Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_13.23.52 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "43fbd791fb8a0d91000073ebb50f7cd9",
"name": "M1_20170605_1749_dsRNA_K8_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "11:24:17"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10000 (max 10001) in
'10000'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.7369
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.84836e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 16 mean_circ: 0.943215
Ran for 1550 frames Cell Events: 38 mean_circ: 0.950394
Ran for 2050 frames Cell Events: 52 mean_circ: 0.949975
Ran for 2550 frames Cell Events: 61 mean_circ: 0.95148
Ran for 3550 frames Cell Events: 86 mean_circ: 0.949437
Ran for 4050 frames Cell Events: 103 mean_circ: 0.947231
Ran for 4550 frames Cell Events: 118 mean_circ: 0.94431
Ran for 5550 frames Cell Events: 148 mean_circ: 0.944974
Ran for 6050 frames Cell Events: 157 mean_circ: 0.944081
Ran for 7050 frames Cell Events: 184 mean_circ: 0.940351
Ran for 7550 frames Cell Events: 196 mean_circ: 0.942082
Ran for 8050 frames Cell Events: 214 mean_circ: 0.942219
Ran for 8550 frames Cell Events: 234 mean_circ: 0.939664
Ran for 9050 frames Cell Events: 247 mean_circ: 0.939548
Ran for 10050 frames Cell Events: 286 mean_circ: 0.939454
Ran for 10550 frames Cell Events: 295 mean_circ: 0.939439
Ran for 11050 frames Cell Events: 307 mean_circ: 0.940348
Ran for 11550 frames Cell Events: 326 mean_circ: 0.940703
Ran for 12050 frames Cell Events: 339 mean_circ: 0.940836
Ran for 12550 frames Cell Events: 351 mean_circ: 0.940593
Ran for 13550 frames Cell Events: 399 mean_circ: 0.940967
Ran for 14550 frames Cell Events: 428 mean_circ: 0.940457
Ran for 16550 frames Cell Events: 490 mean_circ: 0.941335
Ran for 17050 frames Cell Events: 510 mean_circ: 0.941588
Ran for 17550 frames Cell Events: 522 mean_circ: 0.942165
Ran for 18050 frames Cell Events: 534 mean_circ: 0.942206
Ran for 18550 frames Cell Events: 557 mean_circ: 0.942013
Ran for 19050 frames Cell Events: 567 mean_circ: 0.942377
Ran for 19550 frames Cell Events: 582 mean_circ: 0.942628
Ran for 20050 frames Cell Events: 590 mean_circ: 0.942764
Ran for 21550 frames Cell Events: 636 mean_circ: 0.943196
Ran for 22050 frames Cell Events: 650 mean_circ: 0.943425
Ran for 22550 frames Cell Events: 670 mean_circ: 0.943519
Ran for 23550 frames Cell Events: 689 mean_circ: 0.943707
Ran for 24050 frames Cell Events: 705 mean_circ: 0.943787
Ran for 24550 frames Cell Events: 718 mean_circ: 0.943595
Ran for 25050 frames Cell Events: 732 mean_circ: 0.94386
Ran for 25550 frames Cell Events: 755 mean_circ: 0.944184
Ran for 26050 frames Cell Events: 765 mean_circ: 0.944333
Ran for 26550 frames Cell Events: 783 mean_circ: 0.944367
Ran for 28050 frames Cell Events: 839 mean_circ: 0.944693
Ran for 30050 frames Cell Events: 887 mean_circ: 0.944676
Ran for 30550 frames Cell Events: 901 mean_circ: 0.944962
Ran for 31050 frames Cell Events: 917 mean_circ: 0.945139
Ran for 32050 frames Cell Events: 959 mean_circ: 0.945288
Ran for 32550 frames Cell Events: 972 mean_circ: 0.945358
Ran for 35050 frames Cell Events: 1044 mean_circ: 0.944295
