Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_18.41.40 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "8d6e3ef6c511987a5bd9ad880c52e18f",
"name": "M1_20170618_1427_dsRNA_Q2_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "16:42:02"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8820 (max 8822) in '8820'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.8714
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 3.86176e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 13 mean_circ: 0.884441
Ran for 2550 frames Cell Events: 75 mean_circ: 0.942748
Ran for 3050 frames Cell Events: 90 mean_circ: 0.945818
Ran for 4550 frames Cell Events: 136 mean_circ: 0.947817
Ran for 6050 frames Cell Events: 194 mean_circ: 0.948446
Ran for 6550 frames Cell Events: 201 mean_circ: 0.948893
Ran for 7050 frames Cell Events: 210 mean_circ: 0.948993
Ran for 7550 frames Cell Events: 224 mean_circ: 0.949236
Ran for 8050 frames Cell Events: 231 mean_circ: 0.949686
Ran for 9050 frames Cell Events: 256 mean_circ: 0.949711
Ran for 10050 frames Cell Events: 274 mean_circ: 0.94899
Ran for 11050 frames Cell Events: 301 mean_circ: 0.949928
Ran for 11550 frames Cell Events: 317 mean_circ: 0.950311
Ran for 12550 frames Cell Events: 341 mean_circ: 0.951211
Ran for 13050 frames Cell Events: 357 mean_circ: 0.949731
Ran for 13550 frames Cell Events: 376 mean_circ: 0.949784
Ran for 14050 frames Cell Events: 392 mean_circ: 0.949968
Ran for 14550 frames Cell Events: 399 mean_circ: 0.949616
Ran for 15050 frames Cell Events: 417 mean_circ: 0.950092
Ran for 15550 frames Cell Events: 422 mean_circ: 0.95038
Ran for 16050 frames Cell Events: 440 mean_circ: 0.950569
Ran for 16550 frames Cell Events: 451 mean_circ: 0.950488
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Ran for 23550 frames Cell Events: 650 mean_circ: 0.951835
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Ran for 35550 frames Cell Events: 1003 mean_circ: 0.952479
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Ran for 63050 frames Cell Events: 1757 mean_circ: 0.952181
Ran for 63550 frames Cell Events: 1776 mean_circ: 0.952134
Ran for 64550 frames Cell Events: 1798 mean_circ: 0.952082
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Ran for 67050 frames Cell Events: 1847 mean_circ: 0.951888
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Ran for 68050 frames Cell Events: 1864 mean_circ: 0.951916
Ran for 68550 frames Cell Events: 1878 mean_circ: 0.951926
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Ran for 70050 frames Cell Events: 1934 mean_circ: 0.951826
Ran for 71050 frames Cell Events: 1965 mean_circ: 0.951882
Ran for 71550 frames Cell Events: 1982 mean_circ: 0.951891
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Ran for 76550 frames Cell Events: 2089 mean_circ: 0.952008
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Ran for 79550 frames Cell Events: 2165 mean_circ: 0.951739
Ran for 80050 frames Cell Events: 2174 mean_circ: 0.951726
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Ran for 81550 frames Cell Events: 2222 mean_circ: 0.951694
Ran for 82050 frames Cell Events: 2230 mean_circ: 0.951666
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Ran for 83550 frames Cell Events: 2280 mean_circ: 0.951656
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Ran for 84550 frames Cell Events: 2293 mean_circ: 0.951737
Ran for 85050 frames Cell Events: 2313 mean_circ: 0.951779
Ran for 85550 frames Cell Events: 2329 mean_circ: 0.951818
Ran for 86050 frames Cell Events: 2337 mean_circ: 0.951811
Ran for 86550 frames Cell Events: 2350 mean_circ: 0.951882
