Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_19.42.59 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "1bb913e7630568924c471f30e9c17cdf",
"name": "M1_20170620_1616_dsRNA_T5_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "17:43:24"
}
}
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.9438
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 5.65541e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.933892
Ran for 550 frames Cell Events: 13 mean_circ: 0.963447
Ran for 1050 frames Cell Events: 34 mean_circ: 0.95748
Ran for 1550 frames Cell Events: 43 mean_circ: 0.954828
Ran for 2550 frames Cell Events: 78 mean_circ: 0.952644
Ran for 3050 frames Cell Events: 97 mean_circ: 0.951721
Ran for 3550 frames Cell Events: 111 mean_circ: 0.952537
Ran for 4550 frames Cell Events: 140 mean_circ: 0.952897
Ran for 5050 frames Cell Events: 162 mean_circ: 0.953503
Ran for 5550 frames Cell Events: 176 mean_circ: 0.95092
Ran for 6050 frames Cell Events: 189 mean_circ: 0.950992
Ran for 6550 frames Cell Events: 205 mean_circ: 0.951241
Ran for 8050 frames Cell Events: 252 mean_circ: 0.951109
Ran for 8550 frames Cell Events: 263 mean_circ: 0.951009
Ran for 9550 frames Cell Events: 292 mean_circ: 0.951453
Ran for 10050 frames Cell Events: 302 mean_circ: 0.952
Ran for 10550 frames Cell Events: 322 mean_circ: 0.951831
Ran for 11050 frames Cell Events: 339 mean_circ: 0.951784
Ran for 12050 frames Cell Events: 374 mean_circ: 0.951548
Ran for 14550 frames Cell Events: 446 mean_circ: 0.951773
Ran for 15050 frames Cell Events: 468 mean_circ: 0.951153
Ran for 15550 frames Cell Events: 483 mean_circ: 0.951055
Ran for 16050 frames Cell Events: 509 mean_circ: 0.950642
Ran for 17550 frames Cell Events: 577 mean_circ: 0.950066
Ran for 18050 frames Cell Events: 597 mean_circ: 0.950001
Ran for 18550 frames Cell Events: 614 mean_circ: 0.949958
Ran for 19050 frames Cell Events: 636 mean_circ: 0.950047
Ran for 19550 frames Cell Events: 648 mean_circ: 0.950149
Ran for 20050 frames Cell Events: 663 mean_circ: 0.949791
Ran for 21050 frames Cell Events: 695 mean_circ: 0.950122
Ran for 22050 frames Cell Events: 725 mean_circ: 0.950244
Ran for 22550 frames Cell Events: 741 mean_circ: 0.950395
Ran for 23050 frames Cell Events: 752 mean_circ: 0.950427
Ran for 23550 frames Cell Events: 764 mean_circ: 0.950386
Ran for 24050 frames Cell Events: 779 mean_circ: 0.950533
Ran for 24550 frames Cell Events: 803 mean_circ: 0.950784
Ran for 25050 frames Cell Events: 813 mean_circ: 0.951019
Ran for 25550 frames Cell Events: 831 mean_circ: 0.95105
Ran for 26050 frames Cell Events: 854 mean_circ: 0.951156
Ran for 27050 frames Cell Events: 884 mean_circ: 0.951258
Ran for 27550 frames Cell Events: 894 mean_circ: 0.951283
Ran for 28050 frames Cell Events: 904 mean_circ: 0.951063
Ran for 28550 frames Cell Events: 920 mean_circ: 0.951182
Ran for 29050 frames Cell Events: 940 mean_circ: 0.95127
Ran for 29550 frames Cell Events: 965 mean_circ: 0.951222
Ran for 30050 frames Cell Events: 981 mean_circ: 0.950983
Ran for 30550 frames Cell Events: 995 mean_circ: 0.950872
Ran for 32050 frames Cell Events: 1052 mean_circ: 0.950867
Ran for 32550 frames Cell Events: 1069 mean_circ: 0.950947
Ran for 33050 frames Cell Events: 1091 mean_circ: 0.950875
