Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_19.13.58 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "f7a924ca2bec8d468de3fc8172619d78",
"name": "M1_20170619_1445_dsRNA_U8_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "17:14:19"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8522 (max 8524) in '8522'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.9567
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 4.73661e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 16 mean_circ: 0.831055
Ran for 1050 frames Cell Events: 42 mean_circ: 0.924053
Ran for 2050 frames Cell Events: 86 mean_circ: 0.935926
Ran for 2550 frames Cell Events: 100 mean_circ: 0.938605
Ran for 3050 frames Cell Events: 113 mean_circ: 0.940441
Ran for 3550 frames Cell Events: 124 mean_circ: 0.940119
Ran for 4050 frames Cell Events: 142 mean_circ: 0.940603
Ran for 4550 frames Cell Events: 152 mean_circ: 0.940917
Ran for 5050 frames Cell Events: 178 mean_circ: 0.940991
Ran for 5550 frames Cell Events: 198 mean_circ: 0.941074
Ran for 6050 frames Cell Events: 216 mean_circ: 0.941571
Ran for 6550 frames Cell Events: 234 mean_circ: 0.941786
Ran for 7050 frames Cell Events: 248 mean_circ: 0.941869
Ran for 7550 frames Cell Events: 261 mean_circ: 0.94282
Ran for 8050 frames Cell Events: 283 mean_circ: 0.94422
Ran for 8550 frames Cell Events: 295 mean_circ: 0.944899
Ran for 10050 frames Cell Events: 357 mean_circ: 0.945876
Ran for 10550 frames Cell Events: 371 mean_circ: 0.946066
Ran for 11050 frames Cell Events: 390 mean_circ: 0.945981
Ran for 11550 frames Cell Events: 407 mean_circ: 0.94602
Ran for 12050 frames Cell Events: 425 mean_circ: 0.946214
Ran for 12550 frames Cell Events: 436 mean_circ: 0.946542
Ran for 13050 frames Cell Events: 459 mean_circ: 0.946254
Ran for 13550 frames Cell Events: 469 mean_circ: 0.946232
Ran for 14050 frames Cell Events: 486 mean_circ: 0.946579
Ran for 14550 frames Cell Events: 503 mean_circ: 0.946537
Ran for 15050 frames Cell Events: 525 mean_circ: 0.946809
Ran for 15550 frames Cell Events: 537 mean_circ: 0.946438
Ran for 16550 frames Cell Events: 583 mean_circ: 0.946881
Ran for 17050 frames Cell Events: 600 mean_circ: 0.946873
Ran for 17550 frames Cell Events: 618 mean_circ: 0.946475
Ran for 18050 frames Cell Events: 639 mean_circ: 0.946631
Ran for 18550 frames Cell Events: 658 mean_circ: 0.946426
Ran for 20550 frames Cell Events: 736 mean_circ: 0.946787
Ran for 21550 frames Cell Events: 768 mean_circ: 0.947019
Ran for 22050 frames Cell Events: 786 mean_circ: 0.947246
Ran for 23050 frames Cell Events: 820 mean_circ: 0.947193
Ran for 23550 frames Cell Events: 840 mean_circ: 0.947352
Ran for 24050 frames Cell Events: 853 mean_circ: 0.947276
Ran for 24550 frames Cell Events: 871 mean_circ: 0.947043
Ran for 25050 frames Cell Events: 892 mean_circ: 0.947214
Ran for 25550 frames Cell Events: 900 mean_circ: 0.947292
Ran for 26050 frames Cell Events: 926 mean_circ: 0.947242
