Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_18.42.36 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "1c426d1eac4fc88389d950dd7230de8a",
"name": "M1_20170618_1439_dsRNA_r2_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "16:42:58"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8693 (max 8694) in '8693'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.8878
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 3.8692e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 30 mean_circ: 0.956765
Ran for 1550 frames Cell Events: 42 mean_circ: 0.956547
Ran for 2050 frames Cell Events: 60 mean_circ: 0.956505
Ran for 2550 frames Cell Events: 75 mean_circ: 0.957263
Ran for 3050 frames Cell Events: 88 mean_circ: 0.958205
Ran for 5050 frames Cell Events: 172 mean_circ: 0.954065
Ran for 6050 frames Cell Events: 206 mean_circ: 0.955464
Ran for 6550 frames Cell Events: 223 mean_circ: 0.955044
Ran for 8050 frames Cell Events: 268 mean_circ: 0.955317
Ran for 8550 frames Cell Events: 282 mean_circ: 0.955308
Ran for 9550 frames Cell Events: 316 mean_circ: 0.955692
Ran for 10050 frames Cell Events: 329 mean_circ: 0.955798
Ran for 10550 frames Cell Events: 350 mean_circ: 0.955093
Ran for 11050 frames Cell Events: 361 mean_circ: 0.955372
Ran for 11550 frames Cell Events: 371 mean_circ: 0.955102
Ran for 12050 frames Cell Events: 390 mean_circ: 0.955091
Ran for 12550 frames Cell Events: 400 mean_circ: 0.95533
Ran for 13050 frames Cell Events: 418 mean_circ: 0.95573
Ran for 13550 frames Cell Events: 435 mean_circ: 0.956097
Ran for 14050 frames Cell Events: 445 mean_circ: 0.955857
Ran for 14550 frames Cell Events: 458 mean_circ: 0.955817
Ran for 15050 frames Cell Events: 471 mean_circ: 0.955913
Ran for 15550 frames Cell Events: 488 mean_circ: 0.95589
Ran for 16050 frames Cell Events: 502 mean_circ: 0.956222
Ran for 17050 frames Cell Events: 540 mean_circ: 0.956973
Ran for 17550 frames Cell Events: 550 mean_circ: 0.95687
Ran for 18050 frames Cell Events: 566 mean_circ: 0.956894
Ran for 19050 frames Cell Events: 593 mean_circ: 0.957165
Ran for 20050 frames Cell Events: 637 mean_circ: 0.956184
Ran for 21050 frames Cell Events: 681 mean_circ: 0.956069
Ran for 21550 frames Cell Events: 692 mean_circ: 0.956083
Ran for 22050 frames Cell Events: 708 mean_circ: 0.956132
Ran for 22550 frames Cell Events: 724 mean_circ: 0.955833
Ran for 23050 frames Cell Events: 736 mean_circ: 0.955876
Ran for 23550 frames Cell Events: 750 mean_circ: 0.955874
Ran for 24050 frames Cell Events: 768 mean_circ: 0.956083
Ran for 24550 frames Cell Events: 784 mean_circ: 0.956195
Ran for 25050 frames Cell Events: 795 mean_circ: 0.956216
Ran for 26050 frames Cell Events: 833 mean_circ: 0.956231
Ran for 26550 frames Cell Events: 847 mean_circ: 0.956318
Ran for 28050 frames Cell Events: 913 mean_circ: 0.956108
Ran for 29050 frames Cell Events: 946 mean_circ: 0.956008
Ran for 29550 frames Cell Events: 966 mean_circ: 0.956044
Ran for 30050 frames Cell Events: 984 mean_circ: 0.95601
Ran for 30550 frames Cell Events: 1001 mean_circ: 0.955831