Ran for 33550 frames Cell Events: 1114 mean_circ: 0.950849
Ran for 34550 frames Cell Events: 1164 mean_circ: 0.950493
Ran for 35050 frames Cell Events: 1183 mean_circ: 0.950513
Ran for 36550 frames Cell Events: 1253 mean_circ: 0.949917
Ran for 37550 frames Cell Events: 1295 mean_circ: 0.950041
Ran for 38050 frames Cell Events: 1316 mean_circ: 0.949968
Ran for 39050 frames Cell Events: 1340 mean_circ: 0.949821
Ran for 39550 frames Cell Events: 1355 mean_circ: 0.949874
Ran for 40050 frames Cell Events: 1368 mean_circ: 0.950002
Ran for 40550 frames Cell Events: 1385 mean_circ: 0.949984
Ran for 41050 frames Cell Events: 1401 mean_circ: 0.950085
Ran for 41550 frames Cell Events: 1420 mean_circ: 0.950107
Ran for 42050 frames Cell Events: 1429 mean_circ: 0.95024
Ran for 42550 frames Cell Events: 1447 mean_circ: 0.949916
Ran for 43050 frames Cell Events: 1464 mean_circ: 0.949643
Ran for 43550 frames Cell Events: 1477 mean_circ: 0.94946
Ran for 44050 frames Cell Events: 1495 mean_circ: 0.949501
Ran for 44550 frames Cell Events: 1511 mean_circ: 0.949501
Ran for 46050 frames Cell Events: 1550 mean_circ: 0.949539
Ran for 47550 frames Cell Events: 1598 mean_circ: 0.949814
Ran for 48050 frames Cell Events: 1609 mean_circ: 0.949836
Ran for 48550 frames Cell Events: 1629 mean_circ: 0.949784
Ran for 50050 frames Cell Events: 1712 mean_circ: 0.949675
Ran for 50550 frames Cell Events: 1729 mean_circ: 0.949686
Ran for 51050 frames Cell Events: 1742 mean_circ: 0.949715
Ran for 51550 frames Cell Events: 1758 mean_circ: 0.949596
Ran for 52050 frames Cell Events: 1773 mean_circ: 0.949481
Ran for 52550 frames Cell Events: 1793 mean_circ: 0.949545
Ran for 53050 frames Cell Events: 1816 mean_circ: 0.949548
Ran for 54050 frames Cell Events: 1857 mean_circ: 0.949485
Ran for 55050 frames Cell Events: 1887 mean_circ: 0.949523
Ran for 56550 frames Cell Events: 1945 mean_circ: 0.949605
Ran for 57050 frames Cell Events: 1959 mean_circ: 0.949613
Ran for 58050 frames Cell Events: 2007 mean_circ: 0.949605
Ran for 59050 frames Cell Events: 2040 mean_circ: 0.949649
Ran for 59550 frames Cell Events: 2046 mean_circ: 0.949703
Ran for 60050 frames Cell Events: 2056 mean_circ: 0.949694
Ran for 60550 frames Cell Events: 2070 mean_circ: 0.949797
Ran for 61550 frames Cell Events: 2102 mean_circ: 0.949817
Ran for 62550 frames Cell Events: 2140 mean_circ: 0.949853
Ran for 63050 frames Cell Events: 2157 mean_circ: 0.949854
Ran for 64050 frames Cell Events: 2195 mean_circ: 0.949908
Ran for 65050 frames Cell Events: 2231 mean_circ: 0.949977
Ran for 66050 frames Cell Events: 2267 mean_circ: 0.949921
Ran for 66550 frames Cell Events: 2287 mean_circ: 0.949937
Ran for 67050 frames Cell Events: 2310 mean_circ: 0.949864
Ran for 68050 frames Cell Events: 2345 mean_circ: 0.949898
Ran for 68550 frames Cell Events: 2356 mean_circ: 0.949947
Ran for 69050 frames Cell Events: 2372 mean_circ: 0.949926
Ran for 69550 frames Cell Events: 2395 mean_circ: 0.950006
Ran for 70550 frames Cell Events: 2433 mean_circ: 0.949988
Ran for 71050 frames Cell Events: 2445 mean_circ: 0.950007
Ran for 71550 frames Cell Events: 2458 mean_circ: 0.949997
Ran for 72550 frames Cell Events: 2486 mean_circ: 0.950044
Ran for 73050 frames Cell Events: 2509 mean_circ: 0.950098