Ran for 26550 frames Cell Events: 948 mean_circ: 0.946982
Ran for 27050 frames Cell Events: 972 mean_circ: 0.946959
Ran for 27550 frames Cell Events: 991 mean_circ: 0.946931
Ran for 28050 frames Cell Events: 1003 mean_circ: 0.946928
Ran for 28550 frames Cell Events: 1019 mean_circ: 0.94682
Ran for 30050 frames Cell Events: 1077 mean_circ: 0.947074
Ran for 30550 frames Cell Events: 1104 mean_circ: 0.947048
Ran for 31550 frames Cell Events: 1144 mean_circ: 0.947053
Ran for 32550 frames Cell Events: 1187 mean_circ: 0.947058
Ran for 33050 frames Cell Events: 1203 mean_circ: 0.946937
Ran for 33550 frames Cell Events: 1224 mean_circ: 0.947009
Ran for 34050 frames Cell Events: 1245 mean_circ: 0.94688
Ran for 34550 frames Cell Events: 1268 mean_circ: 0.946832
Ran for 35550 frames Cell Events: 1304 mean_circ: 0.946921
Ran for 36050 frames Cell Events: 1329 mean_circ: 0.947106
Ran for 36550 frames Cell Events: 1351 mean_circ: 0.946915
Ran for 37050 frames Cell Events: 1371 mean_circ: 0.947065
Ran for 37550 frames Cell Events: 1382 mean_circ: 0.947
Ran for 39050 frames Cell Events: 1432 mean_circ: 0.946967
Ran for 39550 frames Cell Events: 1449 mean_circ: 0.946998
Ran for 40050 frames Cell Events: 1458 mean_circ: 0.947054
Ran for 40550 frames Cell Events: 1477 mean_circ: 0.947097
Ran for 41050 frames Cell Events: 1499 mean_circ: 0.947017
Ran for 41550 frames Cell Events: 1523 mean_circ: 0.947048
Ran for 42550 frames Cell Events: 1560 mean_circ: 0.946568
Ran for 43550 frames Cell Events: 1611 mean_circ: 0.946833
Ran for 44050 frames Cell Events: 1627 mean_circ: 0.946988
Ran for 44550 frames Cell Events: 1637 mean_circ: 0.947029
Ran for 45050 frames Cell Events: 1655 mean_circ: 0.947046
Ran for 45550 frames Cell Events: 1670 mean_circ: 0.947118
Ran for 46050 frames Cell Events: 1687 mean_circ: 0.947336
Ran for 47050 frames Cell Events: 1733 mean_circ: 0.947163
Ran for 47550 frames Cell Events: 1757 mean_circ: 0.947011
Ran for 48050 frames Cell Events: 1769 mean_circ: 0.947164
Ran for 48550 frames Cell Events: 1793 mean_circ: 0.947274
Ran for 49050 frames Cell Events: 1804 mean_circ: 0.947148
Ran for 49550 frames Cell Events: 1826 mean_circ: 0.947218
Ran for 50550 frames Cell Events: 1871 mean_circ: 0.947274
Ran for 51050 frames Cell Events: 1906 mean_circ: 0.947185
Ran for 51550 frames Cell Events: 1920 mean_circ: 0.947242
Ran for 52550 frames Cell Events: 1959 mean_circ: 0.947298
Ran for 54050 frames Cell Events: 2017 mean_circ: 0.947018
Ran for 54550 frames Cell Events: 2031 mean_circ: 0.946989
Ran for 56550 frames Cell Events: 2120 mean_circ: 0.946979
Ran for 57050 frames Cell Events: 2139 mean_circ: 0.947074
Ran for 57550 frames Cell Events: 2155 mean_circ: 0.946991
Ran for 58050 frames Cell Events: 2180 mean_circ: 0.947046
Ran for 58550 frames Cell Events: 2203 mean_circ: 0.947083
Ran for 59550 frames Cell Events: 2240 mean_circ: 0.947114
Ran for 60050 frames Cell Events: 2257 mean_circ: 0.947047
