Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_16.24.10 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "df9483b05af400aaf270c3373a7088ed",
"name": "M1_20170611_1909_dsRNA_Q2_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "14:24:34"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10000 (max 10001) in
'10000'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.2627
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.37158e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 12 mean_circ: 0.910941
Ran for 1050 frames Cell Events: 32 mean_circ: 0.93403
Ran for 1550 frames Cell Events: 51 mean_circ: 0.930698
Ran for 2550 frames Cell Events: 62 mean_circ: 0.931976
Ran for 3050 frames Cell Events: 72 mean_circ: 0.932621
Ran for 3550 frames Cell Events: 90 mean_circ: 0.932328
Ran for 4050 frames Cell Events: 100 mean_circ: 0.932744
Ran for 4550 frames Cell Events: 114 mean_circ: 0.935515
Ran for 5050 frames Cell Events: 132 mean_circ: 0.936014
Ran for 6050 frames Cell Events: 169 mean_circ: 0.936918
Ran for 7050 frames Cell Events: 201 mean_circ: 0.937747
Ran for 7550 frames Cell Events: 214 mean_circ: 0.93861
Ran for 8050 frames Cell Events: 229 mean_circ: 0.93971
Ran for 8550 frames Cell Events: 241 mean_circ: 0.939434
Ran for 9050 frames Cell Events: 268 mean_circ: 0.939023
Ran for 9550 frames Cell Events: 283 mean_circ: 0.938427
Ran for 11050 frames Cell Events: 346 mean_circ: 0.936973
Ran for 11550 frames Cell Events: 359 mean_circ: 0.935946
Ran for 12050 frames Cell Events: 379 mean_circ: 0.936054
Ran for 12550 frames Cell Events: 398 mean_circ: 0.935828
Ran for 13550 frames Cell Events: 437 mean_circ: 0.935136
Ran for 14050 frames Cell Events: 451 mean_circ: 0.935303
Ran for 14550 frames Cell Events: 474 mean_circ: 0.935116
Ran for 15050 frames Cell Events: 497 mean_circ: 0.935584
Ran for 15550 frames Cell Events: 513 mean_circ: 0.93576
Ran for 16550 frames Cell Events: 550 mean_circ: 0.936201
Ran for 18050 frames Cell Events: 610 mean_circ: 0.936348
Ran for 18550 frames Cell Events: 620 mean_circ: 0.936499
Ran for 19050 frames Cell Events: 638 mean_circ: 0.936881
Ran for 19550 frames Cell Events: 653 mean_circ: 0.937053
Ran for 20050 frames Cell Events: 676 mean_circ: 0.937299
Ran for 20550 frames Cell Events: 690 mean_circ: 0.937237
Ran for 21050 frames Cell Events: 704 mean_circ: 0.937572
Ran for 21550 frames Cell Events: 714 mean_circ: 0.937257
Ran for 22050 frames Cell Events: 736 mean_circ: 0.937583
Ran for 22550 frames Cell Events: 756 mean_circ: 0.937831
Ran for 23050 frames Cell Events: 772 mean_circ: 0.937991
Ran for 24050 frames Cell Events: 811 mean_circ: 0.938571
Ran for 25050 frames Cell Events: 842 mean_circ: 0.939037
Ran for 25550 frames Cell Events: 860 mean_circ: 0.938754
Ran for 26050 frames Cell Events: 884 mean_circ: 0.938614
Ran for 26550 frames Cell Events: 901 mean_circ: 0.938045
Ran for 27050 frames Cell Events: 931 mean_circ: 0.937327
Ran for 28050 frames Cell Events: 974 mean_circ: 0.93728
Ran for 28550 frames Cell Events: 996 mean_circ: 0.937182
Ran for 29050 frames Cell Events: 1013 mean_circ: 0.936835
Ran for 30050 frames Cell Events: 1051 mean_circ: 0.937044
Ran for 30550 frames Cell Events: 1067 mean_circ: 0.937238
Ran for 31050 frames Cell Events: 1084 mean_circ: 0.937025
Ran for 32050 frames Cell Events: 1121 mean_circ: 0.937213
