Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_15.09.49 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "502a3950b2483e8fe1c9a6be941e5988",
"name": "M1_20170609_1549_dsRNA_V5_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "13:10:09"
}
}
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.7927
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.18679e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.911116
Ran for 550 frames Cell Events: 18 mean_circ: 0.933344
Ran for 1050 frames Cell Events: 31 mean_circ: 0.941505
Ran for 1550 frames Cell Events: 43 mean_circ: 0.934512
Ran for 2050 frames Cell Events: 57 mean_circ: 0.937875
Ran for 2550 frames Cell Events: 66 mean_circ: 0.939301
Ran for 3050 frames Cell Events: 74 mean_circ: 0.940035
Ran for 4050 frames Cell Events: 101 mean_circ: 0.943481
Ran for 4550 frames Cell Events: 114 mean_circ: 0.942612
Ran for 5550 frames Cell Events: 144 mean_circ: 0.942653
Ran for 6050 frames Cell Events: 157 mean_circ: 0.94293
Ran for 6550 frames Cell Events: 172 mean_circ: 0.942189
Ran for 7050 frames Cell Events: 183 mean_circ: 0.942052
Ran for 7550 frames Cell Events: 199 mean_circ: 0.942204
Ran for 9050 frames Cell Events: 230 mean_circ: 0.941023
Ran for 9550 frames Cell Events: 240 mean_circ: 0.941234
Ran for 10550 frames Cell Events: 266 mean_circ: 0.94208
Ran for 12050 frames Cell Events: 309 mean_circ: 0.940617
Ran for 12550 frames Cell Events: 325 mean_circ: 0.940165
Ran for 13050 frames Cell Events: 337 mean_circ: 0.939189
Ran for 13550 frames Cell Events: 351 mean_circ: 0.939609
Ran for 14050 frames Cell Events: 359 mean_circ: 0.939844
Ran for 15050 frames Cell Events: 388 mean_circ: 0.940547
Ran for 16550 frames Cell Events: 434 mean_circ: 0.941203
Ran for 17050 frames Cell Events: 450 mean_circ: 0.941339
Ran for 17550 frames Cell Events: 462 mean_circ: 0.94115
Ran for 18050 frames Cell Events: 472 mean_circ: 0.941463
Ran for 18550 frames Cell Events: 481 mean_circ: 0.940739
Ran for 19050 frames Cell Events: 493 mean_circ: 0.940024
Ran for 19550 frames Cell Events: 503 mean_circ: 0.939911
Ran for 20050 frames Cell Events: 512 mean_circ: 0.940353
Ran for 20550 frames Cell Events: 527 mean_circ: 0.940649
Ran for 21050 frames Cell Events: 533 mean_circ: 0.940775
Ran for 21550 frames Cell Events: 543 mean_circ: 0.940632
Ran for 22050 frames Cell Events: 551 mean_circ: 0.940437
Ran for 23550 frames Cell Events: 592 mean_circ: 0.940426
Ran for 24050 frames Cell Events: 605 mean_circ: 0.940742
Ran for 25050 frames Cell Events: 628 mean_circ: 0.940394
Ran for 25550 frames Cell Events: 635 mean_circ: 0.940484
Ran for 26050 frames Cell Events: 652 mean_circ: 0.94068
Ran for 27050 frames Cell Events: 681 mean_circ: 0.940555
Ran for 27550 frames Cell Events: 688 mean_circ: 0.940794
Ran for 28050 frames Cell Events: 710 mean_circ: 0.940575
Ran for 28550 frames Cell Events: 726 mean_circ: 0.940676
Ran for 29550 frames Cell Events: 749 mean_circ: 0.939966
Ran for 31050 frames Cell Events: 785 mean_circ: 0.939658
Ran for 31550 frames Cell Events: 799 mean_circ: 0.9399
Ran for 32550 frames Cell Events: 825 mean_circ: 0.940137
Ran for 34050 frames Cell Events: 861 mean_circ: 0.940317
Ran for 35050 frames Cell Events: 882 mean_circ: 0.940329
Ran for 35550 frames Cell Events: 894 mean_circ: 0.940435
Ran for 36050 frames Cell Events: 908 mean_circ: 0.940544
Ran for 36550 frames Cell Events: 925 mean_circ: 0.9401
Ran for 37050 frames Cell Events: 943 mean_circ: 0.939857
Ran for 38050 frames Cell Events: 974 mean_circ: 0.939645
Ran for 38550 frames Cell Events: 981 mean_circ: 0.939516
Ran for 39050 frames Cell Events: 995 mean_circ: 0.939535
Ran for 40050 frames Cell Events: 1025 mean_circ: 0.939426
Ran for 40550 frames Cell Events: 1042 mean_circ: 0.939496
Ran for 41050 frames Cell Events: 1048 mean_circ: 0.939555
Ran for 42050 frames Cell Events: 1069 mean_circ: 0.939741
Ran for 43050 frames Cell Events: 1094 mean_circ: 0.939634
