Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-09_18.33.28 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "62d52aa648aa972e8a30240082e36ca5",
"name": "M1_20170519_1525_dsRNA_L4_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "16:34:01"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10000 (max 10001) in
'10000'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 26.3574
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 3.70979e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 18 mean_circ: 0.908792
Ran for 1050 frames Cell Events: 45 mean_circ: 0.91371
Ran for 2550 frames Cell Events: 96 mean_circ: 0.929993
Ran for 3050 frames Cell Events: 121 mean_circ: 0.930134
Ran for 4050 frames Cell Events: 157 mean_circ: 0.923661
Ran for 4550 frames Cell Events: 173 mean_circ: 0.924222
Ran for 5550 frames Cell Events: 222 mean_circ: 0.923811
Ran for 9550 frames Cell Events: 405 mean_circ: 0.924262
Ran for 11050 frames Cell Events: 468 mean_circ: 0.925755
Ran for 11550 frames Cell Events: 487 mean_circ: 0.925979
Ran for 12550 frames Cell Events: 527 mean_circ: 0.926038
Ran for 13050 frames Cell Events: 538 mean_circ: 0.926552
Ran for 13550 frames Cell Events: 556 mean_circ: 0.926364
Ran for 14050 frames Cell Events: 570 mean_circ: 0.926956
Ran for 14550 frames Cell Events: 588 mean_circ: 0.926887
Ran for 16550 frames Cell Events: 670 mean_circ: 0.92649
Ran for 17050 frames Cell Events: 689 mean_circ: 0.926322
Ran for 18550 frames Cell Events: 755 mean_circ: 0.926776
Ran for 19050 frames Cell Events: 770 mean_circ: 0.926504
Ran for 19550 frames Cell Events: 802 mean_circ: 0.926686
Ran for 20050 frames Cell Events: 822 mean_circ: 0.92645
Ran for 20550 frames Cell Events: 841 mean_circ: 0.926316
Ran for 21050 frames Cell Events: 857 mean_circ: 0.926214
Ran for 21550 frames Cell Events: 876 mean_circ: 0.925459
Ran for 22050 frames Cell Events: 900 mean_circ: 0.925317
Ran for 22550 frames Cell Events: 913 mean_circ: 0.925233
Ran for 23050 frames Cell Events: 925 mean_circ: 0.924944
Ran for 23550 frames Cell Events: 936 mean_circ: 0.925092
Ran for 24050 frames Cell Events: 949 mean_circ: 0.924829
Ran for 24550 frames Cell Events: 964 mean_circ: 0.924757
Ran for 25050 frames Cell Events: 983 mean_circ: 0.924752
Ran for 26050 frames Cell Events: 1029 mean_circ: 0.925198
Ran for 27050 frames Cell Events: 1059 mean_circ: 0.925509
Ran for 27550 frames Cell Events: 1072 mean_circ: 0.925578
Ran for 29550 frames Cell Events: 1169 mean_circ: 0.925153
Ran for 30050 frames Cell Events: 1188 mean_circ: 0.924909
Ran for 30550 frames Cell Events: 1197 mean_circ: 0.925188
Ran for 31050 frames Cell Events: 1210 mean_circ: 0.925503
Ran for 31550 frames Cell Events: 1219 mean_circ: 0.925422
Ran for 32050 frames Cell Events: 1226 mean_circ: 0.925484
Ran for 32550 frames Cell Events: 1246 mean_circ: 0.925665
Ran for 33050 frames Cell Events: 1269 mean_circ: 0.925651
