Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_15.04.10 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "5d109fb5461a671da780bf015e0f1ae8",
"name": "M1_20170609_1422_dsRNA_Y3_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "13:04:34"
}
}
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.2934
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.18154e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.934712
Ran for 1050 frames Cell Events: 31 mean_circ: 0.923773
Ran for 1550 frames Cell Events: 42 mean_circ: 0.923285
Ran for 2550 frames Cell Events: 84 mean_circ: 0.934382
Ran for 3050 frames Cell Events: 108 mean_circ: 0.936688
Ran for 3550 frames Cell Events: 123 mean_circ: 0.939324
Ran for 4550 frames Cell Events: 170 mean_circ: 0.940212
Ran for 5050 frames Cell Events: 189 mean_circ: 0.938565
Ran for 6550 frames Cell Events: 235 mean_circ: 0.935889
Ran for 8050 frames Cell Events: 296 mean_circ: 0.93474
Ran for 9050 frames Cell Events: 333 mean_circ: 0.935732
Ran for 9550 frames Cell Events: 366 mean_circ: 0.935768
Ran for 10550 frames Cell Events: 411 mean_circ: 0.936792
Ran for 11550 frames Cell Events: 453 mean_circ: 0.93707
Ran for 12550 frames Cell Events: 482 mean_circ: 0.937588
Ran for 13550 frames Cell Events: 511 mean_circ: 0.938187
Ran for 14550 frames Cell Events: 547 mean_circ: 0.938259
Ran for 15050 frames Cell Events: 568 mean_circ: 0.937997
Ran for 16550 frames Cell Events: 609 mean_circ: 0.93841
Ran for 17050 frames Cell Events: 622 mean_circ: 0.938086
Ran for 17550 frames Cell Events: 635 mean_circ: 0.938046
Ran for 18050 frames Cell Events: 656 mean_circ: 0.938046
Ran for 18550 frames Cell Events: 681 mean_circ: 0.938029
Ran for 19550 frames Cell Events: 725 mean_circ: 0.937348
Ran for 20050 frames Cell Events: 734 mean_circ: 0.937384
Ran for 20550 frames Cell Events: 751 mean_circ: 0.937018
Ran for 23550 frames Cell Events: 843 mean_circ: 0.937571
Ran for 24050 frames Cell Events: 856 mean_circ: 0.93701
Ran for 24550 frames Cell Events: 872 mean_circ: 0.936946
Ran for 25050 frames Cell Events: 884 mean_circ: 0.936886
Ran for 25550 frames Cell Events: 894 mean_circ: 0.936966
Ran for 26550 frames Cell Events: 922 mean_circ: 0.937184
Ran for 27050 frames Cell Events: 945 mean_circ: 0.93717
Ran for 27550 frames Cell Events: 965 mean_circ: 0.936885
Ran for 28050 frames Cell Events: 985 mean_circ: 0.936873
Ran for 28550 frames Cell Events: 1001 mean_circ: 0.936996
Ran for 29050 frames Cell Events: 1015 mean_circ: 0.937022
Ran for 29550 frames Cell Events: 1028 mean_circ: 0.937051
Ran for 31550 frames Cell Events: 1112 mean_circ: 0.93761
Ran for 32050 frames Cell Events: 1121 mean_circ: 0.937311
Ran for 33050 frames Cell Events: 1150 mean_circ: 0.937157
Ran for 34050 frames Cell Events: 1179 mean_circ: 0.937493
Ran for 37050 frames Cell Events: 1277 mean_circ: 0.937172
Ran for 37550 frames Cell Events: 1295 mean_circ: 0.937074
Ran for 38550 frames Cell Events: 1327 mean_circ: 0.937365
Ran for 39050 frames Cell Events: 1334 mean_circ: 0.937512
Ran for 39550 frames Cell Events: 1346 mean_circ: 0.937458
Ran for 43550 frames Cell Events: 1470 mean_circ: 0.937036