Ran for 31050 frames Cell Events: 1015 mean_circ: 0.955721
Ran for 31550 frames Cell Events: 1029 mean_circ: 0.955717
Ran for 32550 frames Cell Events: 1057 mean_circ: 0.955506
Ran for 33050 frames Cell Events: 1076 mean_circ: 0.955403
Ran for 34550 frames Cell Events: 1116 mean_circ: 0.954902
Ran for 35550 frames Cell Events: 1136 mean_circ: 0.95493
Ran for 36050 frames Cell Events: 1154 mean_circ: 0.955001
Ran for 36550 frames Cell Events: 1171 mean_circ: 0.955036
Ran for 37050 frames Cell Events: 1180 mean_circ: 0.955152
Ran for 37550 frames Cell Events: 1194 mean_circ: 0.955103
Ran for 38050 frames Cell Events: 1205 mean_circ: 0.955113
Ran for 38550 frames Cell Events: 1216 mean_circ: 0.955118
Ran for 39050 frames Cell Events: 1226 mean_circ: 0.955113
Ran for 39550 frames Cell Events: 1233 mean_circ: 0.955058
Ran for 40050 frames Cell Events: 1248 mean_circ: 0.954881
Ran for 40550 frames Cell Events: 1272 mean_circ: 0.95471
Ran for 42050 frames Cell Events: 1313 mean_circ: 0.954617
Ran for 44550 frames Cell Events: 1384 mean_circ: 0.954488
Ran for 45050 frames Cell Events: 1406 mean_circ: 0.954376
Ran for 46050 frames Cell Events: 1440 mean_circ: 0.954389
Ran for 47050 frames Cell Events: 1480 mean_circ: 0.954509
Ran for 47550 frames Cell Events: 1490 mean_circ: 0.954548
Ran for 48050 frames Cell Events: 1505 mean_circ: 0.954529
Ran for 48550 frames Cell Events: 1518 mean_circ: 0.95459
Ran for 49050 frames Cell Events: 1530 mean_circ: 0.954574
Ran for 49550 frames Cell Events: 1538 mean_circ: 0.954468
Ran for 50050 frames Cell Events: 1554 mean_circ: 0.954496
Ran for 50550 frames Cell Events: 1563 mean_circ: 0.954496
Ran for 51050 frames Cell Events: 1576 mean_circ: 0.954538
Ran for 51550 frames Cell Events: 1581 mean_circ: 0.954482
Ran for 52050 frames Cell Events: 1599 mean_circ: 0.954541
Ran for 53550 frames Cell Events: 1651 mean_circ: 0.954278
Ran for 54050 frames Cell Events: 1668 mean_circ: 0.954148
Ran for 55050 frames Cell Events: 1704 mean_circ: 0.954029
Ran for 55550 frames Cell Events: 1722 mean_circ: 0.954064
Ran for 56050 frames Cell Events: 1739 mean_circ: 0.954024
Ran for 56550 frames Cell Events: 1750 mean_circ: 0.953848
Ran for 57050 frames Cell Events: 1767 mean_circ: 0.953929
Ran for 57550 frames Cell Events: 1778 mean_circ: 0.953877
Ran for 58550 frames Cell Events: 1808 mean_circ: 0.953871
Ran for 60050 frames Cell Events: 1848 mean_circ: 0.953947
Ran for 60550 frames Cell Events: 1860 mean_circ: 0.953935
Ran for 61050 frames Cell Events: 1872 mean_circ: 0.953871
Ran for 61550 frames Cell Events: 1887 mean_circ: 0.9539
Ran for 62050 frames Cell Events: 1899 mean_circ: 0.953883
Ran for 62550 frames Cell Events: 1922 mean_circ: 0.953961
Ran for 63050 frames Cell Events: 1939 mean_circ: 0.954034
Ran for 63550 frames Cell Events: 1951 mean_circ: 0.954076
Ran for 64050 frames Cell Events: 1978 mean_circ: 0.954066
Ran for 64550 frames Cell Events: 1989 mean_circ: 0.954081
Ran for 65550 frames Cell Events: 2018 mean_circ: 0.954041
Ran for 66050 frames Cell Events: 2024 mean_circ: 0.954123