Ran for 87050 frames Cell Events: 2368 mean_circ: 0.9519
Ran for 87550 frames Cell Events: 2386 mean_circ: 0.951904
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Ran for 88550 frames Cell Events: 2412 mean_circ: 0.952003
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Ran for 89550 frames Cell Events: 2446 mean_circ: 0.951906
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Ran for 91050 frames Cell Events: 2489 mean_circ: 0.951806
Ran for 91550 frames Cell Events: 2503 mean_circ: 0.951689
Ran for 92050 frames Cell Events: 2521 mean_circ: 0.951539
Ran for 92550 frames Cell Events: 2535 mean_circ: 0.951514
Ran for 93050 frames Cell Events: 2550 mean_circ: 0.951564
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Ran for 94050 frames Cell Events: 2581 mean_circ: 0.951572
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Ran for 96550 frames Cell Events: 2646 mean_circ: 0.951628
Ran for 97050 frames Cell Events: 2660 mean_circ: 0.951624
Ran for 97550 frames Cell Events: 2679 mean_circ: 0.951731
Ran for 98550 frames Cell Events: 2705 mean_circ: 0.95183
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Ran for 99550 frames Cell Events: 2724 mean_circ: 0.951785
Ran for 100050 frames Cell Events: 2735 mean_circ: 0.951813
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Ran for 102050 frames Cell Events: 2790 mean_circ: 0.951695
Ran for 102550 frames Cell Events: 2805 mean_circ: 0.951652
Ran for 103050 frames Cell Events: 2823 mean_circ: 0.951655
Ran for 103550 frames Cell Events: 2839 mean_circ: 0.951667
Ran for 104050 frames Cell Events: 2852 mean_circ: 0.951589
Ran for 105550 frames Cell Events: 2884 mean_circ: 0.951576
Ran for 106550 frames Cell Events: 2917 mean_circ: 0.951612
Ran for 107050 frames Cell Events: 2925 mean_circ: 0.951619
Ran for 107550 frames Cell Events: 2945 mean_circ: 0.951642
Ran for 108550 frames Cell Events: 2977 mean_circ: 0.951659
Ran for 109050 frames Cell Events: 2992 mean_circ: 0.951664
Ran for 110050 frames Cell Events: 3012 mean_circ: 0.951677
Ran for 110550 frames Cell Events: 3026 mean_circ: 0.951641
Ran for 111050 frames Cell Events: 3036 mean_circ: 0.951639
Ran for 111550 frames Cell Events: 3049 mean_circ: 0.951673
Ran for 112050 frames Cell Events: 3062 mean_circ: 0.951634
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Ran for 120050 frames Cell Events: 3271 mean_circ: 0.951693
Ran for 120550 frames Cell Events: 3288 mean_circ: 0.951635
Ran for 121050 frames Cell Events: 3303 mean_circ: 0.951699
Ran for 121550 frames Cell Events: 3317 mean_circ: 0.951621
Ran for 122050 frames Cell Events: 3332 mean_circ: 0.951674
Ran for 122550 frames Cell Events: 3345 mean_circ: 0.951648
Ran for 123550 frames Cell Events: 3362 mean_circ: 0.951706
Ran for 125050 frames Cell Events: 3401 mean_circ: 0.951718
Ran for 127050 frames Cell Events: 3475 mean_circ: 0.951854
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Ran for 129050 frames Cell Events: 3530 mean_circ: 0.951761
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Ran for 131050 frames Cell Events: 3572 mean_circ: 0.951837
Ran for 132050 frames Cell Events: 3596 mean_circ: 0.951836
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Ran for 142050 frames Cell Events: 3872 mean_circ: 0.951719
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Ran for 157050 frames Cell Events: 4282 mean_circ: 0.951857
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Ran for 162550 frames Cell Events: 4440 mean_circ: 0.951564
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Ran for 171050 frames Cell Events: 4706 mean_circ: 0.951488