Ran for 33550 frames Cell Events: 1284 mean_circ: 0.925576
Ran for 34050 frames Cell Events: 1304 mean_circ: 0.925597
Ran for 34550 frames Cell Events: 1317 mean_circ: 0.92555
Ran for 35550 frames Cell Events: 1335 mean_circ: 0.92578
Ran for 36550 frames Cell Events: 1367 mean_circ: 0.926072
Ran for 38050 frames Cell Events: 1416 mean_circ: 0.926271
Ran for 38550 frames Cell Events: 1436 mean_circ: 0.926192
Ran for 39050 frames Cell Events: 1446 mean_circ: 0.926299
Ran for 41050 frames Cell Events: 1518 mean_circ: 0.926131
Ran for 41550 frames Cell Events: 1531 mean_circ: 0.926313
Ran for 43050 frames Cell Events: 1590 mean_circ: 0.926265
Ran for 43550 frames Cell Events: 1605 mean_circ: 0.926208
Ran for 45050 frames Cell Events: 1666 mean_circ: 0.926646
Ran for 45550 frames Cell Events: 1681 mean_circ: 0.926729
Ran for 47050 frames Cell Events: 1724 mean_circ: 0.926543
Ran for 47550 frames Cell Events: 1742 mean_circ: 0.926594
Ran for 48050 frames Cell Events: 1759 mean_circ: 0.926739
Ran for 48550 frames Cell Events: 1773 mean_circ: 0.92675
Ran for 49050 frames Cell Events: 1789 mean_circ: 0.926621
Ran for 49550 frames Cell Events: 1803 mean_circ: 0.926538
Ran for 50550 frames Cell Events: 1835 mean_circ: 0.926567
Ran for 51050 frames Cell Events: 1855 mean_circ: 0.926562
Ran for 52550 frames Cell Events: 1913 mean_circ: 0.926532
Ran for 53050 frames Cell Events: 1926 mean_circ: 0.926496
Ran for 53550 frames Cell Events: 1935 mean_circ: 0.926507
Ran for 54050 frames Cell Events: 1948 mean_circ: 0.926487
Ran for 55050 frames Cell Events: 1995 mean_circ: 0.926446
Ran for 55550 frames Cell Events: 2015 mean_circ: 0.926154
Ran for 56550 frames Cell Events: 2041 mean_circ: 0.926226
Ran for 57050 frames Cell Events: 2072 mean_circ: 0.926302
Ran for 58050 frames Cell Events: 2122 mean_circ: 0.926045
Ran for 58550 frames Cell Events: 2139 mean_circ: 0.925878
Ran for 59050 frames Cell Events: 2155 mean_circ: 0.925694
Ran for 59550 frames Cell Events: 2172 mean_circ: 0.925673
Ran for 60050 frames Cell Events: 2181 mean_circ: 0.925763
Ran for 60550 frames Cell Events: 2200 mean_circ: 0.925736
Ran for 63050 frames Cell Events: 2280 mean_circ: 0.925734
Ran for 63550 frames Cell Events: 2296 mean_circ: 0.925622
Ran for 64550 frames Cell Events: 2330 mean_circ: 0.925715
Ran for 65050 frames Cell Events: 2342 mean_circ: 0.925584
Ran for 65550 frames Cell Events: 2364 mean_circ: 0.925644
Ran for 66050 frames Cell Events: 2373 mean_circ: 0.925723
Ran for 66550 frames Cell Events: 2387 mean_circ: 0.925676
Ran for 67050 frames Cell Events: 2417 mean_circ: 0.925785
Ran for 67550 frames Cell Events: 2434 mean_circ: 0.925828
Ran for 68050 frames Cell Events: 2455 mean_circ: 0.925862
Ran for 69550 frames Cell Events: 2535 mean_circ: 0.925807
Ran for 70050 frames Cell Events: 2561 mean_circ: 0.925807
Ran for 70550 frames Cell Events: 2589 mean_circ: 0.925922
Ran for 71550 frames Cell Events: 2633 mean_circ: 0.925698