Ran for 74050 frames Cell Events: 2561 mean_circ: 0.950108
Ran for 74550 frames Cell Events: 2577 mean_circ: 0.950073
Ran for 75050 frames Cell Events: 2599 mean_circ: 0.950104
Ran for 76050 frames Cell Events: 2645 mean_circ: 0.950114
Ran for 78550 frames Cell Events: 2731 mean_circ: 0.950311
Ran for 79050 frames Cell Events: 2748 mean_circ: 0.950401
Ran for 79550 frames Cell Events: 2765 mean_circ: 0.950367
Ran for 80550 frames Cell Events: 2805 mean_circ: 0.950512
Ran for 81050 frames Cell Events: 2822 mean_circ: 0.950483
Ran for 81550 frames Cell Events: 2833 mean_circ: 0.950504
Ran for 82550 frames Cell Events: 2867 mean_circ: 0.950445
Ran for 83050 frames Cell Events: 2888 mean_circ: 0.950346
Ran for 83550 frames Cell Events: 2908 mean_circ: 0.950301
Ran for 85050 frames Cell Events: 2969 mean_circ: 0.950075
Ran for 86050 frames Cell Events: 3005 mean_circ: 0.950054
Ran for 87050 frames Cell Events: 3025 mean_circ: 0.95009
Ran for 87550 frames Cell Events: 3043 mean_circ: 0.950048
Ran for 88550 frames Cell Events: 3071 mean_circ: 0.950036
Ran for 89550 frames Cell Events: 3099 mean_circ: 0.950033
Ran for 90050 frames Cell Events: 3118 mean_circ: 0.950018
Ran for 91050 frames Cell Events: 3163 mean_circ: 0.949985
Ran for 91550 frames Cell Events: 3185 mean_circ: 0.949973
Ran for 92050 frames Cell Events: 3204 mean_circ: 0.949994
Ran for 92550 frames Cell Events: 3221 mean_circ: 0.950077
Ran for 94550 frames Cell Events: 3288 mean_circ: 0.950195
Ran for 95050 frames Cell Events: 3300 mean_circ: 0.950196
Ran for 96050 frames Cell Events: 3337 mean_circ: 0.950328
Ran for 97050 frames Cell Events: 3367 mean_circ: 0.950373
Ran for 98050 frames Cell Events: 3411 mean_circ: 0.950259
Ran for 100050 frames Cell Events: 3514 mean_circ: 0.950186
Ran for 100550 frames Cell Events: 3530 mean_circ: 0.950188
Ran for 101550 frames Cell Events: 3571 mean_circ: 0.950219
Ran for 102050 frames Cell Events: 3592 mean_circ: 0.950195
Ran for 103050 frames Cell Events: 3627 mean_circ: 0.950257
Ran for 103550 frames Cell Events: 3642 mean_circ: 0.950234
Ran for 105550 frames Cell Events: 3722 mean_circ: 0.950302
Ran for 106550 frames Cell Events: 3768 mean_circ: 0.950219
Ran for 107550 frames Cell Events: 3801 mean_circ: 0.950235
Ran for 110550 frames Cell Events: 3925 mean_circ: 0.950102
Ran for 111050 frames Cell Events: 3938 mean_circ: 0.950135
Ran for 111550 frames Cell Events: 3955 mean_circ: 0.950136
Ran for 112050 frames Cell Events: 3969 mean_circ: 0.950105
Ran for 112550 frames Cell Events: 3996 mean_circ: 0.950082
Ran for 113050 frames Cell Events: 4007 mean_circ: 0.950061
Ran for 113550 frames Cell Events: 4018 mean_circ: 0.950093
Ran for 114050 frames Cell Events: 4039 mean_circ: 0.950017
Ran for 114550 frames Cell Events: 4059 mean_circ: 0.950052
Ran for 115050 frames Cell Events: 4083 mean_circ: 0.950074
Ran for 115550 frames Cell Events: 4098 mean_circ: 0.950077
Ran for 116050 frames Cell Events: 4111 mean_circ: 0.95009
Ran for 116550 frames Cell Events: 4141 mean_circ: 0.950081
Ran for 117550 frames Cell Events: 4178 mean_circ: 0.949975
Ran for 119550 frames Cell Events: 4238 mean_circ: 0.94998
Ran for 120050 frames Cell Events: 4259 mean_circ: 0.949997
Ran for 120550 frames Cell Events: 4281 mean_circ: 0.949972
