Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_12.29.10 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "f765e183f56cb7b4e12673a633fc9a30",
"name": "M1_20170603_2022_dsRNA_D3_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "10:29:34"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10000 (max 10001) in
'10000'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.1083
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.68479e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 1 mean_circ: 0.933568
Ran for 550 frames Cell Events: 15 mean_circ: 0.956198
Ran for 2050 frames Cell Events: 71 mean_circ: 0.948574
Ran for 2550 frames Cell Events: 84 mean_circ: 0.951786
Ran for 3050 frames Cell Events: 105 mean_circ: 0.95027
Ran for 3550 frames Cell Events: 117 mean_circ: 0.950553
Ran for 4550 frames Cell Events: 173 mean_circ: 0.947613
Ran for 5050 frames Cell Events: 181 mean_circ: 0.947936
Ran for 5550 frames Cell Events: 198 mean_circ: 0.94762
Ran for 6050 frames Cell Events: 214 mean_circ: 0.947809
Ran for 6550 frames Cell Events: 224 mean_circ: 0.948213
Ran for 7050 frames Cell Events: 233 mean_circ: 0.948195
Ran for 8550 frames Cell Events: 283 mean_circ: 0.949195
Ran for 9050 frames Cell Events: 302 mean_circ: 0.94887
Ran for 9550 frames Cell Events: 321 mean_circ: 0.948895
Ran for 10050 frames Cell Events: 346 mean_circ: 0.949505
Ran for 10550 frames Cell Events: 362 mean_circ: 0.948999
Ran for 11050 frames Cell Events: 367 mean_circ: 0.948689
Ran for 11550 frames Cell Events: 379 mean_circ: 0.94901
Ran for 12050 frames Cell Events: 396 mean_circ: 0.949138
Ran for 13050 frames Cell Events: 425 mean_circ: 0.948441
Ran for 14050 frames Cell Events: 456 mean_circ: 0.949039
Ran for 14550 frames Cell Events: 472 mean_circ: 0.948633
Ran for 15050 frames Cell Events: 487 mean_circ: 0.948778
Ran for 15550 frames Cell Events: 502 mean_circ: 0.94875
Ran for 16050 frames Cell Events: 515 mean_circ: 0.948548
Ran for 16550 frames Cell Events: 536 mean_circ: 0.948274
Ran for 17050 frames Cell Events: 554 mean_circ: 0.947983
Ran for 17550 frames Cell Events: 564 mean_circ: 0.948104
Ran for 18050 frames Cell Events: 585 mean_circ: 0.948036
Ran for 18550 frames Cell Events: 604 mean_circ: 0.947302
Ran for 19050 frames Cell Events: 630 mean_circ: 0.946933
Ran for 19550 frames Cell Events: 643 mean_circ: 0.946796
Ran for 20050 frames Cell Events: 658 mean_circ: 0.947018
Ran for 20550 frames Cell Events: 679 mean_circ: 0.947239
Ran for 22050 frames Cell Events: 729 mean_circ: 0.946748
Ran for 23050 frames Cell Events: 750 mean_circ: 0.946742
Ran for 23550 frames Cell Events: 765 mean_circ: 0.946764
Ran for 24050 frames Cell Events: 783 mean_circ: 0.946728
Ran for 25550 frames Cell Events: 833 mean_circ: 0.947118
Ran for 26050 frames Cell Events: 849 mean_circ: 0.946717
Ran for 26550 frames Cell Events: 869 mean_circ: 0.946761
Ran for 27050 frames Cell Events: 896 mean_circ: 0.946638
Ran for 28550 frames Cell Events: 933 mean_circ: 0.946358