Ran for 60550 frames Cell Events: 2270 mean_circ: 0.947059
Ran for 62050 frames Cell Events: 2329 mean_circ: 0.947144
Ran for 62550 frames Cell Events: 2354 mean_circ: 0.947177
Ran for 63050 frames Cell Events: 2371 mean_circ: 0.947278
Ran for 63550 frames Cell Events: 2396 mean_circ: 0.947348
Ran for 64050 frames Cell Events: 2427 mean_circ: 0.94737
Ran for 64550 frames Cell Events: 2455 mean_circ: 0.947377
Ran for 65550 frames Cell Events: 2514 mean_circ: 0.947329
Ran for 66050 frames Cell Events: 2538 mean_circ: 0.947443
Ran for 66550 frames Cell Events: 2558 mean_circ: 0.947478
Ran for 67550 frames Cell Events: 2589 mean_circ: 0.947438
Ran for 68050 frames Cell Events: 2616 mean_circ: 0.947497
Ran for 70050 frames Cell Events: 2715 mean_circ: 0.947451
Ran for 70550 frames Cell Events: 2733 mean_circ: 0.947461
Ran for 71050 frames Cell Events: 2751 mean_circ: 0.947529
Ran for 72050 frames Cell Events: 2798 mean_circ: 0.947747
Ran for 72550 frames Cell Events: 2809 mean_circ: 0.947807
Ran for 73050 frames Cell Events: 2829 mean_circ: 0.947863
Ran for 73550 frames Cell Events: 2839 mean_circ: 0.947833
Ran for 74050 frames Cell Events: 2852 mean_circ: 0.947776
Ran for 74550 frames Cell Events: 2859 mean_circ: 0.947802
Ran for 75050 frames Cell Events: 2888 mean_circ: 0.947876
Ran for 75550 frames Cell Events: 2905 mean_circ: 0.947724
Ran for 76050 frames Cell Events: 2927 mean_circ: 0.947715
Ran for 76550 frames Cell Events: 2945 mean_circ: 0.947839
Ran for 77050 frames Cell Events: 2959 mean_circ: 0.947929
Ran for 77550 frames Cell Events: 2977 mean_circ: 0.947973
Ran for 78050 frames Cell Events: 2992 mean_circ: 0.947989
Ran for 79050 frames Cell Events: 3040 mean_circ: 0.94802
Ran for 79550 frames Cell Events: 3056 mean_circ: 0.947935
Ran for 80550 frames Cell Events: 3092 mean_circ: 0.948014
Ran for 81050 frames Cell Events: 3110 mean_circ: 0.947998
Ran for 81550 frames Cell Events: 3128 mean_circ: 0.948051
Ran for 82050 frames Cell Events: 3148 mean_circ: 0.94805
Ran for 82550 frames Cell Events: 3162 mean_circ: 0.948058
Ran for 83050 frames Cell Events: 3180 mean_circ: 0.947979
Ran for 84050 frames Cell Events: 3213 mean_circ: 0.948007
Ran for 84550 frames Cell Events: 3232 mean_circ: 0.947981
Ran for 85050 frames Cell Events: 3252 mean_circ: 0.948014
Ran for 85550 frames Cell Events: 3288 mean_circ: 0.948178
Ran for 86050 frames Cell Events: 3312 mean_circ: 0.948176
Ran for 86550 frames Cell Events: 3335 mean_circ: 0.948214
Ran for 87050 frames Cell Events: 3360 mean_circ: 0.948185
Ran for 87550 frames Cell Events: 3379 mean_circ: 0.948221
Ran for 88050 frames Cell Events: 3412 mean_circ: 0.948243
Ran for 88550 frames Cell Events: 3430 mean_circ: 0.948262
Ran for 89050 frames Cell Events: 3443 mean_circ: 0.948297
Ran for 90050 frames Cell Events: 3497 mean_circ: 0.948372
Ran for 90550 frames Cell Events: 3523 mean_circ: 0.948237
Ran for 91050 frames Cell Events: 3538 mean_circ: 0.948273
