550 frames Cell Events: 4553 mean_circ: 0.946827
Ran for 134050 frames Cell Events: 4569 mean_circ: 0.946811
Ran for 134550 frames Cell Events: 4588 mean_circ: 0.94686
Ran for 135050 frames Cell Events: 4603 mean_circ: 0.946857
Ran for 135550 frames Cell Events: 4620 mean_circ: 0.946887
Ran for 136050 frames Cell Events: 4635 mean_circ: 0.946917
Ran for 137550 frames Cell Events: 4676 mean_circ: 0.946922
Ran for 138050 frames Cell Events: 4692 mean_circ: 0.946949
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Ran for 142050 frames Cell Events: 4818 mean_circ: 0.947007
Ran for 143050 frames Cell Events: 4854 mean_circ: 0.947032
Ran for 143550 frames Cell Events: 4874 mean_circ: 0.947036
Ran for 144550 frames Cell Events: 4911 mean_circ: 0.947036
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Ran for 145550 frames Cell Events: 4946 mean_circ: 0.947092
Ran for 146050 frames Cell Events: 4966 mean_circ: 0.947133
Ran for 146550 frames Cell Events: 4989 mean_circ: 0.947157
Ran for 147050 frames Cell Events: 5002 mean_circ: 0.947155
Ran for 148050 frames Cell Events: 5058 mean_circ: 0.947159
Ran for 148550 frames Cell Events: 5071 mean_circ: 0.947117
Ran for 150050 frames Cell Events: 5141 mean_circ: 0.946977
Ran for 150550 frames Cell Events: 5161 mean_circ: 0.94696
Ran for 151050 frames Cell Events: 5190 mean_circ: 0.94693
Ran for 151550 frames Cell Events: 5206 mean_circ: 0.946953
Ran for 153050 frames Cell Events: 5285 mean_circ: 0.946889
Ran for 153550 frames Cell Events: 5308 mean_circ: 0.946841
Ran for 154050 frames Cell Events: 5328 mean_circ: 0.946855
Ran for 154550 frames Cell Events: 5346 mean_circ: 0.946873
Ran for 155050 frames Cell Events: 5369 mean_circ: 0.94691
Ran for 155550 frames Cell Events: 5394 mean_circ: 0.946957
Ran for 156050 frames Cell Events: 5413 mean_circ: 0.946994
Ran for 156550 frames Cell Events: 5434 mean_circ: 0.947
Ran for 157050 frames Cell Events: 5445 mean_circ: 0.946943
Ran for 157550 frames Cell Events: 5471 mean_circ: 0.946948
Ran for 158050 frames Cell Events: 5491 mean_circ: 0.946928
Ran for 158550 frames Cell Events: 5501 mean_circ: 0.94695
Ran for 159050 frames Cell Events: 5519 mean_circ: 0.946965
Ran for 159550 frames Cell Events: 5533 mean_circ: 0.947011
Ran for 160050 frames Cell Events: 5554 mean_circ: 0.947042
Ran for 160550 frames Cell Events: 5565 mean_circ: 0.947063
Ran for 161050 frames Cell Events: 5579 mean_circ: 0.947079
Ran for 161550 frames Cell Events: 5603 mean_circ: 0.947065
Ran for 162550 frames Cell Events: 5642 mean_circ: 0.94708
Ran for 163050 frames Cell Events: 5655 mean_circ: 0.947089
Ran for 164050 frames Cell Events: 5690 mean_circ: 0.947177
Ran for 165050 frames Cell Events: 5725 mean_circ: 0.94717
Ran for 165550 frames Cell Events: 5738 mean_circ: 0.947126
Ran for 166050 frames Cell Events: 5752 mean_circ: 0.947088
Ran for 166550 frames Cell Events: 5777 mean_circ: 0.94707
Ran for 167050 frames Cell Events: 5800 mean_circ: 0.947069
Ran for 167550 frames Cell Events: 5832 mean_circ: 0.947107
Ran for 168550 frames Cell Events: 5872 mean_circ: 0.947108
Ran for 169050 frames Cell Events: 5887 mean_circ: 0.94708
Ran for 170050 frames Cell Events: 5898 mean_circ: 0.947076
Ran for 170550 frames Cell Events: 5915 mean_circ: 0.947086
Ran for 171050 frames Cell Events: 5927 mean_circ: 0.947086
Ran for 172050 frames Cell Events: 5966 mean_circ: 0.94705
Ran for 172550 frames Cell Events: 5980 mean_circ: 0.947083
Ran for 173050 frames Cell Events: 6006 mean_circ: 0.947105
Ran for 174050 frames Cell Events: 6038 mean_circ: 0.947078
Ran for 174550 frames Cell Events: 6062 mean_circ: 0.947119
Ran for 175050 frames Cell Events: 6080 mean_circ: 0.947128
Ran for 176050 frames Cell Events: 6118 mean_circ: 0.947142
Ran for 176550 frames Cell Events: 6132 mean_circ: 0.947132
Ran for 177050 frames Cell Events: 6158 mean_circ: 0.947087
Ran for 177550 frames Cell Events: 6177 mean_circ: 0.947098
Ran for 178050 frames Cell Events: 6194 mean_circ: 0.947122
Ran for 179050 frames Cell Events: 6213 mean_circ: 0.947054
Ran for 179550 frames Cell Events: 6226 mean_circ: 0.94707
Ran for 180050 frames Cell Events: 6245 mean_circ: 0.947098
Ran for 180550 frames Cell Events: 6260 mean_circ: 0.947125
Ran for 182050 frames Cell Events: 6312 mean_circ: 0.947129