Ran for 29050 frames Cell Events: 951 mean_circ: 0.94629
Ran for 29550 frames Cell Events: 968 mean_circ: 0.946084
Ran for 30550 frames Cell Events: 996 mean_circ: 0.946171
Ran for 31050 frames Cell Events: 1010 mean_circ: 0.945943
Ran for 31550 frames Cell Events: 1025 mean_circ: 0.945937
Ran for 32050 frames Cell Events: 1038 mean_circ: 0.945952
Ran for 32550 frames Cell Events: 1051 mean_circ: 0.94601
Ran for 33050 frames Cell Events: 1064 mean_circ: 0.94601
Ran for 33550 frames Cell Events: 1082 mean_circ: 0.946161
Ran for 34550 frames Cell Events: 1113 mean_circ: 0.946078
Ran for 35550 frames Cell Events: 1147 mean_circ: 0.94646
Ran for 36550 frames Cell Events: 1183 mean_circ: 0.946291
Ran for 37550 frames Cell Events: 1206 mean_circ: 0.946438
Ran for 38050 frames Cell Events: 1220 mean_circ: 0.946407
Ran for 38550 frames Cell Events: 1235 mean_circ: 0.946247
Ran for 39050 frames Cell Events: 1263 mean_circ: 0.946001
Ran for 40050 frames Cell Events: 1296 mean_circ: 0.945874
Ran for 40550 frames Cell Events: 1303 mean_circ: 0.945903
Ran for 41050 frames Cell Events: 1317 mean_circ: 0.945877
Ran for 42050 frames Cell Events: 1346 mean_circ: 0.945922
Ran for 42550 frames Cell Events: 1350 mean_circ: 0.945938
Ran for 43050 frames Cell Events: 1366 mean_circ: 0.946042
Ran for 43550 frames Cell Events: 1374 mean_circ: 0.94607
Ran for 44550 frames Cell Events: 1398 mean_circ: 0.946094
Ran for 45550 frames Cell Events: 1423 mean_circ: 0.94602
Ran for 46550 frames Cell Events: 1457 mean_circ: 0.945991
Ran for 47050 frames Cell Events: 1466 mean_circ: 0.945698
Ran for 48050 frames Cell Events: 1497 mean_circ: 0.945913
Ran for 48550 frames Cell Events: 1507 mean_circ: 0.945933
Ran for 49050 frames Cell Events: 1522 mean_circ: 0.945882
Ran for 49550 frames Cell Events: 1538 mean_circ: 0.945943
Ran for 50550 frames Cell Events: 1568 mean_circ: 0.946025
Ran for 51050 frames Cell Events: 1597 mean_circ: 0.945976
Ran for 51550 frames Cell Events: 1613 mean_circ: 0.94602
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Ran for 53050 frames Cell Events: 1678 mean_circ: 0.946148
Ran for 53550 frames Cell Events: 1691 mean_circ: 0.945967
Ran for 54050 frames Cell Events: 1702 mean_circ: 0.945991
Ran for 54550 frames Cell Events: 1719 mean_circ: 0.946036
Ran for 56050 frames Cell Events: 1774 mean_circ: 0.946296
Ran for 56550 frames Cell Events: 1795 mean_circ: 0.946269
Ran for 57050 frames Cell Events: 1812 mean_circ: 0.946272
Ran for 57550 frames Cell Events: 1822 mean_circ: 0.94628
Ran for 58050 frames Cell Events: 1835 mean_circ: 0.946353
Ran for 59050 frames Cell Events: 1873 mean_circ: 0.946373
Ran for 59550 frames Cell Events: 1887 mean_circ: 0.946374
Ran for 60050 frames Cell Events: 1904 mean_circ: 0.946393
Ran for 62050 frames Cell Events: 1979 mean_circ: 0.94654
Ran for 62550 frames Cell Events: 1992 mean_circ: 0.946569
Ran for 63050 frames Cell Events: 2001 mean_circ: 0.946544