Ran for 121050 frames Cell Events: 4298 mean_circ: 0.949947
Ran for 121550 frames Cell Events: 4317 mean_circ: 0.949924
Ran for 122050 frames Cell Events: 4342 mean_circ: 0.949799
Ran for 125050 frames Cell Events: 4480 mean_circ: 0.949916
Ran for 125550 frames Cell Events: 4490 mean_circ: 0.949927
Ran for 127050 frames Cell Events: 4540 mean_circ: 0.949896
Ran for 127550 frames Cell Events: 4554 mean_circ: 0.94986
Ran for 128050 frames Cell Events: 4579 mean_circ: 0.94988
Ran for 128550 frames Cell Events: 4598 mean_circ: 0.949902
Ran for 129550 frames Cell Events: 4636 mean_circ: 0.949935
Ran for 130550 frames Cell Events: 4673 mean_circ: 0.949859
Ran for 131050 frames Cell Events: 4697 mean_circ: 0.949843
Ran for 131550 frames Cell Events: 4709 mean_circ: 0.949879
Ran for 132050 frames Cell Events: 4734 mean_circ: 0.949881
Ran for 132550 frames Cell Events: 4749 mean_circ: 0.94985
Ran for 133050 frames Cell Events: 4761 mean_circ: 0.949883
Ran for 133550 frames Cell Events: 4784 mean_circ: 0.949918
Ran for 134050 frames Cell Events: 4806 mean_circ: 0.949889
Ran for 135550 frames Cell Events: 4856 mean_circ: 0.949938
Ran for 136050 frames Cell Events: 4880 mean_circ: 0.949986
Ran for 136550 frames Cell Events: 4903 mean_circ: 0.949924
Ran for 137050 frames Cell Events: 4923 mean_circ: 0.949885
Ran for 137550 frames Cell Events: 4946 mean_circ: 0.949875
Ran for 138050 frames Cell Events: 4958 mean_circ: 0.949848
Ran for 138550 frames Cell Events: 4985 mean_circ: 0.949807
Ran for 139550 frames Cell Events: 5023 mean_circ: 0.949703
Ran for 142050 frames Cell Events: 5121 mean_circ: 0.949682
Ran for 143050 frames Cell Events: 5138 mean_circ: 0.949677
Ran for 143550 frames Cell Events: 5150 mean_circ: 0.949616
Ran for 144050 frames Cell Events: 5171 mean_circ: 0.949609
Ran for 144550 frames Cell Events: 5193 mean_circ: 0.949619
Ran for 146050 frames Cell Events: 5262 mean_circ: 0.94956
Ran for 146550 frames Cell Events: 5294 mean_circ: 0.949558
Ran for 147050 frames Cell Events: 5307 mean_circ: 0.949581
Ran for 149050 frames Cell Events: 5384 mean_circ: 0.949623
Ran for 149550 frames Cell Events: 5406 mean_circ: 0.949612
Ran for 150050 frames Cell Events: 5427 mean_circ: 0.949622
Ran for 152550 frames Cell Events: 5535 mean_circ: 0.94961
Ran for 153550 frames Cell Events: 5575 mean_circ: 0.949641
Ran for 154050 frames Cell Events: 5589 mean_circ: 0.949649
Ran for 155050 frames Cell Events: 5625 mean_circ: 0.949597
Ran for 155550 frames Cell Events: 5641 mean_circ: 0.949619
Ran for 156050 frames Cell Events: 5654 mean_circ: 0.949627
Ran for 156550 frames Cell Events: 5680 mean_circ: 0.94964
Ran for 157050 frames Cell Events: 5696 mean_circ: 0.949644
Ran for 157550 frames Cell Events: 5715 mean_circ: 0.949683
Ran for 158050 frames Cell Events: 5723 mean_circ: 0.949677
Ran for 158550 frames Cell Events: 5737 mean_circ: 0.949675
Ran for 159050 frames Cell Events: 5750 mean_circ: 0.94967
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Ran for 160550 frames Cell Events: 5806 mean_circ: 0.949731
Ran for 161050 frames Cell Events: 5825 mean_circ: 0.949758
Ran for 161550 frames Cell Events: 5843 mean_circ: 0.949741
Ran for 163550 frames Cell Events: 5904 mean_circ: 0.949778