Ran for 182550 frames Cell Events: 6335 mean_circ: 0.94713
Ran for 183550 frames Cell Events: 6371 mean_circ: 0.947141
Ran for 184550 frames Cell Events: 6411 mean_circ: 0.947151
Ran for 186050 frames Cell Events: 6465 mean_circ: 0.947118
Ran for 186550 frames Cell Events: 6487 mean_circ: 0.947154
Ran for 187050 frames Cell Events: 6507 mean_circ: 0.947162
Ran for 187550 frames Cell Events: 6520 mean_circ: 0.947158
Ran for 188050 frames Cell Events: 6543 mean_circ: 0.947127
Ran for 188550 frames Cell Events: 6561 mean_circ: 0.947151
Ran for 190050 frames Cell Events: 6610 mean_circ: 0.947182
Ran for 190550 frames Cell Events: 6625 mean_circ: 0.947178
Ran for 191050 frames Cell Events: 6636 mean_circ: 0.947187
Ran for 191550 frames Cell Events: 6655 mean_circ: 0.947155
Ran for 192550 frames Cell Events: 6685 mean_circ: 0.947147
Ran for 193050 frames Cell Events: 6708 mean_circ: 0.947046
Ran for 194550 frames Cell Events: 6774 mean_circ: 0.947069
Ran for 195050 frames Cell Events: 6786 mean_circ: 0.947052
Ran for 195550 frames Cell Events: 6801 mean_circ: 0.947084
Ran for 196050 frames Cell Events: 6820 mean_circ: 0.947109
Ran for 196550 frames Cell Events: 6837 mean_circ: 0.94708
Ran for 197050 frames Cell Events: 6859 mean_circ: 0.947124
Ran for 197550 frames Cell Events: 6883 mean_circ: 0.947145
Ran for 199550 frames Cell Events: 6970 mean_circ: 0.947185
Ran for 200050 frames Cell Events: 6985 mean_circ: 0.947201
Ran for 200550 frames Cell Events: 7016 mean_circ: 0.947204
Ran for 201050 frames Cell Events: 7028 mean_circ: 0.947207
Ran for 201550 frames Cell Events: 7048 mean_circ: 0.947198
Ran for 202050 frames Cell Events: 7068 mean_circ: 0.947254
Ran for 202550 frames Cell Events: 7082 mean_circ: 0.947263
Ran for 203050 frames Cell Events: 7098 mean_circ: 0.947211
Ran for 203550 frames Cell Events: 7119 mean_circ: 0.947205
Ran for 204050 frames Cell Events: 7129 mean_circ: 0.947198
Ran for 205050 frames Cell Events: 7152 mean_circ: 0.947232
Ran for 206050 frames Cell Events: 7199 mean_circ: 0.947262
Ran for 206550 frames Cell Events: 7226 mean_circ: 0.947234
Ran for 207550 frames Cell Events: 7261 mean_circ: 0.947241
Ran for 208050 frames Cell Events: 7277 mean_circ: 0.947269
Ran for 208550 frames Cell Events: 7300 mean_circ: 0.9473
Ran for 209550 frames Cell Events: 7335 mean_circ: 0.947357
Ran for 210050 frames Cell Events: 7366 mean_circ: 0.947361
Ran for 210550 frames Cell Events: 7382 mean_circ: 0.947398
Ran for 211050 frames Cell Events: 7394 mean_circ: 0.947385
Ran for 211550 frames Cell Events: 7411 mean_circ: 0.947418
Ran for 212050 frames Cell Events: 7430 mean_circ: 0.947444
Ran for 212550 frames Cell Events: 7455 mean_circ: 0.947407
Ran for 213050 frames Cell Events: 7485 mean_circ: 0.947446
Ran for 213550 frames Cell Events: 7507 mean_circ: 0.947419
Ran for 214050 frames Cell Events: 7523 mean_circ: 0.947422
Ran for 214550 frames Cell Events: 7542 mean_circ: 0.947428
Ran for 215050 frames Cell Events: 7559 mean_circ: 0.947433
Ran for 216050 frames Cell Events: 7591 mean_circ: 0.947444
Ran for 216550 frames Cell Events: 7611 mean_circ: 0.947432
Ran for 217050 frames Cell Events: 7640 mean_circ: 0.947455
Ran for 217550 frames Cell Events: 7652 mean_circ: 0.947456
Ran for 218050 frames Cell Events: 7671 mean_circ: 0.947435
Ran for 219050 frames Cell Events: 7719 mean_circ: 0.94741
Ran for 219550 frames Cell Events: 7732 mean_circ: 0.947414
Ran for 220050 frames Cell Events: 7755 mean_circ: 0.947395
Ran for 220550 frames Cell Events: 7769 mean_circ: 0.947373
Ran for 221050 frames Cell Events: 7789 mean_circ: 0.947353
Ran for 221550 frames Cell Events: 7807 mean_circ: 0.947324
Ran for 222050 frames Cell Events: 7821 mean_circ: 0.9473
Ran for 222550 frames Cell Events: 7842 mean_circ: 0.947287
Ran for 223050 frames Cell Events: 7852 mean_circ: 0.947316
Ran for 223550 frames Cell Events: 7872 mean_circ: 0.947296
Ran for 224050 frames Cell Events: 7892 mean_circ: 0.947303
Ran for 224550 frames Cell Events: 7913 mean_circ: 0.947286
Ran for 225050 frames Cell Events: 7931 mean_circ: 0.947297
Ran for 225550 frames Cell Events: 7961 mean_circ: 0.947323
Ran for 227050 frames Cell Events: 8037 mean_circ: 0.947321
Ran for 227550 frames Cell Events: 8058 mean_circ: 0.947331
Ran for 228050 frames Cell Events: 8078 mean_circ: 0.947371



