Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_14.26.49 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "6a033c30dc43f7a0217c90914a046a6b",
"name": "M1_20170608_1704_dsRNA_U5_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "12:27:15"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10001 (max 10002) in
'10001'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.3151
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.10489e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 19 mean_circ: 0.957594
Ran for 1550 frames Cell Events: 74 mean_circ: 0.942649
Ran for 2050 frames Cell Events: 93 mean_circ: 0.941455
Ran for 2550 frames Cell Events: 111 mean_circ: 0.944561
Ran for 3050 frames Cell Events: 131 mean_circ: 0.944528
Ran for 3550 frames Cell Events: 147 mean_circ: 0.946579
Ran for 4550 frames Cell Events: 179 mean_circ: 0.946897
Ran for 5550 frames Cell Events: 198 mean_circ: 0.948289
Ran for 6050 frames Cell Events: 207 mean_circ: 0.948142
Ran for 6550 frames Cell Events: 217 mean_circ: 0.947007
Ran for 8050 frames Cell Events: 280 mean_circ: 0.948019
Ran for 10050 frames Cell Events: 343 mean_circ: 0.946988
Ran for 10550 frames Cell Events: 359 mean_circ: 0.947082
Ran for 11050 frames Cell Events: 374 mean_circ: 0.947128
Ran for 12050 frames Cell Events: 411 mean_circ: 0.946776
Ran for 12550 frames Cell Events: 429 mean_circ: 0.946887
Ran for 13550 frames Cell Events: 458 mean_circ: 0.946799
Ran for 14550 frames Cell Events: 486 mean_circ: 0.946397
Ran for 16050 frames Cell Events: 537 mean_circ: 0.94643
Ran for 19050 frames Cell Events: 629 mean_circ: 0.946205
Ran for 19550 frames Cell Events: 654 mean_circ: 0.946428
Ran for 20050 frames Cell Events: 672 mean_circ: 0.946756
Ran for 20550 frames Cell Events: 681 mean_circ: 0.946364
Ran for 21550 frames Cell Events: 703 mean_circ: 0.946398
Ran for 22050 frames Cell Events: 720 mean_circ: 0.946548
Ran for 23550 frames Cell Events: 764 mean_circ: 0.946577
Ran for 24050 frames Cell Events: 778 mean_circ: 0.94665
Ran for 24550 frames Cell Events: 791 mean_circ: 0.946747
Ran for 25050 frames Cell Events: 805 mean_circ: 0.946185
Ran for 25550 frames Cell Events: 818 mean_circ: 0.946268
Ran for 26050 frames Cell Events: 833 mean_circ: 0.94635
Ran for 27050 frames Cell Events: 860 mean_circ: 0.946542
Ran for 28050 frames Cell Events: 890 mean_circ: 0.946416
Ran for 28550 frames Cell Events: 910 mean_circ: 0.946455
Ran for 29050 frames Cell Events: 930 mean_circ: 0.946522
Ran for 29550 frames Cell Events: 953 mean_circ: 0.946182
Ran for 30550 frames Cell Events: 989 mean_circ: 0.946303
Ran for 31050 frames Cell Events: 998 mean_circ: 0.946425
Ran for 31550 frames Cell Events: 1011 mean_circ: 0.946531
Ran for 32550 frames Cell Events: 1055 mean_circ: 0.946507
Ran for 33050 frames Cell Events: 1079 mean_circ: 0.946488
Ran for 34050 frames Cell Events: 1111 mean_circ: 0.946732
Ran for 36050 frames Cell Events: 1186 mean_circ: 0.946582
Ran for 36550 frames Cell Events: 1196 mean_circ: 0.946727
Ran for 37050 frames Cell Events: 1210 mean_circ: 0.946863
Ran for 38050 frames Cell Events: 1240 mean_circ: 0.946727
Ran for 38550 frames Cell Events: 1250 mean_circ: 0.946745
Ran for 39050 frames Cell Events: 1276 mean_circ: 0.946828
Ran for 39550 frames Cell Events: 1294 mean_circ: 0.946946
Ran for 40050 frames Cell Events: 1311 mean_circ: 0.946847