Ran for 36050 frames Cell Events: 1067 mean_circ: 0.944042
Ran for 37050 frames Cell Events: 1096 mean_circ: 0.943754
Ran for 38050 frames Cell Events: 1120 mean_circ: 0.943965
Ran for 38550 frames Cell Events: 1136 mean_circ: 0.944072
Ran for 39050 frames Cell Events: 1154 mean_circ: 0.944252
Ran for 39550 frames Cell Events: 1172 mean_circ: 0.944303
Ran for 40550 frames Cell Events: 1199 mean_circ: 0.944268
Ran for 41550 frames Cell Events: 1230 mean_circ: 0.944574
Ran for 42550 frames Cell Events: 1262 mean_circ: 0.944503
Ran for 43550 frames Cell Events: 1298 mean_circ: 0.944559
Ran for 44050 frames Cell Events: 1324 mean_circ: 0.94447
Ran for 44550 frames Cell Events: 1336 mean_circ: 0.944357
Ran for 45050 frames Cell Events: 1349 mean_circ: 0.944194
Ran for 46550 frames Cell Events: 1396 mean_circ: 0.944251
Ran for 47050 frames Cell Events: 1410 mean_circ: 0.944317
Ran for 47550 frames Cell Events: 1427 mean_circ: 0.94423
Ran for 48050 frames Cell Events: 1440 mean_circ: 0.944234
Ran for 48550 frames Cell Events: 1455 mean_circ: 0.944185
Ran for 49550 frames Cell Events: 1495 mean_circ: 0.944074
Ran for 50050 frames Cell Events: 1511 mean_circ: 0.94391
Ran for 52050 frames Cell Events: 1575 mean_circ: 0.944002
Ran for 52550 frames Cell Events: 1589 mean_circ: 0.944048
Ran for 53050 frames Cell Events: 1599 mean_circ: 0.94411
Ran for 54050 frames Cell Events: 1625 mean_circ: 0.944043
Ran for 55050 frames Cell Events: 1655 mean_circ: 0.943891
Ran for 55550 frames Cell Events: 1664 mean_circ: 0.943917
Ran for 56050 frames Cell Events: 1675 mean_circ: 0.943995
Ran for 56550 frames Cell Events: 1689 mean_circ: 0.943811
Ran for 57050 frames Cell Events: 1699 mean_circ: 0.943784
Ran for 57550 frames Cell Events: 1712 mean_circ: 0.943734
Ran for 59050 frames Cell Events: 1763 mean_circ: 0.943727
Ran for 60050 frames Cell Events: 1798 mean_circ: 0.943829
Ran for 61550 frames Cell Events: 1855 mean_circ: 0.943759
Ran for 62050 frames Cell Events: 1874 mean_circ: 0.943771
Ran for 63050 frames Cell Events: 1902 mean_circ: 0.943832
Ran for 63550 frames Cell Events: 1926 mean_circ: 0.943732
Ran for 64050 frames Cell Events: 1943 mean_circ: 0.943796
Ran for 65050 frames Cell Events: 1969 mean_circ: 0.943981
Ran for 65550 frames Cell Events: 1984 mean_circ: 0.944021
Ran for 66050 frames Cell Events: 1998 mean_circ: 0.943907
Ran for 66550 frames Cell Events: 2017 mean_circ: 0.943911
Ran for 67550 frames Cell Events: 2049 mean_circ: 0.943851
Ran for 68050 frames Cell Events: 2062 mean_circ: 0.943788
Ran for 68550 frames Cell Events: 2078 mean_circ: 0.943828
Ran for 69050 frames Cell Events: 2093 mean_circ: 0.943814
Ran for 69550 frames Cell Events: 2105 mean_circ: 0.943782
Ran for 74050 frames Cell Events: 2280 mean_circ: 0.943902
Ran for 74550 frames Cell Events: 2290 mean_circ: 0.943887
Ran for 75550 frames Cell Events: 2314 mean_circ: 0.943967
Ran for 76050 frames Cell Events: 2327 mean_circ: 0.943992
Ran for 76550 frames Cell Events: 2343 mean_circ: 0.943927
Ran for 77050 frames Cell Events: 2361 mean_circ: 0.944063
Ran for 79050 frames Cell Events: 2440 mean_circ: 0.944211
Ran for 80050 frames Cell Events: 2476 mean_circ: 0.944152
Ran for 80550 frames Cell Events: 2498 mean_circ: 0.944002