Ran for 67050 frames Cell Events: 2045 mean_circ: 0.954232
Ran for 67550 frames Cell Events: 2055 mean_circ: 0.954217
Ran for 68050 frames Cell Events: 2075 mean_circ: 0.954171
Ran for 69050 frames Cell Events: 2105 mean_circ: 0.954143
Ran for 69550 frames Cell Events: 2117 mean_circ: 0.954029
Ran for 70050 frames Cell Events: 2133 mean_circ: 0.954044
Ran for 71050 frames Cell Events: 2152 mean_circ: 0.954022
Ran for 72050 frames Cell Events: 2187 mean_circ: 0.954065
Ran for 73050 frames Cell Events: 2220 mean_circ: 0.954133
Ran for 73550 frames Cell Events: 2238 mean_circ: 0.954183
Ran for 74050 frames Cell Events: 2255 mean_circ: 0.954101
Ran for 75550 frames Cell Events: 2288 mean_circ: 0.954146
Ran for 76550 frames Cell Events: 2320 mean_circ: 0.95402
Ran for 77050 frames Cell Events: 2333 mean_circ: 0.953984
Ran for 77550 frames Cell Events: 2346 mean_circ: 0.953748
Ran for 78050 frames Cell Events: 2366 mean_circ: 0.953775
Ran for 79550 frames Cell Events: 2404 mean_circ: 0.953712
Ran for 80050 frames Cell Events: 2421 mean_circ: 0.953769
Ran for 80550 frames Cell Events: 2438 mean_circ: 0.953675
Ran for 81050 frames Cell Events: 2455 mean_circ: 0.95371
Ran for 81550 frames Cell Events: 2473 mean_circ: 0.953688
Ran for 83050 frames Cell Events: 2513 mean_circ: 0.953635
Ran for 83550 frames Cell Events: 2527 mean_circ: 0.953618
Ran for 84050 frames Cell Events: 2544 mean_circ: 0.953646
Ran for 84550 frames Cell Events: 2556 mean_circ: 0.953662
Ran for 85550 frames Cell Events: 2589 mean_circ: 0.953647
Ran for 86050 frames Cell Events: 2603 mean_circ: 0.953591
Ran for 86550 frames Cell Events: 2612 mean_circ: 0.953593
Ran for 87050 frames Cell Events: 2630 mean_circ: 0.953622
Ran for 88550 frames Cell Events: 2682 mean_circ: 0.953502
Ran for 89550 frames Cell Events: 2716 mean_circ: 0.95352
Ran for 90050 frames Cell Events: 2730 mean_circ: 0.953444
Ran for 91050 frames Cell Events: 2758 mean_circ: 0.953424
Ran for 91550 frames Cell Events: 2773 mean_circ: 0.953441
Ran for 92050 frames Cell Events: 2787 mean_circ: 0.953474
Ran for 92550 frames Cell Events: 2803 mean_circ: 0.953473
Ran for 93550 frames Cell Events: 2838 mean_circ: 0.953537
Ran for 94050 frames Cell Events: 2854 mean_circ: 0.953464
Ran for 94550 frames Cell Events: 2868 mean_circ: 0.953485
Ran for 95050 frames Cell Events: 2884 mean_circ: 0.953507
Ran for 96550 frames Cell Events: 2928 mean_circ: 0.953501
Ran for 97050 frames Cell Events: 2940 mean_circ: 0.953532
Ran for 97550 frames Cell Events: 2958 mean_circ: 0.953558
Ran for 99550 frames Cell Events: 3023 mean_circ: 0.953586
Ran for 101550 frames Cell Events: 3087 mean_circ: 0.953645
Ran for 102050 frames Cell Events: 3104 mean_circ: 0.953657
Ran for 102550 frames Cell Events: 3121 mean_circ: 0.953691
Ran for 103050 frames Cell Events: 3132 mean_circ: 0.953719
Ran for 103550 frames Cell Events: 3144 mean_circ: 0.953748
Ran for 104050 frames Cell Events: 3161 mean_circ: 0.953722
Ran for 105550 frames Cell Events: 3207 mean_circ: 0.953833
Ran for 106050 frames Cell Events: 3229 mean_circ: 0.953691