Ran for 40550 frames Cell Events: 1331 mean_circ: 0.946658
Ran for 41050 frames Cell Events: 1343 mean_circ: 0.946641
Ran for 43050 frames Cell Events: 1415 mean_circ: 0.946639
Ran for 44550 frames Cell Events: 1460 mean_circ: 0.946501
Ran for 45050 frames Cell Events: 1479 mean_circ: 0.946435
Ran for 45550 frames Cell Events: 1494 mean_circ: 0.946497
Ran for 46050 frames Cell Events: 1504 mean_circ: 0.946406
Ran for 47050 frames Cell Events: 1533 mean_circ: 0.946422
Ran for 47550 frames Cell Events: 1549 mean_circ: 0.946406
Ran for 49050 frames Cell Events: 1592 mean_circ: 0.946431
Ran for 49550 frames Cell Events: 1611 mean_circ: 0.946478
Ran for 51050 frames Cell Events: 1663 mean_circ: 0.946832
Ran for 51550 frames Cell Events: 1672 mean_circ: 0.946809
Ran for 52050 frames Cell Events: 1685 mean_circ: 0.946767
Ran for 52550 frames Cell Events: 1706 mean_circ: 0.946755
Ran for 53550 frames Cell Events: 1739 mean_circ: 0.946781
Ran for 54050 frames Cell Events: 1756 mean_circ: 0.946798
Ran for 55050 frames Cell Events: 1809 mean_circ: 0.946742
Ran for 56050 frames Cell Events: 1844 mean_circ: 0.946828
Ran for 56550 frames Cell Events: 1856 mean_circ: 0.946849
Ran for 57050 frames Cell Events: 1871 mean_circ: 0.946729
Ran for 59550 frames Cell Events: 1978 mean_circ: 0.947043
Ran for 60050 frames Cell Events: 1995 mean_circ: 0.947042
Ran for 61550 frames Cell Events: 2039 mean_circ: 0.947163
Ran for 62050 frames Cell Events: 2052 mean_circ: 0.947166
Ran for 62550 frames Cell Events: 2069 mean_circ: 0.947189
Ran for 63050 frames Cell Events: 2093 mean_circ: 0.94719
Ran for 64550 frames Cell Events: 2147 mean_circ: 0.947007
Ran for 65050 frames Cell Events: 2163 mean_circ: 0.947053
Ran for 65550 frames Cell Events: 2174 mean_circ: 0.947005
Ran for 66550 frames Cell Events: 2230 mean_circ: 0.94713
Ran for 67050 frames Cell Events: 2244 mean_circ: 0.947131
Ran for 68550 frames Cell Events: 2294 mean_circ: 0.946961
Ran for 69050 frames Cell Events: 2314 mean_circ: 0.946968
Ran for 71050 frames Cell Events: 2389 mean_circ: 0.947126
Ran for 72050 frames Cell Events: 2423 mean_circ: 0.947109
Ran for 74050 frames Cell Events: 2482 mean_circ: 0.947018
Ran for 75050 frames Cell Events: 2518 mean_circ: 0.946949
Ran for 75550 frames Cell Events: 2535 mean_circ: 0.946958
Ran for 76550 frames Cell Events: 2589 mean_circ: 0.947015
Ran for 77050 frames Cell Events: 2600 mean_circ: 0.946984
Ran for 77550 frames Cell Events: 2619 mean_circ: 0.947036
Ran for 78050 frames Cell Events: 2636 mean_circ: 0.946954
Ran for 78550 frames Cell Events: 2653 mean_circ: 0.946973
Ran for 79550 frames Cell Events: 2690 mean_circ: 0.947145
Ran for 80050 frames Cell Events: 2704 mean_circ: 0.947161
Ran for 80550 frames Cell Events: 2723 mean_circ: 0.947221
Ran for 81050 frames Cell Events: 2741 mean_circ: 0.947246
Ran for 83550 frames Cell Events: 2820 mean_circ: 0.947351
Ran for 84550 frames Cell Events: 2844 mean_circ: 0.947356
Ran for 87550 frames Cell Events: 2947 mean_circ: 0.947418
Ran for 88050 frames Cell Events: 2966 mean_circ: 0.947485
Ran for 88550 frames Cell Events: 2986 mean_circ: 0.947409
Ran for 89550 frames Cell Events: 3027 mean_circ: 0.947402
Ran for 90050 frames Cell Events: 3045 mean_circ: 0.947413
Ran for 90550 frames Cell Events: 3060 mean_circ: 0.947428
Ran for 91050 frames Cell Events: 3073 mean_circ: 0.947335
Ran for 91550 frames Cell Events: 3091 mean_circ: 0.94735
