Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_19.35.09 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "bf77bde6dbadc8b71d66647497047cd9",
"name": "M1_20170620_1427_dsRNA_W8_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "17:35:31"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8138 (max 8140) in '8138'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.5595
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 5.58966e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 11 mean_circ: 0.842433
Ran for 1050 frames Cell Events: 25 mean_circ: 0.893976
Ran for 1550 frames Cell Events: 35 mean_circ: 0.906478
Ran for 2050 frames Cell Events: 41 mean_circ: 0.914571
Ran for 2550 frames Cell Events: 51 mean_circ: 0.920991
Ran for 3050 frames Cell Events: 62 mean_circ: 0.927978
Ran for 3550 frames Cell Events: 89 mean_circ: 0.930739
Ran for 4550 frames Cell Events: 116 mean_circ: 0.935702
Ran for 5550 frames Cell Events: 139 mean_circ: 0.936193
Ran for 6050 frames Cell Events: 157 mean_circ: 0.938301
Ran for 6550 frames Cell Events: 167 mean_circ: 0.936731
Ran for 7050 frames Cell Events: 174 mean_circ: 0.937804
Ran for 7550 frames Cell Events: 188 mean_circ: 0.938585
Ran for 8050 frames Cell Events: 205 mean_circ: 0.939989
Ran for 8550 frames Cell Events: 227 mean_circ: 0.940635
Ran for 9050 frames Cell Events: 247 mean_circ: 0.941221
Ran for 9550 frames Cell Events: 272 mean_circ: 0.941908
Ran for 10050 frames Cell Events: 286 mean_circ: 0.942361
Ran for 10550 frames Cell Events: 299 mean_circ: 0.942451
Ran for 11050 frames Cell Events: 315 mean_circ: 0.943657
Ran for 11550 frames Cell Events: 326 mean_circ: 0.943506
Ran for 12050 frames Cell Events: 342 mean_circ: 0.942841
Ran for 12550 frames Cell Events: 354 mean_circ: 0.943186
Ran for 13050 frames Cell Events: 382 mean_circ: 0.942409
Ran for 13550 frames Cell Events: 403 mean_circ: 0.942799
Ran for 14550 frames Cell Events: 443 mean_circ: 0.94345
Ran for 15050 frames Cell Events: 462 mean_circ: 0.943634
Ran for 15550 frames Cell Events: 488 mean_circ: 0.943889
Ran for 16050 frames Cell Events: 504 mean_circ: 0.944405
Ran for 16550 frames Cell Events: 520 mean_circ: 0.94459
Ran for 17550 frames Cell Events: 554 mean_circ: 0.944698
Ran for 18050 frames Cell Events: 570 mean_circ: 0.944753
Ran for 19050 frames Cell Events: 593 mean_circ: 0.944276
Ran for 19550 frames Cell Events: 606 mean_circ: 0.944387
Ran for 20550 frames Cell Events: 633 mean_circ: 0.944325
Ran for 21550 frames Cell Events: 656 mean_circ: 0.944091
Ran for 22050 frames Cell Events: 671 mean_circ: 0.9441
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Ran for 23050 frames Cell Events: 707 mean_circ: 0.944041
Ran for 23550 frames Cell Events: 720 mean_circ: 0.944068
Ran for 24050 frames Cell Events: 739 mean_circ: 0.944261
Ran for 24550 frames Cell Events: 751 mean_circ: 0.94447
Ran for 25550 frames Cell Events: 791 mean_circ: 0.944441
Ran for 26050 frames Cell Events: 806 mean_circ: 0.944301
Ran for 26550 frames Cell Events: 819 mean_circ: 0.944358
Ran for 27550 frames Cell Events: 860 mean_circ: 0.943844
Ran for 28550 frames Cell Events: 897 mean_circ: 0.943689
Ran for 29050 frames Cell Events: 906 mean_circ: 0.943652
