Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_18.09.15 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "2ce760a357b8c25c1cc1f776a543e9d4",
"name": "M1_20170616_1410_dsRNA_O6_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "16:09:37"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8583 (max 8584) in '8583'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.7926
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.12396e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 2 mean_circ: 0.937543
Ran for 550 frames Cell Events: 15 mean_circ: 0.93935
Ran for 2550 frames Cell Events: 73 mean_circ: 0.941753
Ran for 3050 frames Cell Events: 91 mean_circ: 0.940155
Ran for 3550 frames Cell Events: 112 mean_circ: 0.940403
Ran for 4050 frames Cell Events: 128 mean_circ: 0.944049
Ran for 5050 frames Cell Events: 157 mean_circ: 0.944002
Ran for 5550 frames Cell Events: 171 mean_circ: 0.945409
Ran for 6050 frames Cell Events: 188 mean_circ: 0.944488
Ran for 6550 frames Cell Events: 199 mean_circ: 0.943322
Ran for 7050 frames Cell Events: 213 mean_circ: 0.943419
Ran for 7550 frames Cell Events: 236 mean_circ: 0.942578
Ran for 8050 frames Cell Events: 254 mean_circ: 0.943022
Ran for 8550 frames Cell Events: 263 mean_circ: 0.942729
Ran for 9050 frames Cell Events: 276 mean_circ: 0.941574
Ran for 9550 frames Cell Events: 292 mean_circ: 0.941804
Ran for 10050 frames Cell Events: 304 mean_circ: 0.942139
Ran for 10550 frames Cell Events: 316 mean_circ: 0.941703
Ran for 11050 frames Cell Events: 331 mean_circ: 0.942176
Ran for 11550 frames Cell Events: 346 mean_circ: 0.942557
Ran for 12050 frames Cell Events: 365 mean_circ: 0.94271
Ran for 13050 frames Cell Events: 415 mean_circ: 0.943969
Ran for 13550 frames Cell Events: 431 mean_circ: 0.943945
Ran for 14050 frames Cell Events: 441 mean_circ: 0.944232
Ran for 15050 frames Cell Events: 489 mean_circ: 0.944736
Ran for 15550 frames Cell Events: 497 mean_circ: 0.944921
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Ran for 16550 frames Cell Events: 518 mean_circ: 0.945227
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Ran for 17550 frames Cell Events: 550 mean_circ: 0.945255
Ran for 19050 frames Cell Events: 611 mean_circ: 0.945513
Ran for 20050 frames Cell Events: 649 mean_circ: 0.945632
Ran for 21550 frames Cell Events: 691 mean_circ: 0.944998
Ran for 22050 frames Cell Events: 710 mean_circ: 0.94492
Ran for 22550 frames Cell Events: 724 mean_circ: 0.945214
Ran for 24050 frames Cell Events: 781 mean_circ: 0.944507
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Ran for 27550 frames Cell Events: 868 mean_circ: 0.944847
Ran for 28050 frames Cell Events: 877 mean_circ: 0.944798
Ran for 28550 frames Cell Events: 895 mean_circ: 0.944944
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Ran for 29550 frames Cell Events: 922 mean_circ: 0.944805
Ran for 30550 frames Cell Events: 953 mean_circ: 0.944922
Ran for 31550 frames Cell Events: 979 mean_circ: 0.94429
Ran for 32050 frames Cell Events: 990 mean_circ: 0.944258
Ran for 33050 frames Cell Events: 1019 mean_circ: 0.944264
Ran for 33550 frames Cell Events: 1031 mean_circ: 0.943811
Ran for 34550 frames Cell Events: 1059 mean_circ: 0.943476
Ran for 35050 frames Cell Events: 1068 mean_circ: 0.943554
Ran for 35550 frames Cell Events: 1074 mean_circ: 0.943481
Ran for 36050 frames Cell Events: 1090 mean_circ: 0.943183