Ran for 91550 frames Cell Events: 3557 mean_circ: 0.948243
Ran for 92050 frames Cell Events: 3572 mean_circ: 0.948217
Ran for 92550 frames Cell Events: 3595 mean_circ: 0.948153
Ran for 93550 frames Cell Events: 3634 mean_circ: 0.94816
Ran for 94050 frames Cell Events: 3648 mean_circ: 0.948149
Ran for 95050 frames Cell Events: 3685 mean_circ: 0.948133
Ran for 97050 frames Cell Events: 3784 mean_circ: 0.948228
Ran for 97550 frames Cell Events: 3797 mean_circ: 0.948253
Ran for 98550 frames Cell Events: 3845 mean_circ: 0.948346
Ran for 99050 frames Cell Events: 3867 mean_circ: 0.948301
Ran for 100050 frames Cell Events: 3898 mean_circ: 0.948266
Ran for 101050 frames Cell Events: 3942 mean_circ: 0.948321
Ran for 102050 frames Cell Events: 3981 mean_circ: 0.948394
Ran for 102550 frames Cell Events: 4004 mean_circ: 0.948371
Ran for 103050 frames Cell Events: 4027 mean_circ: 0.948431
Ran for 104550 frames Cell Events: 4084 mean_circ: 0.948492
Ran for 105050 frames Cell Events: 4106 mean_circ: 0.948526
Ran for 106550 frames Cell Events: 4171 mean_circ: 0.948501
Ran for 107050 frames Cell Events: 4190 mean_circ: 0.9485
Ran for 107550 frames Cell Events: 4209 mean_circ: 0.948529
Ran for 108050 frames Cell Events: 4234 mean_circ: 0.948586
Ran for 108550 frames Cell Events: 4257 mean_circ: 0.948641
Ran for 109050 frames Cell Events: 4274 mean_circ: 0.948661
Ran for 109550 frames Cell Events: 4298 mean_circ: 0.948621
Ran for 110050 frames Cell Events: 4318 mean_circ: 0.948661
Ran for 110550 frames Cell Events: 4330 mean_circ: 0.948624
Ran for 111050 frames Cell Events: 4346 mean_circ: 0.94865
Ran for 112050 frames Cell Events: 4390 mean_circ: 0.948685
Ran for 112550 frames Cell Events: 4403 mean_circ: 0.948732
Ran for 114050 frames Cell Events: 4453 mean_circ: 0.948797
Ran for 115050 frames Cell Events: 4515 mean_circ: 0.948642
Ran for 115550 frames Cell Events: 4535 mean_circ: 0.948594
Ran for 116050 frames Cell Events: 4555 mean_circ: 0.948629
Ran for 116550 frames Cell Events: 4572 mean_circ: 0.94857
Ran for 117550 frames Cell Events: 4605 mean_circ: 0.948576
Ran for 118050 frames Cell Events: 4623 mean_circ: 0.948576
Ran for 118550 frames Cell Events: 4647 mean_circ: 0.948632
Ran for 119050 frames Cell Events: 4677 mean_circ: 0.948648
Ran for 119550 frames Cell Events: 4697 mean_circ: 0.948678
Ran for 120050 frames Cell Events: 4722 mean_circ: 0.948711
Ran for 120550 frames Cell Events: 4747 mean_circ: 0.948735
Ran for 121050 frames Cell Events: 4764 mean_circ: 0.948753
Ran for 121550 frames Cell Events: 4780 mean_circ: 0.948771
Ran for 122550 frames Cell Events: 4825 mean_circ: 0.948644
Ran for 123550 frames Cell Events: 4861 mean_circ: 0.948639
Ran for 124050 frames Cell Events: 4877 mean_circ: 0.948619
Ran for 124550 frames Cell Events: 4898 mean_circ: 0.948678
Ran for 125050 frames Cell Events: 4916 mean_circ: 0.94865
Ran for 125550 frames Cell Events: 4934 mean_circ: 0.948647
