Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_11.46.46 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "943bab0d7969a2bfeb77351a52622b46",
"name": "M1_20170530_1901_dsRNA_A5_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "09:47:07"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 7980 (max 7981) in '7980'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.6239
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.33429e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 16 mean_circ: 0.930163
Ran for 1050 frames Cell Events: 30 mean_circ: 0.938367
Ran for 1550 frames Cell Events: 38 mean_circ: 0.94409
Ran for 2050 frames Cell Events: 49 mean_circ: 0.940685
Ran for 2550 frames Cell Events: 62 mean_circ: 0.937153
Ran for 4550 frames Cell Events: 105 mean_circ: 0.935959
Ran for 5050 frames Cell Events: 117 mean_circ: 0.935969
Ran for 6050 frames Cell Events: 139 mean_circ: 0.936519
Ran for 6550 frames Cell Events: 145 mean_circ: 0.936987
Ran for 7050 frames Cell Events: 158 mean_circ: 0.936847
Ran for 8050 frames Cell Events: 181 mean_circ: 0.937091
Ran for 8550 frames Cell Events: 192 mean_circ: 0.937103
Ran for 9050 frames Cell Events: 202 mean_circ: 0.937299
Ran for 9550 frames Cell Events: 220 mean_circ: 0.938553
Ran for 10050 frames Cell Events: 230 mean_circ: 0.93911
Ran for 10550 frames Cell Events: 242 mean_circ: 0.938875
Ran for 11550 frames Cell Events: 258 mean_circ: 0.938264
Ran for 12050 frames Cell Events: 269 mean_circ: 0.9376
Ran for 12550 frames Cell Events: 278 mean_circ: 0.937491
Ran for 13550 frames Cell Events: 305 mean_circ: 0.93794
Ran for 14550 frames Cell Events: 332 mean_circ: 0.938356
Ran for 15050 frames Cell Events: 343 mean_circ: 0.938931
Ran for 15550 frames Cell Events: 348 mean_circ: 0.939216
Ran for 16050 frames Cell Events: 357 mean_circ: 0.938936
Ran for 16550 frames Cell Events: 371 mean_circ: 0.938491
Ran for 17050 frames Cell Events: 383 mean_circ: 0.93787
Ran for 17550 frames Cell Events: 391 mean_circ: 0.937908
Ran for 18050 frames Cell Events: 412 mean_circ: 0.938414
Ran for 18550 frames Cell Events: 424 mean_circ: 0.93885
Ran for 19050 frames Cell Events: 438 mean_circ: 0.93908
Ran for 19550 frames Cell Events: 451 mean_circ: 0.938861
Ran for 20050 frames Cell Events: 459 mean_circ: 0.938913
Ran for 20550 frames Cell Events: 464 mean_circ: 0.938871
Ran for 21050 frames Cell Events: 475 mean_circ: 0.93907
Ran for 22050 frames Cell Events: 496 mean_circ: 0.939025
Ran for 22550 frames Cell Events: 513 mean_circ: 0.939218
Ran for 23050 frames Cell Events: 531 mean_circ: 0.939626
Ran for 24050 frames Cell Events: 563 mean_circ: 0.939331
Ran for 24550 frames Cell Events: 577 mean_circ: 0.93916
Ran for 25550 frames Cell Events: 606 mean_circ: 0.939151
Ran for 26050 frames Cell Events: 618 mean_circ: 0.93976
Ran for 26550 frames Cell Events: 626 mean_circ: 0.939758
Ran for 27050 frames Cell Events: 639 mean_circ: 0.939914
Ran for 27550 frames Cell Events: 650 mean_circ: 0.940033
Ran for 28050 frames Cell Events: 669 mean_circ: 0.93989
Ran for 28550 frames Cell Events: 673 mean_circ: 0.939664
Ran for 29050 frames Cell Events: 682 mean_circ: 0.93944
Ran for 29550 frames Cell Events: 704 mean_circ: 0.93983
Ran for 30050 frames Cell Events: 719 mean_circ: 0.939989
Ran for 30550 frames Cell Events: 729 mean_circ: 0.939938
Ran for 31050 frames Cell Events: 735 mean_circ: 0.939828
Ran for 32050 frames Cell Events: 768 mean_circ: 0.939224
Ran for 32550 frames Cell Events: 778 mean_circ: 0.939194
Ran for 33050 frames Cell Events: 790 mean_circ: 0.939017
Ran for 35050 frames Cell Events: 837 mean_circ: 0.939034
Ran for 35550 frames Cell Events: 845 mean_circ: 0.939081
Ran for 36050 frames Cell Events: 857 mean_circ: 0.939061
Ran for 37050 frames Cell Events: 868 mean_circ: 0.939157
