Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-09_19.03.07 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "0a2fa7f93e5ba4fd995b005b9c195801",
"name": "M1_20170521_1726_dsRNA_B6_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "17:03:35"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8739 (max 8740) in '8739'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.0543
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 5.51025e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 21 mean_circ: 0.944785
Ran for 1550 frames Cell Events: 32 mean_circ: 0.939413
Ran for 2550 frames Cell Events: 44 mean_circ: 0.934325
Ran for 3550 frames Cell Events: 69 mean_circ: 0.925537
Ran for 4050 frames Cell Events: 77 mean_circ: 0.927089
Ran for 4550 frames Cell Events: 94 mean_circ: 0.928345
Ran for 5050 frames Cell Events: 97 mean_circ: 0.929602
Ran for 5550 frames Cell Events: 115 mean_circ: 0.932114
Ran for 6550 frames Cell Events: 167 mean_circ: 0.929017
Ran for 7050 frames Cell Events: 186 mean_circ: 0.929617
Ran for 7550 frames Cell Events: 196 mean_circ: 0.929615
Ran for 8050 frames Cell Events: 200 mean_circ: 0.92864
Ran for 8550 frames Cell Events: 207 mean_circ: 0.929474
Ran for 9050 frames Cell Events: 211 mean_circ: 0.92984
Ran for 10050 frames Cell Events: 237 mean_circ: 0.930794
Ran for 10550 frames Cell Events: 253 mean_circ: 0.930213
Ran for 12050 frames Cell Events: 263 mean_circ: 0.930449
Ran for 13050 frames Cell Events: 276 mean_circ: 0.931122
Ran for 13550 frames Cell Events: 286 mean_circ: 0.931821
Ran for 14050 frames Cell Events: 294 mean_circ: 0.931909
Ran for 14550 frames Cell Events: 302 mean_circ: 0.932005
Ran for 15550 frames Cell Events: 315 mean_circ: 0.932553
Ran for 16050 frames Cell Events: 322 mean_circ: 0.933099
Ran for 16550 frames Cell Events: 338 mean_circ: 0.932317
Ran for 17050 frames Cell Events: 350 mean_circ: 0.932335
Ran for 18050 frames Cell Events: 370 mean_circ: 0.932973
Ran for 18550 frames Cell Events: 377 mean_circ: 0.932552
Ran for 19050 frames Cell Events: 385 mean_circ: 0.932593
Ran for 20050 frames Cell Events: 413 mean_circ: 0.931235
Ran for 20550 frames Cell Events: 427 mean_circ: 0.931148
Ran for 21050 frames Cell Events: 433 mean_circ: 0.931404
Ran for 21550 frames Cell Events: 442 mean_circ: 0.9307
Ran for 22050 frames Cell Events: 448 mean_circ: 0.930767
Ran for 23050 frames Cell Events: 466 mean_circ: 0.930364
Ran for 23550 frames Cell Events: 474 mean_circ: 0.930442
Ran for 24050 frames Cell Events: 485 mean_circ: 0.930421
Ran for 24550 frames Cell Events: 498 mean_circ: 0.930632
Ran for 25550 frames Cell Events: 516 mean_circ: 0.931281
Ran for 26050 frames Cell Events: 527 mean_circ: 0.931318
Ran for 26550 frames Cell Events: 534 mean_circ: 0.93143
Ran for 27050 frames Cell Events: 546 mean_circ: 0.930888
Ran for 27550 frames Cell Events: 556 mean_circ: 0.930494
Ran for 28050 frames Cell Events: 570 mean_circ: 0.930622
Ran for 28550 frames Cell Events: 575 mean_circ: 0.930262
Ran for 29050 frames Cell Events: 583 mean_circ: 0.930362
Ran for 29550 frames Cell Events: 591 mean_circ: 0.930665
Ran for 30050 frames Cell Events: 601 mean_circ: 0.930927
Ran for 30550 frames Cell Events: 607 mean_circ: 0.930987
Ran for 31050 frames Cell Events: 613 mean_circ: 0.931208
Ran for 31550 frames Cell Events: 621 mean_circ: 0.931381
Ran for 32050 frames Cell Events: 628 mean_circ: 0.931367
