Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_16.23.41 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "219aa1ef3f89d1b30954cca961e6a9f3",
"name": "M1_20170611_1905_dsRNA_Q2_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "14:24:02"
}
}
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.2566
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.37137e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.940869
Ran for 550 frames Cell Events: 10 mean_circ: 0.918166
Ran for 1050 frames Cell Events: 29 mean_circ: 0.938971
Ran for 1550 frames Cell Events: 38 mean_circ: 0.943131
Ran for 2050 frames Cell Events: 58 mean_circ: 0.947309
Ran for 3050 frames Cell Events: 94 mean_circ: 0.948279
Ran for 3550 frames Cell Events: 108 mean_circ: 0.948005
Ran for 4050 frames Cell Events: 121 mean_circ: 0.948753
Ran for 4550 frames Cell Events: 137 mean_circ: 0.947237
Ran for 6050 frames Cell Events: 185 mean_circ: 0.948446
Ran for 6550 frames Cell Events: 204 mean_circ: 0.948405
Ran for 7050 frames Cell Events: 217 mean_circ: 0.948804
Ran for 8050 frames Cell Events: 234 mean_circ: 0.948912
Ran for 8550 frames Cell Events: 257 mean_circ: 0.949353
Ran for 9050 frames Cell Events: 265 mean_circ: 0.949202
Ran for 9550 frames Cell Events: 275 mean_circ: 0.949179
Ran for 10050 frames Cell Events: 288 mean_circ: 0.948762
Ran for 10550 frames Cell Events: 305 mean_circ: 0.948511
Ran for 11050 frames Cell Events: 317 mean_circ: 0.948652
Ran for 12550 frames Cell Events: 369 mean_circ: 0.94833
Ran for 13050 frames Cell Events: 382 mean_circ: 0.948297
Ran for 13550 frames Cell Events: 398 mean_circ: 0.948095
Ran for 14550 frames Cell Events: 435 mean_circ: 0.94806
Ran for 15050 frames Cell Events: 444 mean_circ: 0.947918
Ran for 15550 frames Cell Events: 462 mean_circ: 0.948055
Ran for 16050 frames Cell Events: 472 mean_circ: 0.9484
Ran for 16550 frames Cell Events: 484 mean_circ: 0.948534
Ran for 17550 frames Cell Events: 512 mean_circ: 0.948942
Ran for 18050 frames Cell Events: 521 mean_circ: 0.949219
Ran for 18550 frames Cell Events: 539 mean_circ: 0.948588
Ran for 19050 frames Cell Events: 553 mean_circ: 0.948756
Ran for 19550 frames Cell Events: 570 mean_circ: 0.948205
Ran for 20050 frames Cell Events: 585 mean_circ: 0.948336
Ran for 20550 frames Cell Events: 604 mean_circ: 0.948238
Ran for 21050 frames Cell Events: 617 mean_circ: 0.948503
Ran for 22050 frames Cell Events: 653 mean_circ: 0.948839
Ran for 23050 frames Cell Events: 684 mean_circ: 0.948586
Ran for 25050 frames Cell Events: 741 mean_circ: 0.947957
Ran for 25550 frames Cell Events: 762 mean_circ: 0.947991
Ran for 26050 frames Cell Events: 781 mean_circ: 0.948146
Ran for 27050 frames Cell Events: 808 mean_circ: 0.947817
Ran for 28050 frames Cell Events: 845 mean_circ: 0.947849
Ran for 28550 frames Cell Events: 870 mean_circ: 0.947732
Ran for 29050 frames Cell Events: 877 mean_circ: 0.948108
Ran for 29550 frames Cell Events: 895 mean_circ: 0.948284
Ran for 30050 frames Cell Events: 907 mean_circ: 0.948174
Ran for 31050 frames Cell Events: 926 mean_circ: 0.948245
Ran for 31550 frames Cell Events: 944 mean_circ: 0.947967
Ran for 32050 frames Cell Events: 955 mean_circ: 0.948046
Ran for 32550 frames Cell Events: 971 mean_circ: 0.947835
Ran for 33050 frames Cell Events: 991 mean_circ: 0.947898