Ran for 44050 frames Cell Events: 1485 mean_circ: 0.937169
Ran for 45050 frames Cell Events: 1515 mean_circ: 0.937429
Ran for 45550 frames Cell Events: 1530 mean_circ: 0.937413
Ran for 46050 frames Cell Events: 1554 mean_circ: 0.937248
Ran for 47050 frames Cell Events: 1589 mean_circ: 0.937241
Ran for 47550 frames Cell Events: 1605 mean_circ: 0.937238
Ran for 48050 frames Cell Events: 1622 mean_circ: 0.936976
Ran for 48550 frames Cell Events: 1642 mean_circ: 0.936886
Ran for 49550 frames Cell Events: 1681 mean_circ: 0.936724
Ran for 52550 frames Cell Events: 1788 mean_circ: 0.936222
Ran for 53050 frames Cell Events: 1799 mean_circ: 0.936222
Ran for 53550 frames Cell Events: 1816 mean_circ: 0.93616
Ran for 54550 frames Cell Events: 1849 mean_circ: 0.936362
Ran for 55050 frames Cell Events: 1863 mean_circ: 0.936582
Ran for 56550 frames Cell Events: 1901 mean_circ: 0.936419
Ran for 58550 frames Cell Events: 1970 mean_circ: 0.936651
Ran for 59050 frames Cell Events: 1995 mean_circ: 0.936831
Ran for 59550 frames Cell Events: 2007 mean_circ: 0.936949
Ran for 60050 frames Cell Events: 2018 mean_circ: 0.93698
Ran for 60550 frames Cell Events: 2033 mean_circ: 0.936989
Ran for 61550 frames Cell Events: 2075 mean_circ: 0.937147
Ran for 62050 frames Cell Events: 2100 mean_circ: 0.937045
Ran for 62550 frames Cell Events: 2119 mean_circ: 0.937144
Ran for 63050 frames Cell Events: 2133 mean_circ: 0.937124
Ran for 63550 frames Cell Events: 2150 mean_circ: 0.937114
Ran for 64550 frames Cell Events: 2186 mean_circ: 0.937108
Ran for 65050 frames Cell Events: 2197 mean_circ: 0.936984
Ran for 65550 frames Cell Events: 2213 mean_circ: 0.937029
Ran for 66050 frames Cell Events: 2235 mean_circ: 0.937043
Ran for 66550 frames Cell Events: 2255 mean_circ: 0.937081
Ran for 67550 frames Cell Events: 2298 mean_circ: 0.937235
Ran for 68050 frames Cell Events: 2313 mean_circ: 0.937219
Ran for 68550 frames Cell Events: 2332 mean_circ: 0.937333
Ran for 69050 frames Cell Events: 2352 mean_circ: 0.937221
Ran for 69550 frames Cell Events: 2364 mean_circ: 0.937214
Ran for 70050 frames Cell Events: 2378 mean_circ: 0.937236
Ran for 71550 frames Cell Events: 2418 mean_circ: 0.937428
Ran for 72050 frames Cell Events: 2433 mean_circ: 0.937401
Ran for 73050 frames Cell Events: 2462 mean_circ: 0.937323
Ran for 73550 frames Cell Events: 2479 mean_circ: 0.937139
Ran for 74050 frames Cell Events: 2489 mean_circ: 0.937198
Ran for 75050 frames Cell Events: 2514 mean_circ: 0.937174
Ran for 76550 frames Cell Events: 2563 mean_circ: 0.937046
Ran for 78550 frames Cell Events: 2644 mean_circ: 0.937006
Ran for 79550 frames Cell Events: 2677 mean_circ: 0.936936
Ran for 81050 frames Cell Events: 2744 mean_circ: 0.937012
Ran for 81550 frames Cell Events: 2758 mean_circ: 0.937023
Ran for 83050 frames Cell Events: 2797 mean_circ: 0.937098
Ran for 83550 frames Cell Events: 2810 mean_circ: 0.937128
Ran for 84050 frames Cell Events: 2831 mean_circ: 0.937008
Ran for 85550 frames Cell Events: 2884 mean_circ: 0.937022
Ran for 86050 frames Cell Events: 2903 mean_circ: 0.937019
Ran for 87550 frames Cell Events: 2937 mean_circ: 0.937058