Ran for 32550 frames Cell Events: 630 mean_circ: 0.931452
Ran for 33550 frames Cell Events: 647 mean_circ: 0.931934
Ran for 34050 frames Cell Events: 657 mean_circ: 0.931809
Ran for 34550 frames Cell Events: 664 mean_circ: 0.931856
Ran for 35050 frames Cell Events: 689 mean_circ: 0.931824
Ran for 35550 frames Cell Events: 694 mean_circ: 0.931863
Ran for 36050 frames Cell Events: 700 mean_circ: 0.931999
Ran for 36550 frames Cell Events: 703 mean_circ: 0.93173
Ran for 37050 frames Cell Events: 710 mean_circ: 0.931415
Ran for 37550 frames Cell Events: 722 mean_circ: 0.931322
Ran for 38550 frames Cell Events: 742 mean_circ: 0.931463
Ran for 39050 frames Cell Events: 758 mean_circ: 0.93153
Ran for 39550 frames Cell Events: 765 mean_circ: 0.931598
Ran for 40050 frames Cell Events: 776 mean_circ: 0.931253
Ran for 40550 frames Cell Events: 780 mean_circ: 0.930971
Ran for 41050 frames Cell Events: 789 mean_circ: 0.930555
Ran for 41550 frames Cell Events: 793 mean_circ: 0.930624
Ran for 42550 frames Cell Events: 819 mean_circ: 0.930695
Ran for 43050 frames Cell Events: 822 mean_circ: 0.930572
Ran for 43550 frames Cell Events: 835 mean_circ: 0.930221
Ran for 44050 frames Cell Events: 843 mean_circ: 0.930212
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Ran for 46550 frames Cell Events: 876 mean_circ: 0.930253
Ran for 47050 frames Cell Events: 881 mean_circ: 0.930139
Ran for 47550 frames Cell Events: 885 mean_circ: 0.930159
Ran for 48050 frames Cell Events: 897 mean_circ: 0.930322
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Ran for 50550 frames Cell Events: 929 mean_circ: 0.930228
Ran for 51050 frames Cell Events: 938 mean_circ: 0.930313
Ran for 51550 frames Cell Events: 950 mean_circ: 0.930281
Ran for 52050 frames Cell Events: 969 mean_circ: 0.930324
Ran for 52550 frames Cell Events: 972 mean_circ: 0.930297
Ran for 53050 frames Cell Events: 984 mean_circ: 0.930573
Ran for 54050 frames Cell Events: 1008 mean_circ: 0.93052
Ran for 54550 frames Cell Events: 1015 mean_circ: 0.93022
Ran for 55050 frames Cell Events: 1027 mean_circ: 0.930165
Ran for 55550 frames Cell Events: 1049 mean_circ: 0.929934
Ran for 56050 frames Cell Events: 1075 mean_circ: 0.929736
Ran for 56550 frames Cell Events: 1081 mean_circ: 0.929667
Ran for 57050 frames Cell Events: 1087 mean_circ: 0.929553
Ran for 57550 frames Cell Events: 1096 mean_circ: 0.929712
Ran for 59050 frames Cell Events: 1120 mean_circ: 0.929745
Ran for 59550 frames Cell Events: 1141 mean_circ: 0.929302
Ran for 60050 frames Cell Events: 1143 mean_circ: 0.929332
Ran for 60550 frames Cell Events: 1151 mean_circ: 0.929303
Ran for 61550 frames Cell Events: 1185 mean_circ: 0.929018
Ran for 62050 frames Cell Events: 1192 mean_circ: 0.929028
Ran for 63050 frames Cell Events: 1214 mean_circ: 0.929478
Ran for 63550 frames Cell Events: 1220 mean_circ: 0.929598
Ran for 64050 frames Cell Events: 1234 mean_circ: 0.92954
Ran for 64550 frames Cell Events: 1248 mean_circ: 0.929702
Ran for 65050 frames Cell Events: 1254 mean_circ: 0.929798
Ran for 65550 frames Cell Events: 1266 mean_circ: 0.929754
Ran for 66050 frames Cell Events: 1277 mean_circ: 0.929717
Ran for 66550 frames Cell Events: 1282 mean_circ: 0.929655
Ran for 67050 frames Cell Events: 1294 mean_circ: 0.929769
Ran for 67550 frames Cell Events: 1302 mean_circ: 0.92983
Ran for 68050 frames Cell Events: 1310 mean_circ: 0.929866