Ran for 33050 frames Cell Events: 1155 mean_circ: 0.937407
Ran for 34050 frames Cell Events: 1193 mean_circ: 0.937662
Ran for 35550 frames Cell Events: 1251 mean_circ: 0.938131
Ran for 36050 frames Cell Events: 1272 mean_circ: 0.938211
Ran for 36550 frames Cell Events: 1285 mean_circ: 0.938255
Ran for 37550 frames Cell Events: 1323 mean_circ: 0.938478
Ran for 39050 frames Cell Events: 1375 mean_circ: 0.938283
Ran for 39550 frames Cell Events: 1393 mean_circ: 0.938384
Ran for 40050 frames Cell Events: 1409 mean_circ: 0.938261
Ran for 40550 frames Cell Events: 1426 mean_circ: 0.938257
Ran for 41050 frames Cell Events: 1458 mean_circ: 0.938185
Ran for 41550 frames Cell Events: 1474 mean_circ: 0.938163
Ran for 42550 frames Cell Events: 1498 mean_circ: 0.938066
Ran for 43550 frames Cell Events: 1527 mean_circ: 0.937693
Ran for 44050 frames Cell Events: 1544 mean_circ: 0.937701
Ran for 45550 frames Cell Events: 1597 mean_circ: 0.937651
Ran for 46050 frames Cell Events: 1611 mean_circ: 0.937658
Ran for 47050 frames Cell Events: 1646 mean_circ: 0.937783
Ran for 47550 frames Cell Events: 1669 mean_circ: 0.937797
Ran for 48050 frames Cell Events: 1685 mean_circ: 0.937796
Ran for 48550 frames Cell Events: 1703 mean_circ: 0.937822
Ran for 49050 frames Cell Events: 1715 mean_circ: 0.937733
Ran for 49550 frames Cell Events: 1737 mean_circ: 0.937961
Ran for 50050 frames Cell Events: 1744 mean_circ: 0.937952
Ran for 50550 frames Cell Events: 1753 mean_circ: 0.937979
Ran for 51050 frames Cell Events: 1768 mean_circ: 0.938079
Ran for 52050 frames Cell Events: 1809 mean_circ: 0.938058
Ran for 53050 frames Cell Events: 1841 mean_circ: 0.938153
Ran for 53550 frames Cell Events: 1862 mean_circ: 0.938278
Ran for 54050 frames Cell Events: 1885 mean_circ: 0.938239
Ran for 55550 frames Cell Events: 1925 mean_circ: 0.938316
Ran for 57050 frames Cell Events: 1974 mean_circ: 0.938432
Ran for 57550 frames Cell Events: 1986 mean_circ: 0.938434
Ran for 58050 frames Cell Events: 2011 mean_circ: 0.938323
Ran for 58550 frames Cell Events: 2024 mean_circ: 0.938263
Ran for 59050 frames Cell Events: 2042 mean_circ: 0.93828
Ran for 59550 frames Cell Events: 2053 mean_circ: 0.938292
Ran for 60550 frames Cell Events: 2085 mean_circ: 0.938262
Ran for 61550 frames Cell Events: 2125 mean_circ: 0.93814
Ran for 63050 frames Cell Events: 2185 mean_circ: 0.937941
Ran for 64050 frames Cell Events: 2223 mean_circ: 0.937998
Ran for 64550 frames Cell Events: 2235 mean_circ: 0.937995
Ran for 65050 frames Cell Events: 2250 mean_circ: 0.938027
Ran for 65550 frames Cell Events: 2274 mean_circ: 0.937988
Ran for 66050 frames Cell Events: 2292 mean_circ: 0.93787
Ran for 66550 frames Cell Events: 2308 mean_circ: 0.937913
Ran for 67050 frames Cell Events: 2329 mean_circ: 0.938023
Ran for 67550 frames Cell Events: 2342 mean_circ: 0.938073
Ran for 68050 frames Cell Events: 2357 mean_circ: 0.93819
Ran for 68550 frames Cell Events: 2367 mean_circ: 0.937941
Ran for 69050 frames Cell Events: 2376 mean_circ: 0.937937
Ran for 69550 frames Cell Events: 2385 mean_circ: 0.937938
Ran for 70550 frames Cell Events: 2412 mean_circ: 0.937839
Ran for 71050 frames Cell Events: 2431 mean_circ: 0.937913
Ran for 71550 frames Cell Events: 2446 mean_circ: 0.937974
Ran for 72050 frames Cell Events: 2470 mean_circ: 0.938092
Ran for 72550 frames Cell Events: 2478 mean_circ: 0.938137
Ran for 73050 frames Cell Events: 2501 mean_circ: 0.938184