Ran for 92050 frames Cell Events: 3102 mean_circ: 0.947344
Ran for 94050 frames Cell Events: 3165 mean_circ: 0.947374
Ran for 95050 frames Cell Events: 3194 mean_circ: 0.947432
Ran for 95550 frames Cell Events: 3213 mean_circ: 0.947441
Ran for 96550 frames Cell Events: 3252 mean_circ: 0.94755
Ran for 98050 frames Cell Events: 3297 mean_circ: 0.947556
Ran for 99050 frames Cell Events: 3331 mean_circ: 0.947629
Ran for 100050 frames Cell Events: 3375 mean_circ: 0.947593
Ran for 100550 frames Cell Events: 3387 mean_circ: 0.94758
Ran for 101050 frames Cell Events: 3404 mean_circ: 0.947485
Ran for 102050 frames Cell Events: 3437 mean_circ: 0.947474
Ran for 102550 frames Cell Events: 3449 mean_circ: 0.947487
Ran for 104050 frames Cell Events: 3505 mean_circ: 0.94743
Ran for 104550 frames Cell Events: 3523 mean_circ: 0.947495
Ran for 105550 frames Cell Events: 3558 mean_circ: 0.947408
Ran for 106050 frames Cell Events: 3575 mean_circ: 0.947431
Ran for 106550 frames Cell Events: 3592 mean_circ: 0.947408
Ran for 107550 frames Cell Events: 3629 mean_circ: 0.947403
Ran for 108550 frames Cell Events: 3656 mean_circ: 0.947407
Ran for 109050 frames Cell Events: 3678 mean_circ: 0.947415
Ran for 109550 frames Cell Events: 3696 mean_circ: 0.947448
Ran for 110550 frames Cell Events: 3732 mean_circ: 0.947463
Ran for 111550 frames Cell Events: 3783 mean_circ: 0.947448
Ran for 112050 frames Cell Events: 3803 mean_circ: 0.947484
Ran for 112550 frames Cell Events: 3821 mean_circ: 0.94747
Ran for 113050 frames Cell Events: 3844 mean_circ: 0.947531
Ran for 113550 frames Cell Events: 3863 mean_circ: 0.947572
Ran for 114050 frames Cell Events: 3877 mean_circ: 0.947601
Ran for 114550 frames Cell Events: 3894 mean_circ: 0.947632
Ran for 115050 frames Cell Events: 3912 mean_circ: 0.947613
Ran for 115550 frames Cell Events: 3920 mean_circ: 0.947595
Ran for 118050 frames Cell Events: 4019 mean_circ: 0.947597
Ran for 119050 frames Cell Events: 4060 mean_circ: 0.947632
Ran for 120550 frames Cell Events: 4121 mean_circ: 0.947572
Ran for 121050 frames Cell Events: 4140 mean_circ: 0.947628
Ran for 121550 frames Cell Events: 4150 mean_circ: 0.947602
Ran for 124050 frames Cell Events: 4258 mean_circ: 0.947752
Ran for 125050 frames Cell Events: 4286 mean_circ: 0.947826
Ran for 125550 frames Cell Events: 4304 mean_circ: 0.947704
Ran for 126050 frames Cell Events: 4313 mean_circ: 0.947691
Ran for 126550 frames Cell Events: 4330 mean_circ: 0.947705
Ran for 127550 frames Cell Events: 4359 mean_circ: 0.947751
Ran for 128550 frames Cell Events: 4382 mean_circ: 0.947798
Ran for 130050 frames Cell Events: 4428 mean_circ: 0.947809
Ran for 131050 frames Cell Events: 4463 mean_circ: 0.947863
Ran for 132050 frames Cell Events: 4497 mean_circ: 0.947848
Ran for 134550 frames Cell Events: 4609 mean_circ: 0.947822
Ran for 135050 frames Cell Events: 4628 mean_circ: 0.947786
Ran for 138050 frames Cell Events: 4739 mean_circ: 0.947931
Ran for 139050 frames Cell Events: 4771 mean_circ: 0.947964
Ran for 139550 frames Cell Events: 4792 mean_circ: 0.94798
Ran for 140050 frames Cell Events: 4807 mean_circ: 0.947958
Ran for 141050 frames Cell Events: 4849 mean_circ: 0.948001
Ran for 141550 frames Cell Events: 4865 mean_circ: 0.948025
Ran for 143050 frames Cell Events: 4926 mean_circ: 0.9481
Ran for 143550 frames Cell Events: 4951 mean_circ: 0.948113