Ran for 30050 frames Cell Events: 940 mean_circ: 0.943631
Ran for 30550 frames Cell Events: 952 mean_circ: 0.943662
Ran for 31050 frames Cell Events: 968 mean_circ: 0.943761
Ran for 32050 frames Cell Events: 1009 mean_circ: 0.943345
Ran for 33050 frames Cell Events: 1043 mean_circ: 0.943405
Ran for 34050 frames Cell Events: 1086 mean_circ: 0.943129
Ran for 34550 frames Cell Events: 1094 mean_circ: 0.943081
Ran for 35050 frames Cell Events: 1119 mean_circ: 0.94319
Ran for 35550 frames Cell Events: 1133 mean_circ: 0.943193
Ran for 36050 frames Cell Events: 1152 mean_circ: 0.942909
Ran for 37050 frames Cell Events: 1185 mean_circ: 0.943175
Ran for 37550 frames Cell Events: 1198 mean_circ: 0.943321
Ran for 38050 frames Cell Events: 1216 mean_circ: 0.943407
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Ran for 39550 frames Cell Events: 1258 mean_circ: 0.943476
Ran for 40050 frames Cell Events: 1278 mean_circ: 0.94371
Ran for 41550 frames Cell Events: 1311 mean_circ: 0.943649
Ran for 42550 frames Cell Events: 1350 mean_circ: 0.943928
Ran for 43050 frames Cell Events: 1368 mean_circ: 0.943949
Ran for 43550 frames Cell Events: 1376 mean_circ: 0.944051
Ran for 45050 frames Cell Events: 1417 mean_circ: 0.944255
Ran for 45550 frames Cell Events: 1426 mean_circ: 0.944073
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Ran for 46550 frames Cell Events: 1451 mean_circ: 0.944162
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Ran for 50550 frames Cell Events: 1551 mean_circ: 0.944353
Ran for 51050 frames Cell Events: 1567 mean_circ: 0.944436
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Ran for 53050 frames Cell Events: 1613 mean_circ: 0.944659
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Ran for 54050 frames Cell Events: 1641 mean_circ: 0.944786
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Ran for 58550 frames Cell Events: 1769 mean_circ: 0.945064
Ran for 59050 frames Cell Events: 1780 mean_circ: 0.944972
Ran for 59550 frames Cell Events: 1789 mean_circ: 0.945028
Ran for 60050 frames Cell Events: 1807 mean_circ: 0.945113
Ran for 60550 frames Cell Events: 1817 mean_circ: 0.945144
Ran for 61050 frames Cell Events: 1835 mean_circ: 0.945269
Ran for 61550 frames Cell Events: 1848 mean_circ: 0.945193
Ran for 62050 frames Cell Events: 1857 mean_circ: 0.94517
Ran for 62550 frames Cell Events: 1868 mean_circ: 0.945225
Ran for 63050 frames Cell Events: 1879 mean_circ: 0.945353
Ran for 63550 frames Cell Events: 1893 mean_circ: 0.94533
Ran for 64050 frames Cell Events: 1904 mean_circ: 0.945385
Ran for 64550 frames Cell Events: 1924 mean_circ: 0.945375
Ran for 65050 frames Cell Events: 1938 mean_circ: 0.945447
Ran for 65550 frames Cell Events: 1965 mean_circ: 0.945514
Ran for 66050 frames Cell Events: 1993 mean_circ: 0.945646
Ran for 66550 frames Cell Events: 2014 mean_circ: 0.945594
Ran for 67050 frames Cell Events: 2032 mean_circ: 0.945599
Ran for 68050 frames Cell Events: 2077 mean_circ: 0.945503
Ran for 68550 frames Cell Events: 2099 mean_circ: 0.945621
Ran for 69050 frames Cell Events: 2114 mean_circ: 0.945674
Ran for 70550 frames Cell Events: 2172 mean_circ: 0.945691
Ran for 71050 frames Cell Events: 2183 mean_circ: 0.945747