Ran for 106550 frames Cell Events: 3242 mean_circ: 0.953718
Ran for 107050 frames Cell Events: 3258 mean_circ: 0.953714
Ran for 108050 frames Cell Events: 3298 mean_circ: 0.953695
Ran for 108550 frames Cell Events: 3312 mean_circ: 0.953728
Ran for 109050 frames Cell Events: 3327 mean_circ: 0.95373
Ran for 110050 frames Cell Events: 3365 mean_circ: 0.953741
Ran for 110550 frames Cell Events: 3377 mean_circ: 0.953722
Ran for 111050 frames Cell Events: 3390 mean_circ: 0.953729
Ran for 111550 frames Cell Events: 3411 mean_circ: 0.953671
Ran for 112050 frames Cell Events: 3435 mean_circ: 0.953624
Ran for 112550 frames Cell Events: 3446 mean_circ: 0.953641
Ran for 113050 frames Cell Events: 3469 mean_circ: 0.953641
Ran for 113550 frames Cell Events: 3482 mean_circ: 0.953619
Ran for 115050 frames Cell Events: 3537 mean_circ: 0.953654
Ran for 115550 frames Cell Events: 3552 mean_circ: 0.953656
Ran for 116050 frames Cell Events: 3565 mean_circ: 0.953699
Ran for 116550 frames Cell Events: 3587 mean_circ: 0.953726
Ran for 117050 frames Cell Events: 3604 mean_circ: 0.953786
Ran for 117550 frames Cell Events: 3609 mean_circ: 0.953799
Ran for 118050 frames Cell Events: 3628 mean_circ: 0.953836
Ran for 119050 frames Cell Events: 3658 mean_circ: 0.953874
Ran for 119550 frames Cell Events: 3676 mean_circ: 0.953889
Ran for 120050 frames Cell Events: 3692 mean_circ: 0.953865
Ran for 120550 frames Cell Events: 3718 mean_circ: 0.95382
Ran for 121050 frames Cell Events: 3730 mean_circ: 0.953862
Ran for 121550 frames Cell Events: 3745 mean_circ: 0.953884
Ran for 122550 frames Cell Events: 3780 mean_circ: 0.953815
Ran for 123050 frames Cell Events: 3800 mean_circ: 0.953845
Ran for 123550 frames Cell Events: 3817 mean_circ: 0.95381
Ran for 124050 frames Cell Events: 3841 mean_circ: 0.953809
Ran for 125050 frames Cell Events: 3865 mean_circ: 0.95383
Ran for 125550 frames Cell Events: 3892 mean_circ: 0.95384
Ran for 126050 frames Cell Events: 3915 mean_circ: 0.953916
Ran for 126550 frames Cell Events: 3931 mean_circ: 0.953966
Ran for 128050 frames Cell Events: 3974 mean_circ: 0.953957
Ran for 128550 frames Cell Events: 4001 mean_circ: 0.953962
Ran for 129050 frames Cell Events: 4022 mean_circ: 0.953925
Ran for 129550 frames Cell Events: 4033 mean_circ: 0.953947
Ran for 130050 frames Cell Events: 4050 mean_circ: 0.954007
Ran for 131550 frames Cell Events: 4098 mean_circ: 0.953975
Ran for 132050 frames Cell Events: 4119 mean_circ: 0.953969
Ran for 132550 frames Cell Events: 4131 mean_circ: 0.953997
Ran for 134050 frames Cell Events: 4192 mean_circ: 0.953912
Ran for 134550 frames Cell Events: 4211 mean_circ: 0.953888
Ran for 135050 frames Cell Events: 4241 mean_circ: 0.953858
Ran for 135550 frames Cell Events: 4255 mean_circ: 0.953832
Ran for 136050 frames Cell Events: 4270 mean_circ: 0.953816
Ran for 136550 frames Cell Events: 4284 mean_circ: 0.953834
Ran for 137050 frames Cell Events: 4306 mean_circ: 0.953765
Ran for 137550 frames Cell Events: 4328 mean_circ: 0.953777
Ran for 138050 frames Cell Events: 4348 mean_circ: 0.953782