Ran for 34050 frames Cell Events: 1021 mean_circ: 0.94811
Ran for 34550 frames Cell Events: 1030 mean_circ: 0.948099
Ran for 35050 frames Cell Events: 1045 mean_circ: 0.948032
Ran for 35550 frames Cell Events: 1069 mean_circ: 0.948324
Ran for 36050 frames Cell Events: 1082 mean_circ: 0.948462
Ran for 36550 frames Cell Events: 1107 mean_circ: 0.948616
Ran for 37050 frames Cell Events: 1118 mean_circ: 0.948584
Ran for 37550 frames Cell Events: 1135 mean_circ: 0.948628
Ran for 38550 frames Cell Events: 1161 mean_circ: 0.948643
Ran for 39050 frames Cell Events: 1180 mean_circ: 0.948616
Ran for 40050 frames Cell Events: 1215 mean_circ: 0.948636
Ran for 40550 frames Cell Events: 1235 mean_circ: 0.948703
Ran for 41550 frames Cell Events: 1274 mean_circ: 0.948815
Ran for 42550 frames Cell Events: 1306 mean_circ: 0.948703
Ran for 43050 frames Cell Events: 1324 mean_circ: 0.948756
Ran for 44050 frames Cell Events: 1348 mean_circ: 0.948722
Ran for 44550 frames Cell Events: 1359 mean_circ: 0.948736
Ran for 45050 frames Cell Events: 1389 mean_circ: 0.948775
Ran for 45550 frames Cell Events: 1399 mean_circ: 0.948905
Ran for 46050 frames Cell Events: 1412 mean_circ: 0.948992
Ran for 46550 frames Cell Events: 1427 mean_circ: 0.948987
Ran for 47050 frames Cell Events: 1449 mean_circ: 0.948974
Ran for 47550 frames Cell Events: 1463 mean_circ: 0.949036
Ran for 48050 frames Cell Events: 1474 mean_circ: 0.949092
Ran for 49050 frames Cell Events: 1517 mean_circ: 0.949141
Ran for 49550 frames Cell Events: 1536 mean_circ: 0.949267
Ran for 50050 frames Cell Events: 1564 mean_circ: 0.949218
Ran for 51050 frames Cell Events: 1596 mean_circ: 0.949288
Ran for 51550 frames Cell Events: 1623 mean_circ: 0.949126
Ran for 52050 frames Cell Events: 1643 mean_circ: 0.949283
Ran for 52550 frames Cell Events: 1655 mean_circ: 0.949346
Ran for 53050 frames Cell Events: 1674 mean_circ: 0.949199
Ran for 53550 frames Cell Events: 1688 mean_circ: 0.949162
Ran for 54050 frames Cell Events: 1715 mean_circ: 0.949146
Ran for 54550 frames Cell Events: 1730 mean_circ: 0.94916
Ran for 55050 frames Cell Events: 1747 mean_circ: 0.949075
Ran for 55550 frames Cell Events: 1764 mean_circ: 0.949103
Ran for 56050 frames Cell Events: 1777 mean_circ: 0.949172
Ran for 56550 frames Cell Events: 1795 mean_circ: 0.949075
Ran for 57050 frames Cell Events: 1812 mean_circ: 0.949066
Ran for 58050 frames Cell Events: 1848 mean_circ: 0.948929
Ran for 58550 frames Cell Events: 1865 mean_circ: 0.948942
Ran for 59050 frames Cell Events: 1876 mean_circ: 0.948893
Ran for 59550 frames Cell Events: 1889 mean_circ: 0.948939
Ran for 60050 frames Cell Events: 1916 mean_circ: 0.948963
Ran for 60550 frames Cell Events: 1930 mean_circ: 0.948887
Ran for 62050 frames Cell Events: 2011 mean_circ: 0.948664
Ran for 62550 frames Cell Events: 2040 mean_circ: 0.948762
Ran for 63050 frames Cell Events: 2066 mean_circ: 0.948719
Ran for 63550 frames Cell Events: 2080 mean_circ: 0.948695
Ran for 64050 frames Cell Events: 2095 mean_circ: 0.948542
Ran for 64550 frames Cell Events: 2110 mean_circ: 0.948599
Ran for 65050 frames Cell Events: 2125 mean_circ: 0.948526
Ran for 65550 frames Cell Events: 2136 mean_circ: 0.948589
Ran for 66050 frames Cell Events: 2150 mean_circ: 0.948651
Ran for 66550 frames Cell Events: 2158 mean_circ: 0.948661
Ran for 67050 frames Cell Events: 2170 mean_circ: 0.948693