Ran for 73550 frames Cell Events: 2518 mean_circ: 0.938249
Ran for 74050 frames Cell Events: 2530 mean_circ: 0.938308
Ran for 74550 frames Cell Events: 2557 mean_circ: 0.93835
Ran for 75050 frames Cell Events: 2580 mean_circ: 0.938413
Ran for 75550 frames Cell Events: 2602 mean_circ: 0.938265
Ran for 76050 frames Cell Events: 2621 mean_circ: 0.938113
Ran for 76550 frames Cell Events: 2637 mean_circ: 0.938155
Ran for 77050 frames Cell Events: 2659 mean_circ: 0.938163
Ran for 77550 frames Cell Events: 2676 mean_circ: 0.938154
Ran for 78550 frames Cell Events: 2710 mean_circ: 0.938073
Ran for 79050 frames Cell Events: 2726 mean_circ: 0.938046
Ran for 79550 frames Cell Events: 2743 mean_circ: 0.938046
Ran for 80050 frames Cell Events: 2748 mean_circ: 0.938045
Ran for 81550 frames Cell Events: 2796 mean_circ: 0.937963
Ran for 82050 frames Cell Events: 2812 mean_circ: 0.937903
Ran for 82550 frames Cell Events: 2826 mean_circ: 0.937926
Ran for 83550 frames Cell Events: 2873 mean_circ: 0.937987
Ran for 84050 frames Cell Events: 2892 mean_circ: 0.938028
Ran for 85550 frames Cell Events: 2942 mean_circ: 0.938074
Ran for 86050 frames Cell Events: 2962 mean_circ: 0.938064
Ran for 86550 frames Cell Events: 2982 mean_circ: 0.938115
Ran for 87050 frames Cell Events: 3001 mean_circ: 0.938049
Ran for 87550 frames Cell Events: 3016 mean_circ: 0.938127
Ran for 88550 frames Cell Events: 3045 mean_circ: 0.938119
Ran for 90050 frames Cell Events: 3097 mean_circ: 0.937972
Ran for 90550 frames Cell Events: 3111 mean_circ: 0.93799
Ran for 91050 frames Cell Events: 3128 mean_circ: 0.937988
Ran for 91550 frames Cell Events: 3151 mean_circ: 0.938069
Ran for 92550 frames Cell Events: 3184 mean_circ: 0.938158
Ran for 93050 frames Cell Events: 3200 mean_circ: 0.938206
Ran for 93550 frames Cell Events: 3222 mean_circ: 0.938229
Ran for 96550 frames Cell Events: 3333 mean_circ: 0.938142
Ran for 97550 frames Cell Events: 3381 mean_circ: 0.938093
Ran for 98050 frames Cell Events: 3403 mean_circ: 0.938137
Ran for 98550 frames Cell Events: 3422 mean_circ: 0.938125
Ran for 99050 frames Cell Events: 3433 mean_circ: 0.938001
Ran for 99550 frames Cell Events: 3453 mean_circ: 0.938048
Ran for 100050 frames Cell Events: 3471 mean_circ: 0.937964
Ran for 100550 frames Cell Events: 3482 mean_circ: 0.937986
Ran for 101050 frames Cell Events: 3503 mean_circ: 0.937941
Ran for 101550 frames Cell Events: 3534 mean_circ: 0.937904
Ran for 102050 frames Cell Events: 3547 mean_circ: 0.937946
Ran for 102550 frames Cell Events: 3558 mean_circ: 0.937988
Ran for 103050 frames Cell Events: 3581 mean_circ: 0.938027
Ran for 103550 frames Cell Events: 3602 mean_circ: 0.938001
Ran for 104050 frames Cell Events: 3624 mean_circ: 0.938023
Ran for 104550 frames Cell Events: 3648 mean_circ: 0.937977
Ran for 105050 frames Cell Events: 3679 mean_circ: 0.93798
Ran for 105550 frames Cell Events: 3694 mean_circ: 0.937975
Ran for 106050 frames Cell Events: 3712 mean_circ: 0.937937
Ran for 107050 frames Cell Events: 3746 mean_circ: 0.937902
Ran for 107550 frames Cell Events: 3757 mean_circ: 0.937927
Ran for 108050 frames Cell Events: 3771 mean_circ: 0.937862
Ran for 108550 frames Cell Events: 3788 mean_circ: 0.937958
Ran for 109550 frames Cell Events: 3825 mean_circ: 0.93798
Ran for 110050 frames Cell Events: 3846 mean_circ: 0.938003