Ran for 138550 frames Cell Events: 4364 mean_circ: 0.953759
Ran for 139050 frames Cell Events: 4387 mean_circ: 0.953749
Ran for 139550 frames Cell Events: 4399 mean_circ: 0.953795
Ran for 140050 frames Cell Events: 4405 mean_circ: 0.953799
Ran for 141050 frames Cell Events: 4433 mean_circ: 0.953829
Ran for 141550 frames Cell Events: 4447 mean_circ: 0.953836
Ran for 142050 frames Cell Events: 4463 mean_circ: 0.953887
Ran for 142550 frames Cell Events: 4480 mean_circ: 0.953887
Ran for 143550 frames Cell Events: 4516 mean_circ: 0.953894
Ran for 144550 frames Cell Events: 4564 mean_circ: 0.953925
Ran for 145050 frames Cell Events: 4579 mean_circ: 0.953924
Ran for 145550 frames Cell Events: 4602 mean_circ: 0.953979
Ran for 146550 frames Cell Events: 4644 mean_circ: 0.95403
Ran for 147050 frames Cell Events: 4667 mean_circ: 0.954039
Ran for 147550 frames Cell Events: 4684 mean_circ: 0.954003
Ran for 148550 frames Cell Events: 4718 mean_circ: 0.954039
Ran for 149050 frames Cell Events: 4733 mean_circ: 0.953982
Ran for 150050 frames Cell Events: 4775 mean_circ: 0.95397
Ran for 150550 frames Cell Events: 4797 mean_circ: 0.953972
Ran for 151050 frames Cell Events: 4814 mean_circ: 0.953873
Ran for 151550 frames Cell Events: 4827 mean_circ: 0.953794
Ran for 152050 frames Cell Events: 4845 mean_circ: 0.953817
Ran for 154050 frames Cell Events: 4924 mean_circ: 0.953874
Ran for 154550 frames Cell Events: 4945 mean_circ: 0.953914
Ran for 155550 frames Cell Events: 4972 mean_circ: 0.953935
Ran for 156050 frames Cell Events: 4999 mean_circ: 0.953837
Ran for 156550 frames Cell Events: 5015 mean_circ: 0.953853
Ran for 157050 frames Cell Events: 5027 mean_circ: 0.953844
Ran for 157550 frames Cell Events: 5045 mean_circ: 0.953871
Ran for 158050 frames Cell Events: 5057 mean_circ: 0.953883
Ran for 159050 frames Cell Events: 5087 mean_circ: 0.953925
Ran for 159550 frames Cell Events: 5105 mean_circ: 0.953918
Ran for 160050 frames Cell Events: 5127 mean_circ: 0.953938
Ran for 160550 frames Cell Events: 5145 mean_circ: 0.953904
Ran for 161050 frames Cell Events: 5160 mean_circ: 0.953861
Ran for 163050 frames Cell Events: 5222 mean_circ: 0.9538
Ran for 163550 frames Cell Events: 5240 mean_circ: 0.953803
Ran for 165550 frames Cell Events: 5303 mean_circ: 0.953791
Ran for 166550 frames Cell Events: 5336 mean_circ: 0.95377
Ran for 167050 frames Cell Events: 5358 mean_circ: 0.95379
Ran for 167550 frames Cell Events: 5372 mean_circ: 0.953778
Ran for 168550 frames Cell Events: 5402 mean_circ: 0.953841
Ran for 170050 frames Cell Events: 5456 mean_circ: 0.953847
Ran for 170550 frames Cell Events: 5473 mean_circ: 0.953877
Ran for 171050 frames Cell Events: 5491 mean_circ: 0.9539
Ran for 171550 frames Cell Events: 5506 mean_circ: 0.953913
Ran for 172550 frames Cell Events: 5539 mean_circ: 0.953937
Ran for 173050 frames Cell Events: 5552 mean_circ: 0.953882
Ran for 173550 frames Cell Events: 5563 mean_circ: 0.953876
Ran for 174050 frames Cell Events: 5579 mean_circ: 0.953905
Ran for 175550 frames Cell Events: 5633 mean_circ: 0.953874