Ran for 145050 frames Cell Events: 4992 mean_circ: 0.948209
Ran for 145550 frames Cell Events: 5009 mean_circ: 0.948228
Ran for 146050 frames Cell Events: 5031 mean_circ: 0.948225
Ran for 146550 frames Cell Events: 5054 mean_circ: 0.948239
Ran for 147050 frames Cell Events: 5075 mean_circ: 0.94823
Ran for 147550 frames Cell Events: 5095 mean_circ: 0.948234
Ran for 148050 frames Cell Events: 5116 mean_circ: 0.948225
Ran for 149050 frames Cell Events: 5157 mean_circ: 0.948124
Ran for 150050 frames Cell Events: 5196 mean_circ: 0.948076
Ran for 151550 frames Cell Events: 5274 mean_circ: 0.948063
Ran for 152050 frames Cell Events: 5287 mean_circ: 0.948011
Ran for 152550 frames Cell Events: 5308 mean_circ: 0.948006
Ran for 154050 frames Cell Events: 5372 mean_circ: 0.947949
Ran for 155050 frames Cell Events: 5429 mean_circ: 0.947876
Ran for 155550 frames Cell Events: 5443 mean_circ: 0.947867
Ran for 156550 frames Cell Events: 5486 mean_circ: 0.947952
Ran for 157050 frames Cell Events: 5501 mean_circ: 0.947961
Ran for 158050 frames Cell Events: 5538 mean_circ: 0.94796
Ran for 158550 frames Cell Events: 5555 mean_circ: 0.947916
Ran for 160050 frames Cell Events: 5610 mean_circ: 0.947929
Ran for 160550 frames Cell Events: 5631 mean_circ: 0.947942
Ran for 161050 frames Cell Events: 5656 mean_circ: 0.947946
Ran for 162050 frames Cell Events: 5698 mean_circ: 0.94792
Ran for 162550 frames Cell Events: 5710 mean_circ: 0.947975
Ran for 164050 frames Cell Events: 5775 mean_circ: 0.947935
Ran for 165550 frames Cell Events: 5839 mean_circ: 0.947936
Ran for 167050 frames Cell Events: 5886 mean_circ: 0.947889
Ran for 168050 frames Cell Events: 5937 mean_circ: 0.947829
Ran for 169050 frames Cell Events: 5967 mean_circ: 0.947828
Ran for 169550 frames Cell Events: 5991 mean_circ: 0.947844
Ran for 170050 frames Cell Events: 6018 mean_circ: 0.947849
Ran for 170550 frames Cell Events: 6037 mean_circ: 0.947828
Ran for 171050 frames Cell Events: 6058 mean_circ: 0.947842
Ran for 171550 frames Cell Events: 6073 mean_circ: 0.94788
Ran for 172050 frames Cell Events: 6093 mean_circ: 0.947882
Ran for 173050 frames Cell Events: 6134 mean_circ: 0.947941
Ran for 175550 frames Cell Events: 6236 mean_circ: 0.948052
Ran for 176550 frames Cell Events: 6281 mean_circ: 0.948067
Ran for 177050 frames Cell Events: 6298 mean_circ: 0.948044
Ran for 178550 frames Cell Events: 6342 mean_circ: 0.948018
Ran for 180550 frames Cell Events: 6453 mean_circ: 0.948114
Ran for 181050 frames Cell Events: 6471 mean_circ: 0.948099
Ran for 182550 frames Cell Events: 6535 mean_circ: 0.948086
Ran for 184050 frames Cell Events: 6603 mean_circ: 0.948087
Ran for 184550 frames Cell Events: 6634 mean_circ: 0.948097
Ran for 185050 frames Cell Events: 6661 mean_circ: 0.948057
Ran for 185550 frames Cell Events: 6676 mean_circ: 0.947998
Ran for 187050 frames Cell Events: 6742 mean_circ: 0.947976
Ran for 188050 frames Cell Events: 6778 mean_circ: 0.947935
Ran for 189050 frames Cell Events: 6815 mean_circ: 0.947905
Ran for 189550 frames Cell Events: 6840 mean_circ: 0.947904
Ran for 190050 frames Cell Events: 6863 mean_circ: 0.947953
Ran for 191050 frames Cell Events: 6905 mean_circ: 0.947978
Ran for 191550 frames Cell Events: 6931 mean_circ: 0.947985
Ran for 192050 frames Cell Events: 6946 mean_circ: 0.947984
Ran for 192550 frames Cell Events: 6968 mean_circ: 0.948015
Ran for 193550 frames Cell Events: 6999 mean_circ: 0.948014