Ran for 164050 frames Cell Events: 5912 mean_circ: 0.949764
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Ran for 165550 frames Cell Events: 5957 mean_circ: 0.949718
Ran for 166050 frames Cell Events: 5977 mean_circ: 0.949749
Ran for 167550 frames Cell Events: 6037 mean_circ: 0.949767
Ran for 168050 frames Cell Events: 6051 mean_circ: 0.949766
Ran for 168550 frames Cell Events: 6077 mean_circ: 0.949781
Ran for 169550 frames Cell Events: 6119 mean_circ: 0.949758
Ran for 170550 frames Cell Events: 6157 mean_circ: 0.949737
Ran for 171050 frames Cell Events: 6185 mean_circ: 0.949781
Ran for 172050 frames Cell Events: 6213 mean_circ: 0.949721
Ran for 172550 frames Cell Events: 6231 mean_circ: 0.949751
Ran for 173050 frames Cell Events: 6249 mean_circ: 0.949711
Ran for 173550 frames Cell Events: 6267 mean_circ: 0.949705
Ran for 174550 frames Cell Events: 6303 mean_circ: 0.949664
Ran for 175050 frames Cell Events: 6316 mean_circ: 0.949631
Ran for 175550 frames Cell Events: 6331 mean_circ: 0.949636
Ran for 176050 frames Cell Events: 6353 mean_circ: 0.949623
Ran for 176550 frames Cell Events: 6381 mean_circ: 0.949631
Ran for 177050 frames Cell Events: 6404 mean_circ: 0.949618
Ran for 177550 frames Cell Events: 6433 mean_circ: 0.949579
Ran for 178550 frames Cell Events: 6470 mean_circ: 0.94949
Ran for 179050 frames Cell Events: 6484 mean_circ: 0.949479
Ran for 179550 frames Cell Events: 6509 mean_circ: 0.94948
Ran for 180050 frames Cell Events: 6526 mean_circ: 0.949518
Ran for 180550 frames Cell Events: 6554 mean_circ: 0.949522
Ran for 181050 frames Cell Events: 6570 mean_circ: 0.949509
Ran for 182050 frames Cell Events: 6615 mean_circ: 0.949495
Ran for 183050 frames Cell Events: 6668 mean_circ: 0.949514
Ran for 184050 frames Cell Events: 6703 mean_circ: 0.949528
Ran for 184550 frames Cell Events: 6724 mean_circ: 0.949483
Ran for 185050 frames Cell Events: 6740 mean_circ: 0.949513
Ran for 186050 frames Cell Events: 6784 mean_circ: 0.949538
Ran for 186550 frames Cell Events: 6803 mean_circ: 0.949549
Ran for 187050 frames Cell Events: 6817 mean_circ: 0.949574
Ran for 188050 frames Cell Events: 6860 mean_circ: 0.94953
Ran for 188550 frames Cell Events: 6878 mean_circ: 0.94951
Ran for 189550 frames Cell Events: 6933 mean_circ: 0.949514
Ran for 190550 frames Cell Events: 6983 mean_circ: 0.949526
Ran for 194050 frames Cell Events: 7143 mean_circ: 0.949433
Ran for 194550 frames Cell Events: 7161 mean_circ: 0.949369
Ran for 196550 frames Cell Events: 7247 mean_circ: 0.949265
Ran for 197050 frames Cell Events: 7261 mean_circ: 0.949281
Ran for 197550 frames Cell Events: 7284 mean_circ: 0.949286
Ran for 198550 frames Cell Events: 7322 mean_circ: 0.949298
Ran for 199050 frames Cell Events: 7338 mean_circ: 0.949314
Ran for 199550 frames Cell Events: 7357 mean_circ: 0.949279
Ran for 200050 frames Cell Events: 7370 mean_circ: 0.949276
Ran for 200550 frames Cell Events: 7388 mean_circ: 0.949282
Ran for 201050 frames Cell Events: 7408 mean_circ: 0.949246
Ran for 201550 frames Cell Events: 7419 mean_circ: 0.949253
Ran for 202050 frames Cell Events: 7436 mean_circ: 0.949223
Ran for 202550 frames Cell Events: 7456 mean_circ: 0.949233
Ran for 203050 frames Cell Events: 7469 mean_circ: 0.949231