Ran for 37550 frames Cell Events: 881 mean_circ: 0.939288
Ran for 38050 frames Cell Events: 896 mean_circ: 0.939601
Ran for 38550 frames Cell Events: 902 mean_circ: 0.939557
Ran for 39050 frames Cell Events: 913 mean_circ: 0.939381
Ran for 39550 frames Cell Events: 926 mean_circ: 0.939409
Ran for 40050 frames Cell Events: 930 mean_circ: 0.93933
Ran for 41050 frames Cell Events: 968 mean_circ: 0.939177
Ran for 41550 frames Cell Events: 978 mean_circ: 0.939253
Ran for 42050 frames Cell Events: 991 mean_circ: 0.939326
Ran for 42550 frames Cell Events: 997 mean_circ: 0.939066
Ran for 43050 frames Cell Events: 1011 mean_circ: 0.939147
Ran for 43550 frames Cell Events: 1018 mean_circ: 0.939055
Ran for 44050 frames Cell Events: 1029 mean_circ: 0.938937
Ran for 45050 frames Cell Events: 1047 mean_circ: 0.939188
Ran for 45550 frames Cell Events: 1057 mean_circ: 0.939035
Ran for 46050 frames Cell Events: 1070 mean_circ: 0.939068
Ran for 46550 frames Cell Events: 1084 mean_circ: 0.939144
Ran for 47050 frames Cell Events: 1103 mean_circ: 0.939276
Ran for 47550 frames Cell Events: 1114 mean_circ: 0.939203
Ran for 49050 frames Cell Events: 1150 mean_circ: 0.938961
Ran for 49550 frames Cell Events: 1161 mean_circ: 0.938893
Ran for 51050 frames Cell Events: 1207 mean_circ: 0.938896
Ran for 51550 frames Cell Events: 1220 mean_circ: 0.938975
Ran for 52050 frames Cell Events: 1243 mean_circ: 0.939139
Ran for 52550 frames Cell Events: 1252 mean_circ: 0.939168
Ran for 53050 frames Cell Events: 1262 mean_circ: 0.939074
Ran for 53550 frames Cell Events: 1274 mean_circ: 0.939094
Ran for 54050 frames Cell Events: 1286 mean_circ: 0.939129
Ran for 54550 frames Cell Events: 1297 mean_circ: 0.939045
Ran for 55050 frames Cell Events: 1312 mean_circ: 0.939193
Ran for 55550 frames Cell Events: 1324 mean_circ: 0.939345
Ran for 57050 frames Cell Events: 1369 mean_circ: 0.939339
Ran for 58050 frames Cell Events: 1396 mean_circ: 0.939489
Ran for 58550 frames Cell Events: 1406 mean_circ: 0.939513
Ran for 59050 frames Cell Events: 1422 mean_circ: 0.939625
Ran for 59550 frames Cell Events: 1434 mean_circ: 0.939519
Ran for 60050 frames Cell Events: 1449 mean_circ: 0.939588
Ran for 61050 frames Cell Events: 1478 mean_circ: 0.939674
Ran for 63550 frames Cell Events: 1558 mean_circ: 0.939693
Ran for 64050 frames Cell Events: 1581 mean_circ: 0.939712
Ran for 64550 frames Cell Events: 1589 mean_circ: 0.93961
Ran for 65050 frames Cell Events: 1600 mean_circ: 0.939754
Ran for 66050 frames Cell Events: 1628 mean_circ: 0.939817
Ran for 66550 frames Cell Events: 1640 mean_circ: 0.939554
Ran for 67050 frames Cell Events: 1652 mean_circ: 0.939537
Ran for 68050 frames Cell Events: 1672 mean_circ: 0.939691
Ran for 68550 frames Cell Events: 1681 mean_circ: 0.939702
Ran for 69050 frames Cell Events: 1691 mean_circ: 0.939728
Ran for 69550 frames Cell Events: 1699 mean_circ: 0.939816
Ran for 70050 frames Cell Events: 1705 mean_circ: 0.939721
Ran for 70550 frames Cell Events: 1725 mean_circ: 0.939723
Ran for 71050 frames Cell Events: 1741 mean_circ: 0.939722
Ran for 71550 frames Cell Events: 1755 mean_circ: 0.939585
Ran for 72050 frames Cell Events: 1769 mean_circ: 0.939659
Ran for 72550 frames Cell Events: 1781 mean_circ: 0.939577
Ran for 73550 frames Cell Events: 1802 mean_circ: 0.939416
Ran for 74050 frames Cell Events: 1825 mean_circ: 0.939302
Ran for 74550 frames Cell Events: 1835 mean_circ: 0.939346
Ran for 75550 frames Cell Events: 1852 mean_circ: 0.939334
Ran for 76550 frames Cell Events: 1873 mean_circ: 0.939364
Ran for 77050 frames Cell Events: 1878 mean_circ: 0.939331
Ran for 77550 frames Cell Events: 1896 mean_circ: 0.939424
Ran for 78050 frames Cell Events: 1905 mean_circ: 0.939469
Ran for 78550 frames Cell Events: 1914 mean_circ: 0.939524