Ran for 88050 frames Cell Events: 2943 mean_circ: 0.937004
Ran for 88550 frames Cell Events: 2949 mean_circ: 0.937031
Ran for 89550 frames Cell Events: 2984 mean_circ: 0.937134
Ran for 90050 frames Cell Events: 2998 mean_circ: 0.937136
Ran for 90550 frames Cell Events: 3022 mean_circ: 0.937152
Ran for 91050 frames Cell Events: 3043 mean_circ: 0.937238
Ran for 91550 frames Cell Events: 3066 mean_circ: 0.937214
Ran for 93550 frames Cell Events: 3138 mean_circ: 0.937058
Ran for 94050 frames Cell Events: 3153 mean_circ: 0.936966
Ran for 94550 frames Cell Events: 3167 mean_circ: 0.936947
Ran for 96050 frames Cell Events: 3216 mean_circ: 0.937042
Ran for 97550 frames Cell Events: 3276 mean_circ: 0.937114
Ran for 98050 frames Cell Events: 3289 mean_circ: 0.937127
Ran for 99050 frames Cell Events: 3315 mean_circ: 0.937172
Ran for 99550 frames Cell Events: 3333 mean_circ: 0.937074
Ran for 100050 frames Cell Events: 3348 mean_circ: 0.937072
Ran for 100550 frames Cell Events: 3358 mean_circ: 0.937054
Ran for 101550 frames Cell Events: 3389 mean_circ: 0.937069
Ran for 102050 frames Cell Events: 3402 mean_circ: 0.937106
Ran for 103050 frames Cell Events: 3442 mean_circ: 0.93714
Ran for 103550 frames Cell Events: 3458 mean_circ: 0.937165
Ran for 106050 frames Cell Events: 3543 mean_circ: 0.937152
Ran for 106550 frames Cell Events: 3561 mean_circ: 0.937123
Ran for 107550 frames Cell Events: 3588 mean_circ: 0.937144
Ran for 108050 frames Cell Events: 3610 mean_circ: 0.937144
Ran for 108550 frames Cell Events: 3625 mean_circ: 0.93721
Ran for 111050 frames Cell Events: 3722 mean_circ: 0.937042
Ran for 111550 frames Cell Events: 3731 mean_circ: 0.937112
Ran for 112050 frames Cell Events: 3748 mean_circ: 0.937145
Ran for 112550 frames Cell Events: 3758 mean_circ: 0.937147
Ran for 115050 frames Cell Events: 3835 mean_circ: 0.93718
Ran for 115550 frames Cell Events: 3855 mean_circ: 0.937186
Ran for 116050 frames Cell Events: 3870 mean_circ: 0.937163
Ran for 116550 frames Cell Events: 3881 mean_circ: 0.937182
Ran for 117550 frames Cell Events: 3913 mean_circ: 0.937225
Ran for 122050 frames Cell Events: 4112 mean_circ: 0.937349
Ran for 122550 frames Cell Events: 4148 mean_circ: 0.937349
Ran for 124050 frames Cell Events: 4215 mean_circ: 0.937151
Ran for 124550 frames Cell Events: 4236 mean_circ: 0.937193
Ran for 125550 frames Cell Events: 4283 mean_circ: 0.937124
Ran for 127050 frames Cell Events: 4337 mean_circ: 0.93713
Ran for 127550 frames Cell Events: 4356 mean_circ: 0.937121
Ran for 129550 frames Cell Events: 4429 mean_circ: 0.93704
Ran for 130050 frames Cell Events: 4446 mean_circ: 0.937075
Ran for 131050 frames Cell Events: 4472 mean_circ: 0.937097
Ran for 131550 frames Cell Events: 4484 mean_circ: 0.937078
Ran for 132050 frames Cell Events: 4501 mean_circ: 0.937097
Ran for 132550 frames Cell Events: 4518 mean_circ: 0.937067
Ran for 133550 frames Cell Events: 4544 mean_circ: 0.93714
Ran for 134550 frames Cell Events: 4571 mean_circ: 0.937172
Ran for 135050 frames Cell Events: 4583 mean_circ: 0.937184
Ran for 135550 frames Cell Events: 4597 mean_circ: 0.937222