Ran for 176550 frames Cell Events: 5663 mean_circ: 0.953844
Ran for 177050 frames Cell Events: 5676 mean_circ: 0.953851
Ran for 178050 frames Cell Events: 5700 mean_circ: 0.953855
Ran for 178550 frames Cell Events: 5719 mean_circ: 0.953876
Ran for 179050 frames Cell Events: 5735 mean_circ: 0.953857
Ran for 179550 frames Cell Events: 5759 mean_circ: 0.953887
Ran for 180050 frames Cell Events: 5773 mean_circ: 0.953895
Ran for 180550 frames Cell Events: 5794 mean_circ: 0.953897
Ran for 181050 frames Cell Events: 5807 mean_circ: 0.953889
Ran for 182050 frames Cell Events: 5846 mean_circ: 0.953912
Ran for 183050 frames Cell Events: 5867 mean_circ: 0.953894
Ran for 184050 frames Cell Events: 5891 mean_circ: 0.953944
Ran for 184550 frames Cell Events: 5905 mean_circ: 0.95393
Ran for 185050 frames Cell Events: 5920 mean_circ: 0.953904
Ran for 185550 frames Cell Events: 5936 mean_circ: 0.953927
Ran for 187550 frames Cell Events: 5995 mean_circ: 0.953877
Ran for 188050 frames Cell Events: 6013 mean_circ: 0.953843
Ran for 188550 frames Cell Events: 6025 mean_circ: 0.953861
Ran for 189050 frames Cell Events: 6043 mean_circ: 0.953867
Ran for 189550 frames Cell Events: 6054 mean_circ: 0.95387
Ran for 190550 frames Cell Events: 6077 mean_circ: 0.953861
Ran for 191550 frames Cell Events: 6116 mean_circ: 0.953879
Ran for 192050 frames Cell Events: 6140 mean_circ: 0.953912
Ran for 192550 frames Cell Events: 6156 mean_circ: 0.953905
Ran for 193050 frames Cell Events: 6175 mean_circ: 0.953912
Ran for 193550 frames Cell Events: 6190 mean_circ: 0.953918
Ran for 194050 frames Cell Events: 6201 mean_circ: 0.95392
Ran for 194550 frames Cell Events: 6217 mean_circ: 0.953932
Ran for 195050 frames Cell Events: 6237 mean_circ: 0.953943
Ran for 195550 frames Cell Events: 6251 mean_circ: 0.953921
Ran for 197050 frames Cell Events: 6303 mean_circ: 0.953906
Ran for 197550 frames Cell Events: 6316 mean_circ: 0.953882
Ran for 198550 frames Cell Events: 6349 mean_circ: 0.9539
Ran for 199550 frames Cell Events: 6380 mean_circ: 0.953909
Ran for 200050 frames Cell Events: 6396 mean_circ: 0.953886
Ran for 200550 frames Cell Events: 6412 mean_circ: 0.953894
Ran for 201550 frames Cell Events: 6454 mean_circ: 0.953888
Ran for 202550 frames Cell Events: 6480 mean_circ: 0.953872
Ran for 203050 frames Cell Events: 6497 mean_circ: 0.953899
Ran for 203550 frames Cell Events: 6514 mean_circ: 0.953892
Ran for 204050 frames Cell Events: 6529 mean_circ: 0.953899
Ran for 204550 frames Cell Events: 6542 mean_circ: 0.953901
Ran for 205050 frames Cell Events: 6557 mean_circ: 0.953913
Ran for 205550 frames Cell Events: 6567 mean_circ: 0.953928
Ran for 206050 frames Cell Events: 6581 mean_circ: 0.953911
Ran for 207550 frames Cell Events: 6641 mean_circ: 0.953901
Ran for 208050 frames Cell Events: 6662 mean_circ: 0.953891
Ran for 209550 frames Cell Events: 6723 mean_circ: 0.953857
Ran for 211050 frames Cell Events: 6786 mean_circ: 0.953885
Ran for 212550 frames Cell Events: 6857 mean_circ: 0.953862
Ran for 213050 frames Cell Events: 6873 mean_circ: 0.953851