Ran for 79050 frames Cell Events: 1927 mean_circ: 0.939561
Ran for 80550 frames Cell Events: 1974 mean_circ: 0.93965
Ran for 81050 frames Cell Events: 1980 mean_circ: 0.939688
Ran for 81550 frames Cell Events: 1994 mean_circ: 0.939756
Ran for 82050 frames Cell Events: 2013 mean_circ: 0.939791
Ran for 83050 frames Cell Events: 2038 mean_circ: 0.939679
Ran for 84050 frames Cell Events: 2077 mean_circ: 0.939443
Ran for 85050 frames Cell Events: 2102 mean_circ: 0.939471
Ran for 85550 frames Cell Events: 2111 mean_circ: 0.939468
Ran for 86050 frames Cell Events: 2123 mean_circ: 0.93952
Ran for 86550 frames Cell Events: 2132 mean_circ: 0.939535
Ran for 87050 frames Cell Events: 2142 mean_circ: 0.939577
Ran for 87550 frames Cell Events: 2150 mean_circ: 0.939525
Ran for 88050 frames Cell Events: 2161 mean_circ: 0.93956
Ran for 89050 frames Cell Events: 2179 mean_circ: 0.939586
Ran for 89550 frames Cell Events: 2192 mean_circ: 0.939624
Ran for 90050 frames Cell Events: 2200 mean_circ: 0.939551
Ran for 90550 frames Cell Events: 2212 mean_circ: 0.939479
Ran for 91550 frames Cell Events: 2236 mean_circ: 0.939467
Ran for 92050 frames Cell Events: 2251 mean_circ: 0.939466
Ran for 92550 frames Cell Events: 2262 mean_circ: 0.939479
Ran for 93550 frames Cell Events: 2289 mean_circ: 0.939404
Ran for 94050 frames Cell Events: 2298 mean_circ: 0.939399
Ran for 94550 frames Cell Events: 2308 mean_circ: 0.939336
Ran for 96050 frames Cell Events: 2350 mean_circ: 0.93927
Ran for 96550 frames Cell Events: 2363 mean_circ: 0.939208
Ran for 97050 frames Cell Events: 2369 mean_circ: 0.939196
Ran for 97550 frames Cell Events: 2387 mean_circ: 0.939008
Ran for 98550 frames Cell Events: 2404 mean_circ: 0.938918
Ran for 99050 frames Cell Events: 2417 mean_circ: 0.93891
Ran for 99550 frames Cell Events: 2428 mean_circ: 0.938876
Ran for 100050 frames Cell Events: 2435 mean_circ: 0.938887
Ran for 100550 frames Cell Events: 2453 mean_circ: 0.938968
Ran for 101050 frames Cell Events: 2469 mean_circ: 0.939032
Ran for 101550 frames Cell Events: 2480 mean_circ: 0.939152
Ran for 102050 frames Cell Events: 2482 mean_circ: 0.939164
Ran for 102550 frames Cell Events: 2497 mean_circ: 0.939104
Ran for 103050 frames Cell Events: 2502 mean_circ: 0.939162
Ran for 103550 frames Cell Events: 2512 mean_circ: 0.939143
Ran for 104050 frames Cell Events: 2520 mean_circ: 0.938953
Ran for 104550 frames Cell Events: 2535 mean_circ: 0.938924
Ran for 105050 frames Cell Events: 2543 mean_circ: 0.938788
Ran for 105550 frames Cell Events: 2555 mean_circ: 0.938755
Ran for 106550 frames Cell Events: 2575 mean_circ: 0.938849
Ran for 107050 frames Cell Events: 2591 mean_circ: 0.938875
Ran for 108050 frames Cell Events: 2619 mean_circ: 0.938779
Ran for 108550 frames Cell Events: 2630 mean_circ: 0.938709
Ran for 109050 frames Cell Events: 2643 mean_circ: 0.938659
Ran for 109550 frames Cell Events: 2651 mean_circ: 0.938694
Ran for 110050 frames Cell Events: 2657 mean_circ: 0.938734
Ran for 110550 frames Cell Events: 2668 mean_circ: 0.938729
Ran for 111550 frames Cell Events: 2692 mean_circ: 0.938824
Ran for 112050 frames Cell Events: 2703 mean_circ: 0.938805
Ran for 112550 frames Cell Events: 2721 mean_circ: 0.938782
Ran for 113050 frames Cell Events: 2728 mean_circ: 0.938674
Ran for 113550 frames Cell Events: 2736 mean_circ: 0.938668
Ran for 114050 frames Cell Events: 2746 mean_circ: 0.938648
Ran for 114550 frames Cell Events: 2758 mean_circ: 0.938689
Ran for 115050 frames Cell Events: 2770 mean_circ: 0.938664
Ran for 115550 frames Cell Events: 2782 mean_circ: 0.938689
Ran for 116050 frames Cell Events: 2785 mean_circ: 0.93873
Ran for 117550 frames Cell Events: 2812 mean_circ: 0.938752
Ran for 118050 frames Cell Events: 2825 mean_circ: 0.938823
Ran for 119050 frames Cell Events: 2846 mean_circ: 0.938735