Ran for 72050 frames Cell Events: 2213 mean_circ: 0.945841
Ran for 72550 frames Cell Events: 2234 mean_circ: 0.945795
Ran for 73050 frames Cell Events: 2242 mean_circ: 0.945683
Ran for 73550 frames Cell Events: 2253 mean_circ: 0.945765
Ran for 74050 frames Cell Events: 2259 mean_circ: 0.945842
Ran for 75050 frames Cell Events: 2289 mean_circ: 0.945866
Ran for 75550 frames Cell Events: 2306 mean_circ: 0.945939
Ran for 76050 frames Cell Events: 2318 mean_circ: 0.945957
Ran for 76550 frames Cell Events: 2335 mean_circ: 0.946028
Ran for 77050 frames Cell Events: 2354 mean_circ: 0.945971
Ran for 78050 frames Cell Events: 2372 mean_circ: 0.946015
Ran for 78550 frames Cell Events: 2386 mean_circ: 0.94598
Ran for 79050 frames Cell Events: 2393 mean_circ: 0.945938
Ran for 80050 frames Cell Events: 2422 mean_circ: 0.946056
Ran for 80550 frames Cell Events: 2433 mean_circ: 0.946102
Ran for 81050 frames Cell Events: 2441 mean_circ: 0.946114
Ran for 81550 frames Cell Events: 2460 mean_circ: 0.946129
Ran for 82050 frames Cell Events: 2470 mean_circ: 0.946168
Ran for 82550 frames Cell Events: 2480 mean_circ: 0.94622
Ran for 83050 frames Cell Events: 2494 mean_circ: 0.946273
Ran for 83550 frames Cell Events: 2503 mean_circ: 0.946312
Ran for 84050 frames Cell Events: 2518 mean_circ: 0.946333
Ran for 84550 frames Cell Events: 2532 mean_circ: 0.94629
Ran for 85050 frames Cell Events: 2537 mean_circ: 0.946285
Ran for 85550 frames Cell Events: 2550 mean_circ: 0.946371
Ran for 86050 frames Cell Events: 2565 mean_circ: 0.946455
Ran for 86550 frames Cell Events: 2586 mean_circ: 0.946558
Ran for 87050 frames Cell Events: 2604 mean_circ: 0.946585
Ran for 87550 frames Cell Events: 2615 mean_circ: 0.946548
Ran for 88050 frames Cell Events: 2627 mean_circ: 0.94655
Ran for 88550 frames Cell Events: 2641 mean_circ: 0.946555
Ran for 89050 frames Cell Events: 2655 mean_circ: 0.946542
Ran for 89550 frames Cell Events: 2668 mean_circ: 0.946494
Ran for 90550 frames Cell Events: 2693 mean_circ: 0.946579
Ran for 91050 frames Cell Events: 2700 mean_circ: 0.946594
Ran for 91550 frames Cell Events: 2713 mean_circ: 0.946611
Ran for 92550 frames Cell Events: 2744 mean_circ: 0.946692
Ran for 93050 frames Cell Events: 2757 mean_circ: 0.946731
Ran for 94550 frames Cell Events: 2793 mean_circ: 0.946698
Ran for 95050 frames Cell Events: 2809 mean_circ: 0.946654
Ran for 95550 frames Cell Events: 2826 mean_circ: 0.946622
Ran for 96050 frames Cell Events: 2837 mean_circ: 0.946589
Ran for 96550 frames Cell Events: 2842 mean_circ: 0.946643
Ran for 97050 frames Cell Events: 2854 mean_circ: 0.946667
Ran for 97550 frames Cell Events: 2869 mean_circ: 0.946702
Ran for 98050 frames Cell Events: 2881 mean_circ: 0.946654
Ran for 100550 frames Cell Events: 2978 mean_circ: 0.946722
Ran for 101550 frames Cell Events: 2999 mean_circ: 0.946684
Ran for 102050 frames Cell Events: 3010 mean_circ: 0.946699
Ran for 104050 frames Cell Events: 3056 mean_circ: 0.946621
Ran for 105050 frames Cell Events: 3085 mean_circ: 0.946681
Ran for 105550 frames Cell Events: 3098 mean_circ: 0.946737
Ran for 106550 frames Cell Events: 3122 mean_circ: 0.946722
Ran for 107550 frames Cell Events: 3157 mean_circ: 0.94646
Ran for 108050 frames Cell Events: 3176 mean_circ: 0.946437