Ran for 69050 frames Cell Events: 1320 mean_circ: 0.929927
Ran for 69550 frames Cell Events: 1325 mean_circ: 0.93006
Ran for 70050 frames Cell Events: 1333 mean_circ: 0.929915
Ran for 70550 frames Cell Events: 1340 mean_circ: 0.930057
Ran for 71050 frames Cell Events: 1348 mean_circ: 0.930128
Ran for 71550 frames Cell Events: 1361 mean_circ: 0.930111
Ran for 72050 frames Cell Events: 1378 mean_circ: 0.930039
Ran for 72550 frames Cell Events: 1386 mean_circ: 0.930108
Ran for 73050 frames Cell Events: 1391 mean_circ: 0.930118
Ran for 73550 frames Cell Events: 1407 mean_circ: 0.929901
Ran for 74050 frames Cell Events: 1416 mean_circ: 0.929967
Ran for 74550 frames Cell Events: 1427 mean_circ: 0.930072
Ran for 75050 frames Cell Events: 1443 mean_circ: 0.930215
Ran for 75550 frames Cell Events: 1450 mean_circ: 0.930297
Ran for 76050 frames Cell Events: 1460 mean_circ: 0.930396
Ran for 76550 frames Cell Events: 1461 mean_circ: 0.930372
Ran for 77050 frames Cell Events: 1475 mean_circ: 0.930471
Ran for 77550 frames Cell Events: 1480 mean_circ: 0.930451
Ran for 78050 frames Cell Events: 1488 mean_circ: 0.930298
Ran for 78550 frames Cell Events: 1490 mean_circ: 0.930271
Ran for 79050 frames Cell Events: 1500 mean_circ: 0.930286
Ran for 79550 frames Cell Events: 1507 mean_circ: 0.930398
Ran for 80050 frames Cell Events: 1510 mean_circ: 0.930361
Ran for 80550 frames Cell Events: 1517 mean_circ: 0.930396
Ran for 81050 frames Cell Events: 1527 mean_circ: 0.93034
Ran for 81550 frames Cell Events: 1535 mean_circ: 0.930301
Ran for 82550 frames Cell Events: 1544 mean_circ: 0.930448
Ran for 83050 frames Cell Events: 1549 mean_circ: 0.930362
Ran for 83550 frames Cell Events: 1573 mean_circ: 0.930335
Ran for 84050 frames Cell Events: 1581 mean_circ: 0.930445
Ran for 84550 frames Cell Events: 1591 mean_circ: 0.93056
Ran for 85550 frames Cell Events: 1611 mean_circ: 0.930531
Ran for 86050 frames Cell Events: 1620 mean_circ: 0.930458
Ran for 86550 frames Cell Events: 1628 mean_circ: 0.930427
Ran for 87050 frames Cell Events: 1635 mean_circ: 0.930454
Ran for 87550 frames Cell Events: 1639 mean_circ: 0.930488
Ran for 88550 frames Cell Events: 1672 mean_circ: 0.929954
Ran for 89050 frames Cell Events: 1691 mean_circ: 0.930037
Ran for 89550 frames Cell Events: 1713 mean_circ: 0.930173
Ran for 90050 frames Cell Events: 1720 mean_circ: 0.930066
Ran for 90550 frames Cell Events: 1724 mean_circ: 0.930073
Ran for 91050 frames Cell Events: 1741 mean_circ: 0.93004
Ran for 91550 frames Cell Events: 1745 mean_circ: 0.929874
Ran for 92050 frames Cell Events: 1750 mean_circ: 0.929904
Ran for 92550 frames Cell Events: 1761 mean_circ: 0.929923
Ran for 93050 frames Cell Events: 1767 mean_circ: 0.929954
Ran for 93550 frames Cell Events: 1772 mean_circ: 0.929842
Ran for 94050 frames Cell Events: 1774 mean_circ: 0.929831
Ran for 94550 frames Cell Events: 1780 mean_circ: 0.929798
Ran for 95050 frames Cell Events: 1786 mean_circ: 0.929568
Ran for 95550 frames Cell Events: 1798 mean_circ: 0.929667
Ran for 96050 frames Cell Events: 1807 mean_circ: 0.929739
Ran for 96550 frames Cell Events: 1812 mean_circ: 0.929522
Ran for 97050 frames Cell Events: 1816 mean_circ: 0.929493
Ran for 97550 frames Cell Events: 1821 mean_circ: 0.929569
Ran for 98050 frames Cell Events: 1831 mean_circ: 0.929472
Ran for 98550 frames Cell Events: 1845 mean_circ: 0.929497
Ran for 99050 frames Cell Events: 1856 mean_circ: 0.929619