Ran for 171550 frames Cell Events: 4729 mean_circ: 0.951455
Ran for 172050 frames Cell Events: 4742 mean_circ: 0.951446
Ran for 173050 frames Cell Events: 4772 mean_circ: 0.951473
Ran for 173550 frames Cell Events: 4787 mean_circ: 0.951502
Ran for 174050 frames Cell Events: 4804 mean_circ: 0.951519
Ran for 174550 frames Cell Events: 4812 mean_circ: 0.951507
Ran for 175050 frames Cell Events: 4824 mean_circ: 0.951514
Ran for 175550 frames Cell Events: 4841 mean_circ: 0.951486
Ran for 176050 frames Cell Events: 4855 mean_circ: 0.951481
Ran for 176550 frames Cell Events: 4866 mean_circ: 0.9515
Ran for 177550 frames Cell Events: 4895 mean_circ: 0.951494
Ran for 178050 frames Cell Events: 4910 mean_circ: 0.951525
Ran for 178550 frames Cell Events: 4930 mean_circ: 0.951536
Ran for 179050 frames Cell Events: 4941 mean_circ: 0.951564
Ran for 179550 frames Cell Events: 4957 mean_circ: 0.951573
Ran for 180050 frames Cell Events: 4972 mean_circ: 0.951557
Ran for 180550 frames Cell Events: 4981 mean_circ: 0.951521
Ran for 181550 frames Cell Events: 5008 mean_circ: 0.951491
Ran for 182050 frames Cell Events: 5023 mean_circ: 0.951458
Ran for 182550 frames Cell Events: 5039 mean_circ: 0.951461
Ran for 183050 frames Cell Events: 5071 mean_circ: 0.951431
Ran for 183550 frames Cell Events: 5086 mean_circ: 0.95144
Ran for 185050 frames Cell Events: 5130 mean_circ: 0.951454
Ran for 185550 frames Cell Events: 5143 mean_circ: 0.951434
Ran for 186050 frames Cell Events: 5158 mean_circ: 0.951453
Ran for 187050 frames Cell Events: 5184 mean_circ: 0.951415
Ran for 187550 frames Cell Events: 5196 mean_circ: 0.951438
Ran for 188050 frames Cell Events: 5211 mean_circ: 0.951471
Ran for 188550 frames Cell Events: 5226 mean_circ: 0.951469
Ran for 189050 frames Cell Events: 5237 mean_circ: 0.951489
Ran for 189550 frames Cell Events: 5252 mean_circ: 0.951507
Ran for 191050 frames Cell Events: 5307 mean_circ: 0.951501
Ran for 192050 frames Cell Events: 5335 mean_circ: 0.951507
Ran for 193050 frames Cell Events: 5374 mean_circ: 0.951508
Ran for 193550 frames Cell Events: 5390 mean_circ: 0.951525
Ran for 194050 frames Cell Events: 5408 mean_circ: 0.951564
Ran for 195550 frames Cell Events: 5453 mean_circ: 0.951525
Ran for 196050 frames Cell Events: 5467 mean_circ: 0.951496
Ran for 197050 frames Cell Events: 5497 mean_circ: 0.951522
Ran for 197550 frames Cell Events: 5508 mean_circ: 0.951538
Ran for 198050 frames Cell Events: 5525 mean_circ: 0.951536
Ran for 198550 frames Cell Events: 5539 mean_circ: 0.951516
Ran for 199050 frames Cell Events: 5555 mean_circ: 0.951525
Ran for 199550 frames Cell Events: 5562 mean_circ: 0.951533
Ran for 200050 frames Cell Events: 5573 mean_circ: 0.951535
Ran for 200550 frames Cell Events: 5592 mean_circ: 0.951572
Ran for 201050 frames Cell Events: 5605 mean_circ: 0.951578
Ran for 202050 frames Cell Events: 5632 mean_circ: 0.951562
Ran for 202550 frames Cell Events: 5641 mean_circ: 0.951573
Ran for 203050 frames Cell Events: 5656 mean_circ: 0.951535
Ran for 203550 frames Cell Events: 5671 mean_circ: 0.951464
Ran for 204050 frames Cell Events: 5693 mean_circ: 0.951462
Ran for 204550 frames Cell Events: 5705 mean_circ: 0.951472
Ran for 205050 frames Cell Events: 5727 mean_circ: 0.951484
Ran for 205550 frames Cell Events: 5736 mean_circ: 0.951481
Ran for 206050 frames Cell Events: 5745 mean_circ: 0.951453
Ran for 207050 frames Cell Events: 5771 mean_circ: 0.951365
Ran for 207550 frames Cell Events: 5787 mean_circ: 0.951384
Ran for 208050 frames Cell Events: 5802 mean_circ: 0.951354
Ran for 208550 frames Cell Events: 5808 mean_circ: 0.951332
Ran for 209050 frames Cell Events: 5825 mean_circ: 0.951341