Ran for 108550 frames Cell Events: 3185 mean_circ: 0.946373
Ran for 109050 frames Cell Events: 3199 mean_circ: 0.946369
Ran for 110550 frames Cell Events: 3252 mean_circ: 0.946389
Ran for 111550 frames Cell Events: 3278 mean_circ: 0.946447
Ran for 112050 frames Cell Events: 3290 mean_circ: 0.946493
Ran for 112550 frames Cell Events: 3303 mean_circ: 0.946541
Ran for 114050 frames Cell Events: 3337 mean_circ: 0.946577
Ran for 115050 frames Cell Events: 3365 mean_circ: 0.946636
Ran for 115550 frames Cell Events: 3379 mean_circ: 0.946669
Ran for 116050 frames Cell Events: 3389 mean_circ: 0.946643
Ran for 117050 frames Cell Events: 3418 mean_circ: 0.946634
Ran for 118550 frames Cell Events: 3472 mean_circ: 0.946642
Ran for 119550 frames Cell Events: 3498 mean_circ: 0.946667
Ran for 120050 frames Cell Events: 3507 mean_circ: 0.946668
Ran for 120550 frames Cell Events: 3525 mean_circ: 0.946638
Ran for 121050 frames Cell Events: 3541 mean_circ: 0.946657
Ran for 121550 frames Cell Events: 3545 mean_circ: 0.946673
Ran for 122050 frames Cell Events: 3560 mean_circ: 0.946643
Ran for 123550 frames Cell Events: 3606 mean_circ: 0.946643
Ran for 124050 frames Cell Events: 3616 mean_circ: 0.946615
Ran for 125050 frames Cell Events: 3647 mean_circ: 0.946682
Ran for 125550 frames Cell Events: 3658 mean_circ: 0.946698
Ran for 126050 frames Cell Events: 3671 mean_circ: 0.94668
Ran for 126550 frames Cell Events: 3685 mean_circ: 0.946671
Ran for 127050 frames Cell Events: 3695 mean_circ: 0.946671
Ran for 127550 frames Cell Events: 3714 mean_circ: 0.946696
Ran for 128050 frames Cell Events: 3728 mean_circ: 0.94673
Ran for 128550 frames Cell Events: 3738 mean_circ: 0.946734
Ran for 129550 frames Cell Events: 3767 mean_circ: 0.946694
Ran for 130050 frames Cell Events: 3784 mean_circ: 0.94676
Ran for 130550 frames Cell Events: 3799 mean_circ: 0.946761
Ran for 131550 frames Cell Events: 3829 mean_circ: 0.946815
Ran for 132550 frames Cell Events: 3863 mean_circ: 0.94688
Ran for 133050 frames Cell Events: 3872 mean_circ: 0.946916
Ran for 133550 frames Cell Events: 3890 mean_circ: 0.946866
Ran for 134050 frames Cell Events: 3906 mean_circ: 0.946898
Ran for 134550 frames Cell Events: 3914 mean_circ: 0.946836
Ran for 135050 frames Cell Events: 3922 mean_circ: 0.946798
Ran for 135550 frames Cell Events: 3940 mean_circ: 0.946805
Ran for 136550 frames Cell Events: 3964 mean_circ: 0.946717
Ran for 137050 frames Cell Events: 3979 mean_circ: 0.946744
Ran for 138050 frames Cell Events: 4037 mean_circ: 0.946798
Ran for 139050 frames Cell Events: 4081 mean_circ: 0.946775
Ran for 139550 frames Cell Events: 4094 mean_circ: 0.946759
Ran for 140050 frames Cell Events: 4110 mean_circ: 0.946777
Ran for 140550 frames Cell Events: 4124 mean_circ: 0.946709
Ran for 141050 frames Cell Events: 4135 mean_circ: 0.946693
Ran for 142550 frames Cell Events: 4176 mean_circ: 0.946741
Ran for 145050 frames Cell Events: 4248 mean_circ: 0.94663
Ran for 147550 frames Cell Events: 4327 mean_circ: 0.946686
Ran for 148050 frames Cell Events: 4344 mean_circ: 0.946627
Ran for 149550 frames Cell Events: 4383 mean_circ: 0.94663
Ran for 150050 frames Cell Events: 4397 mean_circ: 0.946604
Ran for 150550 frames Cell Events: 4408 mean_circ: 0.946614