Ran for 43550 frames Cell Events: 1099 mean_circ: 0.939654
Ran for 44050 frames Cell Events: 1109 mean_circ: 0.9396
Ran for 44550 frames Cell Events: 1123 mean_circ: 0.939421
Ran for 45050 frames Cell Events: 1133 mean_circ: 0.939522
Ran for 45550 frames Cell Events: 1139 mean_circ: 0.939487
Ran for 46050 frames Cell Events: 1148 mean_circ: 0.939696
Ran for 46550 frames Cell Events: 1157 mean_circ: 0.939792
Ran for 47050 frames Cell Events: 1167 mean_circ: 0.939716
Ran for 48050 frames Cell Events: 1190 mean_circ: 0.939843
Ran for 48550 frames Cell Events: 1197 mean_circ: 0.939801
Ran for 49050 frames Cell Events: 1205 mean_circ: 0.9399
Ran for 49550 frames Cell Events: 1218 mean_circ: 0.939625
Ran for 50050 frames Cell Events: 1233 mean_circ: 0.939973
Ran for 50550 frames Cell Events: 1239 mean_circ: 0.940046
Ran for 52050 frames Cell Events: 1269 mean_circ: 0.94035
Ran for 52550 frames Cell Events: 1276 mean_circ: 0.94035
Ran for 53050 frames Cell Events: 1286 mean_circ: 0.940507
Ran for 54050 frames Cell Events: 1295 mean_circ: 0.94047
Ran for 55050 frames Cell Events: 1311 mean_circ: 0.940349
Ran for 55550 frames Cell Events: 1319 mean_circ: 0.940407
Ran for 56050 frames Cell Events: 1333 mean_circ: 0.940534
Ran for 56550 frames Cell Events: 1337 mean_circ: 0.940571
Ran for 57050 frames Cell Events: 1345 mean_circ: 0.940505
Ran for 57550 frames Cell Events: 1355 mean_circ: 0.94056
Ran for 58050 frames Cell Events: 1364 mean_circ: 0.940624
Ran for 58550 frames Cell Events: 1383 mean_circ: 0.940795
Ran for 59050 frames Cell Events: 1395 mean_circ: 0.940842
Ran for 59550 frames Cell Events: 1405 mean_circ: 0.940859
Ran for 60050 frames Cell Events: 1412 mean_circ: 0.94077
Ran for 61050 frames Cell Events: 1429 mean_circ: 0.940948
Ran for 61550 frames Cell Events: 1442 mean_circ: 0.940886
Ran for 62050 frames Cell Events: 1449 mean_circ: 0.941011
Ran for 62550 frames Cell Events: 1458 mean_circ: 0.94116
Ran for 63550 frames Cell Events: 1477 mean_circ: 0.941295
Ran for 64050 frames Cell Events: 1486 mean_circ: 0.941281
Ran for 65050 frames Cell Events: 1516 mean_circ: 0.941034
Ran for 65550 frames Cell Events: 1518 mean_circ: 0.94112
Ran for 66050 frames Cell Events: 1526 mean_circ: 0.941121
Ran for 66550 frames Cell Events: 1541 mean_circ: 0.940965
Ran for 67050 frames Cell Events: 1554 mean_circ: 0.941016
Ran for 67550 frames Cell Events: 1564 mean_circ: 0.940941
Ran for 68050 frames Cell Events: 1576 mean_circ: 0.940896
Ran for 68550 frames Cell Events: 1582 mean_circ: 0.940941
Ran for 69550 frames Cell Events: 1606 mean_circ: 0.940823
Ran for 70050 frames Cell Events: 1620 mean_circ: 0.940968
Ran for 70550 frames Cell Events: 1631 mean_circ: 0.940988
Ran for 72550 frames Cell Events: 1675 mean_circ: 0.940825
Ran for 73050 frames Cell Events: 1681 mean_circ: 0.940923
Ran for 73550 frames Cell Events: 1688 mean_circ: 0.94087
Ran for 74050 frames Cell Events: 1694 mean_circ: 0.940839
Ran for 74550 frames Cell Events: 1706 mean_circ: 0.940919
Ran for 75050 frames Cell Events: 1725 mean_circ: 0.940925
Ran for 75550 frames Cell Events: 1732 mean_circ: 0.940927
Ran for 76550 frames Cell Events: 1752 mean_circ: 0.940912
Ran for 77050 frames Cell Events: 1766 mean_circ: 0.940856
Ran for 77550 frames Cell Events: 1779 mean_circ: 0.94088
Ran for 78050 frames Cell Events: 1791 mean_circ: 0.940779
Ran for 78550 frames Cell Events: 1802 mean_circ: 0.940788
Ran for 79550 frames Cell Events: 1821 mean_circ: 0.940972
Ran for 80550 frames Cell Events: 1842 mean_circ: 0.940961
Ran for 81050 frames Cell Events: 1850 mean_circ: 0.940866
Ran for 82050 frames Cell Events: 1869 mean_circ: 0.940697
Ran for 83050 frames Cell Events: 1892 mean_circ: 0.940778
Ran for 83550 frames Cell Events: 1896 mean_circ: 0.940818
Ran for 84550 frames Cell Events: 1916 mean_circ: 0.940998
Ran for 85550 frames Cell Events: 1948 mean_circ: 0.941067
Ran for 86050 frames Cell Events: 1958 mean_circ: 0.941104
