[experiment]
date = 2020-12-09
event count = 9224
run index = 2
sample = 201209_17_TG_RhoA_Colon_CD45_Epcam
time = 16:05:53

[fluorescence]
bit depth = 16
channel 1 name = 525/50
channel 3 name = 700/75
channel count = 2
channels installed = 3
laser 1 lambda = 488.000000000000
laser 1 power = 1.500000000000
laser 3 lambda = 640.000000000000
laser 3 power = 15.000000000000
laser count = 2
lasers installed = 3
sample rate = 1000000.000000000000
samples per event = 561
signal max = 1.000000000000
signal min = -1.000000000000
trace median = 7

[imaging]
flash device = LED (ZMD L1)
flash duration = 2.000000000000
frame rate = 1600.000000000000
pixel size = 0.337000012398
roi position x = 629.000000000000
roi position y = 490.000000000000
roi size x = 250
roi size y = 80

[online_contour]
bin area min = 10
bin kernel = 5
bin threshold = -6
image blur = 0
no absdiff = True

[online_filter]
area_ratio max = 1.049999952316
area_ratio min = 1.000000000000
area_ratio soft limit = True
area_um max = 1500.000000000000
area_um min = 10.000000000000
area_um soft limit = False
deform max = 0.200000002980
deform min = 0.000000000000
deform soft limit = True
size_x max = 80
size_x min = 1
size_x soft limit = False
size_y max = 80
size_y min = 1
size_y soft limit = False

[setup]
channel width = 20.000000000000
chip region = channel
flow rate = 0.059999998659
flow rate sample = 0.014999999665
flow rate sheath = 0.045000001788
identifier = ZMDD-AcC-04682c-208b19
medium = CellCarrierB
module composition = AcCellerator,FluorescenceModule
software version = 2.1.1.0
temperature = 26.000000000000

[experiment]
date = 2020-12-09
event count = 9782
run index = 1
sample = 201209_17_TG_RhoA_Colon_CD45_Epcam
time = 16:26:11

[fluorescence]
bit depth = 16
channel 1 name = 525/50
channel 3 name = 700/75
channel count = 2
channels installed = 3
laser 1 lambda = 488.000000000000
laser 1 power = 1.500000000000
laser 3 lambda = 640.000000000000
laser 3 power = 15.000000000000
laser count = 2
lasers installed = 3
sample rate = 1000000.000000000000
samples per event = 561
signal max = 1.000000000000
signal min = -1.000000000000
trace median = 7

[imaging]
flash device = LED (ZMD L1)
flash duration = 2.000000000000
frame rate = 1600.000000000000
pixel size = 0.337000012398
roi position x = 629.000000000000
roi position y = 490.000000000000
roi size x = 250
roi size y = 80

[online_contour]
bin area min = 10
bin kernel = 5
bin threshold = -6
image blur = 0
no absdiff = True

[online_filter]
area_ratio max = 1.049999952316
area_ratio min = 1.000000000000
area_ratio soft limit = True
area_um max = 1500.000000000000
area_um min = 10.000000000000
area_um soft limit = False
deform max = 0.200000002980
deform min = 0.000000000000
deform soft limit = True
size_x max = 80
size_x min = 1
size_x soft limit = False
size_y max = 80
size_y min = 1
size_y soft limit = False

[setup]
channel width = 20.000000000000
chip region = channel
flow rate = 0.059999998659
flow rate sample = 0.014999999665
flow rate sheath = 0.045000001788
identifier = ZMDD-AcC-04682c-208b19
medium = CellCarrierB
module composition = AcCellerator,FluorescenceModule
software version = 2.1.1.0
temperature = 26.100000381470

[experiment]
date = 2020-12-09
event count = 3760
run index = 3
sample = 201209_17_TG_RhoA_Colon_CD45_Epcam
time = 16:45:21

[fluorescence]
bit depth = 16
channel 1 name = 525/50
channel 3 name = 700/75
channel count = 2
channels installed = 3
laser 1 lambda = 488.000000000000
laser 1 power = 1.500000000000
laser 3 lambda = 640.000000000000
laser 3 power = 15.000000000000
laser count = 2
lasers installed = 3
sample rate = 1000000.000000000000
samples per event = 561
signal max = 1.000000000000
signal min = -1.000000000000
trace median = 7

[imaging]
flash device = LED (ZMD L1)
flash duration = 2.000000000000
frame rate = 1600.000000000000
pixel size = 0.337000012398
roi position x = 629.000000000000
roi position y = 490.000000000000
roi size x = 250
roi size y = 80

[online_contour]
bin area min = 10
bin kernel = 5
bin threshold = -6
image blur = 0
no absdiff = True