Ran for 214050 frames Cell Events: 6899 mean_circ: 0.95383
Ran for 214550 frames Cell Events: 6923 mean_circ: 0.953817
Ran for 215050 frames Cell Events: 6942 mean_circ: 0.953825
Ran for 215550 frames Cell Events: 6957 mean_circ: 0.953811
Ran for 216050 frames Cell Events: 6973 mean_circ: 0.953798
Ran for 216550 frames Cell Events: 6981 mean_circ: 0.95379
Ran for 217050 frames Cell Events: 6999 mean_circ: 0.953795
Ran for 218050 frames Cell Events: 7027 mean_circ: 0.953802
Ran for 218550 frames Cell Events: 7037 mean_circ: 0.953797
Ran for 219550 frames Cell Events: 7073 mean_circ: 0.953777
Ran for 220050 frames Cell Events: 7093 mean_circ: 0.953774
Ran for 221050 frames Cell Events: 7124 mean_circ: 0.953746
Ran for 221550 frames Cell Events: 7135 mean_circ: 0.95376
Ran for 222050 frames Cell Events: 7148 mean_circ: 0.953765
Ran for 223050 frames Cell Events: 7197 mean_circ: 0.953715
Ran for 224050 frames Cell Events: 7237 mean_circ: 0.953608
Ran for 224550 frames Cell Events: 7255 mean_circ: 0.953599
Ran for 225050 frames Cell Events: 7269 mean_circ: 0.953614
Ran for 225550 frames Cell Events: 7286 mean_circ: 0.953619
Ran for 227550 frames Cell Events: 7348 mean_circ: 0.953617
Ran for 229050 frames Cell Events: 7398 mean_circ: 0.953587
Ran for 229550 frames Cell Events: 7414 mean_circ: 0.9536
Ran for 230050 frames Cell Events: 7429 mean_circ: 0.9536
Ran for 231050 frames Cell Events: 7461 mean_circ: 0.953644
Ran for 231550 frames Cell Events: 7476 mean_circ: 0.95365
Ran for 232050 frames Cell Events: 7493 mean_circ: 0.95363
Ran for 232550 frames Cell Events: 7508 mean_circ: 0.953635
Ran for 233050 frames Cell Events: 7526 mean_circ: 0.953615
Ran for 233550 frames Cell Events: 7537 mean_circ: 0.953618
Ran for 234050 frames Cell Events: 7552 mean_circ: 0.953629
Ran for 234550 frames Cell Events: 7576 mean_circ: 0.953625
Ran for 235050 frames Cell Events: 7598 mean_circ: 0.95364
Ran for 235550 frames Cell Events: 7617 mean_circ: 0.953666
Ran for 236050 frames Cell Events: 7631 mean_circ: 0.953678
Ran for 236550 frames Cell Events: 7653 mean_circ: 0.953686
Ran for 237050 frames Cell Events: 7670 mean_circ: 0.953731
Ran for 237550 frames Cell Events: 7682 mean_circ: 0.95374
Ran for 238050 frames Cell Events: 7716 mean_circ: 0.953717
Ran for 238550 frames Cell Events: 7730 mean_circ: 0.953722
Ran for 239050 frames Cell Events: 7746 mean_circ: 0.953744
Ran for 239550 frames Cell Events: 7772 mean_circ: 0.953769
Ran for 240550 frames Cell Events: 7810 mean_circ: 0.953762
Ran for 241050 frames Cell Events: 7824 mean_circ: 0.953753
Ran for 241550 frames Cell Events: 7842 mean_circ: 0.953754
Ran for 242050 frames Cell Events: 7868 mean_circ: 0.953699
Ran for 243050 frames Cell Events: 7913 mean_circ: 0.953705
Ran for 243550 frames Cell Events: 7926 mean_circ: 0.953698
Ran for 244050 frames Cell Events: 7944 mean_circ: 0.953708
Ran for 244550 frames Cell Events: 7966 mean_circ: 0.953711
Ran for 245050 frames Cell Events: 7985 mean_circ: 0.953678
Ran for 245550 frames Cell Events: 8011 mean_circ: 0.953654
Ran for 246050 frames Cell Events: 8023 mean_circ: 0.953661