Ran for 36550 frames Cell Events: 1098 mean_circ: 0.943306
Ran for 37050 frames Cell Events: 1108 mean_circ: 0.943371
Ran for 37550 frames Cell Events: 1123 mean_circ: 0.943533
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Ran for 39050 frames Cell Events: 1167 mean_circ: 0.943676
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Ran for 44050 frames Cell Events: 1356 mean_circ: 0.943788
Ran for 44550 frames Cell Events: 1380 mean_circ: 0.944018
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Ran for 45550 frames Cell Events: 1413 mean_circ: 0.944155
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Ran for 47050 frames Cell Events: 1441 mean_circ: 0.943989
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Ran for 56550 frames Cell Events: 1711 mean_circ: 0.94423
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Ran for 57550 frames Cell Events: 1739 mean_circ: 0.944402
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Ran for 59050 frames Cell Events: 1789 mean_circ: 0.944503
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Ran for 60550 frames Cell Events: 1828 mean_circ: 0.944523
Ran for 61050 frames Cell Events: 1839 mean_circ: 0.944546
Ran for 61550 frames Cell Events: 1848 mean_circ: 0.944613
Ran for 62550 frames Cell Events: 1874 mean_circ: 0.944619
Ran for 63050 frames Cell Events: 1890 mean_circ: 0.944641
Ran for 63550 frames Cell Events: 1898 mean_circ: 0.94468
Ran for 64050 frames Cell Events: 1913 mean_circ: 0.944677
Ran for 64550 frames Cell Events: 1921 mean_circ: 0.944732
Ran for 65550 frames Cell Events: 1945 mean_circ: 0.94476
Ran for 66050 frames Cell Events: 1959 mean_circ: 0.944793
Ran for 66550 frames Cell Events: 1979 mean_circ: 0.944811
Ran for 68050 frames Cell Events: 2015 mean_circ: 0.944962
Ran for 68550 frames Cell Events: 2035 mean_circ: 0.944828
Ran for 69050 frames Cell Events: 2044 mean_circ: 0.944849
Ran for 69550 frames Cell Events: 2056 mean_circ: 0.944896
Ran for 70050 frames Cell Events: 2072 mean_circ: 0.944855
Ran for 71050 frames Cell Events: 2098 mean_circ: 0.944731
Ran for 71550 frames Cell Events: 2114 mean_circ: 0.944864
Ran for 72050 frames Cell Events: 2129 mean_circ: 0.944815
Ran for 73050 frames Cell Events: 2165 mean_circ: 0.944793
Ran for 74050 frames Cell Events: 2197 mean_circ: 0.944796
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Ran for 75050 frames Cell Events: 2230 mean_circ: 0.944794
Ran for 76550 frames Cell Events: 2268 mean_circ: 0.944859
Ran for 77050 frames Cell Events: 2292 mean_circ: 0.944928
Ran for 77550 frames Cell Events: 2315 mean_circ: 0.945065
Ran for 78050 frames Cell Events: 2328 mean_circ: 0.944856
Ran for 79050 frames Cell Events: 2359 mean_circ: 0.944908
Ran for 80050 frames Cell Events: 2389 mean_circ: 0.94497
Ran for 80550 frames Cell Events: 2402 mean_circ: 0.944989
Ran for 81050 frames Cell Events: 2412 mean_circ: 0.94502
Ran for 83050 frames Cell Events: 2487 mean_circ: 0.944959
Ran for 84550 frames Cell Events: 2532 mean_circ: 0.944836
Ran for 85050 frames Cell Events: 2538 mean_circ: 0.9448
Ran for 85550 frames Cell Events: 2549 mean_circ: 0.944726
Ran for 86050 frames Cell Events: 2568 mean_circ: 0.944707
Ran for 86550 frames Cell Events: 2594 mean_circ: 0.944591
Ran for 87050 frames Cell Events: 2604 mean_circ: 0.944559
Ran for 87550 frames Cell Events: 2628 mean_circ: 0.944637
Ran for 88050 frames Cell Events: 2642 mean_circ: 0.944581