Ran for 203550 frames Cell Events: 7491 mean_circ: 0.949237
Ran for 204550 frames Cell Events: 7523 mean_circ: 0.949256
Ran for 205050 frames Cell Events: 7542 mean_circ: 0.949255
Ran for 205550 frames Cell Events: 7563 mean_circ: 0.94929
Ran for 206050 frames Cell Events: 7591 mean_circ: 0.949251
Ran for 207550 frames Cell Events: 7649 mean_circ: 0.949287
Ran for 208550 frames Cell Events: 7698 mean_circ: 0.949306
Ran for 209050 frames Cell Events: 7714 mean_circ: 0.949297
Ran for 209550 frames Cell Events: 7732 mean_circ: 0.949264
Ran for 210050 frames Cell Events: 7745 mean_circ: 0.949259
Ran for 210550 frames Cell Events: 7763 mean_circ: 0.949264
Ran for 211050 frames Cell Events: 7782 mean_circ: 0.949292
Ran for 211550 frames Cell Events: 7807 mean_circ: 0.949298
Ran for 212550 frames Cell Events: 7853 mean_circ: 0.949301
Ran for 213050 frames Cell Events: 7875 mean_circ: 0.949332
Ran for 213550 frames Cell Events: 7896 mean_circ: 0.949313
Ran for 214050 frames Cell Events: 7911 mean_circ: 0.949252
Ran for 214550 frames Cell Events: 7924 mean_circ: 0.949253
Ran for 215050 frames Cell Events: 7945 mean_circ: 0.949249
Ran for 216550 frames Cell Events: 8009 mean_circ: 0.949233
Ran for 217550 frames Cell Events: 8043 mean_circ: 0.949228
Ran for 218050 frames Cell Events: 8071 mean_circ: 0.949229
Ran for 218550 frames Cell Events: 8081 mean_circ: 0.949222
Ran for 219550 frames Cell Events: 8104 mean_circ: 0.949241
Ran for 220050 frames Cell Events: 8130 mean_circ: 0.949249
Ran for 221550 frames Cell Events: 8193 mean_circ: 0.949317
Ran for 222050 frames Cell Events: 8209 mean_circ: 0.9493
Ran for 225050 frames Cell Events: 8334 mean_circ: 0.94927
Ran for 226050 frames Cell Events: 8367 mean_circ: 0.949274
Ran for 226550 frames Cell Events: 8379 mean_circ: 0.949251
Ran for 227050 frames Cell Events: 8394 mean_circ: 0.949252
Ran for 228050 frames Cell Events: 8421 mean_circ: 0.949312
Ran for 228550 frames Cell Events: 8440 mean_circ: 0.949316
Ran for 229050 frames Cell Events: 8456 mean_circ: 0.949321
Ran for 229550 frames Cell Events: 8481 mean_circ: 0.949316
Ran for 230050 frames Cell Events: 8510 mean_circ: 0.949301
Ran for 230550 frames Cell Events: 8529 mean_circ: 0.949273
Ran for 231050 frames Cell Events: 8548 mean_circ: 0.949289
Ran for 231550 frames Cell Events: 8559 mean_circ: 0.949295
Ran for 232550 frames Cell Events: 8583 mean_circ: 0.949271
Ran for 233050 frames Cell Events: 8604 mean_circ: 0.949262
Ran for 233550 frames Cell Events: 8618 mean_circ: 0.949268
Ran for 234050 frames Cell Events: 8632 mean_circ: 0.949271
Ran for 234550 frames Cell Events: 8659 mean_circ: 0.949288
Ran for 236550 frames Cell Events: 8726 mean_circ: 0.949297
Ran for 237050 frames Cell Events: 8755 mean_circ: 0.94928
Ran for 238050 frames Cell Events: 8800 mean_circ: 0.949293
Ran for 238550 frames Cell Events: 8824 mean_circ: 0.949284
Ran for 239050 frames Cell Events: 8839 mean_circ: 0.949291
Ran for 239550 frames Cell Events: 8869 mean_circ: 0.9493
Ran for 240050 frames Cell Events: 8890 mean_circ: 0.949304
Ran for 240550 frames Cell Events: 8908 mean_circ: 0.949256
Ran for 242050 frames Cell Events: 8975 mean_circ: 0.949224
Ran for 242550 frames Cell Events: 8993 mean_circ: 0.949217
Ran for 243550 frames Cell Events: 9040 mean_circ: 0.949246