Ran for 119550 frames Cell Events: 2857 mean_circ: 0.938796
Ran for 120050 frames Cell Events: 2874 mean_circ: 0.938772
Ran for 120550 frames Cell Events: 2880 mean_circ: 0.938833
Ran for 121050 frames Cell Events: 2896 mean_circ: 0.938869
Ran for 121550 frames Cell Events: 2915 mean_circ: 0.938839
Ran for 122550 frames Cell Events: 2939 mean_circ: 0.93889
Ran for 123050 frames Cell Events: 2950 mean_circ: 0.938859
Ran for 123550 frames Cell Events: 2959 mean_circ: 0.938832
Ran for 124050 frames Cell Events: 2966 mean_circ: 0.938824
Ran for 124550 frames Cell Events: 2979 mean_circ: 0.938849
Ran for 125050 frames Cell Events: 2996 mean_circ: 0.938802
Ran for 125550 frames Cell Events: 3006 mean_circ: 0.938771
Ran for 126050 frames Cell Events: 3018 mean_circ: 0.938841
Ran for 126550 frames Cell Events: 3026 mean_circ: 0.938796
Ran for 127050 frames Cell Events: 3030 mean_circ: 0.938819
Ran for 127550 frames Cell Events: 3044 mean_circ: 0.93861
Ran for 128050 frames Cell Events: 3056 mean_circ: 0.938704
Ran for 128550 frames Cell Events: 3065 mean_circ: 0.938715
Ran for 129050 frames Cell Events: 3075 mean_circ: 0.938738
Ran for 129550 frames Cell Events: 3095 mean_circ: 0.938706
Ran for 130050 frames Cell Events: 3110 mean_circ: 0.938743
Ran for 130550 frames Cell Events: 3129 mean_circ: 0.938788
Ran for 131550 frames Cell Events: 3159 mean_circ: 0.938884
Ran for 133050 frames Cell Events: 3192 mean_circ: 0.938762
Ran for 133550 frames Cell Events: 3208 mean_circ: 0.93878
Ran for 134550 frames Cell Events: 3241 mean_circ: 0.93886
Ran for 135050 frames Cell Events: 3254 mean_circ: 0.93891
Ran for 135550 frames Cell Events: 3261 mean_circ: 0.938906
Ran for 136050 frames Cell Events: 3272 mean_circ: 0.938914
Ran for 138050 frames Cell Events: 3349 mean_circ: 0.939014
Ran for 138550 frames Cell Events: 3365 mean_circ: 0.939026
Ran for 139050 frames Cell Events: 3376 mean_circ: 0.939062
Ran for 140550 frames Cell Events: 3427 mean_circ: 0.939003
Ran for 141050 frames Cell Events: 3443 mean_circ: 0.939047
Ran for 141550 frames Cell Events: 3463 mean_circ: 0.938862
Ran for 142050 frames Cell Events: 3473 mean_circ: 0.938871
Ran for 143050 frames Cell Events: 3490 mean_circ: 0.938845
Ran for 143550 frames Cell Events: 3504 mean_circ: 0.938875
Ran for 144050 frames Cell Events: 3529 mean_circ: 0.938824
Ran for 144550 frames Cell Events: 3543 mean_circ: 0.938859
Ran for 145050 frames Cell Events: 3560 mean_circ: 0.938742
Ran for 145550 frames Cell Events: 3569 mean_circ: 0.938751
Ran for 146550 frames Cell Events: 3601 mean_circ: 0.938767
Ran for 147550 frames Cell Events: 3639 mean_circ: 0.938839
Ran for 148550 frames Cell Events: 3671 mean_circ: 0.938732
Ran for 149050 frames Cell Events: 3680 mean_circ: 0.938733
Ran for 149550 frames Cell Events: 3690 mean_circ: 0.9388
Ran for 150550 frames Cell Events: 3713 mean_circ: 0.938859
Ran for 151050 frames Cell Events: 3730 mean_circ: 0.938777
Ran for 152550 frames Cell Events: 3786 mean_circ: 0.938452
Ran for 153050 frames Cell Events: 3794 mean_circ: 0.938497
Ran for 153550 frames Cell Events: 3801 mean_circ: 0.938514
Ran for 155550 frames Cell Events: 3861 mean_circ: 0.938453
Ran for 156050 frames Cell Events: 3867 mean_circ: 0.93843
Ran for 157050 frames Cell Events: 3895 mean_circ: 0.938372
Ran for 157550 frames Cell Events: 3903 mean_circ: 0.938381
Ran for 158550 frames Cell Events: 3938 mean_circ: 0.938412
Ran for 159050 frames Cell Events: 3956 mean_circ: 0.938301
Ran for 159550 frames Cell Events: 3985 mean_circ: 0.938342
Ran for 160050 frames Cell Events: 3996 mean_circ: 0.938405
Ran for 160550 frames Cell Events: 4006 mean_circ: 0.938431
Ran for 161050 frames Cell Events: 4018 mean_circ: 0.93845
Ran for 161550 frames Cell Events: 4020 mean_circ: 0.938433