[online_filter]
area_ratio max = 1.049999952316
area_ratio min = 1.000000000000
area_ratio soft limit = True
area_um max = 1500.000000000000
area_um min = 10.000000000000
area_um soft limit = False
deform max = 0.200000002980
deform min = 0.000000000000
deform soft limit = True
size_x max = 80
size_x min = 1
size_x soft limit = False
size_y max = 80
size_y min = 1
size_y soft limit = False

[setup]
channel width = 20.000000000000
chip region = channel
flow rate = 0.059999998659
flow rate sample = 0.014999999665
flow rate sheath = 0.045000001788
identifier = ZMDD-AcC-04682c-208b19
medium = CellCarrierB
module composition = AcCellerator,FluorescenceModule
software version = 2.1.1.0
temperature = 26.299999237061

[experiment]
date = 2020-12-09
event count = 5169
run index = 4
sample = 201209_17_TG_RhoA_Colon_CD45_Epcam
time = 16:50:46

[fluorescence]
bit depth = 16
channel 1 name = 525/50
channel 3 name = 700/75
channel count = 2
channels installed = 3
laser 1 lambda = 488.000000000000
laser 1 power = 1.500000000000
laser 3 lambda = 640.000000000000
laser 3 power = 15.000000000000
laser count = 2
lasers installed = 3
sample rate = 1000000.000000000000
samples per event = 561
signal max = 1.000000000000
signal min = -1.000000000000
trace median = 7

[imaging]
flash device = LED (ZMD L1)
flash duration = 2.000000000000
frame rate = 1600.000000000000
pixel size = 0.337000012398
roi position x = 629.000000000000
roi position y = 490.000000000000
roi size x = 250
roi size y = 80

[online_contour]
bin area min = 10
bin kernel = 5
bin threshold = -6
image blur = 0
no absdiff = True

[online_filter]
area_ratio max = 1.049999952316
area_ratio min = 1.000000000000
area_ratio soft limit = True
area_um max = 1500.000000000000
area_um min = 10.000000000000
area_um soft limit = False
deform max = 0.200000002980
deform min = 0.000000000000
deform soft limit = True
size_x max = 80
size_x min = 1
size_x soft limit = False
size_y max = 80
size_y min = 1
size_y soft limit = False

[setup]
channel width = 20.000000000000
chip region = channel
flow rate = 0.059999998659
flow rate sample = 0.014999999665
flow rate sheath = 0.045000001788
identifier = ZMDD-AcC-04682c-208b19
medium = CellCarrierB
module composition = AcCellerator,FluorescenceModule
software version = 2.1.1.0
temperature = 26.299999237061

[
  {
    "libraries": {
      "dckit": "0.14.5",
      "dclab": "0.47.0",
      "h5py": "3.7.0",
      "imageio": "2.10.3",
      "nptdms": "1.6.0",
      "numpy": "1.23.5"
    },
    "python": {
      "build": "tags/v3.8.0:fa919fd, Oct 14 2019 19:37:50",
      "implementation": "CPython",
      "version": "3.8.0"
    },
    "system": {
      "info": "Windows-10-10.0.18362-SP0",
      "machine": "AMD64",
      "name": "Windows",
      "release": "10",
      "version": "10.0.18362"
    },
    "task": {
      "name": "update metadata",
      "new": {
        "experiment:sample": "KO_S17_Tumour"
      },
      "old": {
        "experiment:sample": "Combined_S17_TG_RhoA_Colon_CD45_Epcam"
      }
    },
    "utc": {
      "date": "2023-01-18",
      "time": "21:17:11"
    }
  },
  {
    "libraries": {
      "dckit": "0.14.5",
      "dclab": "0.47.0",
      "h5py": "3.7.0",
      "imageio": "2.10.3",
      "nptdms": "1.6.0",
      "numpy": "1.23.5"
    },
    "python": {
      "build": "tags/v3.8.0:fa919fd, Oct 14 2019 19:37:50",
      "implementation": "CPython",
      "version": "3.8.0"
    },
    "system": {
      "info": "Windows-10-10.0.18362-SP0",
      "machine": "AMD64",
      "name": "Windows",
      "release": "10",
      "version": "10.0.18362"
    },
    "task": {
      "name": "update metadata",
      "new": {
        "experiment:sample": "KO_S17_Tumour_S13"
      },
      "old": {
        "experiment:sample": "KO_S17_Tumour"
      }
    },
    "utc": {
      "date": "2023-01-18",
      "time": "22:38:34"
    }
  },
  {
    "libraries": {
      "dckit": "0.14.5",
      "dclab": "0.47.0",
      "h5py": "3.7.0",
      "imageio": "2.10.3",
      "nptdms": "1.6.0",
      "numpy": "1.23.5"
    },
    "python": {
      "build": "tags/v3.8.0:fa919fd, Oct 14 2019 19:37:50",
      "implementation": "CPython",
      "version": "3.8.0"
    },
    "system": {
      "info": "Windows-10-10.0.18362-SP0",
      "machine": "AMD64",
      "name": "Windows",
      "release": "10",
      "version": "10.0.18362"
    },
    "task": {
      "name": "update metadata",
      "new": {
        "experiment:sample": "Tumour_S13"
      },
      "old": {
        "experiment:sample": "KO_S17_Tumour_S13"
      }
    },
    "utc": {
      "date": "2023-01-18",
      "time": "22:38:49"
    }
  }
]