Ran for 194050 frames Cell Events: 7015 mean_circ: 0.948009
Ran for 195050 frames Cell Events: 7050 mean_circ: 0.948027
Ran for 195550 frames Cell Events: 7078 mean_circ: 0.948022
Ran for 196550 frames Cell Events: 7118 mean_circ: 0.948022
Ran for 197550 frames Cell Events: 7162 mean_circ: 0.948017
Ran for 198550 frames Cell Events: 7193 mean_circ: 0.948007
Ran for 199550 frames Cell Events: 7246 mean_circ: 0.947959
Ran for 200050 frames Cell Events: 7265 mean_circ: 0.947951
Ran for 200550 frames Cell Events: 7279 mean_circ: 0.947943
Ran for 203050 frames Cell Events: 7394 mean_circ: 0.948038
Ran for 204550 frames Cell Events: 7461 mean_circ: 0.948044
Ran for 205050 frames Cell Events: 7483 mean_circ: 0.948029
Ran for 205550 frames Cell Events: 7503 mean_circ: 0.948033
Ran for 206550 frames Cell Events: 7545 mean_circ: 0.948079
Ran for 207050 frames Cell Events: 7559 mean_circ: 0.948069
Ran for 207550 frames Cell Events: 7572 mean_circ: 0.948062
Ran for 210050 frames Cell Events: 7683 mean_circ: 0.948112
Ran for 211050 frames Cell Events: 7728 mean_circ: 0.948123
Ran for 211550 frames Cell Events: 7749 mean_circ: 0.948132
Ran for 212050 frames Cell Events: 7764 mean_circ: 0.948141
Ran for 212550 frames Cell Events: 7778 mean_circ: 0.948149
Ran for 213050 frames Cell Events: 7798 mean_circ: 0.948151
Ran for 213550 frames Cell Events: 7815 mean_circ: 0.948193
Ran for 214550 frames Cell Events: 7842 mean_circ: 0.948223
Ran for 215050 frames Cell Events: 7870 mean_circ: 0.948228
Ran for 218550 frames Cell Events: 7994 mean_circ: 0.948215
Ran for 219050 frames Cell Events: 8023 mean_circ: 0.948224
Ran for 219550 frames Cell Events: 8046 mean_circ: 0.948234
Ran for 220050 frames Cell Events: 8064 mean_circ: 0.948212
Ran for 220550 frames Cell Events: 8077 mean_circ: 0.948244
Ran for 221050 frames Cell Events: 8089 mean_circ: 0.948229
Ran for 221550 frames Cell Events: 8111 mean_circ: 0.948238
Ran for 222050 frames Cell Events: 8130 mean_circ: 0.948243
Ran for 222550 frames Cell Events: 8143 mean_circ: 0.948235
Ran for 223550 frames Cell Events: 8204 mean_circ: 0.948262
Ran for 224550 frames Cell Events: 8234 mean_circ: 0.948238
Ran for 225550 frames Cell Events: 8267 mean_circ: 0.948199
Ran for 226050 frames Cell Events: 8278 mean_circ: 0.948213
Ran for 227050 frames Cell Events: 8321 mean_circ: 0.948222
Ran for 227550 frames Cell Events: 8340 mean_circ: 0.948242
Ran for 228050 frames Cell Events: 8359 mean_circ: 0.94823
Ran for 228550 frames Cell Events: 8382 mean_circ: 0.948209
Ran for 229050 frames Cell Events: 8406 mean_circ: 0.948227
Ran for 229550 frames Cell Events: 8424 mean_circ: 0.948231
Ran for 230050 frames Cell Events: 8450 mean_circ: 0.948233
Ran for 230550 frames Cell Events: 8468 mean_circ: 0.948251
Ran for 231050 frames Cell Events: 8478 mean_circ: 0.948245
Ran for 231550 frames Cell Events: 8487 mean_circ: 0.948252
Ran for 234550 frames Cell Events: 8603 mean_circ: 0.948215
Ran for 235050 frames Cell Events: 8622 mean_circ: 0.948253
Ran for 235550 frames Cell Events: 8635 mean_circ: 0.948268
Ran for 237050 frames Cell Events: 8694 mean_circ: 0.948296
Ran for 238550 frames Cell Events: 8771 mean_circ: 0.948242
Ran for 239550 frames Cell Events: 8802 mean_circ: 0.948221
Ran for 240050 frames Cell Events: 8826 mean_circ: 0.9482
Ran for 240550 frames Cell Events: 8852 mean_circ: 0.948188