Ran for 67550 frames Cell Events: 2189 mean_circ: 0.948666
Ran for 68050 frames Cell Events: 2198 mean_circ: 0.948652
Ran for 68550 frames Cell Events: 2207 mean_circ: 0.948715
Ran for 69550 frames Cell Events: 2231 mean_circ: 0.948734
Ran for 70050 frames Cell Events: 2243 mean_circ: 0.948821
Ran for 70550 frames Cell Events: 2265 mean_circ: 0.94885
Ran for 71550 frames Cell Events: 2306 mean_circ: 0.948614
Ran for 72050 frames Cell Events: 2326 mean_circ: 0.948674
Ran for 72550 frames Cell Events: 2338 mean_circ: 0.948558
Ran for 73050 frames Cell Events: 2358 mean_circ: 0.948552
Ran for 73550 frames Cell Events: 2375 mean_circ: 0.948619
Ran for 74050 frames Cell Events: 2382 mean_circ: 0.948672
Ran for 74550 frames Cell Events: 2390 mean_circ: 0.948686
Ran for 75050 frames Cell Events: 2399 mean_circ: 0.948686
Ran for 75550 frames Cell Events: 2412 mean_circ: 0.948702
Ran for 76550 frames Cell Events: 2448 mean_circ: 0.948793
Ran for 77050 frames Cell Events: 2477 mean_circ: 0.948872
Ran for 77550 frames Cell Events: 2488 mean_circ: 0.948806
Ran for 78050 frames Cell Events: 2504 mean_circ: 0.948834
Ran for 79050 frames Cell Events: 2533 mean_circ: 0.948745
Ran for 79550 frames Cell Events: 2556 mean_circ: 0.948769
Ran for 80050 frames Cell Events: 2572 mean_circ: 0.948712
Ran for 80550 frames Cell Events: 2592 mean_circ: 0.948697
Ran for 82050 frames Cell Events: 2643 mean_circ: 0.948623
Ran for 82550 frames Cell Events: 2661 mean_circ: 0.948544
Ran for 83050 frames Cell Events: 2673 mean_circ: 0.948635
Ran for 83550 frames Cell Events: 2684 mean_circ: 0.948641
Ran for 84050 frames Cell Events: 2691 mean_circ: 0.948615
Ran for 85550 frames Cell Events: 2741 mean_circ: 0.948421
Ran for 86050 frames Cell Events: 2761 mean_circ: 0.948473
Ran for 86550 frames Cell Events: 2780 mean_circ: 0.948514
Ran for 87050 frames Cell Events: 2796 mean_circ: 0.948378
Ran for 87550 frames Cell Events: 2817 mean_circ: 0.948461
Ran for 89550 frames Cell Events: 2903 mean_circ: 0.948485
Ran for 90550 frames Cell Events: 2936 mean_circ: 0.948515
Ran for 92550 frames Cell Events: 2987 mean_circ: 0.948599
Ran for 93050 frames Cell Events: 3001 mean_circ: 0.948613
Ran for 93550 frames Cell Events: 3014 mean_circ: 0.948605
Ran for 94050 frames Cell Events: 3031 mean_circ: 0.948652
Ran for 95050 frames Cell Events: 3069 mean_circ: 0.948749
Ran for 95550 frames Cell Events: 3092 mean_circ: 0.948755
Ran for 96050 frames Cell Events: 3115 mean_circ: 0.948835
Ran for 97050 frames Cell Events: 3144 mean_circ: 0.948888
Ran for 98550 frames Cell Events: 3169 mean_circ: 0.948941
Ran for 99050 frames Cell Events: 3186 mean_circ: 0.948915
Ran for 99550 frames Cell Events: 3199 mean_circ: 0.948913
Ran for 100050 frames Cell Events: 3210 mean_circ: 0.94892
Ran for 100550 frames Cell Events: 3221 mean_circ: 0.948902
Ran for 101050 frames Cell Events: 3238 mean_circ: 0.948872
Ran for 101550 frames Cell Events: 3252 mean_circ: 0.948865
Ran for 102050 frames Cell Events: 3268 mean_circ: 0.948856
Ran for 102550 frames Cell Events: 3284 mean_circ: 0.948809
Ran for 103050 frames Cell Events: 3306 mean_circ: 0.948854
Ran for 103550 frames Cell Events: 3312 mean_circ: 0.948803
Ran for 104050 frames Cell Events: 3332 mean_circ: 0.948872
Ran for 104550 frames Cell Events: 3345 mean_circ: 0.948868