Ran for 151050 frames Cell Events: 4419 mean_circ: 0.946628
Ran for 151550 frames Cell Events: 4436 mean_circ: 0.946656
Ran for 152050 frames Cell Events: 4445 mean_circ: 0.946619
Ran for 152550 frames Cell Events: 4459 mean_circ: 0.946643
Ran for 153050 frames Cell Events: 4473 mean_circ: 0.946691
Ran for 153550 frames Cell Events: 4489 mean_circ: 0.946689
Ran for 154550 frames Cell Events: 4514 mean_circ: 0.94663
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Ran for 156050 frames Cell Events: 4556 mean_circ: 0.946601
Ran for 157050 frames Cell Events: 4583 mean_circ: 0.946571
Ran for 158050 frames Cell Events: 4622 mean_circ: 0.946574
Ran for 158550 frames Cell Events: 4630 mean_circ: 0.946588
Ran for 159050 frames Cell Events: 4648 mean_circ: 0.946603
Ran for 160050 frames Cell Events: 4673 mean_circ: 0.946657
Ran for 161050 frames Cell Events: 4704 mean_circ: 0.946639
Ran for 162050 frames Cell Events: 4728 mean_circ: 0.946616
Ran for 162550 frames Cell Events: 4743 mean_circ: 0.946606
Ran for 163050 frames Cell Events: 4756 mean_circ: 0.94661
Ran for 163550 frames Cell Events: 4776 mean_circ: 0.946606
Ran for 164050 frames Cell Events: 4790 mean_circ: 0.946604
Ran for 164550 frames Cell Events: 4804 mean_circ: 0.946575
Ran for 165550 frames Cell Events: 4838 mean_circ: 0.946537
Ran for 166050 frames Cell Events: 4856 mean_circ: 0.946524
Ran for 166550 frames Cell Events: 4869 mean_circ: 0.946507
Ran for 168050 frames Cell Events: 4910 mean_circ: 0.946542
Ran for 169050 frames Cell Events: 4931 mean_circ: 0.946584
Ran for 169550 frames Cell Events: 4940 mean_circ: 0.946559
Ran for 170050 frames Cell Events: 4954 mean_circ: 0.946566
Ran for 170550 frames Cell Events: 4971 mean_circ: 0.946565
Ran for 171050 frames Cell Events: 4980 mean_circ: 0.946563
Ran for 171550 frames Cell Events: 4997 mean_circ: 0.946598
Ran for 172050 frames Cell Events: 5010 mean_circ: 0.946591
Ran for 172550 frames Cell Events: 5016 mean_circ: 0.946602
Ran for 173050 frames Cell Events: 5023 mean_circ: 0.946607
Ran for 173550 frames Cell Events: 5034 mean_circ: 0.946583
Ran for 174050 frames Cell Events: 5046 mean_circ: 0.946604
Ran for 175050 frames Cell Events: 5071 mean_circ: 0.946611
Ran for 175550 frames Cell Events: 5092 mean_circ: 0.946635
Ran for 176050 frames Cell Events: 5105 mean_circ: 0.946623
Ran for 176550 frames Cell Events: 5130 mean_circ: 0.946627
Ran for 177050 frames Cell Events: 5143 mean_circ: 0.946668
Ran for 179050 frames Cell Events: 5216 mean_circ: 0.94671
Ran for 179550 frames Cell Events: 5228 mean_circ: 0.946742
Ran for 180050 frames Cell Events: 5244 mean_circ: 0.946722
Ran for 180550 frames Cell Events: 5257 mean_circ: 0.946698
Ran for 181550 frames Cell Events: 5287 mean_circ: 0.946656
Ran for 182550 frames Cell Events: 5317 mean_circ: 0.946702
Ran for 183550 frames Cell Events: 5354 mean_circ: 0.946787
Ran for 184050 frames Cell Events: 5375 mean_circ: 0.946807
Ran for 186050 frames Cell Events: 5436 mean_circ: 0.946741
Ran for 187050 frames Cell Events: 5459 mean_circ: 0.946782
Ran for 187550 frames Cell Events: 5469 mean_circ: 0.946776
Ran for 188550 frames Cell Events: 5496 mean_circ: 0.946785