Ran for 210550 frames Cell Events: 5868 mean_circ: 0.951332
Ran for 211550 frames Cell Events: 5905 mean_circ: 0.951293
Ran for 212050 frames Cell Events: 5917 mean_circ: 0.951294
Ran for 212550 frames Cell Events: 5935 mean_circ: 0.951288
Ran for 213050 frames Cell Events: 5952 mean_circ: 0.951292
Ran for 214050 frames Cell Events: 5964 mean_circ: 0.951309
Ran for 214550 frames Cell Events: 5973 mean_circ: 0.951318
Ran for 215550 frames Cell Events: 6011 mean_circ: 0.951305
Ran for 216050 frames Cell Events: 6025 mean_circ: 0.951324
Ran for 216550 frames Cell Events: 6036 mean_circ: 0.951301
Ran for 218550 frames Cell Events: 6103 mean_circ: 0.951236
Ran for 219550 frames Cell Events: 6140 mean_circ: 0.951251
Ran for 220050 frames Cell Events: 6156 mean_circ: 0.951271
Ran for 220550 frames Cell Events: 6163 mean_circ: 0.951274
Ran for 221050 frames Cell Events: 6175 mean_circ: 0.951244
Ran for 221550 frames Cell Events: 6194 mean_circ: 0.951278
Ran for 222050 frames Cell Events: 6210 mean_circ: 0.951271
Ran for 222550 frames Cell Events: 6233 mean_circ: 0.951286
Ran for 223050 frames Cell Events: 6250 mean_circ: 0.951265
Ran for 223550 frames Cell Events: 6266 mean_circ: 0.951282
Ran for 224550 frames Cell Events: 6291 mean_circ: 0.951337
Ran for 225050 frames Cell Events: 6309 mean_circ: 0.951347
Ran for 227550 frames Cell Events: 6404 mean_circ: 0.951416
Ran for 228050 frames Cell Events: 6420 mean_circ: 0.951403
Ran for 229050 frames Cell Events: 6429 mean_circ: 0.951384
Ran for 229550 frames Cell Events: 6446 mean_circ: 0.95137
Ran for 230050 frames Cell Events: 6453 mean_circ: 0.951349
Ran for 230550 frames Cell Events: 6473 mean_circ: 0.951317
Ran for 231550 frames Cell Events: 6504 mean_circ: 0.951303
Ran for 232050 frames Cell Events: 6512 mean_circ: 0.951296
Ran for 232550 frames Cell Events: 6521 mean_circ: 0.951261
Ran for 233550 frames Cell Events: 6548 mean_circ: 0.951244
Ran for 234050 frames Cell Events: 6564 mean_circ: 0.951239
Ran for 234550 frames Cell Events: 6584 mean_circ: 0.951232
Ran for 236050 frames Cell Events: 6611 mean_circ: 0.951225
Ran for 236550 frames Cell Events: 6633 mean_circ: 0.951254
Ran for 237550 frames Cell Events: 6665 mean_circ: 0.951267
Ran for 238050 frames Cell Events: 6679 mean_circ: 0.951286
Ran for 238550 frames Cell Events: 6692 mean_circ: 0.951311
Ran for 239050 frames Cell Events: 6703 mean_circ: 0.951322
Ran for 239550 frames Cell Events: 6722 mean_circ: 0.951307
Ran for 240050 frames Cell Events: 6735 mean_circ: 0.951315
Ran for 240550 frames Cell Events: 6749 mean_circ: 0.951329
Ran for 241050 frames Cell Events: 6760 mean_circ: 0.951341
Ran for 241550 frames Cell Events: 6774 mean_circ: 0.951344
Ran for 243050 frames Cell Events: 6820 mean_circ: 0.951396
Ran for 243550 frames Cell Events: 6836 mean_circ: 0.9514
Ran for 244050 frames Cell Events: 6848 mean_circ: 0.951417
Ran for 244550 frames Cell Events: 6864 mean_circ: 0.95142
Ran for 245050 frames Cell Events: 6874 mean_circ: 0.951399
Ran for 245550 frames Cell Events: 6896 mean_circ: 0.951369
Ran for 246050 frames Cell Events: 6910 mean_circ: 0.951394
Ran for 246550 frames Cell Events: 6930 mean_circ: 0.951403
Ran for 247050 frames Cell Events: 6945 mean_circ: 0.951401
Ran for 248050 frames Cell Events: 6962 mean_circ: 0.951354
Ran for 248550 frames Cell Events: 6978 mean_circ: 0.95135
Ran for 249050 frames Cell Events: 6990 mean_circ: 0.951371
Ran for 249550 frames Cell Events: 7004 mean_circ: 0.951362
Ran for 250050 frames Cell Events: 7018 mean_circ: 0.951378
Ran for 250550 frames Cell Events: 7032 mean_circ: 0.951399