Ran for 105050 frames Cell Events: 3363 mean_circ: 0.948745
Ran for 105550 frames Cell Events: 3386 mean_circ: 0.948784
Ran for 106050 frames Cell Events: 3405 mean_circ: 0.948742
Ran for 106550 frames Cell Events: 3428 mean_circ: 0.948715
Ran for 107050 frames Cell Events: 3448 mean_circ: 0.94867
Ran for 107550 frames Cell Events: 3465 mean_circ: 0.948573
Ran for 108050 frames Cell Events: 3490 mean_circ: 0.948578
Ran for 108550 frames Cell Events: 3509 mean_circ: 0.948532
Ran for 109050 frames Cell Events: 3520 mean_circ: 0.94854
Ran for 109550 frames Cell Events: 3536 mean_circ: 0.94859
Ran for 110550 frames Cell Events: 3567 mean_circ: 0.948685
Ran for 111050 frames Cell Events: 3574 mean_circ: 0.948681
Ran for 112050 frames Cell Events: 3626 mean_circ: 0.948693
Ran for 112550 frames Cell Events: 3640 mean_circ: 0.948655
Ran for 113050 frames Cell Events: 3658 mean_circ: 0.948603
Ran for 114050 frames Cell Events: 3697 mean_circ: 0.948603
Ran for 114550 frames Cell Events: 3714 mean_circ: 0.948509
Ran for 115050 frames Cell Events: 3730 mean_circ: 0.948536
Ran for 116050 frames Cell Events: 3764 mean_circ: 0.948553
Ran for 116550 frames Cell Events: 3787 mean_circ: 0.948559
Ran for 117050 frames Cell Events: 3809 mean_circ: 0.948556
Ran for 117550 frames Cell Events: 3832 mean_circ: 0.948658
Ran for 118050 frames Cell Events: 3855 mean_circ: 0.948649
Ran for 118550 frames Cell Events: 3879 mean_circ: 0.948567
Ran for 119050 frames Cell Events: 3894 mean_circ: 0.948551
Ran for 120050 frames Cell Events: 3922 mean_circ: 0.948581
Ran for 120550 frames Cell Events: 3949 mean_circ: 0.948602
Ran for 122050 frames Cell Events: 4011 mean_circ: 0.948663
Ran for 122550 frames Cell Events: 4017 mean_circ: 0.948666
Ran for 123550 frames Cell Events: 4057 mean_circ: 0.948751
Ran for 124050 frames Cell Events: 4076 mean_circ: 0.948744
Ran for 124550 frames Cell Events: 4086 mean_circ: 0.948744
Ran for 125050 frames Cell Events: 4100 mean_circ: 0.948752
Ran for 126050 frames Cell Events: 4134 mean_circ: 0.948721
Ran for 126550 frames Cell Events: 4157 mean_circ: 0.948702
Ran for 127050 frames Cell Events: 4168 mean_circ: 0.948725
Ran for 128050 frames Cell Events: 4206 mean_circ: 0.948756
Ran for 128550 frames Cell Events: 4225 mean_circ: 0.948722
Ran for 129050 frames Cell Events: 4240 mean_circ: 0.948711
Ran for 129550 frames Cell Events: 4255 mean_circ: 0.948738
Ran for 130550 frames Cell Events: 4289 mean_circ: 0.948726
Ran for 131050 frames Cell Events: 4301 mean_circ: 0.94869
Ran for 131550 frames Cell Events: 4316 mean_circ: 0.948676
Ran for 132050 frames Cell Events: 4325 mean_circ: 0.948666
Ran for 133050 frames Cell Events: 4357 mean_circ: 0.948671
Ran for 134050 frames Cell Events: 4382 mean_circ: 0.948658
Ran for 134550 frames Cell Events: 4394 mean_circ: 0.948685
Ran for 135550 frames Cell Events: 4432 mean_circ: 0.948682
Ran for 136050 frames Cell Events: 4438 mean_circ: 0.948668
Ran for 136550 frames Cell Events: 4451 mean_circ: 0.948655
Ran for 137050 frames Cell Events: 4468 mean_circ: 0.948653
Ran for 137550 frames Cell Events: 4488 mean_circ: 0.948662
Ran for 138050 frames Cell Events: 4499 mean_circ: 0.948673
Ran for 139050 frames Cell Events: 4536 mean_circ: 0.948527
Ran for 139550 frames Cell Events: 4558 mean_circ: 0.948531