Ran for 99550 frames Cell Events: 1873 mean_circ: 0.929663
Ran for 100050 frames Cell Events: 1899 mean_circ: 0.929712
Ran for 100550 frames Cell Events: 1921 mean_circ: 0.929723
Ran for 101050 frames Cell Events: 1937 mean_circ: 0.92971
Ran for 101550 frames Cell Events: 1943 mean_circ: 0.929686
Ran for 102050 frames Cell Events: 1958 mean_circ: 0.9297
Ran for 102550 frames Cell Events: 1961 mean_circ: 0.929749
Ran for 103050 frames Cell Events: 1972 mean_circ: 0.929715
Ran for 103550 frames Cell Events: 1986 mean_circ: 0.929769
Ran for 104050 frames Cell Events: 1995 mean_circ: 0.929712
Ran for 104550 frames Cell Events: 2005 mean_circ: 0.929717
Ran for 105050 frames Cell Events: 2012 mean_circ: 0.929796
Ran for 105550 frames Cell Events: 2017 mean_circ: 0.929762
Ran for 106550 frames Cell Events: 2030 mean_circ: 0.92989
Ran for 107050 frames Cell Events: 2050 mean_circ: 0.930007
Ran for 107550 frames Cell Events: 2064 mean_circ: 0.929902
Ran for 108050 frames Cell Events: 2070 mean_circ: 0.929888
Ran for 108550 frames Cell Events: 2080 mean_circ: 0.929932
Ran for 109050 frames Cell Events: 2095 mean_circ: 0.929735
Ran for 109550 frames Cell Events: 2106 mean_circ: 0.929707
Ran for 110050 frames Cell Events: 2113 mean_circ: 0.929637
Ran for 110550 frames Cell Events: 2119 mean_circ: 0.929695
Ran for 111050 frames Cell Events: 2124 mean_circ: 0.929705
Ran for 111550 frames Cell Events: 2133 mean_circ: 0.929782
Ran for 112050 frames Cell Events: 2144 mean_circ: 0.929923
Ran for 112550 frames Cell Events: 2165 mean_circ: 0.930024
Ran for 113050 frames Cell Events: 2172 mean_circ: 0.930103
Ran for 113550 frames Cell Events: 2188 mean_circ: 0.930121
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Ran for 115550 frames Cell Events: 2214 mean_circ: 0.930191
Ran for 116050 frames Cell Events: 2228 mean_circ: 0.930371
Ran for 116550 frames Cell Events: 2229 mean_circ: 0.930389
Ran for 117050 frames Cell Events: 2234 mean_circ: 0.930437
Ran for 117550 frames Cell Events: 2246 mean_circ: 0.930453
Ran for 118050 frames Cell Events: 2264 mean_circ: 0.930559
Ran for 118550 frames Cell Events: 2280 mean_circ: 0.930478
Ran for 119050 frames Cell Events: 2288 mean_circ: 0.930427
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Ran for 120050 frames Cell Events: 2313 mean_circ: 0.93039
Ran for 120550 frames Cell Events: 2316 mean_circ: 0.930289
Ran for 121050 frames Cell Events: 2325 mean_circ: 0.930225
Ran for 121550 frames Cell Events: 2327 mean_circ: 0.930206
Ran for 122050 frames Cell Events: 2341 mean_circ: 0.93031
Ran for 122550 frames Cell Events: 2352 mean_circ: 0.930194
Ran for 123050 frames Cell Events: 2357 mean_circ: 0.930194
Ran for 123550 frames Cell Events: 2363 mean_circ: 0.930257
Ran for 124050 frames Cell Events: 2370 mean_circ: 0.930327
Ran for 124550 frames Cell Events: 2382 mean_circ: 0.93032
Ran for 125050 frames Cell Events: 2389 mean_circ: 0.930352
Ran for 125550 frames Cell Events: 2394 mean_circ: 0.930411
Ran for 126050 frames Cell Events: 2405 mean_circ: 0.930247
Ran for 127050 frames Cell Events: 2417 mean_circ: 0.930194
Ran for 127550 frames Cell Events: 2420 mean_circ: 0.930185
Ran for 128050 frames Cell Events: 2435 mean_circ: 0.930271
Ran for 128550 frames Cell Events: 2441 mean_circ: 0.93029
Ran for 129050 frames Cell Events: 2447 mean_circ: 0.930287
Ran for 129550 frames Cell Events: 2452 mean_circ: 0.930148