Ran for 81050 frames Cell Events: 2514 mean_circ: 0.944065
Ran for 81550 frames Cell Events: 2529 mean_circ: 0.944067
Ran for 82050 frames Cell Events: 2537 mean_circ: 0.944131
Ran for 82550 frames Cell Events: 2554 mean_circ: 0.94406
Ran for 83050 frames Cell Events: 2567 mean_circ: 0.944044
Ran for 83550 frames Cell Events: 2581 mean_circ: 0.943982
Ran for 85050 frames Cell Events: 2630 mean_circ: 0.944105
Ran for 85550 frames Cell Events: 2641 mean_circ: 0.944049
Ran for 86050 frames Cell Events: 2658 mean_circ: 0.94405
Ran for 86550 frames Cell Events: 2674 mean_circ: 0.944163
Ran for 87550 frames Cell Events: 2719 mean_circ: 0.944189
Ran for 88550 frames Cell Events: 2751 mean_circ: 0.944135
Ran for 90050 frames Cell Events: 2796 mean_circ: 0.943924
Ran for 90550 frames Cell Events: 2815 mean_circ: 0.943814
Ran for 91050 frames Cell Events: 2828 mean_circ: 0.943799
Ran for 91550 frames Cell Events: 2844 mean_circ: 0.94371
Ran for 92550 frames Cell Events: 2873 mean_circ: 0.943848
Ran for 93050 frames Cell Events: 2892 mean_circ: 0.943826
Ran for 93550 frames Cell Events: 2916 mean_circ: 0.943774
Ran for 94050 frames Cell Events: 2942 mean_circ: 0.943764
Ran for 94550 frames Cell Events: 2968 mean_circ: 0.943676
Ran for 95550 frames Cell Events: 3000 mean_circ: 0.943643
Ran for 96050 frames Cell Events: 3021 mean_circ: 0.943534
Ran for 96550 frames Cell Events: 3046 mean_circ: 0.943568
Ran for 97050 frames Cell Events: 3065 mean_circ: 0.943588
Ran for 97550 frames Cell Events: 3082 mean_circ: 0.943715
Ran for 99550 frames Cell Events: 3146 mean_circ: 0.943717
Ran for 100050 frames Cell Events: 3170 mean_circ: 0.943668
Ran for 101050 frames Cell Events: 3202 mean_circ: 0.943562
Ran for 101550 frames Cell Events: 3217 mean_circ: 0.943583
Ran for 102050 frames Cell Events: 3229 mean_circ: 0.943448
Ran for 102550 frames Cell Events: 3237 mean_circ: 0.94346
Ran for 103550 frames Cell Events: 3269 mean_circ: 0.943462
Ran for 104050 frames Cell Events: 3284 mean_circ: 0.943531
Ran for 105050 frames Cell Events: 3318 mean_circ: 0.943564
Ran for 105550 frames Cell Events: 3328 mean_circ: 0.943527
Ran for 106050 frames Cell Events: 3346 mean_circ: 0.943578
Ran for 107550 frames Cell Events: 3410 mean_circ: 0.943525
Ran for 108550 frames Cell Events: 3446 mean_circ: 0.943465
Ran for 109050 frames Cell Events: 3467 mean_circ: 0.943522
Ran for 109550 frames Cell Events: 3488 mean_circ: 0.943509
Ran for 110050 frames Cell Events: 3512 mean_circ: 0.943477
Ran for 110550 frames Cell Events: 3531 mean_circ: 0.943404
Ran for 111050 frames Cell Events: 3550 mean_circ: 0.943431
Ran for 111550 frames Cell Events: 3568 mean_circ: 0.943451
Ran for 112050 frames Cell Events: 3577 mean_circ: 0.943411
Ran for 112550 frames Cell Events: 3594 mean_circ: 0.943459
Ran for 113050 frames Cell Events: 3609 mean_circ: 0.943473
Ran for 113550 frames Cell Events: 3626 mean_circ: 0.943482
Ran for 114050 frames Cell Events: 3639 mean_circ: 0.943477
Ran for 114550 frames Cell Events: 3657 mean_circ: 0.943462
Ran for 115050 frames Cell Events: 3678 mean_circ: 0.943321
Ran for 115550 frames Cell Events: 3702 mean_circ: 0.943389