Ran for 89050 frames Cell Events: 2661 mean_circ: 0.944536
Ran for 89550 frames Cell Events: 2675 mean_circ: 0.944555
Ran for 90050 frames Cell Events: 2684 mean_circ: 0.944608
Ran for 91050 frames Cell Events: 2715 mean_circ: 0.944564
Ran for 92550 frames Cell Events: 2777 mean_circ: 0.944464
Ran for 93550 frames Cell Events: 2807 mean_circ: 0.944422
Ran for 94550 frames Cell Events: 2837 mean_circ: 0.944512
Ran for 95050 frames Cell Events: 2853 mean_circ: 0.944573
Ran for 95550 frames Cell Events: 2879 mean_circ: 0.944554
Ran for 96050 frames Cell Events: 2899 mean_circ: 0.944531
Ran for 97550 frames Cell Events: 2949 mean_circ: 0.944708
Ran for 98550 frames Cell Events: 2994 mean_circ: 0.944773
Ran for 100050 frames Cell Events: 3110 mean_circ: 0.944794
Ran for 100550 frames Cell Events: 3145 mean_circ: 0.944797
Ran for 101050 frames Cell Events: 3167 mean_circ: 0.944796
Ran for 102050 frames Cell Events: 3211 mean_circ: 0.94475
Ran for 102550 frames Cell Events: 3225 mean_circ: 0.944726
Ran for 105550 frames Cell Events: 3345 mean_circ: 0.944732
Ran for 106050 frames Cell Events: 3365 mean_circ: 0.944775
Ran for 106550 frames Cell Events: 3379 mean_circ: 0.944772
Ran for 107550 frames Cell Events: 3423 mean_circ: 0.944835
Ran for 108050 frames Cell Events: 3439 mean_circ: 0.944804
Ran for 108550 frames Cell Events: 3456 mean_circ: 0.944789
Ran for 109050 frames Cell Events: 3464 mean_circ: 0.944766
Ran for 110050 frames Cell Events: 3489 mean_circ: 0.94471
Ran for 110550 frames Cell Events: 3507 mean_circ: 0.944705
Ran for 112550 frames Cell Events: 3560 mean_circ: 0.944669
Ran for 113550 frames Cell Events: 3584 mean_circ: 0.944697
Ran for 114550 frames Cell Events: 3620 mean_circ: 0.944763
Ran for 115550 frames Cell Events: 3653 mean_circ: 0.94466
Ran for 116050 frames Cell Events: 3669 mean_circ: 0.944688
Ran for 116550 frames Cell Events: 3677 mean_circ: 0.944714
Ran for 117050 frames Cell Events: 3694 mean_circ: 0.944695
Ran for 118050 frames Cell Events: 3729 mean_circ: 0.944681
Ran for 118550 frames Cell Events: 3749 mean_circ: 0.944703
Ran for 119050 frames Cell Events: 3765 mean_circ: 0.944721
Ran for 119550 frames Cell Events: 3786 mean_circ: 0.944664
Ran for 120550 frames Cell Events: 3821 mean_circ: 0.944566
Ran for 121050 frames Cell Events: 3836 mean_circ: 0.944602
Ran for 121550 frames Cell Events: 3842 mean_circ: 0.944572
Ran for 122050 frames Cell Events: 3857 mean_circ: 0.944555
Ran for 122550 frames Cell Events: 3873 mean_circ: 0.944541
Ran for 123050 frames Cell Events: 3891 mean_circ: 0.944486
Ran for 124550 frames Cell Events: 3941 mean_circ: 0.944532
Ran for 125050 frames Cell Events: 3953 mean_circ: 0.944544
Ran for 126050 frames Cell Events: 3979 mean_circ: 0.944515
Ran for 127550 frames Cell Events: 4030 mean_circ: 0.944412
Ran for 128050 frames Cell Events: 4043 mean_circ: 0.944408
Ran for 128550 frames Cell Events: 4061 mean_circ: 0.944386
Ran for 129050 frames Cell Events: 4080 mean_circ: 0.944342
Ran for 130050 frames Cell Events: 4102 mean_circ: 0.944358
Ran for 130550 frames Cell Events: 4114 mean_circ: 0.944351
Ran for 131550 frames Cell Events: 4163 mean_circ: 0.944466
Ran for 132550 frames Cell Events: 4195 mean_circ: 0.944471
Ran for 133050 frames Cell Events: 4207 mean_circ: 0.944521
Ran for 133550 frames Cell Events: 4213 mean_circ: 0.944518