Ran for 136050 frames Cell Events: 4605 mean_circ: 0.937206
Ran for 136550 frames Cell Events: 4621 mean_circ: 0.937183
Ran for 137550 frames Cell Events: 4648 mean_circ: 0.937134
Ran for 138050 frames Cell Events: 4659 mean_circ: 0.937143
Ran for 138550 frames Cell Events: 4671 mean_circ: 0.937134
Ran for 139050 frames Cell Events: 4688 mean_circ: 0.937189
Ran for 140550 frames Cell Events: 4727 mean_circ: 0.937146
Ran for 141050 frames Cell Events: 4741 mean_circ: 0.937127
Ran for 141550 frames Cell Events: 4763 mean_circ: 0.937099
Ran for 142550 frames Cell Events: 4784 mean_circ: 0.937115
Ran for 143050 frames Cell Events: 4797 mean_circ: 0.937085
Ran for 143550 frames Cell Events: 4811 mean_circ: 0.937049
Ran for 144550 frames Cell Events: 4832 mean_circ: 0.937037
Ran for 145550 frames Cell Events: 4872 mean_circ: 0.937098
Ran for 146050 frames Cell Events: 4891 mean_circ: 0.937104
Ran for 146550 frames Cell Events: 4903 mean_circ: 0.937087
Ran for 147050 frames Cell Events: 4920 mean_circ: 0.937093
Ran for 148050 frames Cell Events: 4964 mean_circ: 0.937057
Ran for 148550 frames Cell Events: 4982 mean_circ: 0.937024
Ran for 149050 frames Cell Events: 5002 mean_circ: 0.937028
Ran for 150050 frames Cell Events: 5041 mean_circ: 0.937032
Ran for 150550 frames Cell Events: 5059 mean_circ: 0.936959
Ran for 151550 frames Cell Events: 5085 mean_circ: 0.936998
Ran for 152050 frames Cell Events: 5100 mean_circ: 0.937013
Ran for 152550 frames Cell Events: 5120 mean_circ: 0.937047
Ran for 153050 frames Cell Events: 5129 mean_circ: 0.937028
Ran for 154050 frames Cell Events: 5175 mean_circ: 0.937112
Ran for 155050 frames Cell Events: 5219 mean_circ: 0.937041
Ran for 155550 frames Cell Events: 5232 mean_circ: 0.937014
Ran for 156550 frames Cell Events: 5257 mean_circ: 0.937018
Ran for 157050 frames Cell Events: 5267 mean_circ: 0.937058
Ran for 157550 frames Cell Events: 5289 mean_circ: 0.937092
Ran for 159050 frames Cell Events: 5358 mean_circ: 0.937024
Ran for 159550 frames Cell Events: 5376 mean_circ: 0.937024
Ran for 160550 frames Cell Events: 5413 mean_circ: 0.93703
Ran for 161050 frames Cell Events: 5426 mean_circ: 0.937049
Ran for 162550 frames Cell Events: 5473 mean_circ: 0.937113
Ran for 163050 frames Cell Events: 5490 mean_circ: 0.937025
Ran for 164050 frames Cell Events: 5524 mean_circ: 0.937102
Ran for 165050 frames Cell Events: 5568 mean_circ: 0.937075
Ran for 170050 frames Cell Events: 5775 mean_circ: 0.937053
Ran for 172050 frames Cell Events: 5842 mean_circ: 0.937078
Ran for 173550 frames Cell Events: 5896 mean_circ: 0.937118
Ran for 174050 frames Cell Events: 5922 mean_circ: 0.937109
Ran for 175050 frames Cell Events: 5959 mean_circ: 0.937163
Ran for 176050 frames Cell Events: 6000 mean_circ: 0.937075
Ran for 176550 frames Cell Events: 6022 mean_circ: 0.937001
Ran for 177550 frames Cell Events: 6070 mean_circ: 0.937057
Ran for 178050 frames Cell Events: 6088 mean_circ: 0.93703
Ran for 179050 frames Cell Events: 6125 mean_circ: 0.936984
Ran for 180550 frames Cell Events: 6192 mean_circ: 0.93703
Ran for 181050 frames Cell Events: 6214 mean_circ: 0.937059
Ran for 182050 frames Cell Events: 6241 mean_circ: 0.937061