Ran for 130550 frames Cell Events: 2458 mean_circ: 0.930108
Ran for 131050 frames Cell Events: 2464 mean_circ: 0.93005
Ran for 131550 frames Cell Events: 2470 mean_circ: 0.930043
Ran for 132050 frames Cell Events: 2472 mean_circ: 0.930046
Ran for 132550 frames Cell Events: 2484 mean_circ: 0.929964
Ran for 133550 frames Cell Events: 2499 mean_circ: 0.930073
Ran for 134050 frames Cell Events: 2505 mean_circ: 0.930006
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Ran for 135550 frames Cell Events: 2520 mean_circ: 0.930024
Ran for 136050 frames Cell Events: 2528 mean_circ: 0.92992
Ran for 136550 frames Cell Events: 2536 mean_circ: 0.929824
Ran for 137050 frames Cell Events: 2544 mean_circ: 0.929857
Ran for 137550 frames Cell Events: 2557 mean_circ: 0.929874
Ran for 138050 frames Cell Events: 2565 mean_circ: 0.929828
Ran for 138550 frames Cell Events: 2575 mean_circ: 0.929815
Ran for 139050 frames Cell Events: 2585 mean_circ: 0.929812
Ran for 139550 frames Cell Events: 2600 mean_circ: 0.929844
Ran for 140050 frames Cell Events: 2614 mean_circ: 0.929887
Ran for 140550 frames Cell Events: 2628 mean_circ: 0.929919
Ran for 141050 frames Cell Events: 2632 mean_circ: 0.929966
Ran for 142050 frames Cell Events: 2643 mean_circ: 0.929974
Ran for 142550 frames Cell Events: 2649 mean_circ: 0.929972
Ran for 143050 frames Cell Events: 2660 mean_circ: 0.929938
Ran for 143550 frames Cell Events: 2664 mean_circ: 0.929966
Ran for 144050 frames Cell Events: 2668 mean_circ: 0.929995
Ran for 144550 frames Cell Events: 2673 mean_circ: 0.929997
Ran for 145050 frames Cell Events: 2682 mean_circ: 0.929983
Ran for 145550 frames Cell Events: 2693 mean_circ: 0.929883
Ran for 146050 frames Cell Events: 2695 mean_circ: 0.9299
Ran for 146550 frames Cell Events: 2709 mean_circ: 0.92983
Ran for 147050 frames Cell Events: 2720 mean_circ: 0.929886
Ran for 147550 frames Cell Events: 2727 mean_circ: 0.929892
Ran for 148550 frames Cell Events: 2735 mean_circ: 0.929911
Ran for 149050 frames Cell Events: 2739 mean_circ: 0.929908
Ran for 149550 frames Cell Events: 2753 mean_circ: 0.92993
Ran for 150550 frames Cell Events: 2777 mean_circ: 0.930087
Ran for 151550 frames Cell Events: 2800 mean_circ: 0.930049
Ran for 152050 frames Cell Events: 2805 mean_circ: 0.929989
Ran for 152550 frames Cell Events: 2810 mean_circ: 0.929994
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Ran for 382550 frames Cell Events: 6943 mean_circ: 0.930594
Ran for 383050 frames Cell Events: 6947 mean_circ: 0.930569
Ran for 384050 frames Cell Events: 6958 mean_circ: 0.930589
Ran for 384550 frames Cell Events: 6967 mean_circ: 0.930568
Ran for 385050 frames Cell Events: 6983 mean_circ: 0.930513
Ran for 385550 frames Cell Events: 6988 mean_circ: 0.930502
Ran for 386550 frames Cell Events: 7001 mean_circ: 0.930467
Ran for 387050 frames Cell Events: 7003 mean_circ: 0.930476
Ran for 387550 frames Cell Events: 7019 mean_circ: 0.930488
Ran for 388050 frames Cell Events: 7028 mean_circ: 0.930512
Ran for 388550 frames Cell Events: 7036 mean_circ: 0.930505
Ran for 389550 frames Cell Events: 7059 mean_circ: 0.930476
Ran for 390050 frames Cell Events: 7073 mean_circ: 0.930486
Ran for 390550 frames Cell Events: 7079 mean_circ: 0.930505
Ran for 391550 frames Cell Events: 7095 mean_circ: 0.930557
Ran for 392050 frames Cell Events: 7106 mean_circ: 0.930569
Ran for 393050 frames Cell Events: 7115 mean_circ: 0.930586