Ran for 111050 frames Cell Events: 3885 mean_circ: 0.938124
Ran for 111550 frames Cell Events: 3898 mean_circ: 0.938142
Ran for 112050 frames Cell Events: 3911 mean_circ: 0.938176
Ran for 112550 frames Cell Events: 3924 mean_circ: 0.938131
Ran for 113050 frames Cell Events: 3935 mean_circ: 0.93815
Ran for 113550 frames Cell Events: 3948 mean_circ: 0.938134
Ran for 115550 frames Cell Events: 4019 mean_circ: 0.938091
Ran for 116050 frames Cell Events: 4038 mean_circ: 0.938159
Ran for 116550 frames Cell Events: 4067 mean_circ: 0.938133
Ran for 117050 frames Cell Events: 4099 mean_circ: 0.938024
Ran for 119050 frames Cell Events: 4165 mean_circ: 0.93799
Ran for 119550 frames Cell Events: 4176 mean_circ: 0.938019
Ran for 120050 frames Cell Events: 4192 mean_circ: 0.937953
Ran for 120550 frames Cell Events: 4212 mean_circ: 0.937876
Ran for 121050 frames Cell Events: 4227 mean_circ: 0.937873
Ran for 121550 frames Cell Events: 4247 mean_circ: 0.937891
Ran for 122050 frames Cell Events: 4257 mean_circ: 0.937906
Ran for 123050 frames Cell Events: 4287 mean_circ: 0.937821
Ran for 123550 frames Cell Events: 4304 mean_circ: 0.937803
Ran for 124050 frames Cell Events: 4314 mean_circ: 0.937843
Ran for 125050 frames Cell Events: 4348 mean_circ: 0.937882
Ran for 126050 frames Cell Events: 4379 mean_circ: 0.937865
Ran for 126550 frames Cell Events: 4395 mean_circ: 0.937863
Ran for 127050 frames Cell Events: 4415 mean_circ: 0.937821
Ran for 128050 frames Cell Events: 4445 mean_circ: 0.937902
Ran for 128550 frames Cell Events: 4461 mean_circ: 0.937808
Ran for 129550 frames Cell Events: 4506 mean_circ: 0.937886
Ran for 131050 frames Cell Events: 4555 mean_circ: 0.937846
Ran for 131550 frames Cell Events: 4575 mean_circ: 0.937873
Ran for 132050 frames Cell Events: 4589 mean_circ: 0.93783
Ran for 132550 frames Cell Events: 4611 mean_circ: 0.937893
Ran for 133050 frames Cell Events: 4632 mean_circ: 0.937866
Ran for 133550 frames Cell Events: 4655 mean_circ: 0.937923
Ran for 135550 frames Cell Events: 4756 mean_circ: 0.937925
Ran for 136050 frames Cell Events: 4774 mean_circ: 0.937919
Ran for 136550 frames Cell Events: 4787 mean_circ: 0.937895
Ran for 137050 frames Cell Events: 4804 mean_circ: 0.937895
Ran for 137550 frames Cell Events: 4823 mean_circ: 0.937907
Ran for 138050 frames Cell Events: 4844 mean_circ: 0.93785
Ran for 138550 frames Cell Events: 4858 mean_circ: 0.937882
Ran for 140050 frames Cell Events: 4906 mean_circ: 0.937945
Ran for 140550 frames Cell Events: 4930 mean_circ: 0.937932
Ran for 141050 frames Cell Events: 4947 mean_circ: 0.937922
Ran for 141550 frames Cell Events: 4972 mean_circ: 0.937876
Ran for 143550 frames Cell Events: 5046 mean_circ: 0.937892
Ran for 144550 frames Cell Events: 5071 mean_circ: 0.937846
Ran for 145550 frames Cell Events: 5095 mean_circ: 0.937892
Ran for 146550 frames Cell Events: 5143 mean_circ: 0.937903
Ran for 147050 frames Cell Events: 5164 mean_circ: 0.937961
Ran for 147550 frames Cell Events: 5175 mean_circ: 0.937929
Ran for 148050 frames Cell Events: 5193 mean_circ: 0.937937
Ran for 148550 frames Cell Events: 5215 mean_circ: 0.937927
Ran for 149050 frames Cell Events: 5232 mean_circ: 0.937907
Ran for 149550 frames Cell Events: 5253 mean_circ: 0.937882
Ran for 150050 frames Cell Events: 5269 mean_circ: 0.937837
Ran for 150550 frames Cell Events: 5285 mean_circ: 0.937836
Ran for 151550 frames Cell Events: 5337 mean_circ: 0.937786