Ran for 140550 frames Cell Events: 4603 mean_circ: 0.948538
Ran for 141050 frames Cell Events: 4616 mean_circ: 0.948516
Ran for 141550 frames Cell Events: 4633 mean_circ: 0.948546
Ran for 142050 frames Cell Events: 4655 mean_circ: 0.94854
Ran for 143550 frames Cell Events: 4732 mean_circ: 0.948616
Ran for 144050 frames Cell Events: 4746 mean_circ: 0.948627
Ran for 144550 frames Cell Events: 4764 mean_circ: 0.948643
Ran for 145050 frames Cell Events: 4778 mean_circ: 0.948661
Ran for 145550 frames Cell Events: 4791 mean_circ: 0.948684
Ran for 146050 frames Cell Events: 4816 mean_circ: 0.948677
Ran for 146550 frames Cell Events: 4833 mean_circ: 0.948701
Ran for 147050 frames Cell Events: 4845 mean_circ: 0.948703
Ran for 147550 frames Cell Events: 4865 mean_circ: 0.948694
Ran for 148050 frames Cell Events: 4887 mean_circ: 0.948706
Ran for 149050 frames Cell Events: 4922 mean_circ: 0.948746
Ran for 150050 frames Cell Events: 4958 mean_circ: 0.948792
Ran for 151550 frames Cell Events: 5012 mean_circ: 0.948777
Ran for 152550 frames Cell Events: 5041 mean_circ: 0.948741
Ran for 153550 frames Cell Events: 5076 mean_circ: 0.948774
Ran for 154550 frames Cell Events: 5116 mean_circ: 0.948671
Ran for 155550 frames Cell Events: 5154 mean_circ: 0.948702
Ran for 156050 frames Cell Events: 5163 mean_circ: 0.948702
Ran for 156550 frames Cell Events: 5178 mean_circ: 0.948685
Ran for 157550 frames Cell Events: 5200 mean_circ: 0.948686
Ran for 158050 frames Cell Events: 5207 mean_circ: 0.94866
Ran for 158550 frames Cell Events: 5227 mean_circ: 0.948652
Ran for 159050 frames Cell Events: 5236 mean_circ: 0.948678
Ran for 159550 frames Cell Events: 5253 mean_circ: 0.948646
Ran for 161050 frames Cell Events: 5311 mean_circ: 0.948693
Ran for 161550 frames Cell Events: 5335 mean_circ: 0.948692
Ran for 162050 frames Cell Events: 5353 mean_circ: 0.948733
Ran for 163050 frames Cell Events: 5376 mean_circ: 0.948744
Ran for 163550 frames Cell Events: 5385 mean_circ: 0.948762
Ran for 164050 frames Cell Events: 5401 mean_circ: 0.948754
Ran for 164550 frames Cell Events: 5421 mean_circ: 0.948751
Ran for 165050 frames Cell Events: 5432 mean_circ: 0.948782
Ran for 166050 frames Cell Events: 5473 mean_circ: 0.94881
Ran for 166550 frames Cell Events: 5484 mean_circ: 0.948774
Ran for 167050 frames Cell Events: 5501 mean_circ: 0.948755
Ran for 167550 frames Cell Events: 5515 mean_circ: 0.948793
Ran for 168050 frames Cell Events: 5532 mean_circ: 0.948794
Ran for 170050 frames Cell Events: 5590 mean_circ: 0.948791
Ran for 170550 frames Cell Events: 5610 mean_circ: 0.948791
Ran for 171550 frames Cell Events: 5654 mean_circ: 0.948859
Ran for 172050 frames Cell Events: 5668 mean_circ: 0.948828
Ran for 175050 frames Cell Events: 5783 mean_circ: 0.948797
Ran for 175550 frames Cell Events: 5797 mean_circ: 0.9488
Ran for 176550 frames Cell Events: 5838 mean_circ: 0.948812
Ran for 177050 frames Cell Events: 5854 mean_circ: 0.94884
Ran for 178050 frames Cell Events: 5901 mean_circ: 0.948809
Ran for 178550 frames Cell Events: 5922 mean_circ: 0.948799
Ran for 179050 frames Cell Events: 5940 mean_circ: 0.948819
Ran for 179550 frames Cell Events: 5949 mean_circ: 0.948808
Ran for 180050 frames Cell Events: 5965 mean_circ: 0.948807
Ran for 181050 frames Cell Events: 5994 mean_circ: 0.948764
Ran for 181550 frames Cell Events: 6016 mean_circ: 0.948779