Ran for 393550 frames Cell Events: 7120 mean_circ: 0.930586
Ran for 394050 frames Cell Events: 7130 mean_circ: 0.930597
Ran for 394550 frames Cell Events: 7138 mean_circ: 0.93059
Ran for 395050 frames Cell Events: 7148 mean_circ: 0.930604
Ran for 396050 frames Cell Events: 7168 mean_circ: 0.930606
Ran for 396550 frames Cell Events: 7183 mean_circ: 0.930639
Ran for 397050 frames Cell Events: 7192 mean_circ: 0.930627
Ran for 397550 frames Cell Events: 7202 mean_circ: 0.930622
Ran for 398050 frames Cell Events: 7209 mean_circ: 0.930623
Ran for 398550 frames Cell Events: 7219 mean_circ: 0.930647
Ran for 399050 frames Cell Events: 7226 mean_circ: 0.930633
Ran for 400050 frames Cell Events: 7249 mean_circ: 0.930602
Ran for 400550 frames Cell Events: 7258 mean_circ: 0.930611
Ran for 401050 frames Cell Events: 7268 mean_circ: 0.930624
Ran for 401550 frames Cell Events: 7273 mean_circ: 0.93065
Ran for 402050 frames Cell Events: 7281 mean_circ: 0.930673
Ran for 402550 frames Cell Events: 7286 mean_circ: 0.930676
Ran for 403050 frames Cell Events: 7297 mean_circ: 0.930685
Ran for 403550 frames Cell Events: 7308 mean_circ: 0.930681
Ran for 404050 frames Cell Events: 7312 mean_circ: 0.930678
Ran for 405050 frames Cell Events: 7323 mean_circ: 0.930658
Ran for 405550 frames Cell Events: 7326 mean_circ: 0.930663
Ran for 406050 frames Cell Events: 7336 mean_circ: 0.930642
Ran for 406550 frames Cell Events: 7345 mean_circ: 0.930559
Ran for 408550 frames Cell Events: 7387 mean_circ: 0.930534
Ran for 409550 frames Cell Events: 7413 mean_circ: 0.930476
Ran for 410050 frames Cell Events: 7423 mean_circ: 0.930474
Ran for 410550 frames Cell Events: 7429 mean_circ: 0.930488
Ran for 411050 frames Cell Events: 7443 mean_circ: 0.930473
Ran for 412050 frames Cell Events: 7459 mean_circ: 0.930413
Ran for 413050 frames Cell Events: 7493 mean_circ: 0.930419
Ran for 413550 frames Cell Events: 7498 mean_circ: 0.930385
Ran for 414050 frames Cell Events: 7507 mean_circ: 0.930392
Ran for 414550 frames Cell Events: 7534 mean_circ: 0.930327
Ran for 415550 frames Cell Events: 7562 mean_circ: 0.930309
Ran for 416050 frames Cell Events: 7589 mean_circ: 0.93022
Ran for 416550 frames Cell Events: 7597 mean_circ: 0.930233
Ran for 417050 frames Cell Events: 7604 mean_circ: 0.930259
Ran for 417550 frames Cell Events: 7612 mean_circ: 0.930241
Ran for 419050 frames Cell Events: 7640 mean_circ: 0.93024
Ran for 419550 frames Cell Events: 7645 mean_circ: 0.930263
Ran for 420050 frames Cell Events: 7653 mean_circ: 0.930234
Ran for 420550 frames Cell Events: 7662 mean_circ: 0.930226
Ran for 421050 frames Cell Events: 7675 mean_circ: 0.93022
Ran for 421550 frames Cell Events: 7682 mean_circ: 0.930198
Ran for 422050 frames Cell Events: 7693 mean_circ: 0.930202
Ran for 422550 frames Cell Events: 7705 mean_circ: 0.930226
Ran for 423550 frames Cell Events: 7738 mean_circ: 0.930207
Ran for 424050 frames Cell Events: 7741 mean_circ: 0.930214
Ran for 424550 frames Cell Events: 7746 mean_circ: 0.930229
Ran for 425050 frames Cell Events: 7753 mean_circ: 0.93024
Ran for 425550 frames Cell Events: 7758 mean_circ: 0.930224
Ran for 426050 frames Cell Events: 7768 mean_circ: 0.930213
Ran for 426550 frames Cell Events: 7778 mean_circ: 0.930248
Ran for 427050 frames Cell Events: 7787 mean_circ: 0.930248
Ran for 427550 frames Cell Events: 7798 mean_circ: 0.930265
Ran for 428050 frames Cell Events: 7809 mean_circ: 0.930274