Ran for 152050 frames Cell Events: 5366 mean_circ: 0.937822
Ran for 153050 frames Cell Events: 5393 mean_circ: 0.937836
Ran for 153550 frames Cell Events: 5412 mean_circ: 0.937863
Ran for 154050 frames Cell Events: 5423 mean_circ: 0.937814
Ran for 155050 frames Cell Events: 5456 mean_circ: 0.937759
Ran for 155550 frames Cell Events: 5475 mean_circ: 0.937781
Ran for 156050 frames Cell Events: 5487 mean_circ: 0.937779
Ran for 156550 frames Cell Events: 5502 mean_circ: 0.93778
Ran for 157050 frames Cell Events: 5519 mean_circ: 0.937674
Ran for 157550 frames Cell Events: 5532 mean_circ: 0.937672
Ran for 158550 frames Cell Events: 5565 mean_circ: 0.937614
Ran for 159050 frames Cell Events: 5581 mean_circ: 0.93758
Ran for 159550 frames Cell Events: 5604 mean_circ: 0.937556
Ran for 160050 frames Cell Events: 5623 mean_circ: 0.937523
Ran for 160550 frames Cell Events: 5633 mean_circ: 0.937517
Ran for 161050 frames Cell Events: 5657 mean_circ: 0.937528
Ran for 161550 frames Cell Events: 5686 mean_circ: 0.937554
Ran for 162050 frames Cell Events: 5708 mean_circ: 0.937521
Ran for 162550 frames Cell Events: 5735 mean_circ: 0.937467
Ran for 163050 frames Cell Events: 5748 mean_circ: 0.937414
Ran for 163550 frames Cell Events: 5757 mean_circ: 0.937406
Ran for 164050 frames Cell Events: 5773 mean_circ: 0.93743
Ran for 165050 frames Cell Events: 5815 mean_circ: 0.937478
Ran for 165550 frames Cell Events: 5832 mean_circ: 0.937477
Ran for 166550 frames Cell Events: 5865 mean_circ: 0.93749
Ran for 167050 frames Cell Events: 5889 mean_circ: 0.93751
Ran for 168050 frames Cell Events: 5930 mean_circ: 0.937505
Ran for 169050 frames Cell Events: 5976 mean_circ: 0.937553
Ran for 169550 frames Cell Events: 5993 mean_circ: 0.937508
Ran for 170550 frames Cell Events: 6041 mean_circ: 0.937459
Ran for 171050 frames Cell Events: 6052 mean_circ: 0.937469
Ran for 171550 frames Cell Events: 6086 mean_circ: 0.937468
Ran for 172050 frames Cell Events: 6097 mean_circ: 0.937482
Ran for 172550 frames Cell Events: 6108 mean_circ: 0.93751
Ran for 173050 frames Cell Events: 6121 mean_circ: 0.93751
Ran for 173550 frames Cell Events: 6147 mean_circ: 0.937439
Ran for 174050 frames Cell Events: 6163 mean_circ: 0.93746
Ran for 174550 frames Cell Events: 6181 mean_circ: 0.937467
Ran for 175050 frames Cell Events: 6196 mean_circ: 0.937448
Ran for 175550 frames Cell Events: 6218 mean_circ: 0.937361
Ran for 176050 frames Cell Events: 6228 mean_circ: 0.937358
Ran for 176550 frames Cell Events: 6237 mean_circ: 0.937381
Ran for 177050 frames Cell Events: 6257 mean_circ: 0.937376
Ran for 177550 frames Cell Events: 6266 mean_circ: 0.937391
Ran for 178050 frames Cell Events: 6286 mean_circ: 0.937364
Ran for 178550 frames Cell Events: 6308 mean_circ: 0.937352
Ran for 179050 frames Cell Events: 6319 mean_circ: 0.937316
Ran for 180050 frames Cell Events: 6355 mean_circ: 0.937355
Ran for 180550 frames Cell Events: 6378 mean_circ: 0.937324
Ran for 181050 frames Cell Events: 6402 mean_circ: 0.937304
Ran for 182050 frames Cell Events: 6446 mean_circ: 0.937226
Ran for 182550 frames Cell Events: 6459 mean_circ: 0.937208
Ran for 183050 frames Cell Events: 6468 mean_circ: 0.937212
Ran for 183550 frames Cell Events: 6484 mean_circ: 0.937168
Ran for 184550 frames Cell Events: 6522 mean_circ: 0.937136
Ran for 185050 frames Cell Events: 6544 mean_circ: 0.937119