Ran for 63550 frames Cell Events: 2015 mean_circ: 0.946529
Ran for 65050 frames Cell Events: 2051 mean_circ: 0.946444
Ran for 65550 frames Cell Events: 2074 mean_circ: 0.946401
Ran for 66050 frames Cell Events: 2093 mean_circ: 0.94634
Ran for 67050 frames Cell Events: 2138 mean_circ: 0.946298
Ran for 67550 frames Cell Events: 2144 mean_circ: 0.946316
Ran for 68050 frames Cell Events: 2164 mean_circ: 0.946207
Ran for 69050 frames Cell Events: 2202 mean_circ: 0.946243
Ran for 69550 frames Cell Events: 2217 mean_circ: 0.9462
Ran for 70050 frames Cell Events: 2229 mean_circ: 0.946196
Ran for 70550 frames Cell Events: 2254 mean_circ: 0.946068
Ran for 71550 frames Cell Events: 2279 mean_circ: 0.946136
Ran for 72050 frames Cell Events: 2288 mean_circ: 0.946172
Ran for 72550 frames Cell Events: 2299 mean_circ: 0.946088
Ran for 73050 frames Cell Events: 2311 mean_circ: 0.946025
Ran for 73550 frames Cell Events: 2322 mean_circ: 0.946101
Ran for 74050 frames Cell Events: 2335 mean_circ: 0.946115
Ran for 74550 frames Cell Events: 2347 mean_circ: 0.94618
Ran for 75550 frames Cell Events: 2380 mean_circ: 0.946177
Ran for 76050 frames Cell Events: 2395 mean_circ: 0.946222
Ran for 77050 frames Cell Events: 2438 mean_circ: 0.946102
Ran for 77550 frames Cell Events: 2452 mean_circ: 0.946145
Ran for 78050 frames Cell Events: 2467 mean_circ: 0.946197
Ran for 79550 frames Cell Events: 2507 mean_circ: 0.946228
Ran for 80050 frames Cell Events: 2520 mean_circ: 0.946171
Ran for 80550 frames Cell Events: 2538 mean_circ: 0.946165
Ran for 81050 frames Cell Events: 2555 mean_circ: 0.946088
Ran for 81550 frames Cell Events: 2573 mean_circ: 0.945909
Ran for 82050 frames Cell Events: 2595 mean_circ: 0.945815
Ran for 82550 frames Cell Events: 2616 mean_circ: 0.945873
Ran for 83050 frames Cell Events: 2633 mean_circ: 0.94591
Ran for 84050 frames Cell Events: 2668 mean_circ: 0.945844
Ran for 86050 frames Cell Events: 2747 mean_circ: 0.94573
Ran for 86550 frames Cell Events: 2767 mean_circ: 0.945802
Ran for 87050 frames Cell Events: 2786 mean_circ: 0.945817
Ran for 87550 frames Cell Events: 2807 mean_circ: 0.945877
Ran for 88050 frames Cell Events: 2828 mean_circ: 0.945974
Ran for 88550 frames Cell Events: 2838 mean_circ: 0.945894
Ran for 89050 frames Cell Events: 2861 mean_circ: 0.94591
Ran for 90050 frames Cell Events: 2893 mean_circ: 0.945913
Ran for 90550 frames Cell Events: 2906 mean_circ: 0.945955
Ran for 91050 frames Cell Events: 2920 mean_circ: 0.945964
Ran for 91550 frames Cell Events: 2938 mean_circ: 0.945989
Ran for 92050 frames Cell Events: 2945 mean_circ: 0.946008
Ran for 92550 frames Cell Events: 2960 mean_circ: 0.945939
Ran for 93550 frames Cell Events: 2998 mean_circ: 0.945964
Ran for 94050 frames Cell Events: 3015 mean_circ: 0.945958
Ran for 94550 frames Cell Events: 3029 mean_circ: 0.945963
Ran for 95050 frames Cell Events: 3046 mean_circ: 0.945993
Ran for 96550 frames Cell Events: 3100 mean_circ: 0.946066
Ran for 97050 frames Cell Events: 3116 mean_circ: 0.946091