Ran for 162050 frames Cell Events: 4038 mean_circ: 0.938406
Ran for 162550 frames Cell Events: 4047 mean_circ: 0.938435
Ran for 163050 frames Cell Events: 4060 mean_circ: 0.938443
Ran for 163550 frames Cell Events: 4073 mean_circ: 0.938441
Ran for 164050 frames Cell Events: 4082 mean_circ: 0.938441
Ran for 164550 frames Cell Events: 4102 mean_circ: 0.938482
Ran for 165050 frames Cell Events: 4117 mean_circ: 0.938497
Ran for 165550 frames Cell Events: 4128 mean_circ: 0.938525
Ran for 166050 frames Cell Events: 4139 mean_circ: 0.938513
Ran for 167550 frames Cell Events: 4190 mean_circ: 0.93844
Ran for 168050 frames Cell Events: 4202 mean_circ: 0.938476
Ran for 168550 frames Cell Events: 4213 mean_circ: 0.938467
Ran for 169050 frames Cell Events: 4225 mean_circ: 0.938404
Ran for 169550 frames Cell Events: 4236 mean_circ: 0.938423
Ran for 170050 frames Cell Events: 4253 mean_circ: 0.938474
Ran for 170550 frames Cell Events: 4262 mean_circ: 0.938506
Ran for 171050 frames Cell Events: 4281 mean_circ: 0.93852
Ran for 171550 frames Cell Events: 4293 mean_circ: 0.938541
Ran for 172050 frames Cell Events: 4305 mean_circ: 0.938593
Ran for 172550 frames Cell Events: 4325 mean_circ: 0.938627
Ran for 173050 frames Cell Events: 4331 mean_circ: 0.938636
Ran for 173550 frames Cell Events: 4341 mean_circ: 0.938616
Ran for 174050 frames Cell Events: 4358 mean_circ: 0.938603
Ran for 175050 frames Cell Events: 4393 mean_circ: 0.938651
Ran for 175550 frames Cell Events: 4404 mean_circ: 0.938712
Ran for 176550 frames Cell Events: 4424 mean_circ: 0.938691
Ran for 177050 frames Cell Events: 4435 mean_circ: 0.938705
Ran for 177550 frames Cell Events: 4455 mean_circ: 0.93868
Ran for 178050 frames Cell Events: 4487 mean_circ: 0.938644
Ran for 180550 frames Cell Events: 4554 mean_circ: 0.938638
Ran for 181050 frames Cell Events: 4566 mean_circ: 0.938578
Ran for 181550 frames Cell Events: 4584 mean_circ: 0.938558
Ran for 182050 frames Cell Events: 4599 mean_circ: 0.938602
Ran for 182550 frames Cell Events: 4610 mean_circ: 0.938619
Ran for 183050 frames Cell Events: 4620 mean_circ: 0.938658
Ran for 183550 frames Cell Events: 4639 mean_circ: 0.938677
Ran for 184550 frames Cell Events: 4665 mean_circ: 0.938575
Ran for 185050 frames Cell Events: 4672 mean_circ: 0.938556
Ran for 185550 frames Cell Events: 4680 mean_circ: 0.938588
Ran for 186050 frames Cell Events: 4687 mean_circ: 0.938591
Ran for 186550 frames Cell Events: 4703 mean_circ: 0.938627
Ran for 187050 frames Cell Events: 4712 mean_circ: 0.938602
Ran for 188050 frames Cell Events: 4733 mean_circ: 0.938621
Ran for 188550 frames Cell Events: 4747 mean_circ: 0.938631
Ran for 189050 frames Cell Events: 4758 mean_circ: 0.938641
Ran for 189550 frames Cell Events: 4774 mean_circ: 0.938608
Ran for 190050 frames Cell Events: 4796 mean_circ: 0.938596
Ran for 190550 frames Cell Events: 4814 mean_circ: 0.938608
Ran for 191050 frames Cell Events: 4823 mean_circ: 0.938588
Ran for 191550 frames Cell Events: 4833 mean_circ: 0.93856
Ran for 192050 frames Cell Events: 4847 mean_circ: 0.93853
Ran for 192550 frames Cell Events: 4866 mean_circ: 0.938559
Ran for 193050 frames Cell Events: 4875 mean_circ: 0.938572
Ran for 193550 frames Cell Events: 4885 mean_circ: 0.938603
Ran for 194550 frames Cell Events: 4910 mean_circ: 0.938581
Ran for 195050 frames Cell Events: 4922 mean_circ: 0.938611
Ran for 195550 frames Cell Events: 4937 mean_circ: 0.938639
Ran for 196550 frames Cell Events: 4975 mean_circ: 0.938533
Ran for 197050 frames Cell Events: 4991 mean_circ: 0.938507
Ran for 197550 frames Cell Events: 4995 mean_circ: 0.938508
Ran for 198050 frames Cell Events: 5001 mean_circ: 0.938533
Ran for 198550 frames Cell Events: 5016 mean_circ: 0.938565
Ran for 199550 frames Cell Events: 5055 mean_circ: 0.938572