{
  "files": [
    {
      "index": 1,
      "md5-5M": "75d381d0b9b15dfff4bd90437b087070",
      "name": "Tumour_S13.rtdc"
    }
  ],
  "libraries": {
    "dclab": "0.47.2",
    "h5py": "3.7.0",
    "numpy": "1.23.5"
  },
  "python": {
    "build": "tags/v3.9.13:6de2ca5, May 17 2022 16:36:42",
    "implementation": "CPython",
    "version": "3.9.13"
  },
  "system": {
    "info": "Windows-10-10.0.18363-SP0",
    "machine": "AMD64",
    "name": "Windows",
    "release": "10",
    "version": "10.0.18363"
  },
  "utc": {
    "date": "2023-01-19",
    "time": "22:22:30"
  }
}

WrongConfigurationTypeWarning
 in dclab.rtdc_dataset.config line 77:
   Type of confguration key [fluorescence]: sample rate should be <class 'numbers.Integral'>, got
   <class 'numpy.float64'>!
WrongConfigurationTypeWarning
 in dclab.rtdc_dataset.config line 77:
   Type of confguration key [imaging]: roi position x should be <class 'numbers.Integral'>, got
   <class 'numpy.float64'>!
WrongConfigurationTypeWarning
 in dclab.rtdc_dataset.config line 77:
   Type of confguration key [imaging]: roi position y should be <class 'numbers.Integral'>, got
   <class 'numpy.float64'>!

{
  "files": [
    {
      "index": 1,
      "name": "M002_data.rtdc",
      "sha256": "01f93bd71d66ab82394014209bca36db522ac9295ea7067c36308270dbff2fcb"
    },
    {
      "index": 2,
      "name": "M001_data.rtdc",
      "sha256": "c04d660f4bae9503cc88eb94b77381e6844583b7c060a991b38a06ed5927bcc8"
    },
    {
      "index": 3,
      "name": "M003_data.rtdc",
      "sha256": "3a357d69c8d49046c41f3be37d351a47b55029dce1457022b48272ca97ab06dd"
    },
    {
      "index": 4,
      "name": "M004_data.rtdc",
      "sha256": "7a1e1a80707762fffb8d565797e42ad00dcc581baccd72d4abeed1af1dce970e"
    }
  ],
  "libraries": {
    "dclab": "0.29.1",
    "h5py": "2.10.0",
    "imageio": "2.9.0",
    "nptdms": "1.0.0",
    "numpy": "1.19.2"
  },
  "python": {
    "build": "tags/v3.6.8:3c6b436a57, Dec 24 2018 00:16:47",
    "implementation": "CPython",
    "version": "3.6.8"
  },
  "system": {
    "info": "Windows-10-10.0.17134-SP0",
    "machine": "AMD64",
    "name": "Windows",
    "release": "10",
    "version": "10.0.17134"
  },
  "utc": {
    "date": "2020-12-09",
    "time": "16:07:45"
  }
}

[LOG] number of written datasets 0
[LOG] number of written datasets 1000
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[LOG] number of written datasets 9000

[LOG] number of written datasets 0
[LOG] number of written datasets 1000
[LOG] number of written datasets 2000
[LOG] number of written datasets 3000
[LOG] number of written datasets 4000
[LOG] number of written datasets 5000
[LOG] number of written datasets 6000
[LOG] number of written datasets 7000
[LOG] number of written datasets 8000
[LOG] number of written datasets 9000

[LOG] number of written datasets 0
[LOG] number of written datasets 1000
[LOG] number of written datasets 2000
[LOG] number of written datasets 3000

[LOG] number of written datasets 0
[LOG] number of written datasets 1000
[LOG] number of written datasets 2000
[LOG] number of written datasets 3000
[LOG] number of written datasets 4000
[LOG] number of written datasets 5000