Ran for 185550 frames Cell Events: 6561 mean_circ: 0.937149
Ran for 186050 frames Cell Events: 6590 mean_circ: 0.937145
Ran for 188050 frames Cell Events: 6702 mean_circ: 0.937264
Ran for 188550 frames Cell Events: 6721 mean_circ: 0.937262
Ran for 189550 frames Cell Events: 6757 mean_circ: 0.937259
Ran for 190550 frames Cell Events: 6803 mean_circ: 0.937215
Ran for 191050 frames Cell Events: 6812 mean_circ: 0.937228
Ran for 191550 frames Cell Events: 6838 mean_circ: 0.937287
Ran for 192050 frames Cell Events: 6856 mean_circ: 0.937269
Ran for 192550 frames Cell Events: 6870 mean_circ: 0.937274
Ran for 193050 frames Cell Events: 6903 mean_circ: 0.937307
Ran for 193550 frames Cell Events: 6923 mean_circ: 0.93731
Ran for 194550 frames Cell Events: 6963 mean_circ: 0.937246
Ran for 195050 frames Cell Events: 6981 mean_circ: 0.937258
Ran for 195550 frames Cell Events: 6997 mean_circ: 0.93727
Ran for 196050 frames Cell Events: 7023 mean_circ: 0.937312
Ran for 196550 frames Cell Events: 7038 mean_circ: 0.937317
Ran for 197050 frames Cell Events: 7048 mean_circ: 0.937321
Ran for 197550 frames Cell Events: 7062 mean_circ: 0.937294
Ran for 198050 frames Cell Events: 7080 mean_circ: 0.937315
Ran for 199550 frames Cell Events: 7151 mean_circ: 0.93729
Ran for 200050 frames Cell Events: 7171 mean_circ: 0.937319
Ran for 200550 frames Cell Events: 7184 mean_circ: 0.937321
Ran for 201050 frames Cell Events: 7199 mean_circ: 0.937297
Ran for 201550 frames Cell Events: 7214 mean_circ: 0.937287
Ran for 202050 frames Cell Events: 7230 mean_circ: 0.937303
Ran for 202550 frames Cell Events: 7243 mean_circ: 0.937247
Ran for 203550 frames Cell Events: 7286 mean_circ: 0.937199
Ran for 204550 frames Cell Events: 7321 mean_circ: 0.937245
Ran for 205550 frames Cell Events: 7369 mean_circ: 0.937261
Ran for 206050 frames Cell Events: 7384 mean_circ: 0.937273
Ran for 206550 frames Cell Events: 7411 mean_circ: 0.937259
Ran for 207050 frames Cell Events: 7438 mean_circ: 0.937239
Ran for 207550 frames Cell Events: 7457 mean_circ: 0.937243
Ran for 208050 frames Cell Events: 7474 mean_circ: 0.937238
Ran for 208550 frames Cell Events: 7489 mean_circ: 0.937262
Ran for 209050 frames Cell Events: 7504 mean_circ: 0.937243
Ran for 210050 frames Cell Events: 7535 mean_circ: 0.937238
Ran for 211050 frames Cell Events: 7582 mean_circ: 0.937214
Ran for 212050 frames Cell Events: 7620 mean_circ: 0.937219
Ran for 212550 frames Cell Events: 7641 mean_circ: 0.937214
Ran for 213050 frames Cell Events: 7648 mean_circ: 0.937225
Ran for 214050 frames Cell Events: 7679 mean_circ: 0.93717
Ran for 214550 frames Cell Events: 7694 mean_circ: 0.937152
Ran for 215050 frames Cell Events: 7712 mean_circ: 0.937166
Ran for 215550 frames Cell Events: 7728 mean_circ: 0.937188
Ran for 216050 frames Cell Events: 7747 mean_circ: 0.937175
Ran for 217050 frames Cell Events: 7764 mean_circ: 0.937195
Ran for 217550 frames Cell Events: 7790 mean_circ: 0.937179
Ran for 218050 frames Cell Events: 7797 mean_circ: 0.93718
Ran for 218550 frames Cell Events: 7811 mean_circ: 0.937197
Ran for 219050 frames Cell Events: 7824 mean_circ: 0.937227
Ran for 219550 frames Cell Events: 7840 mean_circ: 0.937227
Ran for 220050 frames Cell Events: 7855 mean_circ: 0.937247
Ran for 220550 frames Cell Events: 7871 mean_circ: 0.93722
Ran for 221050 frames Cell Events: 7894 mean_circ: 0.937202