Ran for 126050 frames Cell Events: 4952 mean_circ: 0.948618
Ran for 126550 frames Cell Events: 4970 mean_circ: 0.948648
Ran for 127050 frames Cell Events: 4992 mean_circ: 0.948651
Ran for 128050 frames Cell Events: 5019 mean_circ: 0.948662
Ran for 129050 frames Cell Events: 5067 mean_circ: 0.948735
Ran for 129550 frames Cell Events: 5088 mean_circ: 0.948736
Ran for 130050 frames Cell Events: 5115 mean_circ: 0.94872
Ran for 131050 frames Cell Events: 5158 mean_circ: 0.94875
Ran for 131550 frames Cell Events: 5176 mean_circ: 0.94875
Ran for 132050 frames Cell Events: 5199 mean_circ: 0.948752
Ran for 133050 frames Cell Events: 5239 mean_circ: 0.9487
Ran for 133550 frames Cell Events: 5262 mean_circ: 0.948718
Ran for 134050 frames Cell Events: 5284 mean_circ: 0.94875
Ran for 134550 frames Cell Events: 5311 mean_circ: 0.948746
Ran for 135050 frames Cell Events: 5343 mean_circ: 0.948755
Ran for 136050 frames Cell Events: 5374 mean_circ: 0.948752
Ran for 136550 frames Cell Events: 5395 mean_circ: 0.94876
Ran for 137050 frames Cell Events: 5413 mean_circ: 0.948784
Ran for 138050 frames Cell Events: 5464 mean_circ: 0.948752
Ran for 138550 frames Cell Events: 5477 mean_circ: 0.948732
Ran for 139050 frames Cell Events: 5497 mean_circ: 0.948741
Ran for 139550 frames Cell Events: 5508 mean_circ: 0.948767
Ran for 140050 frames Cell Events: 5524 mean_circ: 0.948752
Ran for 141050 frames Cell Events: 5585 mean_circ: 0.948728
Ran for 142050 frames Cell Events: 5647 mean_circ: 0.948743
Ran for 142550 frames Cell Events: 5669 mean_circ: 0.948763
Ran for 143050 frames Cell Events: 5681 mean_circ: 0.948786
Ran for 144050 frames Cell Events: 5725 mean_circ: 0.948864
Ran for 144550 frames Cell Events: 5750 mean_circ: 0.948838
Ran for 145050 frames Cell Events: 5769 mean_circ: 0.948807
Ran for 145550 frames Cell Events: 5786 mean_circ: 0.9488
Ran for 146050 frames Cell Events: 5809 mean_circ: 0.948801
Ran for 146550 frames Cell Events: 5832 mean_circ: 0.94878
Ran for 148050 frames Cell Events: 5892 mean_circ: 0.948729
Ran for 150050 frames Cell Events: 5990 mean_circ: 0.948788
Ran for 151550 frames Cell Events: 6051 mean_circ: 0.948657
Ran for 152050 frames Cell Events: 6081 mean_circ: 0.948699
Ran for 152550 frames Cell Events: 6100 mean_circ: 0.948699
Ran for 153050 frames Cell Events: 6125 mean_circ: 0.948711
Ran for 153550 frames Cell Events: 6138 mean_circ: 0.948756
Ran for 154050 frames Cell Events: 6152 mean_circ: 0.948743
Ran for 154550 frames Cell Events: 6179 mean_circ: 0.948777
Ran for 155050 frames Cell Events: 6191 mean_circ: 0.948796
Ran for 155550 frames Cell Events: 6208 mean_circ: 0.948799
Ran for 156050 frames Cell Events: 6226 mean_circ: 0.948838
Ran for 156550 frames Cell Events: 6256 mean_circ: 0.94886
Ran for 157050 frames Cell Events: 6279 mean_circ: 0.948824
Ran for 158050 frames Cell Events: 6319 mean_circ: 0.948819
Ran for 158550 frames Cell Events: 6343 mean_circ: 0.94883