Ran for 116050 frames Cell Events: 3717 mean_circ: 0.94339
Ran for 116550 frames Cell Events: 3731 mean_circ: 0.943442
Ran for 117050 frames Cell Events: 3762 mean_circ: 0.94351
Ran for 118550 frames Cell Events: 3824 mean_circ: 0.943531
Ran for 119050 frames Cell Events: 3852 mean_circ: 0.943432
Ran for 119550 frames Cell Events: 3875 mean_circ: 0.943368
Ran for 120050 frames Cell Events: 3886 mean_circ: 0.943406
Ran for 120550 frames Cell Events: 3908 mean_circ: 0.94344
Ran for 121050 frames Cell Events: 3922 mean_circ: 0.943467
Ran for 121550 frames Cell Events: 3935 mean_circ: 0.943445
Ran for 122550 frames Cell Events: 3974 mean_circ: 0.943476
Ran for 123050 frames Cell Events: 3981 mean_circ: 0.943441
Ran for 123550 frames Cell Events: 3996 mean_circ: 0.943487
Ran for 125050 frames Cell Events: 4040 mean_circ: 0.943462
Ran for 125550 frames Cell Events: 4052 mean_circ: 0.943482
Ran for 127050 frames Cell Events: 4096 mean_circ: 0.943515
Ran for 128050 frames Cell Events: 4144 mean_circ: 0.94358
Ran for 129550 frames Cell Events: 4188 mean_circ: 0.943465
Ran for 130050 frames Cell Events: 4206 mean_circ: 0.943475
Ran for 130550 frames Cell Events: 4229 mean_circ: 0.943468
Ran for 131050 frames Cell Events: 4243 mean_circ: 0.943494
Ran for 131550 frames Cell Events: 4263 mean_circ: 0.943524
Ran for 132050 frames Cell Events: 4280 mean_circ: 0.943569
Ran for 132550 frames Cell Events: 4292 mean_circ: 0.943593
Ran for 133050 frames Cell Events: 4310 mean_circ: 0.943458
Ran for 133550 frames Cell Events: 4328 mean_circ: 0.943455
Ran for 134050 frames Cell Events: 4347 mean_circ: 0.943487
Ran for 134550 frames Cell Events: 4365 mean_circ: 0.943566
Ran for 135550 frames Cell Events: 4406 mean_circ: 0.943594
Ran for 136550 frames Cell Events: 4434 mean_circ: 0.943583
Ran for 139050 frames Cell Events: 4522 mean_circ: 0.943461
Ran for 139550 frames Cell Events: 4537 mean_circ: 0.943488
Ran for 140050 frames Cell Events: 4554 mean_circ: 0.94351
Ran for 140550 frames Cell Events: 4578 mean_circ: 0.943507
Ran for 141550 frames Cell Events: 4609 mean_circ: 0.943569
Ran for 142050 frames Cell Events: 4624 mean_circ: 0.943496
Ran for 142550 frames Cell Events: 4639 mean_circ: 0.943481
Ran for 143550 frames Cell Events: 4662 mean_circ: 0.943402
Ran for 145050 frames Cell Events: 4729 mean_circ: 0.943322
Ran for 147050 frames Cell Events: 4810 mean_circ: 0.943393
Ran for 147550 frames Cell Events: 4824 mean_circ: 0.9434
Ran for 148050 frames Cell Events: 4834 mean_circ: 0.943353
Ran for 148550 frames Cell Events: 4851 mean_circ: 0.943352
Ran for 149050 frames Cell Events: 4869 mean_circ: 0.943341
Ran for 149550 frames Cell Events: 4892 mean_circ: 0.943288
Ran for 151050 frames Cell Events: 4927 mean_circ: 0.943355
Ran for 151550 frames Cell Events: 4945 mean_circ: 0.943337
Ran for 153050 frames Cell Events: 5008 mean_circ: 0.943259
Ran for 153550 frames Cell Events: 5029 mean_circ: 0.943312
Ran for 155550 frames Cell Events: 5108 mean_circ: 0.943147
Ran for 156050 frames Cell Events: 5127 mean_circ: 0.943051
Ran for 156550 frames Cell Events: 5139 mean_circ: 0.943093
Ran for 157550 frames Cell Events: 5161 mean_circ: 0.943079
Ran for 158050 frames Cell Events: 5177 mean_circ: 0.943097