Ran for 428550 frames Cell Events: 7823 mean_circ: 0.930296
Ran for 429050 frames Cell Events: 7834 mean_circ: 0.930307
Ran for 429550 frames Cell Events: 7841 mean_circ: 0.93028
Ran for 431050 frames Cell Events: 7871 mean_circ: 0.930287
Ran for 431550 frames Cell Events: 7885 mean_circ: 0.930268
Ran for 432050 frames Cell Events: 7890 mean_circ: 0.930265
Ran for 432550 frames Cell Events: 7898 mean_circ: 0.930259
Ran for 433050 frames Cell Events: 7907 mean_circ: 0.930266
Ran for 434050 frames Cell Events: 7935 mean_circ: 0.93026
Ran for 434550 frames Cell Events: 7943 mean_circ: 0.930277
Ran for 435050 frames Cell Events: 7955 mean_circ: 0.93027
Ran for 435550 frames Cell Events: 7960 mean_circ: 0.93026
Ran for 436050 frames Cell Events: 7966 mean_circ: 0.930226
Ran for 436550 frames Cell Events: 7971 mean_circ: 0.930221
Ran for 437050 frames Cell Events: 7976 mean_circ: 0.930217
Ran for 437550 frames Cell Events: 7985 mean_circ: 0.930175
Ran for 438050 frames Cell Events: 7989 mean_circ: 0.930188
Ran for 438550 frames Cell Events: 7999 mean_circ: 0.930121
Ran for 439550 frames Cell Events: 8019 mean_circ: 0.930087
Ran for 441050 frames Cell Events: 8045 mean_circ: 0.93004
Ran for 441550 frames Cell Events: 8056 mean_circ: 0.930029
Ran for 442550 frames Cell Events: 8074 mean_circ: 0.92998
Ran for 443050 frames Cell Events: 8087 mean_circ: 0.929949
Ran for 443550 frames Cell Events: 8104 mean_circ: 0.929966
Ran for 444050 frames Cell Events: 8109 mean_circ: 0.929955
Ran for 444550 frames Cell Events: 8113 mean_circ: 0.929946
Ran for 445050 frames Cell Events: 8121 mean_circ: 0.929886
Ran for 445550 frames Cell Events: 8127 mean_circ: 0.9299
Ran for 446050 frames Cell Events: 8133 mean_circ: 0.92991
Ran for 446550 frames Cell Events: 8137 mean_circ: 0.92989
Ran for 447050 frames Cell Events: 8143 mean_circ: 0.929877
Ran for 447550 frames Cell Events: 8149 mean_circ: 0.929876
Ran for 448050 frames Cell Events: 8157 mean_circ: 0.929866
Ran for 448550 frames Cell Events: 8158 mean_circ: 0.929874
Ran for 449050 frames Cell Events: 8163 mean_circ: 0.929883
Ran for 449550 frames Cell Events: 8169 mean_circ: 0.929873
Ran for 450050 frames Cell Events: 8172 mean_circ: 0.92988
Ran for 450550 frames Cell Events: 8174 mean_circ: 0.929868
Ran for 452050 frames Cell Events: 8213 mean_circ: 0.929848
Ran for 452550 frames Cell Events: 8222 mean_circ: 0.929846
Ran for 453050 frames Cell Events: 8233 mean_circ: 0.929867
Ran for 453550 frames Cell Events: 8238 mean_circ: 0.929881
Ran for 454050 frames Cell Events: 8248 mean_circ: 0.929877
Ran for 454550 frames Cell Events: 8252 mean_circ: 0.929907
Ran for 455050 frames Cell Events: 8258 mean_circ: 0.929913
Ran for 455550 frames Cell Events: 8268 mean_circ: 0.929924
Ran for 456050 frames Cell Events: 8274 mean_circ: 0.929934
Ran for 456550 frames Cell Events: 8280 mean_circ: 0.929919
Ran for 457050 frames Cell Events: 8285 mean_circ: 0.929918
Ran for 457550 frames Cell Events: 8293 mean_circ: 0.929938
Ran for 458050 frames Cell Events: 8307 mean_circ: 0.929942
Ran for 458550 frames Cell Events: 8314 mean_circ: 0.92993
Ran for 459050 frames Cell Events: 8321 mean_circ: 0.929944
Ran for 459550 frames Cell Events: 8328 mean_circ: 0.929937
Ran for 460050 frames Cell Events: 8334 mean_circ: 0.929944
Ran for 461050 frames Cell Events: 8359 mean_circ: 0.929959
Ran for 461550 frames Cell Events: 8368 mean_circ: 0.929968