Ran for 135050 frames Cell Events: 4260 mean_circ: 0.944493
Ran for 136050 frames Cell Events: 4292 mean_circ: 0.94451
Ran for 137050 frames Cell Events: 4325 mean_circ: 0.944522
Ran for 137550 frames Cell Events: 4343 mean_circ: 0.944515
Ran for 138050 frames Cell Events: 4357 mean_circ: 0.94448
Ran for 139050 frames Cell Events: 4390 mean_circ: 0.944499
Ran for 139550 frames Cell Events: 4402 mean_circ: 0.944519
Ran for 140050 frames Cell Events: 4421 mean_circ: 0.944433
Ran for 140550 frames Cell Events: 4439 mean_circ: 0.944446
Ran for 141050 frames Cell Events: 4450 mean_circ: 0.94443
Ran for 141550 frames Cell Events: 4469 mean_circ: 0.944357
Ran for 142050 frames Cell Events: 4488 mean_circ: 0.94431
Ran for 142550 frames Cell Events: 4498 mean_circ: 0.94431
Ran for 143050 frames Cell Events: 4512 mean_circ: 0.944353
Ran for 143550 frames Cell Events: 4534 mean_circ: 0.944325
Ran for 144050 frames Cell Events: 4554 mean_circ: 0.944357
Ran for 144550 frames Cell Events: 4569 mean_circ: 0.944396
Ran for 145550 frames Cell Events: 4599 mean_circ: 0.944353
Ran for 146050 frames Cell Events: 4616 mean_circ: 0.944362
Ran for 146550 frames Cell Events: 4624 mean_circ: 0.944395
Ran for 147550 frames Cell Events: 4651 mean_circ: 0.944418
Ran for 148050 frames Cell Events: 4664 mean_circ: 0.944361
Ran for 148550 frames Cell Events: 4681 mean_circ: 0.944344
Ran for 150050 frames Cell Events: 4735 mean_circ: 0.944316
Ran for 151050 frames Cell Events: 4765 mean_circ: 0.944385
Ran for 151550 frames Cell Events: 4776 mean_circ: 0.944371
Ran for 152550 frames Cell Events: 4811 mean_circ: 0.944374
Ran for 153050 frames Cell Events: 4826 mean_circ: 0.944335
Ran for 154050 frames Cell Events: 4858 mean_circ: 0.944365
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Ran for 156050 frames Cell Events: 4924 mean_circ: 0.944412
Ran for 157050 frames Cell Events: 4953 mean_circ: 0.944441
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Ran for 162050 frames Cell Events: 5089 mean_circ: 0.944631
Ran for 162550 frames Cell Events: 5098 mean_circ: 0.944618
Ran for 163050 frames Cell Events: 5112 mean_circ: 0.944619
Ran for 164050 frames Cell Events: 5142 mean_circ: 0.944608
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Ran for 167550 frames Cell Events: 5238 mean_circ: 0.944541
Ran for 168550 frames Cell Events: 5274 mean_circ: 0.94456
Ran for 169050 frames Cell Events: 5292 mean_circ: 0.944542
Ran for 169550 frames Cell Events: 5318 mean_circ: 0.944501
Ran for 170550 frames Cell Events: 5360 mean_circ: 0.944541
Ran for 171550 frames Cell Events: 5398 mean_circ: 0.944417
Ran for 172550 frames Cell Events: 5425 mean_circ: 0.944405
Ran for 173050 frames Cell Events: 5440 mean_circ: 0.944406
Ran for 174050 frames Cell Events: 5469 mean_circ: 0.944357
Ran for 174550 frames Cell Events: 5492 mean_circ: 0.944354
Ran for 175050 frames Cell Events: 5519 mean_circ: 0.944319
Ran for 175550 frames Cell Events: 5534 mean_circ: 0.944269
Ran for 176050 frames Cell Events: 5545 mean_circ: 0.944222
Ran for 176550 frames Cell Events: 5556 mean_circ: 0.94424
Ran for 177050 frames Cell Events: 5568 mean_circ: 0.944203
Ran for 178050 frames Cell Events: 5596 mean_circ: 0.944196
Ran for 178550 frames Cell Events: 5611 mean_circ: 0.944163
Ran for 179050 frames Cell Events: 5621 mean_circ: 0.944174
Ran for 180050 frames Cell Events: 5658 mean_circ: 0.944239