Ran for 222050 frames Cell Events: 7935 mean_circ: 0.937195
Ran for 222550 frames Cell Events: 7948 mean_circ: 0.937215
Ran for 223050 frames Cell Events: 7959 mean_circ: 0.937199
Ran for 224050 frames Cell Events: 7986 mean_circ: 0.937207
Ran for 225050 frames Cell Events: 8015 mean_circ: 0.937214
Ran for 225550 frames Cell Events: 8032 mean_circ: 0.937228
Ran for 226050 frames Cell Events: 8047 mean_circ: 0.937221
Ran for 226550 frames Cell Events: 8063 mean_circ: 0.937209
Ran for 227050 frames Cell Events: 8084 mean_circ: 0.937232
Ran for 227550 frames Cell Events: 8098 mean_circ: 0.937225
Ran for 228050 frames Cell Events: 8118 mean_circ: 0.937215
Ran for 228550 frames Cell Events: 8146 mean_circ: 0.937216
Ran for 229050 frames Cell Events: 8153 mean_circ: 0.937206
Ran for 229550 frames Cell Events: 8164 mean_circ: 0.937234
Ran for 230050 frames Cell Events: 8190 mean_circ: 0.937232
Ran for 230550 frames Cell Events: 8227 mean_circ: 0.937225
Ran for 231050 frames Cell Events: 8247 mean_circ: 0.937236
Ran for 231550 frames Cell Events: 8264 mean_circ: 0.937228
Ran for 232050 frames Cell Events: 8290 mean_circ: 0.937234
Ran for 232550 frames Cell Events: 8297 mean_circ: 0.937246
Ran for 233050 frames Cell Events: 8316 mean_circ: 0.937236
Ran for 233550 frames Cell Events: 8337 mean_circ: 0.937253
Ran for 234050 frames Cell Events: 8361 mean_circ: 0.937283
Ran for 234550 frames Cell Events: 8370 mean_circ: 0.937285
Ran for 235050 frames Cell Events: 8382 mean_circ: 0.93728
Ran for 235550 frames Cell Events: 8402 mean_circ: 0.937267
Ran for 236050 frames Cell Events: 8411 mean_circ: 0.937271
Ran for 237050 frames Cell Events: 8463 mean_circ: 0.937198
Ran for 238550 frames Cell Events: 8516 mean_circ: 0.937157
Ran for 239050 frames Cell Events: 8533 mean_circ: 0.937122
Ran for 239550 frames Cell Events: 8542 mean_circ: 0.937121
Ran for 240050 frames Cell Events: 8553 mean_circ: 0.937134
Ran for 240550 frames Cell Events: 8567 mean_circ: 0.937148
Ran for 241050 frames Cell Events: 8581 mean_circ: 0.937163
Ran for 241550 frames Cell Events: 8593 mean_circ: 0.937164
Ran for 242050 frames Cell Events: 8610 mean_circ: 0.937167
Ran for 242550 frames Cell Events: 8617 mean_circ: 0.937162
Ran for 243550 frames Cell Events: 8658 mean_circ: 0.937123
Ran for 244050 frames Cell Events: 8676 mean_circ: 0.937135
Ran for 244550 frames Cell Events: 8694 mean_circ: 0.937148
Ran for 245050 frames Cell Events: 8710 mean_circ: 0.937135
Ran for 245550 frames Cell Events: 8725 mean_circ: 0.937112
Ran for 246050 frames Cell Events: 8734 mean_circ: 0.93711
Ran for 246550 frames Cell Events: 8748 mean_circ: 0.937068
Ran for 247050 frames Cell Events: 8765 mean_circ: 0.937052
Ran for 247550 frames Cell Events: 8781 mean_circ: 0.937078
Ran for 248050 frames Cell Events: 8799 mean_circ: 0.93708
Ran for 248550 frames Cell Events: 8812 mean_circ: 0.937066
Ran for 249550 frames Cell Events: 8856 mean_circ: 0.937053
Ran for 250050 frames Cell Events: 8866 mean_circ: 0.93703
Ran for 251050 frames Cell Events: 8894 mean_circ: 0.937008
Ran for 252050 frames Cell Events: 8925 mean_circ: 0.937029
Ran for 252550 frames Cell Events: 8936 mean_circ: 0.937005
Ran for 255550 frames Cell Events: 9028 mean_circ: 0.937011
Ran for 256050 frames Cell Events: 9040 mean_circ: 0.93702
Ran for 257550 frames Cell Events: 9091 mean_circ: 0.937065
Ran for 258050 frames Cell Events: 9100 mean_circ: 0.937066