Ran for 183050 frames Cell Events: 6275 mean_circ: 0.93703
Ran for 183550 frames Cell Events: 6287 mean_circ: 0.937035
Ran for 184050 frames Cell Events: 6302 mean_circ: 0.937093
Ran for 184550 frames Cell Events: 6320 mean_circ: 0.93709
Ran for 185550 frames Cell Events: 6361 mean_circ: 0.937057
Ran for 186050 frames Cell Events: 6384 mean_circ: 0.937025
Ran for 186550 frames Cell Events: 6399 mean_circ: 0.937051
Ran for 187050 frames Cell Events: 6408 mean_circ: 0.937034
Ran for 188050 frames Cell Events: 6451 mean_circ: 0.937003
Ran for 188550 frames Cell Events: 6468 mean_circ: 0.937031
Ran for 189050 frames Cell Events: 6491 mean_circ: 0.937026
Ran for 190050 frames Cell Events: 6532 mean_circ: 0.937041
Ran for 190550 frames Cell Events: 6552 mean_circ: 0.936997
Ran for 191050 frames Cell Events: 6565 mean_circ: 0.93699
Ran for 191550 frames Cell Events: 6575 mean_circ: 0.936993
Ran for 192050 frames Cell Events: 6586 mean_circ: 0.937006
Ran for 193050 frames Cell Events: 6612 mean_circ: 0.937019
Ran for 193550 frames Cell Events: 6629 mean_circ: 0.936985
Ran for 194550 frames Cell Events: 6671 mean_circ: 0.937055
Ran for 195050 frames Cell Events: 6687 mean_circ: 0.937079
Ran for 195550 frames Cell Events: 6709 mean_circ: 0.937113
Ran for 196050 frames Cell Events: 6719 mean_circ: 0.937105
Ran for 196550 frames Cell Events: 6732 mean_circ: 0.937102
Ran for 198050 frames Cell Events: 6790 mean_circ: 0.937128
Ran for 198550 frames Cell Events: 6809 mean_circ: 0.937123
Ran for 199050 frames Cell Events: 6827 mean_circ: 0.937053
Ran for 199550 frames Cell Events: 6849 mean_circ: 0.937032
Ran for 200050 frames Cell Events: 6865 mean_circ: 0.937059
Ran for 201050 frames Cell Events: 6916 mean_circ: 0.937065
Ran for 201550 frames Cell Events: 6945 mean_circ: 0.93706
Ran for 202050 frames Cell Events: 6958 mean_circ: 0.937057
Ran for 202550 frames Cell Events: 6979 mean_circ: 0.937093
Ran for 204050 frames Cell Events: 7026 mean_circ: 0.937092
Ran for 204550 frames Cell Events: 7037 mean_circ: 0.937065
Ran for 206050 frames Cell Events: 7096 mean_circ: 0.936985
Ran for 209050 frames Cell Events: 7218 mean_circ: 0.93698
Ran for 209550 frames Cell Events: 7247 mean_circ: 0.93698
Ran for 210550 frames Cell Events: 7284 mean_circ: 0.936933
Ran for 211050 frames Cell Events: 7304 mean_circ: 0.936897
Ran for 212050 frames Cell Events: 7335 mean_circ: 0.936897
Ran for 212550 frames Cell Events: 7356 mean_circ: 0.936908
Ran for 213050 frames Cell Events: 7378 mean_circ: 0.936877
Ran for 214550 frames Cell Events: 7445 mean_circ: 0.93679
Ran for 215550 frames Cell Events: 7476 mean_circ: 0.936798
Ran for 216050 frames Cell Events: 7496 mean_circ: 0.936788
Ran for 217550 frames Cell Events: 7558 mean_circ: 0.936783
Ran for 218050 frames Cell Events: 7582 mean_circ: 0.936727
Ran for 218550 frames Cell Events: 7600 mean_circ: 0.936719
Ran for 219550 frames Cell Events: 7639 mean_circ: 0.936707
Ran for 220550 frames Cell Events: 7679 mean_circ: 0.936617
Ran for 221050 frames Cell Events: 7692 mean_circ: 0.936633
Ran for 221550 frames Cell Events: 7711 mean_circ: 0.936658