Ran for 189050 frames Cell Events: 5507 mean_circ: 0.946799
Ran for 189550 frames Cell Events: 5524 mean_circ: 0.946822
Ran for 191050 frames Cell Events: 5578 mean_circ: 0.946837
Ran for 192050 frames Cell Events: 5602 mean_circ: 0.946874
Ran for 192550 frames Cell Events: 5609 mean_circ: 0.946903
Ran for 193050 frames Cell Events: 5622 mean_circ: 0.94693
Ran for 193550 frames Cell Events: 5638 mean_circ: 0.946907
Ran for 194550 frames Cell Events: 5663 mean_circ: 0.946888
Ran for 195050 frames Cell Events: 5688 mean_circ: 0.94687
Ran for 195550 frames Cell Events: 5705 mean_circ: 0.946892
Ran for 196050 frames Cell Events: 5722 mean_circ: 0.946854
Ran for 196550 frames Cell Events: 5737 mean_circ: 0.94686
Ran for 197050 frames Cell Events: 5746 mean_circ: 0.946828
Ran for 197550 frames Cell Events: 5763 mean_circ: 0.946821
Ran for 198550 frames Cell Events: 5788 mean_circ: 0.946741
Ran for 199550 frames Cell Events: 5814 mean_circ: 0.946773
Ran for 200050 frames Cell Events: 5821 mean_circ: 0.946781
Ran for 200550 frames Cell Events: 5834 mean_circ: 0.946764
Ran for 201550 frames Cell Events: 5859 mean_circ: 0.946791
Ran for 202050 frames Cell Events: 5878 mean_circ: 0.946757
Ran for 202550 frames Cell Events: 5893 mean_circ: 0.946782
Ran for 203050 frames Cell Events: 5910 mean_circ: 0.946745
Ran for 203550 frames Cell Events: 5926 mean_circ: 0.946748
Ran for 204050 frames Cell Events: 5936 mean_circ: 0.9467
Ran for 204550 frames Cell Events: 5961 mean_circ: 0.946711
Ran for 205550 frames Cell Events: 5987 mean_circ: 0.946733
Ran for 206050 frames Cell Events: 5997 mean_circ: 0.946742
Ran for 206550 frames Cell Events: 6009 mean_circ: 0.94674
Ran for 207050 frames Cell Events: 6021 mean_circ: 0.946728
Ran for 207550 frames Cell Events: 6028 mean_circ: 0.946729
Ran for 208050 frames Cell Events: 6044 mean_circ: 0.946711
Ran for 209050 frames Cell Events: 6071 mean_circ: 0.946727
Ran for 210550 frames Cell Events: 6125 mean_circ: 0.946813
Ran for 211050 frames Cell Events: 6140 mean_circ: 0.946791
Ran for 211550 frames Cell Events: 6152 mean_circ: 0.946778
Ran for 212050 frames Cell Events: 6168 mean_circ: 0.946807
Ran for 213050 frames Cell Events: 6204 mean_circ: 0.946821
Ran for 214550 frames Cell Events: 6248 mean_circ: 0.946807
Ran for 215050 frames Cell Events: 6261 mean_circ: 0.946798
Ran for 215550 frames Cell Events: 6283 mean_circ: 0.946774
Ran for 216050 frames Cell Events: 6292 mean_circ: 0.946746
Ran for 217050 frames Cell Events: 6315 mean_circ: 0.946703
Ran for 217550 frames Cell Events: 6331 mean_circ: 0.946715
Ran for 218050 frames Cell Events: 6341 mean_circ: 0.946739
Ran for 218550 frames Cell Events: 6361 mean_circ: 0.946755
Ran for 220550 frames Cell Events: 6417 mean_circ: 0.946845
Ran for 221050 frames Cell Events: 6425 mean_circ: 0.946847
Ran for 221550 frames Cell Events: 6440 mean_circ: 0.946796
Ran for 222050 frames Cell Events: 6451 mean_circ: 0.946804
Ran for 223050 frames Cell Events: 6483 mean_circ: 0.946763
Ran for 223550 frames Cell Events: 6493 mean_circ: 0.946779
Ran for 224050 frames Cell Events: 6498 mean_circ: 0.946784
Ran for 224550 frames Cell Events: 6512 mean_circ: 0.946796
Ran for 225050 frames Cell Events: 6521 mean_circ: 0.94681