Ran for 180550 frames Cell Events: 5679 mean_circ: 0.944299
Ran for 181050 frames Cell Events: 5693 mean_circ: 0.944298
Ran for 181550 frames Cell Events: 5704 mean_circ: 0.944298
Ran for 182050 frames Cell Events: 5719 mean_circ: 0.944297
Ran for 183550 frames Cell Events: 5759 mean_circ: 0.944259
Ran for 184050 frames Cell Events: 5774 mean_circ: 0.944301
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Ran for 185050 frames Cell Events: 5811 mean_circ: 0.94432
Ran for 185550 frames Cell Events: 5826 mean_circ: 0.944337
Ran for 186050 frames Cell Events: 5839 mean_circ: 0.944364
Ran for 186550 frames Cell Events: 5849 mean_circ: 0.944351
Ran for 187050 frames Cell Events: 5865 mean_circ: 0.944342
Ran for 188550 frames Cell Events: 5899 mean_circ: 0.944333
Ran for 189050 frames Cell Events: 5913 mean_circ: 0.944369
Ran for 189550 frames Cell Events: 5922 mean_circ: 0.944393
Ran for 190050 frames Cell Events: 5933 mean_circ: 0.944416
Ran for 190550 frames Cell Events: 5938 mean_circ: 0.944417
Ran for 191550 frames Cell Events: 5969 mean_circ: 0.944457
Ran for 192550 frames Cell Events: 5997 mean_circ: 0.944503
Ran for 193050 frames Cell Events: 6010 mean_circ: 0.94451
Ran for 193550 frames Cell Events: 6023 mean_circ: 0.94452
Ran for 194050 frames Cell Events: 6036 mean_circ: 0.944554
Ran for 195050 frames Cell Events: 6056 mean_circ: 0.944552
Ran for 196550 frames Cell Events: 6096 mean_circ: 0.944538
Ran for 197050 frames Cell Events: 6106 mean_circ: 0.944538
Ran for 198050 frames Cell Events: 6130 mean_circ: 0.944526
Ran for 198550 frames Cell Events: 6142 mean_circ: 0.944521
Ran for 199050 frames Cell Events: 6157 mean_circ: 0.944537
Ran for 200550 frames Cell Events: 6210 mean_circ: 0.944564
Ran for 201050 frames Cell Events: 6228 mean_circ: 0.944588
Ran for 202050 frames Cell Events: 6254 mean_circ: 0.944563
Ran for 202550 frames Cell Events: 6272 mean_circ: 0.944575
Ran for 203050 frames Cell Events: 6291 mean_circ: 0.944554
Ran for 203550 frames Cell Events: 6317 mean_circ: 0.944526
Ran for 204050 frames Cell Events: 6331 mean_circ: 0.94455
Ran for 204550 frames Cell Events: 6338 mean_circ: 0.944539
Ran for 205050 frames Cell Events: 6347 mean_circ: 0.944522
Ran for 205550 frames Cell Events: 6356 mean_circ: 0.944515
Ran for 206050 frames Cell Events: 6370 mean_circ: 0.94453
Ran for 206550 frames Cell Events: 6386 mean_circ: 0.944507
Ran for 207050 frames Cell Events: 6398 mean_circ: 0.944513
Ran for 207550 frames Cell Events: 6407 mean_circ: 0.944498
Ran for 208050 frames Cell Events: 6414 mean_circ: 0.944468
Ran for 208550 frames Cell Events: 6421 mean_circ: 0.944474
Ran for 209550 frames Cell Events: 6453 mean_circ: 0.944448
Ran for 210550 frames Cell Events: 6488 mean_circ: 0.944458
Ran for 211050 frames Cell Events: 6503 mean_circ: 0.944495
Ran for 211550 frames Cell Events: 6531 mean_circ: 0.944519
Ran for 212050 frames Cell Events: 6542 mean_circ: 0.944533
Ran for 212550 frames Cell Events: 6553 mean_circ: 0.944564
Ran for 213050 frames Cell Events: 6569 mean_circ: 0.944573
Ran for 216050 frames Cell Events: 6679 mean_circ: 0.944596
Ran for 217050 frames Cell Events: 6722 mean_circ: 0.944595
Ran for 217550 frames Cell Events: 6741 mean_circ: 0.944629
Ran for 218050 frames Cell Events: 6757 mean_circ: 0.944636
Ran for 219050 frames Cell Events: 6796 mean_circ: 0.944662
Ran for 219550 frames Cell Events: 6813 mean_circ: 0.944698