Ran for 244550 frames Cell Events: 9087 mean_circ: 0.94927
Ran for 245550 frames Cell Events: 9121 mean_circ: 0.949221
Ran for 246550 frames Cell Events: 9162 mean_circ: 0.949237
Ran for 247550 frames Cell Events: 9202 mean_circ: 0.949261
Ran for 248050 frames Cell Events: 9215 mean_circ: 0.949263
Ran for 249550 frames Cell Events: 9275 mean_circ: 0.949285
Ran for 250050 frames Cell Events: 9293 mean_circ: 0.949318
Ran for 251050 frames Cell Events: 9323 mean_circ: 0.94934
Ran for 251550 frames Cell Events: 9342 mean_circ: 0.949306
Ran for 252550 frames Cell Events: 9376 mean_circ: 0.949265
Ran for 253550 frames Cell Events: 9408 mean_circ: 0.949278
Ran for 254050 frames Cell Events: 9423 mean_circ: 0.949299
Ran for 254550 frames Cell Events: 9445 mean_circ: 0.94932
Ran for 255050 frames Cell Events: 9457 mean_circ: 0.949341
Ran for 256550 frames Cell Events: 9513 mean_circ: 0.949343
Ran for 257550 frames Cell Events: 9552 mean_circ: 0.94938
Ran for 258050 frames Cell Events: 9575 mean_circ: 0.949364
Ran for 258550 frames Cell Events: 9594 mean_circ: 0.949386
Ran for 259550 frames Cell Events: 9629 mean_circ: 0.949392
Ran for 260050 frames Cell Events: 9647 mean_circ: 0.949423
Ran for 263050 frames Cell Events: 9797 mean_circ: 0.949365
Ran for 264050 frames Cell Events: 9828 mean_circ: 0.949389
Ran for 264550 frames Cell Events: 9841 mean_circ: 0.949403
Ran for 265050 frames Cell Events: 9859 mean_circ: 0.949403
Ran for 266050 frames Cell Events: 9896 mean_circ: 0.949402



End this measurment.
because stop condition (time/nr of cells) was met

Stopping time: 5.65676e+008
****************************************
Measurement finished

Mean Circularitiy: 0.949405
Mean Area: 618.699
Mean FL-1 intensity: 3916.11
Mean FL-2 intensity: 4073.97
Mean FL-3 intensity: 0

frames processed: 267392
Total Time: 134171ms
Number of Runs (new bg img) 0
Frames collected: 268173
Skipped frames: 44740
Rescued Frames: 2607806
Samples DAQ: 67043505
Samples written: 134086422
Samples per Channel: 67043211
FPS: 1998.74

Samples per second: 499686
Expected samples/s: 500000

Events: 10002
Events per second: 74.5468
jumped back (PMT): 6194
#Frames read, frequency
# 0 frames :391058
# 1 frames :123705
# 2 frames :6417
# 3 frames :2074
# 4 frames :1187
# 5 frames :822
# 6 frames :741
# 7 frames :3120
# 8 frames :1224
# 9 frames :945
# 10 frames :780
# 11 frames :1136
# 12 frames :687
# 13 frames :422
# 14 frames :342
# 15 frames :302
# 16 frames :232
# 17 frames :230
# 18 frames :167
# 19 frames :123
# 20 frames :84
# 21 frames :76
# 22 frames :69
# 23 frames :52
# 24 frames :55
# 25 frames :31
# 26 frames :27
# 27 frames :23
# 28 frames :22
# 29 frames :24
# 30 frames :11
# 31 frames :11
# 32 frames :15
# 33 frames :14
# 34 frames :9
# 35 frames :10
# 36 frames :5
# 37 frames :8
# 38 frames :5
# 39 frames :5
# 40 frames :2
# 41 frames :1
# 42 frames :5
# 43 frames :3
# 44 frames :1
# 45 frames :1
# 46 frames :3
# 47 frames :1
# 49 frames :3
# 50 frames :3
# 51 frames :1
# 52 frames :2
# 54 frames :2
# 56 frames :1
# 57 frames :1
# 59 frames :1
# 70 frames :1
# 75 frames :1
# 93 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.9438
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0