Ran for 259550 frames Cell Events: 9157 mean_circ: 0.937052
Ran for 261050 frames Cell Events: 9229 mean_circ: 0.937021
Ran for 261550 frames Cell Events: 9253 mean_circ: 0.936998
Ran for 262050 frames Cell Events: 9266 mean_circ: 0.937006
Ran for 263550 frames Cell Events: 9317 mean_circ: 0.937021
Ran for 264050 frames Cell Events: 9336 mean_circ: 0.937022
Ran for 265050 frames Cell Events: 9367 mean_circ: 0.937001
Ran for 265550 frames Cell Events: 9378 mean_circ: 0.936992
Ran for 266050 frames Cell Events: 9395 mean_circ: 0.937008
Ran for 267050 frames Cell Events: 9425 mean_circ: 0.936991
Ran for 267550 frames Cell Events: 9449 mean_circ: 0.937019
Ran for 268050 frames Cell Events: 9456 mean_circ: 0.937039
Ran for 268550 frames Cell Events: 9470 mean_circ: 0.937063
Ran for 269050 frames Cell Events: 9485 mean_circ: 0.937087
Ran for 269550 frames Cell Events: 9496 mean_circ: 0.937091
Ran for 270050 frames Cell Events: 9514 mean_circ: 0.937105
Ran for 272550 frames Cell Events: 9621 mean_circ: 0.937161
Ran for 274550 frames Cell Events: 9705 mean_circ: 0.937149
Ran for 276050 frames Cell Events: 9763 mean_circ: 0.937163
Ran for 277050 frames Cell Events: 9804 mean_circ: 0.937135
Ran for 277550 frames Cell Events: 9823 mean_circ: 0.93714
Ran for 278050 frames Cell Events: 9835 mean_circ: 0.937135
Ran for 278550 frames Cell Events: 9850 mean_circ: 0.937119
Ran for 279050 frames Cell Events: 9867 mean_circ: 0.937112
Ran for 280050 frames Cell Events: 9904 mean_circ: 0.937156
Ran for 280550 frames Cell Events: 9912 mean_circ: 0.937142
Ran for 281050 frames Cell Events: 9933 mean_circ: 0.937153
Ran for 281550 frames Cell Events: 9953 mean_circ: 0.937159
Ran for 282050 frames Cell Events: 9979 mean_circ: 0.937174
Ran for 282550 frames Cell Events: 9987 mean_circ: 0.937181



End this measurment.
because stop condition (time/nr of cells) was met

Stopping time: 2.37172e+009
****************************************
Measurement finished

Mean Circularitiy: 0.937183
Mean Area: 624.525
Mean FL-1 intensity: 4130.1
Mean FL-2 intensity: 5577.87
Mean FL-3 intensity: 0

frames processed: 282037
Total Time: 141468ms
Number of Runs (new bg img) 0
Frames collected: 282762
Skipped frames: 73820
Rescued Frames: 6475188
Samples DAQ: 70691981
Samples written: 141381010
Samples per Channel: 70690505
FPS: 1998.78

Samples per second: 499694
Expected samples/s: 500000

Events: 10001
Events per second: 70.6946
jumped back (PMT): 14
#Frames read, frequency
# 0 frames :383473
# 1 frames :161900
# 2 frames :5709
# 3 frames :1893
# 4 frames :824
# 5 frames :353
# 6 frames :3547
# 7 frames :2364
# 8 frames :1783
# 9 frames :894
# 10 frames :496
# 11 frames :370
# 12 frames :459
# 13 frames :307
# 14 frames :301
# 15 frames :188
# 16 frames :118
# 17 frames :81
# 18 frames :64
# 19 frames :66
# 20 frames :64
# 21 frames :35
# 22 frames :41
# 23 frames :19
# 24 frames :21
# 25 frames :17
# 26 frames :12
# 27 frames :12
# 28 frames :11
# 29 frames :8
# 30 frames :5
# 31 frames :5
# 32 frames :3
# 33 frames :1
# 34 frames :4
# 35 frames :4
# 36 frames :2
# 37 frames :1
# 38 frames :2
# 39 frames :1
# 40 frames :2
# 42 frames :1
# 44 frames :1
# 46 frames :1
# 52 frames :1
# 53 frames :1
# 64 frames :1
# 66 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.2627
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0