Ran for 222050 frames Cell Events: 7733 mean_circ: 0.936684
Ran for 222550 frames Cell Events: 7750 mean_circ: 0.936687
Ran for 223050 frames Cell Events: 7766 mean_circ: 0.936654
Ran for 223550 frames Cell Events: 7780 mean_circ: 0.936662
Ran for 224050 frames Cell Events: 7798 mean_circ: 0.936652
Ran for 225050 frames Cell Events: 7831 mean_circ: 0.936621
Ran for 225550 frames Cell Events: 7851 mean_circ: 0.936583
Ran for 226050 frames Cell Events: 7878 mean_circ: 0.936585
Ran for 226550 frames Cell Events: 7901 mean_circ: 0.936601
Ran for 228050 frames Cell Events: 7960 mean_circ: 0.936595
Ran for 230050 frames Cell Events: 8025 mean_circ: 0.936476
Ran for 231050 frames Cell Events: 8069 mean_circ: 0.936469
Ran for 231550 frames Cell Events: 8091 mean_circ: 0.936493
Ran for 232550 frames Cell Events: 8128 mean_circ: 0.936518
Ran for 233050 frames Cell Events: 8138 mean_circ: 0.936516
Ran for 233550 frames Cell Events: 8151 mean_circ: 0.936524
Ran for 234050 frames Cell Events: 8166 mean_circ: 0.936564
Ran for 234550 frames Cell Events: 8179 mean_circ: 0.936547
Ran for 237050 frames Cell Events: 8251 mean_circ: 0.936538
Ran for 237550 frames Cell Events: 8270 mean_circ: 0.936533
Ran for 241050 frames Cell Events: 8411 mean_circ: 0.936439
Ran for 241550 frames Cell Events: 8438 mean_circ: 0.936442
Ran for 242050 frames Cell Events: 8457 mean_circ: 0.93632
Ran for 242550 frames Cell Events: 8475 mean_circ: 0.936272
Ran for 244050 frames Cell Events: 8524 mean_circ: 0.936311
Ran for 244550 frames Cell Events: 8535 mean_circ: 0.936324
Ran for 245050 frames Cell Events: 8543 mean_circ: 0.936343
Ran for 246050 frames Cell Events: 8580 mean_circ: 0.936331
Ran for 246550 frames Cell Events: 8599 mean_circ: 0.93632
Ran for 248050 frames Cell Events: 8664 mean_circ: 0.936348
Ran for 248550 frames Cell Events: 8693 mean_circ: 0.936379
Ran for 249550 frames Cell Events: 8721 mean_circ: 0.936396
Ran for 250050 frames Cell Events: 8741 mean_circ: 0.936393
Ran for 250550 frames Cell Events: 8763 mean_circ: 0.936412
Ran for 251050 frames Cell Events: 8791 mean_circ: 0.936401
Ran for 251550 frames Cell Events: 8809 mean_circ: 0.936418
Ran for 253050 frames Cell Events: 8853 mean_circ: 0.936394
Ran for 253550 frames Cell Events: 8876 mean_circ: 0.936372
Ran for 255050 frames Cell Events: 8927 mean_circ: 0.936277
Ran for 255550 frames Cell Events: 8946 mean_circ: 0.936262
Ran for 256050 frames Cell Events: 8956 mean_circ: 0.936261
Ran for 256550 frames Cell Events: 8971 mean_circ: 0.93626
Ran for 257050 frames Cell Events: 8987 mean_circ: 0.936242
Ran for 260050 frames Cell Events: 9102 mean_circ: 0.936299
Ran for 260550 frames Cell Events: 9117 mean_circ: 0.936295
Ran for 261050 frames Cell Events: 9135 mean_circ: 0.936303
Ran for 262550 frames Cell Events: 9190 mean_circ: 0.936234
Ran for 263050 frames Cell Events: 9206 mean_circ: 0.936245
Ran for 263550 frames Cell Events: 9229 mean_circ: 0.936237
Ran for 264050 frames Cell Events: 9246 mean_circ: 0.936232
Ran for 264550 frames Cell Events: 9261 mean_circ: 0.936234
Ran for 265050 frames Cell Events: 9274 mean_circ: 0.936252