Ran for 241050 frames Cell Events: 8869 mean_circ: 0.948213
Ran for 241550 frames Cell Events: 8883 mean_circ: 0.948207
Ran for 242050 frames Cell Events: 8899 mean_circ: 0.948193
Ran for 243050 frames Cell Events: 8951 mean_circ: 0.948188
Ran for 244050 frames Cell Events: 8997 mean_circ: 0.948137
Ran for 244550 frames Cell Events: 9007 mean_circ: 0.948131
Ran for 245550 frames Cell Events: 9058 mean_circ: 0.948152
Ran for 246050 frames Cell Events: 9091 mean_circ: 0.948134
Ran for 246550 frames Cell Events: 9116 mean_circ: 0.948129
Ran for 247550 frames Cell Events: 9165 mean_circ: 0.948113
Ran for 249550 frames Cell Events: 9239 mean_circ: 0.948062
Ran for 251550 frames Cell Events: 9317 mean_circ: 0.948039
Ran for 254050 frames Cell Events: 9424 mean_circ: 0.948056
Ran for 254550 frames Cell Events: 9451 mean_circ: 0.94804
Ran for 256050 frames Cell Events: 9495 mean_circ: 0.94802
Ran for 259550 frames Cell Events: 9662 mean_circ: 0.948003
Ran for 260050 frames Cell Events: 9684 mean_circ: 0.947995
Ran for 260550 frames Cell Events: 9706 mean_circ: 0.948008
Ran for 261050 frames Cell Events: 9728 mean_circ: 0.948022
Ran for 261550 frames Cell Events: 9739 mean_circ: 0.948015
Ran for 262050 frames Cell Events: 9754 mean_circ: 0.948013
Ran for 262550 frames Cell Events: 9775 mean_circ: 0.948
Ran for 263550 frames Cell Events: 9806 mean_circ: 0.948002
Ran for 264050 frames Cell Events: 9824 mean_circ: 0.948013
Ran for 264550 frames Cell Events: 9847 mean_circ: 0.948022
Ran for 265550 frames Cell Events: 9892 mean_circ: 0.948016
Ran for 266050 frames Cell Events: 9910 mean_circ: 0.948015
Ran for 267550 frames Cell Events: 9987 mean_circ: 0.94804



End this measurment.
because stop condition (time/nr of cells) was met

Stopping time: 2.10503e+009
****************************************
Measurement finished

Mean Circularitiy: 0.948049
Mean Area: 646.31
Mean FL-1 intensity: 4263.93
Mean FL-2 intensity: 5229.49
Mean FL-3 intensity: 0

frames processed: 267479
Total Time: 134056ms
Number of Runs (new bg img) 0
Frames collected: 267986
Skipped frames: 36255
Rescued Frames: 2866621
Samples DAQ: 66996454
Samples written: 133992762
Samples per Channel: 66996381
FPS: 1999.05

Samples per second: 499762
Expected samples/s: 500000

Events: 10002
Events per second: 74.6103
jumped back (PMT): 4938
#Frames read, frequency
# 0 frames :398558
# 1 frames :116876
# 2 frames :5027
# 3 frames :2382
# 4 frames :1254
# 5 frames :709
# 6 frames :1097
# 7 frames :1929
# 8 frames :1470
# 9 frames :996
# 10 frames :884
# 11 frames :870
# 12 frames :851
# 13 frames :541
# 14 frames :380
# 15 frames :280
# 16 frames :269
# 17 frames :208
# 18 frames :206
# 19 frames :174
# 20 frames :148
# 21 frames :142
# 22 frames :110
# 23 frames :91
# 24 frames :78
# 25 frames :68
# 26 frames :43
# 27 frames :35
# 28 frames :27
# 29 frames :28
# 30 frames :23
# 31 frames :18
# 32 frames :21
# 33 frames :13
# 34 frames :15
# 35 frames :14
# 36 frames :10
# 37 frames :9
# 38 frames :8
# 39 frames :3
# 40 frames :7
# 41 frames :6
# 42 frames :4
# 43 frames :7
# 44 frames :1
# 45 frames :5
# 46 frames :3
# 47 frames :4
# 48 frames :3
# 49 frames :1
# 50 frames :2
# 51 frames :1
# 53 frames :1
# 54 frames :1
# 55 frames :2
# 57 frames :1
# 59 frames :1
# 60 frames :1
# 63 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.3151
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0