Ran for 159550 frames Cell Events: 6375 mean_circ: 0.948845
Ran for 160050 frames Cell Events: 6392 mean_circ: 0.948848
Ran for 161550 frames Cell Events: 6442 mean_circ: 0.94883
Ran for 162050 frames Cell Events: 6453 mean_circ: 0.948811
Ran for 162550 frames Cell Events: 6485 mean_circ: 0.94886
Ran for 163050 frames Cell Events: 6504 mean_circ: 0.948873
Ran for 163550 frames Cell Events: 6534 mean_circ: 0.948844
Ran for 164050 frames Cell Events: 6558 mean_circ: 0.948854
Ran for 164550 frames Cell Events: 6575 mean_circ: 0.948865
Ran for 165050 frames Cell Events: 6596 mean_circ: 0.948823
Ran for 165550 frames Cell Events: 6622 mean_circ: 0.948814
Ran for 166050 frames Cell Events: 6638 mean_circ: 0.948843
Ran for 166550 frames Cell Events: 6654 mean_circ: 0.948852
Ran for 167050 frames Cell Events: 6675 mean_circ: 0.948857
Ran for 167550 frames Cell Events: 6692 mean_circ: 0.948873
Ran for 168550 frames Cell Events: 6733 mean_circ: 0.94882
Ran for 169050 frames Cell Events: 6756 mean_circ: 0.948848
Ran for 170050 frames Cell Events: 6811 mean_circ: 0.94888
Ran for 170550 frames Cell Events: 6830 mean_circ: 0.948872
Ran for 171550 frames Cell Events: 6884 mean_circ: 0.94888
Ran for 172050 frames Cell Events: 6907 mean_circ: 0.948824
Ran for 172550 frames Cell Events: 6928 mean_circ: 0.948839
Ran for 173050 frames Cell Events: 6946 mean_circ: 0.948844
Ran for 173550 frames Cell Events: 6966 mean_circ: 0.948844
Ran for 174050 frames Cell Events: 6983 mean_circ: 0.948826
Ran for 174550 frames Cell Events: 7008 mean_circ: 0.948803
Ran for 175550 frames Cell Events: 7064 mean_circ: 0.94879
Ran for 176050 frames Cell Events: 7093 mean_circ: 0.9488
Ran for 176550 frames Cell Events: 7112 mean_circ: 0.948823
Ran for 177550 frames Cell Events: 7153 mean_circ: 0.948841
Ran for 178050 frames Cell Events: 7179 mean_circ: 0.948872
Ran for 178550 frames Cell Events: 7212 mean_circ: 0.94889
Ran for 180050 frames Cell Events: 7281 mean_circ: 0.948861
Ran for 180550 frames Cell Events: 7299 mean_circ: 0.948861
Ran for 182050 frames Cell Events: 7361 mean_circ: 0.948895
Ran for 183050 frames Cell Events: 7398 mean_circ: 0.948833
Ran for 185050 frames Cell Events: 7494 mean_circ: 0.948935
Ran for 185550 frames Cell Events: 7511 mean_circ: 0.948918
Ran for 186050 frames Cell Events: 7530 mean_circ: 0.948907
Ran for 186550 frames Cell Events: 7550 mean_circ: 0.94893
Ran for 187050 frames Cell Events: 7571 mean_circ: 0.948928
Ran for 187550 frames Cell Events: 7591 mean_circ: 0.948937
Ran for 188050 frames Cell Events: 7611 mean_circ: 0.948974
Ran for 188550 frames Cell Events: 7630 mean_circ: 0.948999
Ran for 189050 frames Cell Events: 7649 mean_circ: 0.948989
Ran for 189550 frames Cell Events: 7662 mean_circ: 0.949016
Ran for 190050 frames Cell Events: 7685 mean_circ: 0.949019
Ran for 190550 frames Cell Events: 7708 mean_circ: 0.949018
Ran for 191050 frames Cell Events: 7727 mean_circ: 0.94902