Ran for 200550 frames Cell Events: 5074 mean_circ: 0.938559
Ran for 201050 frames Cell Events: 5087 mean_circ: 0.938554
Ran for 201550 frames Cell Events: 5100 mean_circ: 0.938564
Ran for 202050 frames Cell Events: 5114 mean_circ: 0.93857
Ran for 202550 frames Cell Events: 5127 mean_circ: 0.938552
Ran for 203050 frames Cell Events: 5137 mean_circ: 0.938475
Ran for 204050 frames Cell Events: 5159 mean_circ: 0.938455
Ran for 206550 frames Cell Events: 5213 mean_circ: 0.938489
Ran for 207550 frames Cell Events: 5249 mean_circ: 0.938535
Ran for 208550 frames Cell Events: 5272 mean_circ: 0.938547
Ran for 209050 frames Cell Events: 5291 mean_circ: 0.938558
Ran for 210050 frames Cell Events: 5305 mean_circ: 0.938562
Ran for 210550 frames Cell Events: 5325 mean_circ: 0.938546
Ran for 211050 frames Cell Events: 5337 mean_circ: 0.938506
Ran for 212050 frames Cell Events: 5355 mean_circ: 0.938535
Ran for 212550 frames Cell Events: 5364 mean_circ: 0.938507
Ran for 213050 frames Cell Events: 5378 mean_circ: 0.938491
Ran for 213550 frames Cell Events: 5388 mean_circ: 0.938543
Ran for 214050 frames Cell Events: 5400 mean_circ: 0.938558
Ran for 214550 frames Cell Events: 5411 mean_circ: 0.938595
Ran for 215050 frames Cell Events: 5422 mean_circ: 0.938573
Ran for 215550 frames Cell Events: 5431 mean_circ: 0.938569
Ran for 216050 frames Cell Events: 5447 mean_circ: 0.938534
Ran for 216550 frames Cell Events: 5460 mean_circ: 0.938583
Ran for 217050 frames Cell Events: 5476 mean_circ: 0.938566
Ran for 218050 frames Cell Events: 5513 mean_circ: 0.938632
Ran for 219050 frames Cell Events: 5530 mean_circ: 0.938631
Ran for 219550 frames Cell Events: 5541 mean_circ: 0.938596
Ran for 220050 frames Cell Events: 5556 mean_circ: 0.938621
Ran for 220550 frames Cell Events: 5569 mean_circ: 0.938606
Ran for 221050 frames Cell Events: 5592 mean_circ: 0.938647
Ran for 221550 frames Cell Events: 5602 mean_circ: 0.938673
Ran for 222050 frames Cell Events: 5609 mean_circ: 0.938665
Ran for 223050 frames Cell Events: 5633 mean_circ: 0.938692
Ran for 223550 frames Cell Events: 5648 mean_circ: 0.938674
Ran for 224050 frames Cell Events: 5661 mean_circ: 0.93867
Ran for 224550 frames Cell Events: 5668 mean_circ: 0.938689
Ran for 225550 frames Cell Events: 5704 mean_circ: 0.938738
Ran for 226550 frames Cell Events: 5742 mean_circ: 0.938697
Ran for 227550 frames Cell Events: 5774 mean_circ: 0.938687
Ran for 228050 frames Cell Events: 5791 mean_circ: 0.938701
Ran for 228550 frames Cell Events: 5805 mean_circ: 0.938706
Ran for 230050 frames Cell Events: 5843 mean_circ: 0.938723
Ran for 230550 frames Cell Events: 5857 mean_circ: 0.938707
Ran for 231050 frames Cell Events: 5872 mean_circ: 0.938727
Ran for 231550 frames Cell Events: 5880 mean_circ: 0.938743
Ran for 232050 frames Cell Events: 5894 mean_circ: 0.938762
Ran for 233050 frames Cell Events: 5918 mean_circ: 0.938746
Ran for 233550 frames Cell Events: 5933 mean_circ: 0.938762
Ran for 234050 frames Cell Events: 5939 mean_circ: 0.93878
Ran for 234550 frames Cell Events: 5952 mean_circ: 0.938784
Ran for 235050 frames Cell Events: 5957 mean_circ: 0.938766
Ran for 235550 frames Cell Events: 5979 mean_circ: 0.93878
Ran for 236050 frames Cell Events: 5993 mean_circ: 0.938772
Ran for 236550 frames Cell Events: 6013 mean_circ: 0.938752
Ran for 237050 frames Cell Events: 6027 mean_circ: 0.938748
Ran for 238050 frames Cell Events: 6055 mean_circ: 0.938703
Ran for 239050 frames Cell Events: 6079 mean_circ: 0.938716
Ran for 239550 frames Cell Events: 6094 mean_circ: 0.938737
Ran for 240050 frames Cell Events: 6102 mean_circ: 0.938729
Ran for 240550 frames Cell Events: 6122 mean_circ: 0.938748
Ran for 241050 frames Cell Events: 6137 mean_circ: 0.938743
Ran for 242050 frames Cell Events: 6166 mean_circ: 0.93878