Ran for 97550 frames Cell Events: 3133 mean_circ: 0.94613
Ran for 98050 frames Cell Events: 3153 mean_circ: 0.946122
Ran for 98550 frames Cell Events: 3167 mean_circ: 0.94618
Ran for 99050 frames Cell Events: 3185 mean_circ: 0.946145
Ran for 100050 frames Cell Events: 3221 mean_circ: 0.946166
Ran for 100550 frames Cell Events: 3244 mean_circ: 0.94609
Ran for 101050 frames Cell Events: 3265 mean_circ: 0.946052
Ran for 101550 frames Cell Events: 3274 mean_circ: 0.946064
Ran for 102050 frames Cell Events: 3289 mean_circ: 0.946049
Ran for 102550 frames Cell Events: 3303 mean_circ: 0.946035
Ran for 103550 frames Cell Events: 3338 mean_circ: 0.945986
Ran for 104550 frames Cell Events: 3376 mean_circ: 0.946103
Ran for 105050 frames Cell Events: 3396 mean_circ: 0.946072
Ran for 106050 frames Cell Events: 3444 mean_circ: 0.946037
Ran for 106550 frames Cell Events: 3475 mean_circ: 0.94606
Ran for 107050 frames Cell Events: 3497 mean_circ: 0.946062
Ran for 108050 frames Cell Events: 3535 mean_circ: 0.945907
Ran for 108550 frames Cell Events: 3551 mean_circ: 0.945937
Ran for 109050 frames Cell Events: 3568 mean_circ: 0.945979
Ran for 109550 frames Cell Events: 3589 mean_circ: 0.946027
Ran for 110050 frames Cell Events: 3616 mean_circ: 0.945955
Ran for 110550 frames Cell Events: 3639 mean_circ: 0.946012
Ran for 111050 frames Cell Events: 3661 mean_circ: 0.946007
Ran for 112050 frames Cell Events: 3698 mean_circ: 0.945975
Ran for 112550 frames Cell Events: 3716 mean_circ: 0.945991
Ran for 113050 frames Cell Events: 3729 mean_circ: 0.945977
Ran for 113550 frames Cell Events: 3752 mean_circ: 0.946038
Ran for 114050 frames Cell Events: 3774 mean_circ: 0.946004
Ran for 114550 frames Cell Events: 3795 mean_circ: 0.945958
Ran for 115050 frames Cell Events: 3811 mean_circ: 0.94599
Ran for 115550 frames Cell Events: 3835 mean_circ: 0.945944
Ran for 116550 frames Cell Events: 3863 mean_circ: 0.945917
Ran for 117550 frames Cell Events: 3903 mean_circ: 0.945911
Ran for 118050 frames Cell Events: 3923 mean_circ: 0.945898
Ran for 118550 frames Cell Events: 3940 mean_circ: 0.945852
Ran for 119550 frames Cell Events: 3990 mean_circ: 0.945825
Ran for 121550 frames Cell Events: 4063 mean_circ: 0.945861
Ran for 122550 frames Cell Events: 4098 mean_circ: 0.945893
Ran for 123050 frames Cell Events: 4115 mean_circ: 0.945842
Ran for 124050 frames Cell Events: 4146 mean_circ: 0.945819
Ran for 124550 frames Cell Events: 4165 mean_circ: 0.945856
Ran for 125050 frames Cell Events: 4185 mean_circ: 0.945836
Ran for 125550 frames Cell Events: 4207 mean_circ: 0.945858
Ran for 127050 frames Cell Events: 4275 mean_circ: 0.945857
Ran for 128050 frames Cell Events: 4302 mean_circ: 0.945804
Ran for 128550 frames Cell Events: 4317 mean_circ: 0.945757
Ran for 129050 frames Cell Events: 4339 mean_circ: 0.945764
Ran for 129550 frames Cell Events: 4364 mean_circ: 0.945728
Ran for 130550 frames Cell Events: 4405 mean_circ: 0.945658
Ran for 131550 frames Cell Events: 4443 mean_circ: 0.945644