Ran for 246550 frames Cell Events: 8042 mean_circ: 0.953668
Ran for 247050 frames Cell Events: 8066 mean_circ: 0.953694
Ran for 248050 frames Cell Events: 8103 mean_circ: 0.953725
Ran for 248550 frames Cell Events: 8115 mean_circ: 0.95372
Ran for 249050 frames Cell Events: 8138 mean_circ: 0.953721
Ran for 249550 frames Cell Events: 8152 mean_circ: 0.953718
Ran for 250050 frames Cell Events: 8166 mean_circ: 0.953706
Ran for 251550 frames Cell Events: 8233 mean_circ: 0.953685
Ran for 252050 frames Cell Events: 8246 mean_circ: 0.953688
Ran for 252550 frames Cell Events: 8262 mean_circ: 0.953672
Ran for 253050 frames Cell Events: 8276 mean_circ: 0.953672
Ran for 253550 frames Cell Events: 8293 mean_circ: 0.953667
Ran for 254050 frames Cell Events: 8307 mean_circ: 0.953678
Ran for 254550 frames Cell Events: 8322 mean_circ: 0.953681
Ran for 255550 frames Cell Events: 8356 mean_circ: 0.953665
Ran for 256050 frames Cell Events: 8378 mean_circ: 0.95368
Ran for 257050 frames Cell Events: 8410 mean_circ: 0.953694
Ran for 258050 frames Cell Events: 8442 mean_circ: 0.953678
Ran for 258550 frames Cell Events: 8454 mean_circ: 0.953669
Ran for 259050 frames Cell Events: 8468 mean_circ: 0.953676
Ran for 260050 frames Cell Events: 8507 mean_circ: 0.953641
Ran for 261050 frames Cell Events: 8539 mean_circ: 0.953621
Ran for 262050 frames Cell Events: 8586 mean_circ: 0.953656
Ran for 262550 frames Cell Events: 8604 mean_circ: 0.953681
Ran for 263050 frames Cell Events: 8630 mean_circ: 0.953687
Ran for 263550 frames Cell Events: 8650 mean_circ: 0.953682
Ran for 264050 frames Cell Events: 8668 mean_circ: 0.953692
Ran for 264550 frames Cell Events: 8675 mean_circ: 0.953695



End this measurment..



Stopping time: 3.87052e+008
****************************************
Measurement finished

Mean Circularitiy: 0.953682
Mean Area: 580.618
Mean FL-1 intensity: 3125.01
Mean FL-2 intensity: 3694.18
Mean FL-3 intensity: 0

frames processed: 264947
Total Time: 132559ms
Number of Runs (new bg img) 0
Frames collected: 264947
Skipped frames: 13551
Rescued Frames: 1293414
Samples DAQ: 66236820
Samples written: 132473550
Samples per Channel: 66236775
FPS: 1998.72

Samples per second: 499679
Expected samples/s: 500000

Events: 8694
Events per second: 65.5861
jumped back (PMT): 6570
#Frames read, frequency
# 0 frames :365655
# 1 frames :144328
# 2 frames :6327
# 3 frames :2106
# 4 frames :1041
# 5 frames :470
# 6 frames :1476
# 7 frames :2549
# 8 frames :1097
# 9 frames :611
# 10 frames :1410
# 11 frames :833
# 12 frames :502
# 13 frames :275
# 14 frames :222
# 15 frames :216
# 16 frames :170
# 17 frames :130
# 18 frames :88
# 19 frames :70
# 20 frames :45
# 21 frames :43
# 22 frames :34
# 23 frames :39
# 24 frames :29
# 25 frames :17
# 26 frames :15
# 27 frames :8
# 28 frames :10
# 29 frames :14
# 30 frames :13
# 31 frames :9
# 32 frames :2
# 33 frames :4
# 34 frames :3
# 36 frames :1
# 38 frames :3
# 42 frames :2
# 43 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.8878
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0