Ran for 242550 frames Cell Events: 6176 mean_circ: 0.938774
Ran for 243050 frames Cell Events: 6194 mean_circ: 0.938759
Ran for 243550 frames Cell Events: 6210 mean_circ: 0.938766
Ran for 244050 frames Cell Events: 6229 mean_circ: 0.938783
Ran for 244550 frames Cell Events: 6247 mean_circ: 0.938783
Ran for 245050 frames Cell Events: 6256 mean_circ: 0.938818
Ran for 245550 frames Cell Events: 6273 mean_circ: 0.938836
Ran for 246050 frames Cell Events: 6295 mean_circ: 0.938821
Ran for 246550 frames Cell Events: 6306 mean_circ: 0.938813
Ran for 247050 frames Cell Events: 6330 mean_circ: 0.938823
Ran for 247550 frames Cell Events: 6339 mean_circ: 0.938851
Ran for 248550 frames Cell Events: 6358 mean_circ: 0.93881
Ran for 249050 frames Cell Events: 6371 mean_circ: 0.938823
Ran for 250050 frames Cell Events: 6408 mean_circ: 0.938826
Ran for 250550 frames Cell Events: 6420 mean_circ: 0.938844
Ran for 251050 frames Cell Events: 6428 mean_circ: 0.938855
Ran for 252550 frames Cell Events: 6464 mean_circ: 0.938865
Ran for 253050 frames Cell Events: 6482 mean_circ: 0.938863
Ran for 253550 frames Cell Events: 6498 mean_circ: 0.938844
Ran for 254050 frames Cell Events: 6514 mean_circ: 0.938849
Ran for 254550 frames Cell Events: 6531 mean_circ: 0.938802
Ran for 255050 frames Cell Events: 6544 mean_circ: 0.938802
Ran for 255550 frames Cell Events: 6554 mean_circ: 0.938776
Ran for 257050 frames Cell Events: 6597 mean_circ: 0.938811
Ran for 257550 frames Cell Events: 6605 mean_circ: 0.938807
Ran for 258050 frames Cell Events: 6616 mean_circ: 0.938821
Ran for 258550 frames Cell Events: 6628 mean_circ: 0.938842
Ran for 259050 frames Cell Events: 6644 mean_circ: 0.938883
Ran for 260050 frames Cell Events: 6652 mean_circ: 0.938877
Ran for 261050 frames Cell Events: 6680 mean_circ: 0.938893
Ran for 261550 frames Cell Events: 6698 mean_circ: 0.938869
Ran for 262050 frames Cell Events: 6709 mean_circ: 0.938874
Ran for 262550 frames Cell Events: 6727 mean_circ: 0.938884
Ran for 263050 frames Cell Events: 6735 mean_circ: 0.938898
Ran for 264050 frames Cell Events: 6755 mean_circ: 0.938847
Ran for 264550 frames Cell Events: 6765 mean_circ: 0.938865
Ran for 265050 frames Cell Events: 6774 mean_circ: 0.938891
Ran for 265550 frames Cell Events: 6790 mean_circ: 0.938901
Ran for 266550 frames Cell Events: 6821 mean_circ: 0.938833
Ran for 267050 frames Cell Events: 6832 mean_circ: 0.938831
Ran for 267550 frames Cell Events: 6847 mean_circ: 0.938846
Ran for 268550 frames Cell Events: 6880 mean_circ: 0.938847
Ran for 269550 frames Cell Events: 6905 mean_circ: 0.938852
Ran for 271050 frames Cell Events: 6938 mean_circ: 0.938901
Ran for 272050 frames Cell Events: 6969 mean_circ: 0.938907
Ran for 272550 frames Cell Events: 6985 mean_circ: 0.938904
Ran for 273050 frames Cell Events: 6996 mean_circ: 0.938908
Ran for 273550 frames Cell Events: 7008 mean_circ: 0.938924
Ran for 274050 frames Cell Events: 7024 mean_circ: 0.938928
Ran for 274550 frames Cell Events: 7035 mean_circ: 0.938971
Ran for 275550 frames Cell Events: 7067 mean_circ: 0.938913
Ran for 276050 frames Cell Events: 7085 mean_circ: 0.938945
Ran for 276550 frames Cell Events: 7094 mean_circ: 0.938934
Ran for 277050 frames Cell Events: 7105 mean_circ: 0.938965
Ran for 277550 frames Cell Events: 7117 mean_circ: 0.93895
Ran for 279550 frames Cell Events: 7180 mean_circ: 0.93897
Ran for 280050 frames Cell Events: 7192 mean_circ: 0.938996
Ran for 280550 frames Cell Events: 7202 mean_circ: 0.938971
Ran for 281050 frames Cell Events: 7212 mean_circ: 0.938966
Ran for 281550 frames Cell Events: 7226 mean_circ: 0.938973
Ran for 282050 frames Cell Events: 7237 mean_circ: 0.93894
Ran for 282550 frames Cell Events: 7253 mean_circ: 0.938968
Ran for 283050 frames Cell Events: 7266 mean_circ: 0.938954