Ran for 86550 frames Cell Events: 1964 mean_circ: 0.941016
Ran for 87050 frames Cell Events: 1972 mean_circ: 0.941025
Ran for 87550 frames Cell Events: 1986 mean_circ: 0.941077
Ran for 88050 frames Cell Events: 1993 mean_circ: 0.941135
Ran for 88550 frames Cell Events: 2002 mean_circ: 0.941174
Ran for 89050 frames Cell Events: 2017 mean_circ: 0.941059
Ran for 89550 frames Cell Events: 2038 mean_circ: 0.9411
Ran for 90050 frames Cell Events: 2043 mean_circ: 0.940824
Ran for 90550 frames Cell Events: 2055 mean_circ: 0.940664
Ran for 91050 frames Cell Events: 2074 mean_circ: 0.940418
Ran for 92050 frames Cell Events: 2093 mean_circ: 0.940374
Ran for 92550 frames Cell Events: 2102 mean_circ: 0.940372
Ran for 93050 frames Cell Events: 2108 mean_circ: 0.940386
Ran for 93550 frames Cell Events: 2118 mean_circ: 0.940439
Ran for 94050 frames Cell Events: 2126 mean_circ: 0.9405
Ran for 94550 frames Cell Events: 2142 mean_circ: 0.940634
Ran for 95050 frames Cell Events: 2152 mean_circ: 0.94071
Ran for 95550 frames Cell Events: 2158 mean_circ: 0.940665
Ran for 96550 frames Cell Events: 2177 mean_circ: 0.940539
Ran for 97050 frames Cell Events: 2186 mean_circ: 0.940546
Ran for 97550 frames Cell Events: 2194 mean_circ: 0.940511
Ran for 98050 frames Cell Events: 2202 mean_circ: 0.940515
Ran for 99550 frames Cell Events: 2228 mean_circ: 0.940455
Ran for 101050 frames Cell Events: 2270 mean_circ: 0.94051
Ran for 101550 frames Cell Events: 2277 mean_circ: 0.940587
Ran for 102050 frames Cell Events: 2290 mean_circ: 0.940629
Ran for 102550 frames Cell Events: 2296 mean_circ: 0.940647
Ran for 104050 frames Cell Events: 2331 mean_circ: 0.940442
Ran for 104550 frames Cell Events: 2343 mean_circ: 0.940398
Ran for 105550 frames Cell Events: 2363 mean_circ: 0.940231
Ran for 106050 frames Cell Events: 2379 mean_circ: 0.940215
Ran for 106550 frames Cell Events: 2391 mean_circ: 0.940187
Ran for 107050 frames Cell Events: 2398 mean_circ: 0.940216
Ran for 107550 frames Cell Events: 2411 mean_circ: 0.940261
Ran for 108050 frames Cell Events: 2418 mean_circ: 0.940236
Ran for 108550 frames Cell Events: 2426 mean_circ: 0.940274
Ran for 109550 frames Cell Events: 2480 mean_circ: 0.940119
Ran for 110050 frames Cell Events: 2494 mean_circ: 0.94008
Ran for 110550 frames Cell Events: 2501 mean_circ: 0.940121
Ran for 111050 frames Cell Events: 2514 mean_circ: 0.940069
Ran for 112050 frames Cell Events: 2543 mean_circ: 0.940115
Ran for 113050 frames Cell Events: 2569 mean_circ: 0.940168
Ran for 114550 frames Cell Events: 2602 mean_circ: 0.940188
Ran for 116050 frames Cell Events: 2640 mean_circ: 0.940202
Ran for 116550 frames Cell Events: 2654 mean_circ: 0.940107
Ran for 117550 frames Cell Events: 2676 mean_circ: 0.940004
Ran for 119550 frames Cell Events: 2722 mean_circ: 0.939828
Ran for 120050 frames Cell Events: 2725 mean_circ: 0.939859
Ran for 120550 frames Cell Events: 2733 mean_circ: 0.939844
Ran for 122050 frames Cell Events: 2768 mean_circ: 0.93975
Ran for 123050 frames Cell Events: 2788 mean_circ: 0.939715
Ran for 123550 frames Cell Events: 2799 mean_circ: 0.939704
Ran for 124050 frames Cell Events: 2811 mean_circ: 0.93962
Ran for 124550 frames Cell Events: 2818 mean_circ: 0.939541
Ran for 125050 frames Cell Events: 2837 mean_circ: 0.939517
Ran for 125550 frames Cell Events: 2845 mean_circ: 0.939604
Ran for 126550 frames Cell Events: 2875 mean_circ: 0.939644
Ran for 127050 frames Cell Events: 2881 mean_circ: 0.939643
Ran for 127550 frames Cell Events: 2889 mean_circ: 0.939694
Ran for 128050 frames Cell Events: 2910 mean_circ: 0.939583
Ran for 128550 frames Cell Events: 2911 mean_circ: 0.939536
Ran for 129050 frames Cell Events: 2921 mean_circ: 0.93948
Ran for 129550 frames Cell Events: 2936 mean_circ: 0.939519
Ran for 130550 frames Cell Events: 2950 mean_circ: 0.93936
Ran for 131050 frames Cell Events: 2956 mean_circ: 0.939289
Ran for 131550 frames Cell Events: 2966 mean_circ: 0.9393