End this measurment..



Stopping time: 1.84144e+009
****************************************
Measurement finished

Mean Circularitiy: 0.947377
Mean Area: 622.401
Mean FL-1 intensity: 3488.73
Mean FL-2 intensity: 4233.4
Mean FL-3 intensity: 0

frames processed: 226060
Total Time: 114212ms
Number of Runs (new bg img) 0
Frames collected: 228255
Skipped frames: 4384
Rescued Frames: 142511
Samples DAQ: 57063707
Samples written: 114127280
Samples per Channel: 57063640
FPS: 1998.52

Samples per second: 499630
Expected samples/s: 500000

Events: 8081
Events per second: 70.7545
jumped back (PMT): 6335
#Frames read, frequency
# 0 frames :296986
# 1 frames :143867
# 2 frames :4250
# 3 frames :1238
# 4 frames :661
# 5 frames :3416
# 6 frames :2272
# 7 frames :1288
# 8 frames :521
# 9 frames :293
# 10 frames :637
# 11 frames :288
# 12 frames :241
# 13 frames :143
# 14 frames :78
# 15 frames :66
# 16 frames :64
# 17 frames :44
# 18 frames :25
# 19 frames :22
# 20 frames :13
# 21 frames :17
# 22 frames :14
# 23 frames :6
# 24 frames :7
# 25 frames :3
# 26 frames :4
# 27 frames :2
# 28 frames :1
# 30 frames :3
# 31 frames :1
# 32 frames :1
# 34 frames :1
# 35 frames :1
# 37 frames :1
# 40 frames :1
# 53 frames :1
# 54 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.4005
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0