Ran for 283550 frames Cell Events: 7280 mean_circ: 0.938945
Ran for 284050 frames Cell Events: 7288 mean_circ: 0.938947
Ran for 284550 frames Cell Events: 7300 mean_circ: 0.938985
Ran for 285050 frames Cell Events: 7317 mean_circ: 0.939004
Ran for 285550 frames Cell Events: 7329 mean_circ: 0.938942
Ran for 286050 frames Cell Events: 7335 mean_circ: 0.93894
Ran for 286550 frames Cell Events: 7353 mean_circ: 0.93893
Ran for 287050 frames Cell Events: 7364 mean_circ: 0.938942
Ran for 287550 frames Cell Events: 7368 mean_circ: 0.938949
Ran for 288050 frames Cell Events: 7379 mean_circ: 0.938917
Ran for 288550 frames Cell Events: 7394 mean_circ: 0.938898
Ran for 289550 frames Cell Events: 7417 mean_circ: 0.938878
Ran for 290050 frames Cell Events: 7431 mean_circ: 0.938901
Ran for 290550 frames Cell Events: 7443 mean_circ: 0.9389
Ran for 291050 frames Cell Events: 7453 mean_circ: 0.93889
Ran for 291550 frames Cell Events: 7460 mean_circ: 0.938907
Ran for 292050 frames Cell Events: 7477 mean_circ: 0.938922
Ran for 292550 frames Cell Events: 7491 mean_circ: 0.938899
Ran for 293050 frames Cell Events: 7505 mean_circ: 0.938909
Ran for 293550 frames Cell Events: 7519 mean_circ: 0.938853
Ran for 294050 frames Cell Events: 7540 mean_circ: 0.938833
Ran for 294550 frames Cell Events: 7561 mean_circ: 0.938778
Ran for 295050 frames Cell Events: 7576 mean_circ: 0.938779
Ran for 296050 frames Cell Events: 7606 mean_circ: 0.93873
Ran for 297050 frames Cell Events: 7646 mean_circ: 0.938721
Ran for 297550 frames Cell Events: 7660 mean_circ: 0.938729
Ran for 298050 frames Cell Events: 7673 mean_circ: 0.938759
Ran for 299050 frames Cell Events: 7698 mean_circ: 0.938762
Ran for 299550 frames Cell Events: 7708 mean_circ: 0.938754
Ran for 300050 frames Cell Events: 7731 mean_circ: 0.938754
Ran for 300550 frames Cell Events: 7749 mean_circ: 0.938784
Ran for 301550 frames Cell Events: 7806 mean_circ: 0.938805
Ran for 302050 frames Cell Events: 7826 mean_circ: 0.938778
Ran for 302550 frames Cell Events: 7839 mean_circ: 0.938787
Ran for 303050 frames Cell Events: 7856 mean_circ: 0.938745
Ran for 303550 frames Cell Events: 7876 mean_circ: 0.938744
Ran for 304050 frames Cell Events: 7890 mean_circ: 0.938756
Ran for 304550 frames Cell Events: 7909 mean_circ: 0.938793
Ran for 306550 frames Cell Events: 7959 mean_circ: 0.938815
Ran for 307050 frames Cell Events: 7974 mean_circ: 0.938818



End this measurment..



Stopping time: 1.33444e+009
****************************************
Measurement finished

Mean Circularitiy: 0.938822
Mean Area: 619.397
Mean FL-1 intensity: 2597.56
Mean FL-2 intensity: 3654.27
Mean FL-3 intensity: 0

frames processed: 306284
Total Time: 153758ms
Number of Runs (new bg img) 0
Frames collected: 307331
Skipped frames: 73750
Rescued Frames: 3525259
Samples DAQ: 76832733
Samples written: 153665326
Samples per Channel: 76832663
FPS: 1998.8

Samples per second: 499700
Expected samples/s: 500000

Events: 7981
Events per second: 51.9064
jumped back (PMT): 6051
#Frames read, frequency
# 0 frames :402206
# 1 frames :192595
# 2 frames :6462
# 3 frames :1999
# 4 frames :1040
# 5 frames :342
# 6 frames :2180
# 7 frames :2573
# 8 frames :1628
# 9 frames :793
# 10 frames :579
# 11 frames :484
# 12 frames :482
# 13 frames :335
# 14 frames :237
# 15 frames :164
# 16 frames :131
# 17 frames :77
# 18 frames :57
# 19 frames :51
# 20 frames :40
# 21 frames :29
# 22 frames :30
# 23 frames :24
# 24 frames :18
# 25 frames :14
# 26 frames :4
# 27 frames :8
# 28 frames :13
# 29 frames :5
# 30 frames :11
# 31 frames :6
# 32 frames :1
# 34 frames :1
# 36 frames :4
# 38 frames :1
# 41 frames :1
# 42 frames :2
# 45 frames :1
# 49 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.6239
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0