Ran for 132050 frames Cell Events: 2978 mean_circ: 0.939338
Ran for 132550 frames Cell Events: 2988 mean_circ: 0.939353
Ran for 133050 frames Cell Events: 2996 mean_circ: 0.939388
Ran for 133550 frames Cell Events: 3005 mean_circ: 0.939379
Ran for 134550 frames Cell Events: 3021 mean_circ: 0.939314
Ran for 135050 frames Cell Events: 3031 mean_circ: 0.939385
Ran for 135550 frames Cell Events: 3045 mean_circ: 0.939497
Ran for 137050 frames Cell Events: 3089 mean_circ: 0.939513
Ran for 137550 frames Cell Events: 3099 mean_circ: 0.939569
Ran for 138550 frames Cell Events: 3120 mean_circ: 0.939476
Ran for 139550 frames Cell Events: 3151 mean_circ: 0.939496
Ran for 140550 frames Cell Events: 3176 mean_circ: 0.939417
Ran for 141050 frames Cell Events: 3182 mean_circ: 0.939367
Ran for 141550 frames Cell Events: 3196 mean_circ: 0.939445
Ran for 142550 frames Cell Events: 3216 mean_circ: 0.939345
Ran for 143050 frames Cell Events: 3232 mean_circ: 0.93942
Ran for 143550 frames Cell Events: 3236 mean_circ: 0.939448
Ran for 144550 frames Cell Events: 3251 mean_circ: 0.939339
Ran for 145550 frames Cell Events: 3273 mean_circ: 0.939306
Ran for 146050 frames Cell Events: 3283 mean_circ: 0.93929
Ran for 147050 frames Cell Events: 3307 mean_circ: 0.939325
Ran for 147550 frames Cell Events: 3318 mean_circ: 0.939405
Ran for 148050 frames Cell Events: 3329 mean_circ: 0.939495
Ran for 149050 frames Cell Events: 3350 mean_circ: 0.939585
Ran for 150550 frames Cell Events: 3384 mean_circ: 0.939488
Ran for 151050 frames Cell Events: 3398 mean_circ: 0.939452
Ran for 151550 frames Cell Events: 3414 mean_circ: 0.939439
Ran for 152050 frames Cell Events: 3426 mean_circ: 0.939427
Ran for 152550 frames Cell Events: 3440 mean_circ: 0.939459
Ran for 153050 frames Cell Events: 3450 mean_circ: 0.939393
Ran for 154050 frames Cell Events: 3465 mean_circ: 0.939483
Ran for 154550 frames Cell Events: 3472 mean_circ: 0.939457
Ran for 155050 frames Cell Events: 3481 mean_circ: 0.939413
Ran for 156050 frames Cell Events: 3505 mean_circ: 0.939456
Ran for 156550 frames Cell Events: 3512 mean_circ: 0.93944
Ran for 157050 frames Cell Events: 3522 mean_circ: 0.939469
Ran for 158550 frames Cell Events: 3556 mean_circ: 0.93949
Ran for 159550 frames Cell Events: 3583 mean_circ: 0.939505
Ran for 160050 frames Cell Events: 3590 mean_circ: 0.93952
Ran for 160550 frames Cell Events: 3604 mean_circ: 0.939553
Ran for 161050 frames Cell Events: 3620 mean_circ: 0.939513
Ran for 163550 frames Cell Events: 3671 mean_circ: 0.939365
Ran for 165050 frames Cell Events: 3697 mean_circ: 0.93939
Ran for 165550 frames Cell Events: 3706 mean_circ: 0.939369
Ran for 166050 frames Cell Events: 3710 mean_circ: 0.939394
Ran for 166550 frames Cell Events: 3722 mean_circ: 0.9394
Ran for 167550 frames Cell Events: 3739 mean_circ: 0.939474
Ran for 168050 frames Cell Events: 3742 mean_circ: 0.93947
Ran for 168550 frames Cell Events: 3752 mean_circ: 0.939458
Ran for 169050 frames Cell Events: 3759 mean_circ: 0.93945
Ran for 170050 frames Cell Events: 3790 mean_circ: 0.939423
Ran for 170550 frames Cell Events: 3800 mean_circ: 0.939436
Ran for 171050 frames Cell Events: 3811 mean_circ: 0.939442
Ran for 171550 frames Cell Events: 3824 mean_circ: 0.939473
Ran for 172050 frames Cell Events: 3831 mean_circ: 0.939498
Ran for 172550 frames Cell Events: 3838 mean_circ: 0.939514
Ran for 173050 frames Cell Events: 3850 mean_circ: 0.939536
Ran for 174550 frames Cell Events: 3887 mean_circ: 0.939514
Ran for 175050 frames Cell Events: 3899 mean_circ: 0.939519
Ran for 175550 frames Cell Events: 3904 mean_circ: 0.939528
Ran for 176050 frames Cell Events: 3912 mean_circ: 0.939519
Ran for 176550 frames Cell Events: 3921 mean_circ: 0.939505
Ran for 177050 frames Cell Events: 3938 mean_circ: 0.939543
Ran for 178550 frames Cell Events: 3978 mean_circ: 0.939605
Ran for 179050 frames Cell Events: 3987 mean_circ: 0.93959
Ran for 179550 frames Cell Events: 3994 mean_circ: 0.939583