Ran for 159050 frames Cell Events: 5220 mean_circ: 0.943175
Ran for 159550 frames Cell Events: 5232 mean_circ: 0.943202
Ran for 160050 frames Cell Events: 5242 mean_circ: 0.943172
Ran for 160550 frames Cell Events: 5268 mean_circ: 0.94317
Ran for 161050 frames Cell Events: 5278 mean_circ: 0.943203
Ran for 161550 frames Cell Events: 5294 mean_circ: 0.943231
Ran for 162050 frames Cell Events: 5309 mean_circ: 0.943263
Ran for 162550 frames Cell Events: 5317 mean_circ: 0.943282
Ran for 163050 frames Cell Events: 5339 mean_circ: 0.943264
Ran for 163550 frames Cell Events: 5352 mean_circ: 0.94327
Ran for 164050 frames Cell Events: 5370 mean_circ: 0.943325
Ran for 164550 frames Cell Events: 5389 mean_circ: 0.943286
Ran for 167050 frames Cell Events: 5469 mean_circ: 0.943304
Ran for 167550 frames Cell Events: 5478 mean_circ: 0.943316
Ran for 168550 frames Cell Events: 5506 mean_circ: 0.943321
Ran for 169550 frames Cell Events: 5536 mean_circ: 0.943358
Ran for 170050 frames Cell Events: 5547 mean_circ: 0.94334
Ran for 170550 frames Cell Events: 5573 mean_circ: 0.94335
Ran for 171050 frames Cell Events: 5589 mean_circ: 0.943312
Ran for 171550 frames Cell Events: 5615 mean_circ: 0.943313
Ran for 172050 frames Cell Events: 5633 mean_circ: 0.943309
Ran for 172550 frames Cell Events: 5648 mean_circ: 0.943326
Ran for 173050 frames Cell Events: 5657 mean_circ: 0.943282
Ran for 173550 frames Cell Events: 5664 mean_circ: 0.943293
Ran for 174050 frames Cell Events: 5677 mean_circ: 0.94328
Ran for 174550 frames Cell Events: 5696 mean_circ: 0.94321
Ran for 175050 frames Cell Events: 5713 mean_circ: 0.94321
Ran for 175550 frames Cell Events: 5731 mean_circ: 0.943165
Ran for 176050 frames Cell Events: 5747 mean_circ: 0.943147
Ran for 176550 frames Cell Events: 5765 mean_circ: 0.94315
Ran for 177050 frames Cell Events: 5782 mean_circ: 0.943157
Ran for 178050 frames Cell Events: 5805 mean_circ: 0.943167
Ran for 178550 frames Cell Events: 5817 mean_circ: 0.943176
Ran for 179050 frames Cell Events: 5839 mean_circ: 0.94319
Ran for 179550 frames Cell Events: 5857 mean_circ: 0.943195
Ran for 180050 frames Cell Events: 5869 mean_circ: 0.943195
Ran for 180550 frames Cell Events: 5884 mean_circ: 0.943207
Ran for 181550 frames Cell Events: 5927 mean_circ: 0.943168
Ran for 183050 frames Cell Events: 5996 mean_circ: 0.943162
Ran for 183550 frames Cell Events: 6018 mean_circ: 0.943181
Ran for 184050 frames Cell Events: 6038 mean_circ: 0.943155
Ran for 185050 frames Cell Events: 6062 mean_circ: 0.943073
Ran for 185550 frames Cell Events: 6087 mean_circ: 0.943021
Ran for 186050 frames Cell Events: 6104 mean_circ: 0.943014
Ran for 186550 frames Cell Events: 6125 mean_circ: 0.943044
Ran for 187050 frames Cell Events: 6144 mean_circ: 0.94304
Ran for 187550 frames Cell Events: 6162 mean_circ: 0.943039
Ran for 189050 frames Cell Events: 6213 mean_circ: 0.943073
Ran for 189550 frames Cell Events: 6229 mean_circ: 0.943049
Ran for 190050 frames Cell Events: 6250 mean_circ: 0.943102
Ran for 191050 frames Cell Events: 6282 mean_circ: 0.943147
Ran for 192050 frames Cell Events: 6318 mean_circ: 0.943092
Ran for 192550 frames Cell Events: 6327 mean_circ: 0.943097