Ran for 192050 frames Cell Events: 7772 mean_circ: 0.949026
Ran for 193050 frames Cell Events: 7817 mean_circ: 0.949066
Ran for 193550 frames Cell Events: 7843 mean_circ: 0.949058
Ran for 194550 frames Cell Events: 7895 mean_circ: 0.949037
Ran for 195550 frames Cell Events: 7938 mean_circ: 0.949074
Ran for 196050 frames Cell Events: 7957 mean_circ: 0.949094
Ran for 196550 frames Cell Events: 7977 mean_circ: 0.949099
Ran for 197050 frames Cell Events: 7991 mean_circ: 0.949125
Ran for 198050 frames Cell Events: 8033 mean_circ: 0.949136
Ran for 198550 frames Cell Events: 8045 mean_circ: 0.949124
Ran for 199050 frames Cell Events: 8077 mean_circ: 0.949082
Ran for 200050 frames Cell Events: 8125 mean_circ: 0.949072
Ran for 200550 frames Cell Events: 8149 mean_circ: 0.949057
Ran for 201050 frames Cell Events: 8160 mean_circ: 0.949067
Ran for 203550 frames Cell Events: 8270 mean_circ: 0.949108
Ran for 204050 frames Cell Events: 8288 mean_circ: 0.94912
Ran for 204550 frames Cell Events: 8315 mean_circ: 0.949119
Ran for 205050 frames Cell Events: 8333 mean_circ: 0.94912
Ran for 205550 frames Cell Events: 8352 mean_circ: 0.949133
Ran for 206050 frames Cell Events: 8373 mean_circ: 0.949158
Ran for 206550 frames Cell Events: 8400 mean_circ: 0.949168
Ran for 207050 frames Cell Events: 8420 mean_circ: 0.949189
Ran for 207550 frames Cell Events: 8434 mean_circ: 0.949175
Ran for 208050 frames Cell Events: 8447 mean_circ: 0.949178
Ran for 208550 frames Cell Events: 8467 mean_circ: 0.949186
Ran for 209050 frames Cell Events: 8488 mean_circ: 0.949203
Ran for 209550 frames Cell Events: 8506 mean_circ: 0.949217



End this measurment..



Stopping time: 4.73766e+008
****************************************
Measurement finished

Mean Circularitiy: 0.949232
Mean Area: 589.098
Mean FL-1 intensity: 3350.23
Mean FL-2 intensity: 3895.12
Mean FL-3 intensity: 0

frames processed: 210040
Total Time: 105106ms
Number of Runs (new bg img) 0
Frames collected: 210040
Skipped frames: 3254
Rescued Frames: 452965
Samples DAQ: 52511484
Samples written: 105021228
Samples per Channel: 52510614
FPS: 1998.36

Samples per second: 499597
Expected samples/s: 500000

Events: 8524
Events per second: 81.0991
jumped back (PMT): 6298
#Frames read, frequency
# 0 frames :286346
# 1 frames :117038
# 2 frames :4641
# 3 frames :1879
# 4 frames :551
# 5 frames :2965
# 6 frames :1845
# 7 frames :999
# 8 frames :545
# 9 frames :326
# 10 frames :1024
# 11 frames :697
# 12 frames :368
# 13 frames :191
# 14 frames :143
# 15 frames :106
# 16 frames :87
# 17 frames :89
# 18 frames :65
# 19 frames :48
# 20 frames :29
# 21 frames :13
# 22 frames :11
# 23 frames :9
# 24 frames :8
# 25 frames :7
# 26 frames :4
# 27 frames :4
# 28 frames :1
# 29 frames :5
# 30 frames :2
# 31 frames :1
# 32 frames :1
# 40 frames :1
# 47 frames :1
# 48 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.9567
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0