Ran for 180050 frames Cell Events: 3997 mean_circ: 0.939596
Ran for 181050 frames Cell Events: 4016 mean_circ: 0.939615
Ran for 181550 frames Cell Events: 4021 mean_circ: 0.939637
Ran for 183550 frames Cell Events: 4062 mean_circ: 0.939681
Ran for 184050 frames Cell Events: 4072 mean_circ: 0.939675
Ran for 185050 frames Cell Events: 4091 mean_circ: 0.93962
Ran for 186550 frames Cell Events: 4131 mean_circ: 0.939613
Ran for 187550 frames Cell Events: 4149 mean_circ: 0.939677
Ran for 188050 frames Cell Events: 4162 mean_circ: 0.939706
Ran for 189050 frames Cell Events: 4179 mean_circ: 0.939639
Ran for 189550 frames Cell Events: 4194 mean_circ: 0.939676
Ran for 190050 frames Cell Events: 4204 mean_circ: 0.93965
Ran for 190550 frames Cell Events: 4216 mean_circ: 0.939664
Ran for 192050 frames Cell Events: 4256 mean_circ: 0.939726
Ran for 192550 frames Cell Events: 4270 mean_circ: 0.939757
Ran for 193050 frames Cell Events: 4282 mean_circ: 0.939711
Ran for 194050 frames Cell Events: 4310 mean_circ: 0.939689
Ran for 194550 frames Cell Events: 4325 mean_circ: 0.939709
Ran for 195550 frames Cell Events: 4353 mean_circ: 0.93972
Ran for 196050 frames Cell Events: 4364 mean_circ: 0.939687
Ran for 196550 frames Cell Events: 4378 mean_circ: 0.939676
Ran for 197050 frames Cell Events: 4395 mean_circ: 0.939696
Ran for 197550 frames Cell Events: 4406 mean_circ: 0.93967
Ran for 198050 frames Cell Events: 4423 mean_circ: 0.939702
Ran for 199050 frames Cell Events: 4449 mean_circ: 0.939643
Ran for 200050 frames Cell Events: 4478 mean_circ: 0.939644
Ran for 201050 frames Cell Events: 4508 mean_circ: 0.939717
Ran for 201550 frames Cell Events: 4524 mean_circ: 0.939743
Ran for 202550 frames Cell Events: 4545 mean_circ: 0.939753
Ran for 203550 frames Cell Events: 4573 mean_circ: 0.93975
Ran for 204050 frames Cell Events: 4575 mean_circ: 0.93975
Ran for 204550 frames Cell Events: 4583 mean_circ: 0.939797
Ran for 205050 frames Cell Events: 4597 mean_circ: 0.939833
Ran for 205550 frames Cell Events: 4603 mean_circ: 0.939863
Ran for 206050 frames Cell Events: 4614 mean_circ: 0.939916
Ran for 206550 frames Cell Events: 4631 mean_circ: 0.939985
Ran for 207050 frames Cell Events: 4641 mean_circ: 0.939951
Ran for 208050 frames Cell Events: 4671 mean_circ: 0.939933
Ran for 208550 frames Cell Events: 4685 mean_circ: 0.939893
Ran for 209050 frames Cell Events: 4696 mean_circ: 0.9399
Ran for 209550 frames Cell Events: 4711 mean_circ: 0.93992
Ran for 210050 frames Cell Events: 4724 mean_circ: 0.939861
Ran for 211550 frames Cell Events: 4762 mean_circ: 0.939907
Ran for 212050 frames Cell Events: 4771 mean_circ: 0.939891
Ran for 212550 frames Cell Events: 4785 mean_circ: 0.939818
Ran for 213050 frames Cell Events: 4799 mean_circ: 0.939763
Ran for 213550 frames Cell Events: 4814 mean_circ: 0.939756
Ran for 214050 frames Cell Events: 4823 mean_circ: 0.939745
Ran for 215550 frames Cell Events: 4851 mean_circ: 0.93979
Ran for 216050 frames Cell Events: 4863 mean_circ: 0.939766
Ran for 217050 frames Cell Events: 4881 mean_circ: 0.9398
Ran for 218050 frames Cell Events: 4908 mean_circ: 0.939697
Ran for 218550 frames Cell Events: 4920 mean_circ: 0.939733
Ran for 219050 frames Cell Events: 4927 mean_circ: 0.939742
Ran for 219550 frames Cell Events: 4939 mean_circ: 0.939766
Ran for 221050 frames Cell Events: 4981 mean_circ: 0.939865
Ran for 221550 frames Cell Events: 4991 mean_circ: 0.939871
Ran for 222050 frames Cell Events: 5005 mean_circ: 0.939883
Ran for 222550 frames Cell Events: 5016 mean_circ: 0.939909
Ran for 223050 frames Cell Events: 5025 mean_circ: 0.939923
Ran for 223550 frames Cell Events: 5034 mean_circ: 0.939893
Ran for 224550 frames Cell Events: 5049 mean_circ: 0.939898
Ran for 225050 frames Cell Events: 5063 mean_circ: 0.939899
Ran for 226550 frames Cell Events: 5097 mean_circ: 0.939937
Ran for 227050 frames Cell Events: 5108 mean_circ: 0.939922