Ran for 72050 frames Cell Events: 2644 mean_circ: 0.925726
Ran for 72550 frames Cell Events: 2663 mean_circ: 0.925676
Ran for 73050 frames Cell Events: 2683 mean_circ: 0.925694
Ran for 74050 frames Cell Events: 2717 mean_circ: 0.925819
Ran for 74550 frames Cell Events: 2745 mean_circ: 0.925775
Ran for 75050 frames Cell Events: 2758 mean_circ: 0.925891
Ran for 75550 frames Cell Events: 2782 mean_circ: 0.925748
Ran for 76050 frames Cell Events: 2798 mean_circ: 0.925807
Ran for 77050 frames Cell Events: 2844 mean_circ: 0.925682
Ran for 77550 frames Cell Events: 2858 mean_circ: 0.92565
Ran for 78050 frames Cell Events: 2890 mean_circ: 0.925578
Ran for 78550 frames Cell Events: 2924 mean_circ: 0.925102
Ran for 79050 frames Cell Events: 2963 mean_circ: 0.925012
Ran for 79550 frames Cell Events: 2986 mean_circ: 0.925027
Ran for 80050 frames Cell Events: 3001 mean_circ: 0.924936
Ran for 81050 frames Cell Events: 3038 mean_circ: 0.924972
Ran for 81550 frames Cell Events: 3066 mean_circ: 0.924767
Ran for 82050 frames Cell Events: 3085 mean_circ: 0.924865
Ran for 82550 frames Cell Events: 3111 mean_circ: 0.924903
Ran for 83050 frames Cell Events: 3133 mean_circ: 0.924806
Ran for 84550 frames Cell Events: 3188 mean_circ: 0.924704
Ran for 85550 frames Cell Events: 3232 mean_circ: 0.924636
Ran for 86550 frames Cell Events: 3292 mean_circ: 0.924552
Ran for 87550 frames Cell Events: 3347 mean_circ: 0.924638
Ran for 88550 frames Cell Events: 3386 mean_circ: 0.924531
Ran for 89050 frames Cell Events: 3408 mean_circ: 0.924551
Ran for 89550 frames Cell Events: 3430 mean_circ: 0.924456
Ran for 92550 frames Cell Events: 3567 mean_circ: 0.924336
Ran for 93050 frames Cell Events: 3575 mean_circ: 0.924347
Ran for 93550 frames Cell Events: 3598 mean_circ: 0.92443
Ran for 94550 frames Cell Events: 3635 mean_circ: 0.924421
Ran for 95050 frames Cell Events: 3643 mean_circ: 0.924484
Ran for 97550 frames Cell Events: 3729 mean_circ: 0.924637
Ran for 98050 frames Cell Events: 3745 mean_circ: 0.924711
Ran for 98550 frames Cell Events: 3762 mean_circ: 0.924803
Ran for 99050 frames Cell Events: 3779 mean_circ: 0.924859
Ran for 99550 frames Cell Events: 3798 mean_circ: 0.924872
Ran for 100050 frames Cell Events: 3824 mean_circ: 0.924747
Ran for 101050 frames Cell Events: 3881 mean_circ: 0.924607
Ran for 102050 frames Cell Events: 3931 mean_circ: 0.924723
Ran for 102550 frames Cell Events: 3952 mean_circ: 0.924864
Ran for 104550 frames Cell Events: 4049 mean_circ: 0.924806
Ran for 105550 frames Cell Events: 4071 mean_circ: 0.924698
Ran for 107050 frames Cell Events: 4124 mean_circ: 0.924768
Ran for 108050 frames Cell Events: 4170 mean_circ: 0.924875
Ran for 108550 frames Cell Events: 4193 mean_circ: 0.92491
Ran for 109550 frames Cell Events: 4225 mean_circ: 0.924982
Ran for 110050 frames Cell Events: 4238 mean_circ: 0.924973
Ran for 110550 frames Cell Events: 4256 mean_circ: 0.924957
Ran for 111050 frames Cell Events: 4270 mean_circ: 0.924915