Ran for 132050 frames Cell Events: 4463 mean_circ: 0.9457
Ran for 133550 frames Cell Events: 4524 mean_circ: 0.945746
Ran for 134050 frames Cell Events: 4544 mean_circ: 0.945767
Ran for 134550 frames Cell Events: 4570 mean_circ: 0.945769
Ran for 135050 frames Cell Events: 4587 mean_circ: 0.945805
Ran for 135550 frames Cell Events: 4607 mean_circ: 0.94578
Ran for 136050 frames Cell Events: 4629 mean_circ: 0.945836
Ran for 137050 frames Cell Events: 4669 mean_circ: 0.945809
Ran for 139550 frames Cell Events: 4761 mean_circ: 0.945761
Ran for 140050 frames Cell Events: 4776 mean_circ: 0.945787
Ran for 140550 frames Cell Events: 4791 mean_circ: 0.945815
Ran for 141050 frames Cell Events: 4803 mean_circ: 0.945805
Ran for 141550 frames Cell Events: 4825 mean_circ: 0.945735
Ran for 142050 frames Cell Events: 4843 mean_circ: 0.945766
Ran for 143550 frames Cell Events: 4910 mean_circ: 0.945758
Ran for 144050 frames Cell Events: 4933 mean_circ: 0.945775
Ran for 144550 frames Cell Events: 4951 mean_circ: 0.945733
Ran for 145050 frames Cell Events: 4972 mean_circ: 0.945756
Ran for 146550 frames Cell Events: 5032 mean_circ: 0.945704
Ran for 147050 frames Cell Events: 5046 mean_circ: 0.945699
Ran for 148050 frames Cell Events: 5089 mean_circ: 0.945692
Ran for 148550 frames Cell Events: 5107 mean_circ: 0.94565
Ran for 149050 frames Cell Events: 5132 mean_circ: 0.945621
Ran for 149550 frames Cell Events: 5155 mean_circ: 0.94564
Ran for 150050 frames Cell Events: 5165 mean_circ: 0.945635
Ran for 150550 frames Cell Events: 5188 mean_circ: 0.945673
Ran for 152550 frames Cell Events: 5282 mean_circ: 0.945665
Ran for 153050 frames Cell Events: 5298 mean_circ: 0.945648
Ran for 153550 frames Cell Events: 5313 mean_circ: 0.945626
Ran for 154050 frames Cell Events: 5335 mean_circ: 0.945615
Ran for 155550 frames Cell Events: 5396 mean_circ: 0.945615
Ran for 156050 frames Cell Events: 5411 mean_circ: 0.945575
Ran for 157050 frames Cell Events: 5436 mean_circ: 0.945553
Ran for 157550 frames Cell Events: 5452 mean_circ: 0.945574
Ran for 158550 frames Cell Events: 5488 mean_circ: 0.945568
Ran for 160050 frames Cell Events: 5564 mean_circ: 0.945585
Ran for 161550 frames Cell Events: 5625 mean_circ: 0.945577
Ran for 162050 frames Cell Events: 5651 mean_circ: 0.945545
Ran for 162550 frames Cell Events: 5680 mean_circ: 0.945482
Ran for 163550 frames Cell Events: 5723 mean_circ: 0.945471
Ran for 164050 frames Cell Events: 5743 mean_circ: 0.945473
Ran for 164550 frames Cell Events: 5758 mean_circ: 0.945477
Ran for 165550 frames Cell Events: 5792 mean_circ: 0.945499
Ran for 166050 frames Cell Events: 5811 mean_circ: 0.945484
Ran for 167050 frames Cell Events: 5831 mean_circ: 0.94548
Ran for 167550 frames Cell Events: 5848 mean_circ: 0.945489
Ran for 168050 frames Cell Events: 5861 mean_circ: 0.945497
Ran for 168550 frames Cell Events: 5892 mean_circ: 0.945515
Ran for 169050 frames Cell Events: 5901 mean_circ: 0.945528
Ran for 170550 frames Cell Events: 5947 mean_circ: 0.945497