Ran for 462050 frames Cell Events: 8377 mean_circ: 0.929983
Ran for 462550 frames Cell Events: 8382 mean_circ: 0.929988
Ran for 463550 frames Cell Events: 8392 mean_circ: 0.929957
Ran for 464050 frames Cell Events: 8406 mean_circ: 0.929966
Ran for 465550 frames Cell Events: 8433 mean_circ: 0.930016
Ran for 466050 frames Cell Events: 8439 mean_circ: 0.93002
Ran for 466550 frames Cell Events: 8443 mean_circ: 0.929952
Ran for 467050 frames Cell Events: 8449 mean_circ: 0.929971
Ran for 467550 frames Cell Events: 8456 mean_circ: 0.92998
Ran for 468550 frames Cell Events: 8474 mean_circ: 0.930013
Ran for 469050 frames Cell Events: 8486 mean_circ: 0.929998
Ran for 469550 frames Cell Events: 8495 mean_circ: 0.930004
Ran for 470550 frames Cell Events: 8519 mean_circ: 0.929945
Ran for 471050 frames Cell Events: 8524 mean_circ: 0.929955
Ran for 471550 frames Cell Events: 8534 mean_circ: 0.929958
Ran for 473550 frames Cell Events: 8570 mean_circ: 0.929956
Ran for 474050 frames Cell Events: 8577 mean_circ: 0.929963
Ran for 474550 frames Cell Events: 8588 mean_circ: 0.929948
Ran for 475050 frames Cell Events: 8593 mean_circ: 0.929952
Ran for 475550 frames Cell Events: 8600 mean_circ: 0.929941
Ran for 476050 frames Cell Events: 8609 mean_circ: 0.929967
Ran for 476550 frames Cell Events: 8614 mean_circ: 0.92995
Ran for 477050 frames Cell Events: 8620 mean_circ: 0.929917
Ran for 478050 frames Cell Events: 8647 mean_circ: 0.929886
Ran for 479050 frames Cell Events: 8673 mean_circ: 0.929817
Ran for 480050 frames Cell Events: 8681 mean_circ: 0.929819
Ran for 480550 frames Cell Events: 8690 mean_circ: 0.929798
Ran for 481050 frames Cell Events: 8699 mean_circ: 0.929776
Ran for 481550 frames Cell Events: 8708 mean_circ: 0.929801



End this measurment..



Stopping time: 5.51266e+008
****************************************
Measurement finished

Mean Circularitiy: 0.929868
Mean Area: 686.006
Mean FL-1 intensity: 2850.92
Mean FL-2 intensity: 3675.18
Mean FL-3 intensity: 0

frames processed: 479449
Total Time: 241572ms
Number of Runs (new bg img) 0
Frames collected: 482992
Skipped frames: 54462
Rescued Frames: 2567821
Samples DAQ: 120747997
Samples written: 241495780
Samples per Channel: 120747890
FPS: 1999.37

Samples per second: 499842
Expected samples/s: 500000

Events: 8740
Events per second: 36.1797
jumped back (PMT): 7127
#Frames read, frequency
# 0 frames :620130
# 1 frames :320329
# 2 frames :7762
# 3 frames :2688
# 4 frames :1771
# 5 frames :769
# 6 frames :1530
# 7 frames :3166
# 8 frames :1918
# 9 frames :1217
# 10 frames :733
# 11 frames :691
# 12 frames :624
# 13 frames :563
# 14 frames :440
# 15 frames :312
# 16 frames :259
# 17 frames :187
# 18 frames :156
# 19 frames :133
# 20 frames :115
# 21 frames :82
# 22 frames :67
# 23 frames :50
# 24 frames :41
# 25 frames :26
# 26 frames :28
# 27 frames :29
# 28 frames :19
# 29 frames :15
# 30 frames :17
# 31 frames :11
# 32 frames :8
# 33 frames :9
# 34 frames :6
# 35 frames :4
# 36 frames :6
# 37 frames :3
# 38 frames :3
# 39 frames :1
# 40 frames :4
# 41 frames :1
# 42 frames :2
# 43 frames :1
# 44 frames :2
# 45 frames :3
# 46 frames :1
# 47 frames :1
# 48 frames :1
# 50 frames :1
# 51 frames :1
# 52 frames :1
# 55 frames :1
# 56 frames :1
# 61 frames :1
# 65 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.0543
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0