Ran for 251050 frames Cell Events: 7046 mean_circ: 0.951384
Ran for 251550 frames Cell Events: 7064 mean_circ: 0.951401
Ran for 252050 frames Cell Events: 7075 mean_circ: 0.951419
Ran for 253550 frames Cell Events: 7121 mean_circ: 0.95136
Ran for 254050 frames Cell Events: 7133 mean_circ: 0.951351
Ran for 254550 frames Cell Events: 7155 mean_circ: 0.951344
Ran for 255050 frames Cell Events: 7176 mean_circ: 0.951352
Ran for 255550 frames Cell Events: 7192 mean_circ: 0.95132
Ran for 256050 frames Cell Events: 7201 mean_circ: 0.951324
Ran for 256550 frames Cell Events: 7216 mean_circ: 0.951336
Ran for 257050 frames Cell Events: 7230 mean_circ: 0.951349
Ran for 257550 frames Cell Events: 7246 mean_circ: 0.951345
Ran for 258550 frames Cell Events: 7279 mean_circ: 0.951392
Ran for 259050 frames Cell Events: 7301 mean_circ: 0.951386
Ran for 259550 frames Cell Events: 7314 mean_circ: 0.951396
Ran for 260550 frames Cell Events: 7344 mean_circ: 0.95141
Ran for 261050 frames Cell Events: 7359 mean_circ: 0.951401
Ran for 261550 frames Cell Events: 7367 mean_circ: 0.951403
Ran for 262050 frames Cell Events: 7380 mean_circ: 0.951386
Ran for 262550 frames Cell Events: 7391 mean_circ: 0.951388
Ran for 263550 frames Cell Events: 7421 mean_circ: 0.951418
Ran for 264050 frames Cell Events: 7433 mean_circ: 0.951431
Ran for 264550 frames Cell Events: 7442 mean_circ: 0.951447
Ran for 265050 frames Cell Events: 7458 mean_circ: 0.951437
Ran for 265550 frames Cell Events: 7471 mean_circ: 0.951426
Ran for 266050 frames Cell Events: 7482 mean_circ: 0.951434
Ran for 268050 frames Cell Events: 7541 mean_circ: 0.95142
Ran for 268550 frames Cell Events: 7550 mean_circ: 0.951425
Ran for 269050 frames Cell Events: 7564 mean_circ: 0.95143
Ran for 270050 frames Cell Events: 7595 mean_circ: 0.95145
Ran for 270550 frames Cell Events: 7610 mean_circ: 0.951452
Ran for 271050 frames Cell Events: 7623 mean_circ: 0.951441
Ran for 271550 frames Cell Events: 7633 mean_circ: 0.951446
Ran for 272050 frames Cell Events: 7651 mean_circ: 0.951436
Ran for 272550 frames Cell Events: 7669 mean_circ: 0.951434
Ran for 273050 frames Cell Events: 7678 mean_circ: 0.951432
Ran for 273550 frames Cell Events: 7690 mean_circ: 0.95144
Ran for 274050 frames Cell Events: 7704 mean_circ: 0.951447
Ran for 274550 frames Cell Events: 7719 mean_circ: 0.951442
Ran for 275050 frames Cell Events: 7735 mean_circ: 0.951445
Ran for 275550 frames Cell Events: 7746 mean_circ: 0.951456
Ran for 276050 frames Cell Events: 7753 mean_circ: 0.951449
Ran for 276550 frames Cell Events: 7768 mean_circ: 0.951432
Ran for 278050 frames Cell Events: 7815 mean_circ: 0.951443
Ran for 278550 frames Cell Events: 7822 mean_circ: 0.951457
Ran for 279550 frames Cell Events: 7855 mean_circ: 0.951475
Ran for 281050 frames Cell Events: 7896 mean_circ: 0.951511
Ran for 282050 frames Cell Events: 7919 mean_circ: 0.95154
Ran for 282550 frames Cell Events: 7928 mean_circ: 0.951501
Ran for 283050 frames Cell Events: 7938 mean_circ: 0.951502
Ran for 283550 frames Cell Events: 7951 mean_circ: 0.951516
Ran for 284050 frames Cell Events: 7971 mean_circ: 0.95149
Ran for 284550 frames Cell Events: 7991 mean_circ: 0.951459
Ran for 285050 frames Cell Events: 8002 mean_circ: 0.95144
Ran for 285550 frames Cell Events: 8017 mean_circ: 0.951439
Ran for 286050 frames Cell Events: 8032 mean_circ: 0.95144
Ran for 286550 frames Cell Events: 8046 mean_circ: 0.951435
Ran for 287050 frames Cell Events: 8060 mean_circ: 0.95144
Ran for 288550 frames Cell Events: 8110 mean_circ: 0.951439
Ran for 289550 frames Cell Events: 8129 mean_circ: 0.95144
Ran for 290050 frames Cell Events: 8142 mean_circ: 0.951426