Ran for 171550 frames Cell Events: 5987 mean_circ: 0.945557
Ran for 172050 frames Cell Events: 6001 mean_circ: 0.945551
Ran for 173050 frames Cell Events: 6038 mean_circ: 0.945558
Ran for 173550 frames Cell Events: 6057 mean_circ: 0.94555
Ran for 174050 frames Cell Events: 6073 mean_circ: 0.94557
Ran for 175550 frames Cell Events: 6133 mean_circ: 0.945446
Ran for 176050 frames Cell Events: 6158 mean_circ: 0.945473
Ran for 176550 frames Cell Events: 6171 mean_circ: 0.945422
Ran for 177050 frames Cell Events: 6197 mean_circ: 0.945447
Ran for 178050 frames Cell Events: 6238 mean_circ: 0.945413
Ran for 179050 frames Cell Events: 6272 mean_circ: 0.945405
Ran for 179550 frames Cell Events: 6294 mean_circ: 0.945429
Ran for 181050 frames Cell Events: 6360 mean_circ: 0.945413
Ran for 181550 frames Cell Events: 6377 mean_circ: 0.945413
Ran for 182550 frames Cell Events: 6422 mean_circ: 0.945463
Ran for 183050 frames Cell Events: 6450 mean_circ: 0.945426
Ran for 184550 frames Cell Events: 6511 mean_circ: 0.945466
Ran for 185550 frames Cell Events: 6545 mean_circ: 0.945378
Ran for 186050 frames Cell Events: 6556 mean_circ: 0.945315
Ran for 186550 frames Cell Events: 6583 mean_circ: 0.945303
Ran for 187050 frames Cell Events: 6597 mean_circ: 0.945301
Ran for 187550 frames Cell Events: 6616 mean_circ: 0.945314
Ran for 188550 frames Cell Events: 6668 mean_circ: 0.945358
Ran for 189050 frames Cell Events: 6693 mean_circ: 0.945338
Ran for 189550 frames Cell Events: 6711 mean_circ: 0.945331
Ran for 191050 frames Cell Events: 6783 mean_circ: 0.945327
Ran for 192050 frames Cell Events: 6837 mean_circ: 0.945342
Ran for 192550 frames Cell Events: 6870 mean_circ: 0.945221
Ran for 193050 frames Cell Events: 6899 mean_circ: 0.94525
Ran for 194050 frames Cell Events: 6937 mean_circ: 0.945261
Ran for 194550 frames Cell Events: 6959 mean_circ: 0.945228
Ran for 195050 frames Cell Events: 6989 mean_circ: 0.945232
Ran for 196050 frames Cell Events: 7032 mean_circ: 0.945263
Ran for 196550 frames Cell Events: 7047 mean_circ: 0.945273
Ran for 197050 frames Cell Events: 7062 mean_circ: 0.945289
Ran for 197550 frames Cell Events: 7083 mean_circ: 0.945317
Ran for 199050 frames Cell Events: 7148 mean_circ: 0.945302
Ran for 199550 frames Cell Events: 7171 mean_circ: 0.945282
Ran for 200050 frames Cell Events: 7191 mean_circ: 0.945287
Ran for 200550 frames Cell Events: 7212 mean_circ: 0.945298
Ran for 201550 frames Cell Events: 7241 mean_circ: 0.945267
Ran for 202050 frames Cell Events: 7254 mean_circ: 0.945275
Ran for 202550 frames Cell Events: 7273 mean_circ: 0.94523
Ran for 203050 frames Cell Events: 7297 mean_circ: 0.945237
Ran for 205050 frames Cell Events: 7401 mean_circ: 0.945235
Ran for 205550 frames Cell Events: 7425 mean_circ: 0.94525
Ran for 206050 frames Cell Events: 7444 mean_circ: 0.945224
Ran for 207050 frames Cell Events: 7484 mean_circ: 0.945193
Ran for 207550 frames Cell Events: 7507 mean_circ: 0.945182