Ran for 111550 frames Cell Events: 4292 mean_circ: 0.924936
Ran for 113050 frames Cell Events: 4367 mean_circ: 0.924845
Ran for 115550 frames Cell Events: 4499 mean_circ: 0.92503
Ran for 116050 frames Cell Events: 4526 mean_circ: 0.92514
Ran for 117050 frames Cell Events: 4591 mean_circ: 0.924903
Ran for 118050 frames Cell Events: 4627 mean_circ: 0.924847
Ran for 119050 frames Cell Events: 4651 mean_circ: 0.92484
Ran for 119550 frames Cell Events: 4663 mean_circ: 0.924811
Ran for 120550 frames Cell Events: 4711 mean_circ: 0.924689
Ran for 121550 frames Cell Events: 4768 mean_circ: 0.924808
Ran for 122050 frames Cell Events: 4786 mean_circ: 0.924796
Ran for 124050 frames Cell Events: 4875 mean_circ: 0.924516
Ran for 124550 frames Cell Events: 4901 mean_circ: 0.924529
Ran for 125550 frames Cell Events: 4952 mean_circ: 0.92447
Ran for 126550 frames Cell Events: 4979 mean_circ: 0.924477
Ran for 127050 frames Cell Events: 5001 mean_circ: 0.924448
Ran for 127550 frames Cell Events: 5027 mean_circ: 0.92435
Ran for 129050 frames Cell Events: 5086 mean_circ: 0.924347
Ran for 129550 frames Cell Events: 5105 mean_circ: 0.924257
Ran for 130050 frames Cell Events: 5117 mean_circ: 0.924322
Ran for 131550 frames Cell Events: 5188 mean_circ: 0.924398
Ran for 132050 frames Cell Events: 5202 mean_circ: 0.924366
Ran for 133050 frames Cell Events: 5250 mean_circ: 0.924322
Ran for 133550 frames Cell Events: 5264 mean_circ: 0.924354
Ran for 134050 frames Cell Events: 5282 mean_circ: 0.924382
Ran for 134550 frames Cell Events: 5299 mean_circ: 0.924453
Ran for 135050 frames Cell Events: 5316 mean_circ: 0.924467
Ran for 136050 frames Cell Events: 5358 mean_circ: 0.924483
Ran for 137050 frames Cell Events: 5398 mean_circ: 0.924466
Ran for 137550 frames Cell Events: 5427 mean_circ: 0.924479
Ran for 138050 frames Cell Events: 5445 mean_circ: 0.924465
Ran for 138550 frames Cell Events: 5467 mean_circ: 0.924472
Ran for 139050 frames Cell Events: 5479 mean_circ: 0.924536
Ran for 139550 frames Cell Events: 5498 mean_circ: 0.924478
Ran for 140050 frames Cell Events: 5509 mean_circ: 0.924422
Ran for 140550 frames Cell Events: 5520 mean_circ: 0.924426
Ran for 141050 frames Cell Events: 5539 mean_circ: 0.924413
Ran for 141550 frames Cell Events: 5567 mean_circ: 0.924432
Ran for 142550 frames Cell Events: 5623 mean_circ: 0.924416
Ran for 143550 frames Cell Events: 5666 mean_circ: 0.924578
Ran for 145050 frames Cell Events: 5737 mean_circ: 0.92459
Ran for 145550 frames Cell Events: 5755 mean_circ: 0.924604
Ran for 146050 frames Cell Events: 5787 mean_circ: 0.924604
Ran for 146550 frames Cell Events: 5807 mean_circ: 0.924482
Ran for 147050 frames Cell Events: 5817 mean_circ: 0.924456
Ran for 147550 frames Cell Events: 5843 mean_circ: 0.924438
Ran for 148050 frames Cell Events: 5862 mean_circ: 0.92443
Ran for 148550 frames Cell Events: 5887 mean_circ: 0.92446
Ran for 149050 frames Cell Events: 5909 mean_circ: 0.924546