Ran for 193050 frames Cell Events: 6353 mean_circ: 0.943115
Ran for 194050 frames Cell Events: 6391 mean_circ: 0.943152
Ran for 194550 frames Cell Events: 6402 mean_circ: 0.94315
Ran for 195050 frames Cell Events: 6443 mean_circ: 0.943144
Ran for 196050 frames Cell Events: 6479 mean_circ: 0.943109
Ran for 196550 frames Cell Events: 6498 mean_circ: 0.94312
Ran for 197550 frames Cell Events: 6535 mean_circ: 0.943122
Ran for 198050 frames Cell Events: 6550 mean_circ: 0.943152
Ran for 199050 frames Cell Events: 6590 mean_circ: 0.943147
Ran for 199550 frames Cell Events: 6617 mean_circ: 0.943148
Ran for 200550 frames Cell Events: 6662 mean_circ: 0.943177
Ran for 201050 frames Cell Events: 6675 mean_circ: 0.943165
Ran for 202550 frames Cell Events: 6720 mean_circ: 0.943052
Ran for 203050 frames Cell Events: 6738 mean_circ: 0.943076
Ran for 204050 frames Cell Events: 6774 mean_circ: 0.94311
Ran for 204550 frames Cell Events: 6797 mean_circ: 0.94303
Ran for 205050 frames Cell Events: 6818 mean_circ: 0.943021
Ran for 205550 frames Cell Events: 6832 mean_circ: 0.943059
Ran for 206550 frames Cell Events: 6874 mean_circ: 0.94309
Ran for 207050 frames Cell Events: 6896 mean_circ: 0.943098
Ran for 207550 frames Cell Events: 6916 mean_circ: 0.943125
Ran for 209050 frames Cell Events: 6965 mean_circ: 0.943067
Ran for 210550 frames Cell Events: 7022 mean_circ: 0.943093
Ran for 211050 frames Cell Events: 7033 mean_circ: 0.94305
Ran for 211550 frames Cell Events: 7060 mean_circ: 0.943059
Ran for 212550 frames Cell Events: 7097 mean_circ: 0.943072
Ran for 214550 frames Cell Events: 7180 mean_circ: 0.943138
Ran for 215050 frames Cell Events: 7197 mean_circ: 0.943171
Ran for 215550 frames Cell Events: 7206 mean_circ: 0.943179
Ran for 216050 frames Cell Events: 7229 mean_circ: 0.943158
Ran for 216550 frames Cell Events: 7245 mean_circ: 0.943129
Ran for 217050 frames Cell Events: 7258 mean_circ: 0.943133
Ran for 217550 frames Cell Events: 7268 mean_circ: 0.943138
Ran for 219050 frames Cell Events: 7324 mean_circ: 0.943152
Ran for 219550 frames Cell Events: 7338 mean_circ: 0.943168
Ran for 220050 frames Cell Events: 7355 mean_circ: 0.943168
Ran for 220550 frames Cell Events: 7378 mean_circ: 0.943152
Ran for 221050 frames Cell Events: 7397 mean_circ: 0.943143
Ran for 221550 frames Cell Events: 7417 mean_circ: 0.943153
Ran for 223050 frames Cell Events: 7477 mean_circ: 0.943237
Ran for 223550 frames Cell Events: 7496 mean_circ: 0.943214
Ran for 224050 frames Cell Events: 7524 mean_circ: 0.943247
Ran for 224550 frames Cell Events: 7540 mean_circ: 0.943254
Ran for 225050 frames Cell Events: 7560 mean_circ: 0.943239
Ran for 225550 frames Cell Events: 7582 mean_circ: 0.943256
Ran for 226050 frames Cell Events: 7595 mean_circ: 0.943255
Ran for 228050 frames Cell Events: 7660 mean_circ: 0.943277
Ran for 228550 frames Cell Events: 7675 mean_circ: 0.943284
Ran for 229050 frames Cell Events: 7696 mean_circ: 0.943285
Ran for 229550 frames Cell Events: 7712 mean_circ: 0.943275
Ran for 230050 frames Cell Events: 7729 mean_circ: 0.943255
Ran for 231050 frames Cell Events: 7770 mean_circ: 0.943267
Ran for 231550 frames Cell Events: 7792 mean_circ: 0.943273
Ran for 233050 frames Cell Events: 7850 mean_circ: 0.943263