Ran for 182050 frames Cell Events: 6036 mean_circ: 0.948813
Ran for 182550 frames Cell Events: 6055 mean_circ: 0.948809
Ran for 183050 frames Cell Events: 6076 mean_circ: 0.948756
Ran for 183550 frames Cell Events: 6095 mean_circ: 0.948759
Ran for 184050 frames Cell Events: 6105 mean_circ: 0.948746
Ran for 184550 frames Cell Events: 6112 mean_circ: 0.948748
Ran for 185550 frames Cell Events: 6155 mean_circ: 0.948665
Ran for 186550 frames Cell Events: 6181 mean_circ: 0.948665
Ran for 187050 frames Cell Events: 6202 mean_circ: 0.948643
Ran for 187550 frames Cell Events: 6223 mean_circ: 0.948631
Ran for 188550 frames Cell Events: 6244 mean_circ: 0.948685
Ran for 189050 frames Cell Events: 6265 mean_circ: 0.948712
Ran for 190050 frames Cell Events: 6306 mean_circ: 0.948768
Ran for 191550 frames Cell Events: 6356 mean_circ: 0.948763
Ran for 192050 frames Cell Events: 6372 mean_circ: 0.948783
Ran for 193050 frames Cell Events: 6412 mean_circ: 0.948759
Ran for 193550 frames Cell Events: 6427 mean_circ: 0.948713
Ran for 194550 frames Cell Events: 6471 mean_circ: 0.948723
Ran for 195050 frames Cell Events: 6483 mean_circ: 0.948712
Ran for 195550 frames Cell Events: 6500 mean_circ: 0.948732
Ran for 196050 frames Cell Events: 6512 mean_circ: 0.948746
Ran for 196550 frames Cell Events: 6532 mean_circ: 0.948686
Ran for 197050 frames Cell Events: 6548 mean_circ: 0.948662
Ran for 198550 frames Cell Events: 6592 mean_circ: 0.948689
Ran for 200050 frames Cell Events: 6638 mean_circ: 0.94866
Ran for 201050 frames Cell Events: 6669 mean_circ: 0.948645
Ran for 201550 frames Cell Events: 6689 mean_circ: 0.948656
Ran for 202050 frames Cell Events: 6707 mean_circ: 0.948659
Ran for 202550 frames Cell Events: 6725 mean_circ: 0.948682
Ran for 203050 frames Cell Events: 6739 mean_circ: 0.948689
Ran for 204050 frames Cell Events: 6771 mean_circ: 0.94867
Ran for 204550 frames Cell Events: 6791 mean_circ: 0.948696
Ran for 205550 frames Cell Events: 6835 mean_circ: 0.948693
Ran for 206050 frames Cell Events: 6851 mean_circ: 0.948677
Ran for 207050 frames Cell Events: 6892 mean_circ: 0.948697
Ran for 207550 frames Cell Events: 6915 mean_circ: 0.94869
Ran for 208050 frames Cell Events: 6935 mean_circ: 0.948733
Ran for 208550 frames Cell Events: 6954 mean_circ: 0.948735
Ran for 209050 frames Cell Events: 6980 mean_circ: 0.948759
Ran for 210050 frames Cell Events: 7016 mean_circ: 0.948676
Ran for 211550 frames Cell Events: 7080 mean_circ: 0.948687
Ran for 212050 frames Cell Events: 7098 mean_circ: 0.948678
Ran for 212550 frames Cell Events: 7111 mean_circ: 0.948693
Ran for 213050 frames Cell Events: 7134 mean_circ: 0.948656
Ran for 213550 frames Cell Events: 7150 mean_circ: 0.94867
Ran for 214050 frames Cell Events: 7162 mean_circ: 0.948678
Ran for 215050 frames Cell Events: 7207 mean_circ: 0.948676
Ran for 215550 frames Cell Events: 7230 mean_circ: 0.948664
Ran for 216050 frames Cell Events: 7248 mean_circ: 0.948675
Ran for 216550 frames Cell Events: 7263 mean_circ: 0.948659
Ran for 217050 frames Cell Events: 7278 mean_circ: 0.948657
Ran for 217550 frames Cell Events: 7300 mean_circ: 0.948683
Ran for 218050 frames Cell Events: 7320 mean_circ: 0.948657
Ran for 218550 frames Cell Events: 7330 mean_circ: 0.948644
Ran for 219050 frames Cell Events: 7350 mean_circ: 0.948674