Ran for 227550 frames Cell Events: 5116 mean_circ: 0.93994
Ran for 228050 frames Cell Events: 5124 mean_circ: 0.939959
Ran for 229050 frames Cell Events: 5151 mean_circ: 0.939985
Ran for 229550 frames Cell Events: 5159 mean_circ: 0.939983
Ran for 231050 frames Cell Events: 5185 mean_circ: 0.93991
Ran for 231550 frames Cell Events: 5199 mean_circ: 0.9399
Ran for 233050 frames Cell Events: 5227 mean_circ: 0.939867
Ran for 233550 frames Cell Events: 5236 mean_circ: 0.939869
Ran for 234050 frames Cell Events: 5247 mean_circ: 0.939827
Ran for 234550 frames Cell Events: 5255 mean_circ: 0.939827
Ran for 235550 frames Cell Events: 5283 mean_circ: 0.939823
Ran for 236550 frames Cell Events: 5299 mean_circ: 0.939855
Ran for 237050 frames Cell Events: 5312 mean_circ: 0.939859
Ran for 237550 frames Cell Events: 5319 mean_circ: 0.939854
Ran for 238050 frames Cell Events: 5336 mean_circ: 0.939829
Ran for 238550 frames Cell Events: 5342 mean_circ: 0.939832
Ran for 239050 frames Cell Events: 5352 mean_circ: 0.939867
Ran for 239550 frames Cell Events: 5360 mean_circ: 0.93988
Ran for 240550 frames Cell Events: 5381 mean_circ: 0.939882
Ran for 242050 frames Cell Events: 5422 mean_circ: 0.93986
Ran for 243050 frames Cell Events: 5450 mean_circ: 0.939853
Ran for 243550 frames Cell Events: 5458 mean_circ: 0.939837
Ran for 244550 frames Cell Events: 5476 mean_circ: 0.939823
Ran for 245050 frames Cell Events: 5488 mean_circ: 0.939788
Ran for 245550 frames Cell Events: 5495 mean_circ: 0.939744
Ran for 246050 frames Cell Events: 5499 mean_circ: 0.939761
Ran for 246550 frames Cell Events: 5504 mean_circ: 0.939776
Ran for 247050 frames Cell Events: 5516 mean_circ: 0.939741
Ran for 247550 frames Cell Events: 5525 mean_circ: 0.939732
Ran for 248050 frames Cell Events: 5541 mean_circ: 0.939781
Ran for 249050 frames Cell Events: 5554 mean_circ: 0.939769
Ran for 249550 frames Cell Events: 5566 mean_circ: 0.939751
Ran for 250550 frames Cell Events: 5590 mean_circ: 0.939743
Ran for 251550 frames Cell Events: 5625 mean_circ: 0.939815
Ran for 252050 frames Cell Events: 5638 mean_circ: 0.939871
Ran for 252550 frames Cell Events: 5651 mean_circ: 0.939885
Ran for 253050 frames Cell Events: 5661 mean_circ: 0.939897
Ran for 253550 frames Cell Events: 5680 mean_circ: 0.939828
Ran for 254050 frames Cell Events: 5691 mean_circ: 0.939819
Ran for 254550 frames Cell Events: 5701 mean_circ: 0.939827
Ran for 256050 frames Cell Events: 5737 mean_circ: 0.939767
Ran for 256550 frames Cell Events: 5746 mean_circ: 0.939784
Ran for 257050 frames Cell Events: 5755 mean_circ: 0.939737
Ran for 257550 frames Cell Events: 5761 mean_circ: 0.939677
Ran for 258550 frames Cell Events: 5789 mean_circ: 0.939698
Ran for 259550 frames Cell Events: 5812 mean_circ: 0.939704
Ran for 260050 frames Cell Events: 5830 mean_circ: 0.939762
Ran for 260550 frames Cell Events: 5845 mean_circ: 0.939768
Ran for 261050 frames Cell Events: 5850 mean_circ: 0.939776
Ran for 261550 frames Cell Events: 5862 mean_circ: 0.939784
Ran for 262050 frames Cell Events: 5869 mean_circ: 0.939771
Ran for 262550 frames Cell Events: 5883 mean_circ: 0.939808
Ran for 263050 frames Cell Events: 5890 mean_circ: 0.939829
Ran for 264050 frames Cell Events: 5917 mean_circ: 0.939858
Ran for 264550 frames Cell Events: 5927 mean_circ: 0.939846
Ran for 265550 frames Cell Events: 5951 mean_circ: 0.939806
Ran for 266550 frames Cell Events: 5984 mean_circ: 0.939762
Ran for 268050 frames Cell Events: 6023 mean_circ: 0.939761
Ran for 268550 frames Cell Events: 6028 mean_circ: 0.939774
Ran for 269050 frames Cell Events: 6035 mean_circ: 0.939732
Ran for 269550 frames Cell Events: 6052 mean_circ: 0.939739
Ran for 270050 frames Cell Events: 6066 mean_circ: 0.93975
Ran for 270550 frames Cell Events: 6078 mean_circ: 0.939726
Ran for 272050 frames Cell Events: 6115 mean_circ: 0.939704
Ran for 272550 frames Cell Events: 6131 mean_circ: 0.939713
Ran for 273050 frames Cell Events: 6136 mean_circ: 0.939724