Ran for 149550 frames Cell Events: 5931 mean_circ: 0.9246
Ran for 150050 frames Cell Events: 5942 mean_circ: 0.924633
Ran for 150550 frames Cell Events: 5975 mean_circ: 0.924633
Ran for 151050 frames Cell Events: 5998 mean_circ: 0.924511
Ran for 152050 frames Cell Events: 6052 mean_circ: 0.924532
Ran for 152550 frames Cell Events: 6067 mean_circ: 0.924522
Ran for 153050 frames Cell Events: 6088 mean_circ: 0.924526
Ran for 153550 frames Cell Events: 6108 mean_circ: 0.924578
Ran for 155550 frames Cell Events: 6223 mean_circ: 0.924537
Ran for 156050 frames Cell Events: 6249 mean_circ: 0.924519
Ran for 156550 frames Cell Events: 6266 mean_circ: 0.924581
Ran for 157550 frames Cell Events: 6308 mean_circ: 0.924571
Ran for 158050 frames Cell Events: 6329 mean_circ: 0.924558
Ran for 158550 frames Cell Events: 6353 mean_circ: 0.924541
Ran for 159550 frames Cell Events: 6420 mean_circ: 0.924411
Ran for 160050 frames Cell Events: 6437 mean_circ: 0.924411
Ran for 160550 frames Cell Events: 6468 mean_circ: 0.924387
Ran for 161550 frames Cell Events: 6497 mean_circ: 0.924409
Ran for 162550 frames Cell Events: 6545 mean_circ: 0.924477
Ran for 163050 frames Cell Events: 6556 mean_circ: 0.924487
Ran for 163550 frames Cell Events: 6574 mean_circ: 0.924465
Ran for 164550 frames Cell Events: 6620 mean_circ: 0.924511
Ran for 165050 frames Cell Events: 6640 mean_circ: 0.924544
Ran for 165550 frames Cell Events: 6655 mean_circ: 0.924579
Ran for 166550 frames Cell Events: 6692 mean_circ: 0.924556
Ran for 167050 frames Cell Events: 6706 mean_circ: 0.924546
Ran for 167550 frames Cell Events: 6724 mean_circ: 0.924545
Ran for 168050 frames Cell Events: 6751 mean_circ: 0.92457
Ran for 169050 frames Cell Events: 6780 mean_circ: 0.924585
Ran for 170550 frames Cell Events: 6851 mean_circ: 0.924468
Ran for 171050 frames Cell Events: 6865 mean_circ: 0.924427
Ran for 172550 frames Cell Events: 6923 mean_circ: 0.924475
Ran for 173050 frames Cell Events: 6952 mean_circ: 0.924434
Ran for 173550 frames Cell Events: 6982 mean_circ: 0.924325
Ran for 174550 frames Cell Events: 7018 mean_circ: 0.924364
Ran for 175050 frames Cell Events: 7037 mean_circ: 0.924346
Ran for 175550 frames Cell Events: 7060 mean_circ: 0.924354
Ran for 176050 frames Cell Events: 7073 mean_circ: 0.924367
Ran for 176550 frames Cell Events: 7091 mean_circ: 0.92438
Ran for 177050 frames Cell Events: 7106 mean_circ: 0.924343
Ran for 178050 frames Cell Events: 7159 mean_circ: 0.924334
Ran for 178550 frames Cell Events: 7176 mean_circ: 0.924368
Ran for 179050 frames Cell Events: 7205 mean_circ: 0.924355
Ran for 179550 frames Cell Events: 7236 mean_circ: 0.924314
Ran for 180050 frames Cell Events: 7258 mean_circ: 0.924325
Ran for 180550 frames Cell Events: 7276 mean_circ: 0.924316
Ran for 181050 frames Cell Events: 7302 mean_circ: 0.924321
Ran for 182050 frames Cell Events: 7354 mean_circ: 0.924276
Ran for 183050 frames Cell Events: 7396 mean_circ: 0.924304