Ran for 219550 frames Cell Events: 7369 mean_circ: 0.948667
Ran for 220550 frames Cell Events: 7416 mean_circ: 0.94871
Ran for 221050 frames Cell Events: 7433 mean_circ: 0.948727
Ran for 221550 frames Cell Events: 7451 mean_circ: 0.948725
Ran for 222050 frames Cell Events: 7467 mean_circ: 0.948665
Ran for 222550 frames Cell Events: 7483 mean_circ: 0.948646
Ran for 223050 frames Cell Events: 7497 mean_circ: 0.948649
Ran for 223550 frames Cell Events: 7508 mean_circ: 0.948642
Ran for 224550 frames Cell Events: 7558 mean_circ: 0.948586
Ran for 225550 frames Cell Events: 7606 mean_circ: 0.948584
Ran for 227050 frames Cell Events: 7633 mean_circ: 0.948612
Ran for 228050 frames Cell Events: 7675 mean_circ: 0.948575
Ran for 228550 frames Cell Events: 7708 mean_circ: 0.948578
Ran for 229050 frames Cell Events: 7723 mean_circ: 0.948603
Ran for 229550 frames Cell Events: 7742 mean_circ: 0.948588
Ran for 230550 frames Cell Events: 7757 mean_circ: 0.948588
Ran for 231050 frames Cell Events: 7766 mean_circ: 0.948557
Ran for 232050 frames Cell Events: 7799 mean_circ: 0.948577
Ran for 233050 frames Cell Events: 7831 mean_circ: 0.948589
Ran for 233550 frames Cell Events: 7849 mean_circ: 0.948557
Ran for 235550 frames Cell Events: 7908 mean_circ: 0.948484
Ran for 237550 frames Cell Events: 7982 mean_circ: 0.948469
Ran for 238050 frames Cell Events: 7995 mean_circ: 0.948466
Ran for 238550 frames Cell Events: 8014 mean_circ: 0.948499
Ran for 239050 frames Cell Events: 8040 mean_circ: 0.948446
Ran for 239550 frames Cell Events: 8060 mean_circ: 0.948441
Ran for 240550 frames Cell Events: 8096 mean_circ: 0.948412
Ran for 241050 frames Cell Events: 8110 mean_circ: 0.948414
Ran for 241550 frames Cell Events: 8121 mean_circ: 0.948414
Ran for 242050 frames Cell Events: 8138 mean_circ: 0.948412
Ran for 242550 frames Cell Events: 8155 mean_circ: 0.948403
Ran for 243550 frames Cell Events: 8195 mean_circ: 0.94837



End this measurment..



Stopping time: 2.37149e+009
****************************************
Measurement finished

Mean Circularitiy: 0.948392
Mean Area: 616.877
Mean FL-1 intensity: 4308.17
Mean FL-2 intensity: 5055.21
Mean FL-3 intensity: 0

frames processed: 238148
Total Time: 121871ms
Number of Runs (new bg img) 0
Frames collected: 243616
Skipped frames: 73095
Rescued Frames: 6375141
Samples DAQ: 60904062
Samples written: 121808068
Samples per Channel: 60904034
FPS: 1998.97

Samples per second: 499742
Expected samples/s: 500000

Events: 8195
Events per second: 67.2433
jumped back (PMT): 6112
#Frames read, frequency
# 0 frames :330324
# 1 frames :139961
# 2 frames :5164
# 3 frames :1364
# 4 frames :801
# 5 frames :298
# 6 frames :3070
# 7 frames :1894
# 8 frames :1299
# 9 frames :812
# 10 frames :562
# 11 frames :319
# 12 frames :309
# 13 frames :187
# 14 frames :222
# 15 frames :173
# 16 frames :108
# 17 frames :61
# 18 frames :50
# 19 frames :34
# 20 frames :36
# 21 frames :33
# 22 frames :26
# 23 frames :15
# 24 frames :18
# 25 frames :6
# 26 frames :9
# 27 frames :5
# 28 frames :10
# 29 frames :6
# 30 frames :1
# 31 frames :3
# 32 frames :3
# 33 frames :3
# 35 frames :1
# 36 frames :1
# 37 frames :2
# 41 frames :1
# 42 frames :1
# 43 frames :2
# 46 frames :1
# 94 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.2566
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0