Ran for 273550 frames Cell Events: 6149 mean_circ: 0.939731
Ran for 274050 frames Cell Events: 6155 mean_circ: 0.939742
Ran for 274550 frames Cell Events: 6173 mean_circ: 0.939737
Ran for 275550 frames Cell Events: 6205 mean_circ: 0.939697
Ran for 277550 frames Cell Events: 6267 mean_circ: 0.939621
Ran for 278050 frames Cell Events: 6276 mean_circ: 0.939596
Ran for 280550 frames Cell Events: 6345 mean_circ: 0.939548
Ran for 281050 frames Cell Events: 6357 mean_circ: 0.939473
Ran for 281550 frames Cell Events: 6370 mean_circ: 0.939433
Ran for 282050 frames Cell Events: 6393 mean_circ: 0.939419
Ran for 282550 frames Cell Events: 6400 mean_circ: 0.939402
Ran for 283050 frames Cell Events: 6410 mean_circ: 0.939412
Ran for 284550 frames Cell Events: 6453 mean_circ: 0.939492
Ran for 286550 frames Cell Events: 6514 mean_circ: 0.939424
Ran for 287050 frames Cell Events: 6525 mean_circ: 0.939432
Ran for 288050 frames Cell Events: 6562 mean_circ: 0.939369
Ran for 288550 frames Cell Events: 6573 mean_circ: 0.939283
Ran for 289050 frames Cell Events: 6585 mean_circ: 0.939309
Ran for 289550 frames Cell Events: 6597 mean_circ: 0.939325
Ran for 290550 frames Cell Events: 6625 mean_circ: 0.939281
Ran for 291050 frames Cell Events: 6646 mean_circ: 0.93925
Ran for 291550 frames Cell Events: 6661 mean_circ: 0.939207
Ran for 292550 frames Cell Events: 6685 mean_circ: 0.939246
Ran for 293050 frames Cell Events: 6700 mean_circ: 0.939251
Ran for 293550 frames Cell Events: 6714 mean_circ: 0.939334
Ran for 294050 frames Cell Events: 6727 mean_circ: 0.939343
Ran for 294550 frames Cell Events: 6737 mean_circ: 0.939393
Ran for 295550 frames Cell Events: 6759 mean_circ: 0.93941
Ran for 296550 frames Cell Events: 6785 mean_circ: 0.939384
Ran for 297550 frames Cell Events: 6813 mean_circ: 0.93939
Ran for 298050 frames Cell Events: 6825 mean_circ: 0.939408
Ran for 298550 frames Cell Events: 6834 mean_circ: 0.939394
Ran for 299550 frames Cell Events: 6864 mean_circ: 0.939384
Ran for 300050 frames Cell Events: 6871 mean_circ: 0.93939
Ran for 301050 frames Cell Events: 6888 mean_circ: 0.939385
Ran for 303050 frames Cell Events: 6949 mean_circ: 0.939357
Ran for 303550 frames Cell Events: 6967 mean_circ: 0.939342
Ran for 304550 frames Cell Events: 6989 mean_circ: 0.939337
Ran for 305550 frames Cell Events: 7014 mean_circ: 0.939298
Ran for 306050 frames Cell Events: 7028 mean_circ: 0.939285
Ran for 306550 frames Cell Events: 7044 mean_circ: 0.939291
Ran for 307050 frames Cell Events: 7047 mean_circ: 0.939305
Ran for 307550 frames Cell Events: 7066 mean_circ: 0.939315
Ran for 308050 frames Cell Events: 7082 mean_circ: 0.939348
Ran for 308550 frames Cell Events: 7092 mean_circ: 0.939354
Ran for 310050 frames Cell Events: 7129 mean_circ: 0.93934
Ran for 310550 frames Cell Events: 7140 mean_circ: 0.939356
Ran for 311050 frames Cell Events: 7143 mean_circ: 0.93935
Ran for 312550 frames Cell Events: 7169 mean_circ: 0.939349
Ran for 313050 frames Cell Events: 7184 mean_circ: 0.939341
Ran for 313550 frames Cell Events: 7195 mean_circ: 0.939362
Ran for 314050 frames Cell Events: 7206 mean_circ: 0.939384
Ran for 314550 frames Cell Events: 7218 mean_circ: 0.93938
Ran for 315050 frames Cell Events: 7230 mean_circ: 0.939391
Ran for 315550 frames Cell Events: 7247 mean_circ: 0.939388
Ran for 316550 frames Cell Events: 7266 mean_circ: 0.939329
Ran for 317050 frames Cell Events: 7275 mean_circ: 0.93932
Ran for 317550 frames Cell Events: 7289 mean_circ: 0.939288
Ran for 318550 frames Cell Events: 7310 mean_circ: 0.939314
Ran for 319050 frames Cell Events: 7320 mean_circ: 0.939343
Ran for 320550 frames Cell Events: 7349 mean_circ: 0.939306
Ran for 321050 frames Cell Events: 7369 mean_circ: 0.939342
Ran for 321550 frames Cell Events: 7383 mean_circ: 0.939352
Ran for 322050 frames Cell Events: 7392 mean_circ: 0.939365
Ran for 322550 frames Cell Events: 7400 mean_circ: 0.9394
Ran for 323050 frames Cell Events: 7411 mean_circ: 0.939411