Ran for 225550 frames Cell Events: 6540 mean_circ: 0.946785
Ran for 226550 frames Cell Events: 6579 mean_circ: 0.946811
Ran for 227050 frames Cell Events: 6595 mean_circ: 0.946834
Ran for 227550 frames Cell Events: 6607 mean_circ: 0.946841
Ran for 228550 frames Cell Events: 6632 mean_circ: 0.946827
Ran for 229050 frames Cell Events: 6643 mean_circ: 0.946814
Ran for 229550 frames Cell Events: 6661 mean_circ: 0.946835
Ran for 230050 frames Cell Events: 6674 mean_circ: 0.946819
Ran for 230550 frames Cell Events: 6686 mean_circ: 0.94683
Ran for 231050 frames Cell Events: 6701 mean_circ: 0.946833
Ran for 231550 frames Cell Events: 6713 mean_circ: 0.94685
Ran for 232050 frames Cell Events: 6727 mean_circ: 0.946849
Ran for 232550 frames Cell Events: 6736 mean_circ: 0.946845
Ran for 233550 frames Cell Events: 6780 mean_circ: 0.946812
Ran for 235050 frames Cell Events: 6823 mean_circ: 0.946842
Ran for 235550 frames Cell Events: 6828 mean_circ: 0.946843
Ran for 236550 frames Cell Events: 6849 mean_circ: 0.946883
Ran for 237050 frames Cell Events: 6868 mean_circ: 0.946881
Ran for 238550 frames Cell Events: 6898 mean_circ: 0.946884
Ran for 239550 frames Cell Events: 6925 mean_circ: 0.946897
Ran for 240050 frames Cell Events: 6935 mean_circ: 0.946874
Ran for 240550 frames Cell Events: 6951 mean_circ: 0.946879
Ran for 241550 frames Cell Events: 6983 mean_circ: 0.946882
Ran for 242550 frames Cell Events: 7003 mean_circ: 0.946895
Ran for 243050 frames Cell Events: 7013 mean_circ: 0.946903
Ran for 244050 frames Cell Events: 7043 mean_circ: 0.946899
Ran for 244550 frames Cell Events: 7064 mean_circ: 0.946916
Ran for 246050 frames Cell Events: 7103 mean_circ: 0.946925
Ran for 246550 frames Cell Events: 7109 mean_circ: 0.946939
Ran for 247050 frames Cell Events: 7127 mean_circ: 0.946911
Ran for 248050 frames Cell Events: 7163 mean_circ: 0.946905
Ran for 248550 frames Cell Events: 7179 mean_circ: 0.946882
Ran for 249050 frames Cell Events: 7193 mean_circ: 0.946863
Ran for 250050 frames Cell Events: 7219 mean_circ: 0.946844
Ran for 251050 frames Cell Events: 7240 mean_circ: 0.946779
Ran for 252050 frames Cell Events: 7271 mean_circ: 0.946844
Ran for 253050 frames Cell Events: 7292 mean_circ: 0.946837
Ran for 254050 frames Cell Events: 7318 mean_circ: 0.94683
Ran for 254550 frames Cell Events: 7336 mean_circ: 0.946824
Ran for 255050 frames Cell Events: 7343 mean_circ: 0.946837
Ran for 255550 frames Cell Events: 7354 mean_circ: 0.94686
Ran for 256050 frames Cell Events: 7370 mean_circ: 0.94688
Ran for 256550 frames Cell Events: 7382 mean_circ: 0.946861
Ran for 259050 frames Cell Events: 7433 mean_circ: 0.94687
Ran for 260050 frames Cell Events: 7449 mean_circ: 0.946884
Ran for 260550 frames Cell Events: 7461 mean_circ: 0.946885
Ran for 261050 frames Cell Events: 7472 mean_circ: 0.946868
Ran for 261550 frames Cell Events: 7485 mean_circ: 0.946859
Ran for 262050 frames Cell Events: 7498 mean_circ: 0.946876
Ran for 262550 frames Cell Events: 7519 mean_circ: 0.946902
Ran for 263050 frames Cell Events: 7544 mean_circ: 0.946878
Ran for 263550 frames Cell Events: 7555 mean_circ: 0.946866
Ran for 264050 frames Cell Events: 7567 mean_circ: 0.946873
Ran for 264550 frames Cell Events: 7577 mean_circ: 0.94686