Ran for 233550 frames Cell Events: 7859 mean_circ: 0.943282
Ran for 234050 frames Cell Events: 7877 mean_circ: 0.943291
Ran for 235550 frames Cell Events: 7936 mean_circ: 0.943366
Ran for 236050 frames Cell Events: 7954 mean_circ: 0.943366
Ran for 236550 frames Cell Events: 7974 mean_circ: 0.943388
Ran for 237550 frames Cell Events: 8003 mean_circ: 0.943451
Ran for 238050 frames Cell Events: 8016 mean_circ: 0.943449
Ran for 239550 frames Cell Events: 8075 mean_circ: 0.943486
Ran for 240050 frames Cell Events: 8087 mean_circ: 0.943494
Ran for 240550 frames Cell Events: 8111 mean_circ: 0.943504
Ran for 241050 frames Cell Events: 8130 mean_circ: 0.943524
Ran for 241550 frames Cell Events: 8145 mean_circ: 0.94354
Ran for 243050 frames Cell Events: 8204 mean_circ: 0.943594
Ran for 243550 frames Cell Events: 8219 mean_circ: 0.943583
Ran for 245050 frames Cell Events: 8264 mean_circ: 0.943558
Ran for 245550 frames Cell Events: 8282 mean_circ: 0.943506
Ran for 246550 frames Cell Events: 8309 mean_circ: 0.943526
Ran for 247050 frames Cell Events: 8329 mean_circ: 0.94353
Ran for 248550 frames Cell Events: 8377 mean_circ: 0.943554
Ran for 250050 frames Cell Events: 8448 mean_circ: 0.943578
Ran for 250550 frames Cell Events: 8459 mean_circ: 0.943576
Ran for 251050 frames Cell Events: 8482 mean_circ: 0.943596
Ran for 251550 frames Cell Events: 8489 mean_circ: 0.943598
Ran for 252050 frames Cell Events: 8503 mean_circ: 0.943614
Ran for 252550 frames Cell Events: 8525 mean_circ: 0.943627
Ran for 253050 frames Cell Events: 8536 mean_circ: 0.943642
Ran for 253550 frames Cell Events: 8552 mean_circ: 0.943662
Ran for 254050 frames Cell Events: 8581 mean_circ: 0.943648
Ran for 254550 frames Cell Events: 8604 mean_circ: 0.943688
Ran for 255050 frames Cell Events: 8617 mean_circ: 0.943678
Ran for 255550 frames Cell Events: 8634 mean_circ: 0.943655
Ran for 256050 frames Cell Events: 8648 mean_circ: 0.943677
Ran for 258050 frames Cell Events: 8726 mean_circ: 0.943679
Ran for 258550 frames Cell Events: 8749 mean_circ: 0.943691
Ran for 259050 frames Cell Events: 8769 mean_circ: 0.94369
Ran for 259550 frames Cell Events: 8789 mean_circ: 0.94367
Ran for 260050 frames Cell Events: 8804 mean_circ: 0.943702
Ran for 260550 frames Cell Events: 8815 mean_circ: 0.943689
Ran for 261050 frames Cell Events: 8835 mean_circ: 0.943717
Ran for 261550 frames Cell Events: 8844 mean_circ: 0.943683
Ran for 263050 frames Cell Events: 8902 mean_circ: 0.943672
Ran for 263550 frames Cell Events: 8920 mean_circ: 0.943668
Ran for 264050 frames Cell Events: 8933 mean_circ: 0.943649
Ran for 265050 frames Cell Events: 8962 mean_circ: 0.943661
Ran for 265550 frames Cell Events: 8976 mean_circ: 0.943673
Ran for 266050 frames Cell Events: 9006 mean_circ: 0.943704
Ran for 266550 frames Cell Events: 9032 mean_circ: 0.943727
Ran for 268050 frames Cell Events: 9088 mean_circ: 0.943715
Ran for 269050 frames Cell Events: 9135 mean_circ: 0.9437
Ran for 269550 frames Cell Events: 9156 mean_circ: 0.943736
Ran for 270050 frames Cell Events: 9171 mean_circ: 0.943738
Ran for 272550 frames Cell Events: 9273 mean_circ: 0.943742
Ran for 273050 frames Cell Events: 9287 mean_circ: 0.943723