Ran for 266050 frames Cell Events: 9317 mean_circ: 0.936207
Ran for 266550 frames Cell Events: 9334 mean_circ: 0.936221
Ran for 267050 frames Cell Events: 9348 mean_circ: 0.936198
Ran for 268550 frames Cell Events: 9401 mean_circ: 0.936206
Ran for 269550 frames Cell Events: 9428 mean_circ: 0.936234
Ran for 271550 frames Cell Events: 9521 mean_circ: 0.936105
Ran for 272550 frames Cell Events: 9570 mean_circ: 0.936111
Ran for 273050 frames Cell Events: 9590 mean_circ: 0.936133
Ran for 273550 frames Cell Events: 9606 mean_circ: 0.936161
Ran for 274550 frames Cell Events: 9640 mean_circ: 0.936192
Ran for 275050 frames Cell Events: 9655 mean_circ: 0.936152
Ran for 275550 frames Cell Events: 9668 mean_circ: 0.936178
Ran for 277050 frames Cell Events: 9728 mean_circ: 0.936151
Ran for 277550 frames Cell Events: 9741 mean_circ: 0.93615
Ran for 278550 frames Cell Events: 9773 mean_circ: 0.936161
Ran for 279050 frames Cell Events: 9786 mean_circ: 0.936171
Ran for 281050 frames Cell Events: 9846 mean_circ: 0.936143
Ran for 283550 frames Cell Events: 9927 mean_circ: 0.936048
Ran for 284050 frames Cell Events: 9944 mean_circ: 0.936051
Ran for 284550 frames Cell Events: 9963 mean_circ: 0.936035
Ran for 285550 frames Cell Events: 9994 mean_circ: 0.93598



End this measurment.
because stop condition (time/nr of cells) was met

Stopping time: 2.18168e+009
****************************************
Measurement finished

Mean Circularitiy: 0.935967
Mean Area: 684.469
Mean FL-1 intensity: 3412.53
Mean FL-2 intensity: 4323.3
Mean FL-3 intensity: 0

frames processed: 283203
Total Time: 142875ms
Number of Runs (new bg img) 0
Frames collected: 285625
Skipped frames: 30369
Rescued Frames: 2713874
Samples DAQ: 71409547
Samples written: 142812536
Samples per Channel: 71406268
FPS: 1999.12

Samples per second: 499781
Expected samples/s: 500000

Events: 10002
Events per second: 70.0051
jumped back (PMT): 6148
#Frames read, frequency
# 0 frames :432119
# 1 frames :116314
# 2 frames :6047
# 3 frames :2578
# 4 frames :1357
# 5 frames :975
# 6 frames :913
# 7 frames :2183
# 8 frames :1343
# 9 frames :1046
# 10 frames :1186
# 11 frames :888
# 12 frames :753
# 13 frames :478
# 14 frames :341
# 15 frames :316
# 16 frames :284
# 17 frames :273
# 18 frames :223
# 19 frames :225
# 20 frames :174
# 21 frames :151
# 22 frames :123
# 23 frames :95
# 24 frames :92
# 25 frames :66
# 26 frames :44
# 27 frames :65
# 28 frames :34
# 29 frames :50
# 30 frames :35
# 31 frames :27
# 32 frames :25
# 33 frames :32
# 34 frames :23
# 35 frames :25
# 36 frames :19
# 37 frames :13
# 38 frames :14
# 39 frames :11
# 40 frames :11
# 41 frames :10
# 42 frames :5
# 43 frames :9
# 44 frames :8
# 45 frames :6
# 46 frames :4
# 47 frames :8
# 48 frames :12
# 49 frames :7
# 50 frames :4
# 51 frames :4
# 52 frames :5
# 53 frames :2
# 54 frames :4
# 55 frames :2
# 56 frames :3
# 57 frames :2
# 58 frames :2
# 59 frames :1
# 61 frames :2
# 62 frames :2
# 63 frames :3
# 65 frames :1
# 66 frames :3
# 68 frames :2
# 72 frames :1
# 80 frames :1
# 83 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.2934
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0