Ran for 265050 frames Cell Events: 7593 mean_circ: 0.946871
Ran for 265550 frames Cell Events: 7607 mean_circ: 0.946892
Ran for 266050 frames Cell Events: 7623 mean_circ: 0.946904
Ran for 267550 frames Cell Events: 7662 mean_circ: 0.946833
Ran for 268050 frames Cell Events: 7674 mean_circ: 0.946861
Ran for 268550 frames Cell Events: 7684 mean_circ: 0.946869
Ran for 269550 frames Cell Events: 7708 mean_circ: 0.94685
Ran for 270050 frames Cell Events: 7723 mean_circ: 0.946875
Ran for 270550 frames Cell Events: 7745 mean_circ: 0.946849
Ran for 271050 frames Cell Events: 7771 mean_circ: 0.946851
Ran for 271550 frames Cell Events: 7785 mean_circ: 0.946837
Ran for 272050 frames Cell Events: 7803 mean_circ: 0.946876
Ran for 272550 frames Cell Events: 7819 mean_circ: 0.946881
Ran for 273050 frames Cell Events: 7839 mean_circ: 0.946904
Ran for 273550 frames Cell Events: 7861 mean_circ: 0.946887
Ran for 274050 frames Cell Events: 7880 mean_circ: 0.946881
Ran for 274550 frames Cell Events: 7891 mean_circ: 0.946861
Ran for 276050 frames Cell Events: 7955 mean_circ: 0.946873
Ran for 276550 frames Cell Events: 7974 mean_circ: 0.946863
Ran for 277050 frames Cell Events: 7984 mean_circ: 0.94688
Ran for 277550 frames Cell Events: 8003 mean_circ: 0.946897
Ran for 278050 frames Cell Events: 8017 mean_circ: 0.946899
Ran for 278550 frames Cell Events: 8032 mean_circ: 0.946921
Ran for 279050 frames Cell Events: 8044 mean_circ: 0.946889
Ran for 279550 frames Cell Events: 8057 mean_circ: 0.94689
Ran for 280050 frames Cell Events: 8071 mean_circ: 0.946898
Ran for 280550 frames Cell Events: 8085 mean_circ: 0.946868
Ran for 281050 frames Cell Events: 8100 mean_circ: 0.946877
Ran for 282050 frames Cell Events: 8133 mean_circ: 0.946914



End this measurment..



Stopping time: 5.59107e+008
****************************************
Measurement finished

Mean Circularitiy: 0.946787
Mean Area: 616.326
Mean FL-1 intensity: 3870.34
Mean FL-2 intensity: 4234.94
Mean FL-3 intensity: 0

frames processed: 282001
Total Time: 141287ms
Number of Runs (new bg img) 0
Frames collected: 282419
Skipped frames: 7367
Rescued Frames: 1137761
Samples DAQ: 70605048
Samples written: 141209244
Samples per Channel: 70604622
FPS: 1998.9

Samples per second: 499723
Expected samples/s: 500000

Events: 8141
Events per second: 57.6201
jumped back (PMT): 6301
#Frames read, frequency
# 0 frames :386403
# 1 frames :158502
# 2 frames :6163
# 3 frames :2197
# 4 frames :1171
# 5 frames :496
# 6 frames :1318
# 7 frames :2466
# 8 frames :1013
# 9 frames :638
# 10 frames :1112
# 11 frames :896
# 12 frames :627
# 13 frames :377
# 14 frames :261
# 15 frames :231
# 16 frames :228
# 17 frames :187
# 18 frames :100
# 19 frames :74
# 20 frames :49
# 21 frames :61
# 22 frames :27
# 23 frames :36
# 24 frames :29
# 25 frames :24
# 26 frames :21
# 27 frames :17
# 28 frames :8
# 29 frames :12
# 30 frames :10
# 31 frames :9
# 32 frames :5
# 33 frames :4
# 34 frames :3
# 35 frames :2
# 37 frames :1
# 38 frames :1
# 40 frames :1
# 45 frames :3
# 52 frames :1
# 54 frames :2
# 60 frames :1
# 63 frames :1
# 64 frames :1
# 71 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.5595
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0