Ran for 323550 frames Cell Events: 7425 mean_circ: 0.93942
Ran for 325050 frames Cell Events: 7478 mean_circ: 0.939436
Ran for 325550 frames Cell Events: 7489 mean_circ: 0.939452
Ran for 326050 frames Cell Events: 7498 mean_circ: 0.939425
Ran for 326550 frames Cell Events: 7510 mean_circ: 0.939423
Ran for 327050 frames Cell Events: 7523 mean_circ: 0.939454
Ran for 327550 frames Cell Events: 7532 mean_circ: 0.93945
Ran for 328550 frames Cell Events: 7556 mean_circ: 0.939422
Ran for 329050 frames Cell Events: 7567 mean_circ: 0.939391
Ran for 329550 frames Cell Events: 7577 mean_circ: 0.939394
Ran for 331050 frames Cell Events: 7605 mean_circ: 0.93939
Ran for 331550 frames Cell Events: 7616 mean_circ: 0.939399
Ran for 332050 frames Cell Events: 7623 mean_circ: 0.939395
Ran for 333550 frames Cell Events: 7671 mean_circ: 0.939434
Ran for 335550 frames Cell Events: 7711 mean_circ: 0.939481
Ran for 336550 frames Cell Events: 7745 mean_circ: 0.939495
Ran for 337050 frames Cell Events: 7761 mean_circ: 0.939494
Ran for 337550 frames Cell Events: 7774 mean_circ: 0.939493
Ran for 338050 frames Cell Events: 7787 mean_circ: 0.939507
Ran for 338550 frames Cell Events: 7804 mean_circ: 0.939476
Ran for 339550 frames Cell Events: 7838 mean_circ: 0.939462
Ran for 341050 frames Cell Events: 7874 mean_circ: 0.939489
Ran for 342050 frames Cell Events: 7897 mean_circ: 0.939471
Ran for 342550 frames Cell Events: 7903 mean_circ: 0.939473
Ran for 343050 frames Cell Events: 7913 mean_circ: 0.939465
Ran for 343550 frames Cell Events: 7926 mean_circ: 0.939447
Ran for 345050 frames Cell Events: 7964 mean_circ: 0.939432
Ran for 347050 frames Cell Events: 8029 mean_circ: 0.939325
Ran for 347550 frames Cell Events: 8040 mean_circ: 0.939275
Ran for 348050 frames Cell Events: 8050 mean_circ: 0.939295
Ran for 349550 frames Cell Events: 8087 mean_circ: 0.93933
Ran for 350050 frames Cell Events: 8097 mean_circ: 0.939331
Ran for 350550 frames Cell Events: 8115 mean_circ: 0.939362
Ran for 351050 frames Cell Events: 8132 mean_circ: 0.939369
Ran for 352050 frames Cell Events: 8156 mean_circ: 0.9394
Ran for 352550 frames Cell Events: 8179 mean_circ: 0.939398
Ran for 353550 frames Cell Events: 8205 mean_circ: 0.939385
Ran for 354050 frames Cell Events: 8213 mean_circ: 0.939405



End this measurment..



Stopping time: 2.18697e+009
****************************************
Measurement finished

Mean Circularitiy: 0.939412
Mean Area: 700.868
Mean FL-1 intensity: 3676.46
Mean FL-2 intensity: 4504.68
Mean FL-3 intensity: 0

frames processed: 353672
Total Time: 177199ms
Number of Runs (new bg img) 0
Frames collected: 354249
Skipped frames: 44421
Rescued Frames: 4262828
Samples DAQ: 88563644
Samples written: 177124622
Samples per Channel: 88562311
FPS: 1999.16

Samples per second: 499790
Expected samples/s: 500000

Events: 8217
Events per second: 46.3716
jumped back (PMT): 5482
#Frames read, frequency
# 0 frames :502721
# 1 frames :182353
# 2 frames :5786
# 3 frames :2991
# 4 frames :1625
# 5 frames :1167
# 6 frames :943
# 7 frames :1532
# 8 frames :1412
# 9 frames :1117
# 10 frames :1174
# 11 frames :958
# 12 frames :915
# 13 frames :707
# 14 frames :453
# 15 frames :361
# 16 frames :281
# 17 frames :271
# 18 frames :290
# 19 frames :271
# 20 frames :239
# 21 frames :183
# 22 frames :135
# 23 frames :81
# 24 frames :76
# 25 frames :57
# 26 frames :48
# 27 frames :34
# 28 frames :37
# 29 frames :31
# 30 frames :31
# 31 frames :27
# 32 frames :14
# 33 frames :15
# 34 frames :11
# 35 frames :11
# 36 frames :13
# 37 frames :7
# 38 frames :11
# 39 frames :9
# 40 frames :5
# 41 frames :3
# 42 frames :4
# 43 frames :3
# 44 frames :4
# 45 frames :3
# 46 frames :3
# 47 frames :3
# 49 frames :1
# 51 frames :2
# 52 frames :2
# 54 frames :1
# 58 frames :1
# 60 frames :1
# 64 frames :2
# 71 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.7927
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0