Ran for 208050 frames Cell Events: 7518 mean_circ: 0.945193
Ran for 208550 frames Cell Events: 7537 mean_circ: 0.945191
Ran for 209550 frames Cell Events: 7575 mean_circ: 0.945182
Ran for 211050 frames Cell Events: 7625 mean_circ: 0.945187
Ran for 211550 frames Cell Events: 7646 mean_circ: 0.945177
Ran for 212550 frames Cell Events: 7682 mean_circ: 0.945134
Ran for 213550 frames Cell Events: 7725 mean_circ: 0.945179
Ran for 215050 frames Cell Events: 7799 mean_circ: 0.945167
Ran for 215550 frames Cell Events: 7819 mean_circ: 0.945156
Ran for 216050 frames Cell Events: 7842 mean_circ: 0.945167
Ran for 216550 frames Cell Events: 7861 mean_circ: 0.945146
Ran for 217050 frames Cell Events: 7872 mean_circ: 0.945158
Ran for 217550 frames Cell Events: 7890 mean_circ: 0.945181
Ran for 218050 frames Cell Events: 7905 mean_circ: 0.945195
Ran for 218550 frames Cell Events: 7927 mean_circ: 0.945147
Ran for 219050 frames Cell Events: 7951 mean_circ: 0.94517
Ran for 219550 frames Cell Events: 7968 mean_circ: 0.945142
Ran for 220550 frames Cell Events: 8005 mean_circ: 0.945162
Ran for 221050 frames Cell Events: 8032 mean_circ: 0.945182
Ran for 221550 frames Cell Events: 8052 mean_circ: 0.945161
Ran for 222550 frames Cell Events: 8090 mean_circ: 0.945152
Ran for 224050 frames Cell Events: 8148 mean_circ: 0.945123
Ran for 224550 frames Cell Events: 8171 mean_circ: 0.945123
Ran for 226050 frames Cell Events: 8256 mean_circ: 0.945067
Ran for 227050 frames Cell Events: 8298 mean_circ: 0.945042
Ran for 228050 frames Cell Events: 8331 mean_circ: 0.945064
Ran for 228550 frames Cell Events: 8352 mean_circ: 0.945068
Ran for 230050 frames Cell Events: 8414 mean_circ: 0.945037
Ran for 231550 frames Cell Events: 8485 mean_circ: 0.944958
Ran for 232050 frames Cell Events: 8507 mean_circ: 0.944972
Ran for 232550 frames Cell Events: 8527 mean_circ: 0.944977
Ran for 233550 frames Cell Events: 8563 mean_circ: 0.944967
Ran for 234550 frames Cell Events: 8607 mean_circ: 0.944974
Ran for 235050 frames Cell Events: 8628 mean_circ: 0.944961
Ran for 235550 frames Cell Events: 8648 mean_circ: 0.944989
Ran for 236550 frames Cell Events: 8681 mean_circ: 0.944979
Ran for 238050 frames Cell Events: 8753 mean_circ: 0.944965
Ran for 239550 frames Cell Events: 8808 mean_circ: 0.944989
Ran for 240050 frames Cell Events: 8823 mean_circ: 0.944978
Ran for 240550 frames Cell Events: 8837 mean_circ: 0.944967
Ran for 241550 frames Cell Events: 8885 mean_circ: 0.944917
Ran for 242050 frames Cell Events: 8901 mean_circ: 0.944864
Ran for 242550 frames Cell Events: 8923 mean_circ: 0.944854
Ran for 243050 frames Cell Events: 8947 mean_circ: 0.944848
Ran for 243550 frames Cell Events: 8966 mean_circ: 0.944849
Ran for 244050 frames Cell Events: 8979 mean_circ: 0.944844
Ran for 245550 frames Cell Events: 9036 mean_circ: 0.944892
Ran for 246050 frames Cell Events: 9053 mean_circ: 0.94487
Ran for 246550 frames Cell Events: 9076 mean_circ: 0.944868
Ran for 247050 frames Cell Events: 9100 mean_circ: 0.944867