Ran for 290550 frames Cell Events: 8161 mean_circ: 0.951444
Ran for 291050 frames Cell Events: 8173 mean_circ: 0.951424
Ran for 291550 frames Cell Events: 8190 mean_circ: 0.951405
Ran for 292050 frames Cell Events: 8203 mean_circ: 0.951392
Ran for 292550 frames Cell Events: 8216 mean_circ: 0.951401
Ran for 293050 frames Cell Events: 8226 mean_circ: 0.951391
Ran for 293550 frames Cell Events: 8234 mean_circ: 0.951403
Ran for 294050 frames Cell Events: 8249 mean_circ: 0.951409
Ran for 296050 frames Cell Events: 8297 mean_circ: 0.951424
Ran for 296550 frames Cell Events: 8312 mean_circ: 0.951432
Ran for 297550 frames Cell Events: 8350 mean_circ: 0.951444
Ran for 298050 frames Cell Events: 8360 mean_circ: 0.951454
Ran for 299050 frames Cell Events: 8392 mean_circ: 0.951468
Ran for 299550 frames Cell Events: 8406 mean_circ: 0.95146
Ran for 300050 frames Cell Events: 8423 mean_circ: 0.951482
Ran for 300550 frames Cell Events: 8436 mean_circ: 0.951475
Ran for 301050 frames Cell Events: 8458 mean_circ: 0.95147
Ran for 301550 frames Cell Events: 8480 mean_circ: 0.951479
Ran for 302050 frames Cell Events: 8490 mean_circ: 0.951465
Ran for 302550 frames Cell Events: 8500 mean_circ: 0.951433
Ran for 303050 frames Cell Events: 8518 mean_circ: 0.951446
Ran for 303550 frames Cell Events: 8530 mean_circ: 0.951451
Ran for 304550 frames Cell Events: 8562 mean_circ: 0.951434
Ran for 305050 frames Cell Events: 8573 mean_circ: 0.951443
Ran for 306050 frames Cell Events: 8601 mean_circ: 0.951448
Ran for 306550 frames Cell Events: 8616 mean_circ: 0.951462
Ran for 307550 frames Cell Events: 8644 mean_circ: 0.951476
Ran for 308050 frames Cell Events: 8655 mean_circ: 0.951488
Ran for 308550 frames Cell Events: 8670 mean_circ: 0.951466
Ran for 309050 frames Cell Events: 8681 mean_circ: 0.951472
Ran for 309550 frames Cell Events: 8692 mean_circ: 0.951468
Ran for 310550 frames Cell Events: 8716 mean_circ: 0.951502
Ran for 311050 frames Cell Events: 8724 mean_circ: 0.951514
Ran for 311550 frames Cell Events: 8738 mean_circ: 0.951514
Ran for 312550 frames Cell Events: 8769 mean_circ: 0.951503
Ran for 313550 frames Cell Events: 8795 mean_circ: 0.951489
Ran for 314550 frames Cell Events: 8816 mean_circ: 0.951492



End this measurment..



Stopping time: 3.86333e+008
****************************************
Measurement finished

Mean Circularitiy: 0.951488
Mean Area: 588.731
Mean FL-1 intensity: 3912.39
Mean FL-2 intensity: 4715.5
Mean FL-3 intensity: 0

frames processed: 312735
Total Time: 157585ms
Number of Runs (new bg img) 0
Frames collected: 314989
Skipped frames: 10414
Rescued Frames: 1106824
Samples DAQ: 78747185
Samples written: 157494280
Samples per Channel: 78747140
FPS: 1998.86

Samples per second: 499713
Expected samples/s: 500000

Events: 8822
Events per second: 55.9826
jumped back (PMT): 7653
#Frames read, frequency
# 0 frames :415125
# 1 frames :194110
# 2 frames :6577
# 3 frames :2181
# 4 frames :902
# 5 frames :318
# 6 frames :3019
# 7 frames :2137
# 8 frames :1281
# 9 frames :599
# 10 frames :1482
# 11 frames :532
# 12 frames :605
# 13 frames :255
# 14 frames :209
# 15 frames :175
# 16 frames :134
# 17 frames :94
# 18 frames :52
# 19 frames :28
# 20 frames :28
# 21 frames :22
# 22 frames :18
# 23 frames :12
# 24 frames :14
# 25 frames :7
# 26 frames :3
# 27 frames :1
# 28 frames :4
# 29 frames :4
# 30 frames :4
# 31 frames :2
# 33 frames :1
# 34 frames :1
# 35 frames :3
# 37 frames :1
# 39 frames :1
# 42 frames :1
# 62 frames :1
# 65 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.8714
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0