Ran for 183550 frames Cell Events: 7425 mean_circ: 0.924312
Ran for 184550 frames Cell Events: 7459 mean_circ: 0.924353
Ran for 185050 frames Cell Events: 7488 mean_circ: 0.924344
Ran for 186050 frames Cell Events: 7542 mean_circ: 0.92434
Ran for 189550 frames Cell Events: 7701 mean_circ: 0.924298
Ran for 190050 frames Cell Events: 7721 mean_circ: 0.924339
Ran for 191050 frames Cell Events: 7760 mean_circ: 0.924337
Ran for 191550 frames Cell Events: 7782 mean_circ: 0.924343
Ran for 192050 frames Cell Events: 7794 mean_circ: 0.92432
Ran for 194550 frames Cell Events: 7897 mean_circ: 0.924379
Ran for 196050 frames Cell Events: 7960 mean_circ: 0.924374
Ran for 197050 frames Cell Events: 8019 mean_circ: 0.924427
Ran for 197550 frames Cell Events: 8042 mean_circ: 0.924424
Ran for 198550 frames Cell Events: 8094 mean_circ: 0.924328
Ran for 199050 frames Cell Events: 8106 mean_circ: 0.924351
Ran for 200050 frames Cell Events: 8149 mean_circ: 0.924354
Ran for 200550 frames Cell Events: 8172 mean_circ: 0.924317
Ran for 201550 frames Cell Events: 8207 mean_circ: 0.924302
Ran for 202050 frames Cell Events: 8228 mean_circ: 0.92424
Ran for 202550 frames Cell Events: 8245 mean_circ: 0.924213
Ran for 203050 frames Cell Events: 8268 mean_circ: 0.924204
Ran for 204050 frames Cell Events: 8312 mean_circ: 0.924202
Ran for 204550 frames Cell Events: 8329 mean_circ: 0.924198
Ran for 205550 frames Cell Events: 8370 mean_circ: 0.924113
Ran for 206050 frames Cell Events: 8392 mean_circ: 0.924135
Ran for 206550 frames Cell Events: 8413 mean_circ: 0.924117
Ran for 207050 frames Cell Events: 8435 mean_circ: 0.924141
Ran for 207550 frames Cell Events: 8450 mean_circ: 0.924169
Ran for 208550 frames Cell Events: 8489 mean_circ: 0.924222
Ran for 209050 frames Cell Events: 8513 mean_circ: 0.924216
Ran for 209550 frames Cell Events: 8544 mean_circ: 0.924225
Ran for 210050 frames Cell Events: 8559 mean_circ: 0.924248
Ran for 210550 frames Cell Events: 8570 mean_circ: 0.924245
Ran for 211050 frames Cell Events: 8596 mean_circ: 0.924197
Ran for 211550 frames Cell Events: 8614 mean_circ: 0.924209
Ran for 212050 frames Cell Events: 8636 mean_circ: 0.924207
Ran for 213050 frames Cell Events: 8677 mean_circ: 0.924223
Ran for 214050 frames Cell Events: 8721 mean_circ: 0.924221
Ran for 214550 frames Cell Events: 8758 mean_circ: 0.924213
Ran for 215050 frames Cell Events: 8781 mean_circ: 0.924169
Ran for 215550 frames Cell Events: 8800 mean_circ: 0.924153
Ran for 216050 frames Cell Events: 8821 mean_circ: 0.924135
Ran for 216550 frames Cell Events: 8844 mean_circ: 0.924145
Ran for 217050 frames Cell Events: 8859 mean_circ: 0.924199
Ran for 219050 frames Cell Events: 8967 mean_circ: 0.92421
Ran for 219550 frames Cell Events: 8989 mean_circ: 0.924151
Ran for 220550 frames Cell Events: 9036 mean_circ: 0.92415
Ran for 221050 frames Cell Events: 9068 mean_circ: 0.924199
Ran for 221550 frames Cell Events: 9091 mean_circ: 0.924209