Ran for 220050 frames Cell Events: 6829 mean_circ: 0.944672
Ran for 221550 frames Cell Events: 6885 mean_circ: 0.944649
Ran for 222050 frames Cell Events: 6899 mean_circ: 0.944667
Ran for 222550 frames Cell Events: 6910 mean_circ: 0.944691
Ran for 223550 frames Cell Events: 6943 mean_circ: 0.944585
Ran for 224550 frames Cell Events: 6967 mean_circ: 0.944608
Ran for 225050 frames Cell Events: 6983 mean_circ: 0.944603
Ran for 227050 frames Cell Events: 7053 mean_circ: 0.944531
Ran for 227550 frames Cell Events: 7069 mean_circ: 0.944532
Ran for 228050 frames Cell Events: 7080 mean_circ: 0.944535
Ran for 229050 frames Cell Events: 7094 mean_circ: 0.944562
Ran for 231050 frames Cell Events: 7163 mean_circ: 0.944601
Ran for 232550 frames Cell Events: 7212 mean_circ: 0.944611
Ran for 233550 frames Cell Events: 7252 mean_circ: 0.944619
Ran for 234050 frames Cell Events: 7264 mean_circ: 0.944628
Ran for 235050 frames Cell Events: 7300 mean_circ: 0.944666
Ran for 235550 frames Cell Events: 7319 mean_circ: 0.944666
Ran for 236550 frames Cell Events: 7344 mean_circ: 0.944723
Ran for 237050 frames Cell Events: 7363 mean_circ: 0.944701
Ran for 237550 frames Cell Events: 7383 mean_circ: 0.944694
Ran for 238050 frames Cell Events: 7405 mean_circ: 0.944686
Ran for 238550 frames Cell Events: 7423 mean_circ: 0.944704
Ran for 239050 frames Cell Events: 7443 mean_circ: 0.944721
Ran for 239550 frames Cell Events: 7451 mean_circ: 0.944748
Ran for 240050 frames Cell Events: 7462 mean_circ: 0.944765
Ran for 240550 frames Cell Events: 7475 mean_circ: 0.944715
Ran for 241050 frames Cell Events: 7491 mean_circ: 0.944722
Ran for 242550 frames Cell Events: 7528 mean_circ: 0.944681
Ran for 243050 frames Cell Events: 7541 mean_circ: 0.944674
Ran for 243550 frames Cell Events: 7551 mean_circ: 0.944699
Ran for 244550 frames Cell Events: 7572 mean_circ: 0.944735
Ran for 246050 frames Cell Events: 7618 mean_circ: 0.94476
Ran for 246550 frames Cell Events: 7636 mean_circ: 0.944778
Ran for 247550 frames Cell Events: 7679 mean_circ: 0.944815
Ran for 248050 frames Cell Events: 7688 mean_circ: 0.9448
Ran for 248550 frames Cell Events: 7701 mean_circ: 0.94481
Ran for 249050 frames Cell Events: 7713 mean_circ: 0.9448
Ran for 250050 frames Cell Events: 7745 mean_circ: 0.944788
Ran for 250550 frames Cell Events: 7763 mean_circ: 0.944824
Ran for 251550 frames Cell Events: 7788 mean_circ: 0.944855
Ran for 252050 frames Cell Events: 7801 mean_circ: 0.944879
Ran for 252550 frames Cell Events: 7811 mean_circ: 0.944885
Ran for 253550 frames Cell Events: 7843 mean_circ: 0.944883
Ran for 254050 frames Cell Events: 7857 mean_circ: 0.94488
Ran for 254550 frames Cell Events: 7864 mean_circ: 0.944881
Ran for 255050 frames Cell Events: 7879 mean_circ: 0.944896
Ran for 255550 frames Cell Events: 7889 mean_circ: 0.944901
Ran for 256050 frames Cell Events: 7909 mean_circ: 0.94489
Ran for 256550 frames Cell Events: 7928 mean_circ: 0.944894
Ran for 257050 frames Cell Events: 7942 mean_circ: 0.944933
Ran for 257550 frames Cell Events: 7952 mean_circ: 0.94493
Ran for 258050 frames Cell Events: 7968 mean_circ: 0.944964
Ran for 258550 frames Cell Events: 7979 mean_circ: 0.94496
Ran for 259050 frames Cell Events: 7993 mean_circ: 0.944949
Ran for 259550 frames Cell Events: 8004 mean_circ: 0.944934
Ran for 260050 frames Cell Events: 8030 mean_circ: 0.944946
Ran for 260550 frames Cell Events: 8046 mean_circ: 0.944949