Ran for 247550 frames Cell Events: 9117 mean_circ: 0.944849
Ran for 248050 frames Cell Events: 9140 mean_circ: 0.944809
Ran for 248550 frames Cell Events: 9164 mean_circ: 0.944833
Ran for 249550 frames Cell Events: 9196 mean_circ: 0.944846
Ran for 250050 frames Cell Events: 9223 mean_circ: 0.944854
Ran for 250550 frames Cell Events: 9256 mean_circ: 0.94485
Ran for 251050 frames Cell Events: 9276 mean_circ: 0.944848
Ran for 252050 frames Cell Events: 9314 mean_circ: 0.944853
Ran for 252550 frames Cell Events: 9333 mean_circ: 0.944843
Ran for 253050 frames Cell Events: 9352 mean_circ: 0.944844
Ran for 254050 frames Cell Events: 9379 mean_circ: 0.944848
Ran for 255550 frames Cell Events: 9442 mean_circ: 0.944824
Ran for 256550 frames Cell Events: 9499 mean_circ: 0.944823
Ran for 257050 frames Cell Events: 9516 mean_circ: 0.944785
Ran for 257550 frames Cell Events: 9545 mean_circ: 0.944732
Ran for 258550 frames Cell Events: 9600 mean_circ: 0.944686
Ran for 259050 frames Cell Events: 9633 mean_circ: 0.944688
Ran for 259550 frames Cell Events: 9662 mean_circ: 0.944697
Ran for 260050 frames Cell Events: 9683 mean_circ: 0.944716
Ran for 260550 frames Cell Events: 9703 mean_circ: 0.944715
Ran for 262050 frames Cell Events: 9778 mean_circ: 0.944714
Ran for 262550 frames Cell Events: 9803 mean_circ: 0.9447
Ran for 264050 frames Cell Events: 9863 mean_circ: 0.944704
Ran for 265050 frames Cell Events: 9922 mean_circ: 0.944653



End this measurment.
because stop condition (time/nr of cells) was met

Stopping time: 1.68493e+009
****************************************
Measurement finished

Mean Circularitiy: 0.94465
Mean Area: 625.514
Mean FL-1 intensity: 3323.26
Mean FL-2 intensity: 3071.72
Mean FL-3 intensity: 0

frames processed: 266455
Total Time: 133346ms
Number of Runs (new bg img) 0
Frames collected: 266566
Skipped frames: 193426
Rescued Frames: 5397933
Samples DAQ: 66641670
Samples written: 133282798
Samples per Channel: 66641399
FPS: 1999.06

Samples per second: 499764
Expected samples/s: 500000

Events: 10001
Events per second: 75.0005
jumped back (PMT): 5736
#Frames read, frequency
# 0 frames :374905
# 1 frames :137954
# 2 frames :5698
# 3 frames :2234
# 4 frames :1000
# 5 frames :430
# 6 frames :2339
# 7 frames :2082
# 8 frames :1271
# 9 frames :753
# 10 frames :1252
# 11 frames :814
# 12 frames :622
# 13 frames :317
# 14 frames :256
# 15 frames :194
# 16 frames :186
# 17 frames :149
# 18 frames :123
# 19 frames :82
# 20 frames :76
# 21 frames :56
# 22 frames :72
# 23 frames :37
# 24 frames :32
# 25 frames :15
# 26 frames :18
# 27 frames :16
# 28 frames :13
# 29 frames :13
# 30 frames :8
# 31 frames :8
# 32 frames :7
# 33 frames :5
# 34 frames :5
# 35 frames :4
# 36 frames :2
# 37 frames :5
# 39 frames :2
# 40 frames :2
# 41 frames :1
# 42 frames :1
# 43 frames :4
# 44 frames :1
# 50 frames :1
# 55 frames :1
# 56 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.1083
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0