Ran for 274550 frames Cell Events: 9334 mean_circ: 0.943705
Ran for 275050 frames Cell Events: 9351 mean_circ: 0.943734
Ran for 275550 frames Cell Events: 9364 mean_circ: 0.94374
Ran for 276050 frames Cell Events: 9392 mean_circ: 0.943718
Ran for 276550 frames Cell Events: 9409 mean_circ: 0.943722
Ran for 277050 frames Cell Events: 9423 mean_circ: 0.943743
Ran for 277550 frames Cell Events: 9446 mean_circ: 0.943748
Ran for 279050 frames Cell Events: 9509 mean_circ: 0.943798
Ran for 279550 frames Cell Events: 9532 mean_circ: 0.943798
Ran for 281050 frames Cell Events: 9598 mean_circ: 0.943866
Ran for 281550 frames Cell Events: 9610 mean_circ: 0.943854
Ran for 282050 frames Cell Events: 9636 mean_circ: 0.943812
Ran for 282550 frames Cell Events: 9653 mean_circ: 0.943813
Ran for 283550 frames Cell Events: 9691 mean_circ: 0.943783
Ran for 284550 frames Cell Events: 9728 mean_circ: 0.943799
Ran for 285050 frames Cell Events: 9742 mean_circ: 0.943759
Ran for 285550 frames Cell Events: 9761 mean_circ: 0.943762
Ran for 286050 frames Cell Events: 9786 mean_circ: 0.943788
Ran for 286550 frames Cell Events: 9813 mean_circ: 0.943802
Ran for 287550 frames Cell Events: 9851 mean_circ: 0.943857
Ran for 288050 frames Cell Events: 9881 mean_circ: 0.943841
Ran for 288550 frames Cell Events: 9895 mean_circ: 0.943828
Ran for 289050 frames Cell Events: 9909 mean_circ: 0.943823
Ran for 289550 frames Cell Events: 9926 mean_circ: 0.943837
Ran for 290050 frames Cell Events: 9939 mean_circ: 0.943848
Ran for 291050 frames Cell Events: 9982 mean_circ: 0.943865
Ran for 291550 frames Cell Events: 9997 mean_circ: 0.94387



End this measurment.
because stop condition (time/nr of cells) was met

Stopping time: 1.84851e+009
****************************************
Measurement finished

Mean Circularitiy: 0.943876
Mean Area: 582.406
Mean FL-1 intensity: 3910.36
Mean FL-2 intensity: 4816.06
Mean FL-3 intensity: 0

frames processed: 291478
Total Time: 145891ms
Number of Runs (new bg img) 0
Frames collected: 291602
Skipped frames: 32355
Rescued Frames: 1701623
Samples DAQ: 72900692
Samples written: 145800716
Samples per Channel: 72900358
FPS: 1998.76

Samples per second: 499689
Expected samples/s: 500000

Events: 10001
Events per second: 68.551
jumped back (PMT): 5412
#Frames read, frequency
# 0 frames :415037
# 1 frames :146124
# 2 frames :5915
# 3 frames :2315
# 4 frames :1357
# 5 frames :1374
# 6 frames :2541
# 7 frames :1754
# 8 frames :1048
# 9 frames :650
# 10 frames :784
# 11 frames :754
# 12 frames :665
# 13 frames :522
# 14 frames :408
# 15 frames :307
# 16 frames :248
# 17 frames :251
# 18 frames :223
# 19 frames :181
# 20 frames :110
# 21 frames :94
# 22 frames :65
# 23 frames :52
# 24 frames :39
# 25 frames :44
# 26 frames :26
# 27 frames :25
# 28 frames :31
# 29 frames :31
# 30 frames :21
# 31 frames :18
# 32 frames :22
# 33 frames :3
# 34 frames :12
# 35 frames :5
# 36 frames :6
# 37 frames :2
# 38 frames :3
# 39 frames :1
# 40 frames :1
# 41 frames :4
# 42 frames :2
# 43 frames :2
# 44 frames :2
# 46 frames :3
# 47 frames :1
# 55 frames :1
# 69 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.7369
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0