Ran for 222550 frames Cell Events: 9135 mean_circ: 0.924252
Ran for 225050 frames Cell Events: 9270 mean_circ: 0.924106
Ran for 226050 frames Cell Events: 9314 mean_circ: 0.924138
Ran for 226550 frames Cell Events: 9337 mean_circ: 0.924154
Ran for 228050 frames Cell Events: 9391 mean_circ: 0.924177
Ran for 229550 frames Cell Events: 9443 mean_circ: 0.924203
Ran for 230050 frames Cell Events: 9465 mean_circ: 0.924174
Ran for 231050 frames Cell Events: 9507 mean_circ: 0.924148
Ran for 232050 frames Cell Events: 9539 mean_circ: 0.924043
Ran for 232550 frames Cell Events: 9560 mean_circ: 0.924069
Ran for 233550 frames Cell Events: 9626 mean_circ: 0.924068
Ran for 234050 frames Cell Events: 9648 mean_circ: 0.924097
Ran for 235050 frames Cell Events: 9689 mean_circ: 0.924069
Ran for 235550 frames Cell Events: 9706 mean_circ: 0.924036
Ran for 236050 frames Cell Events: 9740 mean_circ: 0.923992
Ran for 237050 frames Cell Events: 9783 mean_circ: 0.923973
Ran for 239050 frames Cell Events: 9865 mean_circ: 0.923837
Ran for 239550 frames Cell Events: 9889 mean_circ: 0.923874
Ran for 240050 frames Cell Events: 9912 mean_circ: 0.923876
Ran for 240550 frames Cell Events: 9932 mean_circ: 0.923838
Ran for 241050 frames Cell Events: 9947 mean_circ: 0.923795
Ran for 242050 frames Cell Events: 9984 mean_circ: 0.923755



End this measurment.
because stop condition (time/nr of cells) was met

Stopping time: 3.71101e+008
****************************************
Measurement finished

Mean Circularitiy: 0.923739
Mean Area: 683.817
Mean FL-1 intensity: 3343.59
Mean FL-2 intensity: 4214.76
Mean FL-3 intensity: 0

frames processed: 242161
Total Time: 121287ms
Number of Runs (new bg img) 0
Frames collected: 242397
Skipped frames: 44913
Rescued Frames: 2165236
Samples DAQ: 60599369
Samples written: 121198402
Samples per Channel: 60599201
FPS: 1998.53

Samples per second: 499633
Expected samples/s: 500000

Events: 10001
Events per second: 82.4571
jumped back (PMT): 4880
#Frames read, frequency
# 0 frames :353654
# 1 frames :112616
# 2 frames :4617
# 3 frames :1985
# 4 frames :1101
# 5 frames :499
# 6 frames :1356
# 7 frames :2155
# 8 frames :1206
# 9 frames :788
# 10 frames :1206
# 11 frames :808
# 12 frames :540
# 13 frames :325
# 14 frames :277
# 15 frames :257
# 16 frames :248
# 17 frames :209
# 18 frames :178
# 19 frames :136
# 20 frames :83
# 21 frames :93
# 22 frames :66
# 23 frames :51
# 24 frames :43
# 25 frames :43
# 26 frames :27
# 27 frames :16
# 28 frames :22
# 29 frames :25
# 30 frames :25
# 31 frames :11
# 32 frames :13
# 33 frames :11
# 34 frames :9
# 35 frames :4
# 36 frames :9
# 37 frames :7
# 38 frames :7
# 39 frames :3
# 40 frames :3
# 41 frames :4
# 42 frames :3
# 43 frames :1
# 48 frames :2
# 50 frames :3
# 52 frames :1
# 56 frames :1
# 61 frames :1
# 67 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 26.3574
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0