Ran for 261050 frames Cell Events: 8060 mean_circ: 0.944959
Ran for 262050 frames Cell Events: 8090 mean_circ: 0.944984
Ran for 262550 frames Cell Events: 8110 mean_circ: 0.944988
Ran for 263550 frames Cell Events: 8136 mean_circ: 0.945003
Ran for 264050 frames Cell Events: 8146 mean_circ: 0.944989
Ran for 264550 frames Cell Events: 8152 mean_circ: 0.944997
Ran for 265050 frames Cell Events: 8158 mean_circ: 0.944996
Ran for 265550 frames Cell Events: 8173 mean_circ: 0.944995
Ran for 266050 frames Cell Events: 8193 mean_circ: 0.944989
Ran for 267050 frames Cell Events: 8223 mean_circ: 0.94498
Ran for 267550 frames Cell Events: 8236 mean_circ: 0.944949
Ran for 268050 frames Cell Events: 8248 mean_circ: 0.944961
Ran for 268550 frames Cell Events: 8257 mean_circ: 0.944971
Ran for 270050 frames Cell Events: 8313 mean_circ: 0.944958
Ran for 270550 frames Cell Events: 8327 mean_circ: 0.944935
Ran for 271050 frames Cell Events: 8337 mean_circ: 0.944957
Ran for 271550 frames Cell Events: 8349 mean_circ: 0.944963
Ran for 272050 frames Cell Events: 8363 mean_circ: 0.944965
Ran for 272550 frames Cell Events: 8379 mean_circ: 0.944987
Ran for 273050 frames Cell Events: 8394 mean_circ: 0.944966
Ran for 273550 frames Cell Events: 8408 mean_circ: 0.944969
Ran for 275050 frames Cell Events: 8448 mean_circ: 0.945008
Ran for 275550 frames Cell Events: 8460 mean_circ: 0.945029
Ran for 276050 frames Cell Events: 8481 mean_circ: 0.944986
Ran for 276550 frames Cell Events: 8499 mean_circ: 0.94496
Ran for 277050 frames Cell Events: 8518 mean_circ: 0.944961
Ran for 278050 frames Cell Events: 8538 mean_circ: 0.944958
Ran for 278550 frames Cell Events: 8555 mean_circ: 0.944954
Ran for 279050 frames Cell Events: 8572 mean_circ: 0.94495
Ran for 279550 frames Cell Events: 8584 mean_circ: 0.944938



End this measurment..



Stopping time: 2.12536e+008
****************************************
Measurement finished

Mean Circularitiy: 0.944948
Mean Area: 675.443
Mean FL-1 intensity: 5473.07
Mean FL-2 intensity: 6410.35
Mean FL-3 intensity: 0

frames processed: 279137
Total Time: 139835ms
Number of Runs (new bg img) 0
Frames collected: 279576
Skipped frames: 4077
Rescued Frames: 1044243
Samples DAQ: 69894152
Samples written: 139788046
Samples per Channel: 69894023
FPS: 1999.33

Samples per second: 499832
Expected samples/s: 500000

Events: 8584
Events per second: 61.3866
jumped back (PMT): 5792
#Frames read, frequency
# 0 frames :390541
# 1 frames :148505
# 2 frames :5935
# 3 frames :2144
# 4 frames :1242
# 5 frames :611
# 6 frames :1449
# 7 frames :1860
# 8 frames :1226
# 9 frames :839
# 10 frames :1469
# 11 frames :705
# 12 frames :624
# 13 frames :326
# 14 frames :237
# 15 frames :214
# 16 frames :240
# 17 frames :197
# 18 frames :158
# 19 frames :124
# 20 frames :95
# 21 frames :73
# 22 frames :61
# 23 frames :46
# 24 frames :29
# 25 frames :30
# 26 frames :23
# 27 frames :18
# 28 frames :19
# 29 frames :14
# 30 frames :10
# 31 frames :9
# 32 frames :16
# 33 frames :7
# 34 frames :8
# 35 frames :6
# 36 frames :2
# 37 frames :4
# 38 frames :3
# 39 frames :2
# 40 frames :2
# 41 frames :2
# 43 frames :2
# 45 frames :2
# 46 frames :1
# 48 frames :2
# 49 frames :1
# 50 frames :2
# 51 frames :1
# 52 frames :1
# 57 frames :1
# 67 frames :1
# 82 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.7926
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0