Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_15.18.51 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "aecd4e8c04587b62369cd2f3653c773b",
"name": "M1_20170609_1254_dsRNA_X4_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "13:19:15"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10000 (max 10001) in
'10000'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.1687
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.17631e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 23 mean_circ: 0.94936
Ran for 1550 frames Cell Events: 59 mean_circ: 0.946029
Ran for 2050 frames Cell Events: 75 mean_circ: 0.948438
Ran for 3050 frames Cell Events: 98 mean_circ: 0.949871
Ran for 4050 frames Cell Events: 115 mean_circ: 0.950986
Ran for 4550 frames Cell Events: 123 mean_circ: 0.951349
Ran for 5050 frames Cell Events: 141 mean_circ: 0.951078
Ran for 7550 frames Cell Events: 221 mean_circ: 0.95112
Ran for 8050 frames Cell Events: 236 mean_circ: 0.950845
Ran for 8550 frames Cell Events: 253 mean_circ: 0.950253
Ran for 9050 frames Cell Events: 265 mean_circ: 0.950559
Ran for 9550 frames Cell Events: 281 mean_circ: 0.950989
Ran for 10050 frames Cell Events: 304 mean_circ: 0.950365
Ran for 10550 frames Cell Events: 319 mean_circ: 0.949945
Ran for 11050 frames Cell Events: 326 mean_circ: 0.949637
Ran for 11550 frames Cell Events: 337 mean_circ: 0.949329
Ran for 12050 frames Cell Events: 344 mean_circ: 0.949072
Ran for 12550 frames Cell Events: 360 mean_circ: 0.948957
Ran for 13050 frames Cell Events: 382 mean_circ: 0.948548
Ran for 13550 frames Cell Events: 401 mean_circ: 0.948742
Ran for 15050 frames Cell Events: 438 mean_circ: 0.948446
Ran for 16550 frames Cell Events: 492 mean_circ: 0.948043
Ran for 18550 frames Cell Events: 555 mean_circ: 0.948554
Ran for 19050 frames Cell Events: 570 mean_circ: 0.948412
Ran for 19550 frames Cell Events: 581 mean_circ: 0.948362
Ran for 20050 frames Cell Events: 593 mean_circ: 0.948362
Ran for 21050 frames Cell Events: 624 mean_circ: 0.948566
Ran for 21550 frames Cell Events: 637 mean_circ: 0.948401
Ran for 22050 frames Cell Events: 647 mean_circ: 0.948261
Ran for 22550 frames Cell Events: 660 mean_circ: 0.948002
Ran for 23050 frames Cell Events: 674 mean_circ: 0.948079
Ran for 23550 frames Cell Events: 687 mean_circ: 0.948375
Ran for 24050 frames Cell Events: 698 mean_circ: 0.948649
Ran for 25050 frames Cell Events: 736 mean_circ: 0.948298
Ran for 26050 frames Cell Events: 757 mean_circ: 0.947877
Ran for 26550 frames Cell Events: 771 mean_circ: 0.948032
Ran for 27050 frames Cell Events: 787 mean_circ: 0.948261
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Ran for 28050 frames Cell Events: 813 mean_circ: 0.948601
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Ran for 29050 frames Cell Events: 836 mean_circ: 0.948803
Ran for 29550 frames Cell Events: 858 mean_circ: 0.948669
Ran for 30050 frames Cell Events: 874 mean_circ: 0.948414
Ran for 30550 frames Cell Events: 894 mean_circ: 0.947874
Ran for 32050 frames Cell Events: 947 mean_circ: 0.948498
Ran for 32550 frames Cell Events: 970 mean_circ: 0.948408
Ran for 33050 frames Cell Events: 988 mean_circ: 0.948669
Ran for 33550 frames Cell Events: 1002 mean_circ: 0.948588
Ran for 34050 frames Cell Events: 1010 mean_circ: 0.948728
Ran for 35550 frames Cell Events: 1054 mean_circ: 0.949044
Ran for 36050 frames Cell Events: 1068 mean_circ: 0.949098
Ran for 36550 frames Cell Events: 1083 mean_circ: 0.949188
Ran for 37050 frames Cell Events: 1094 mean_circ: 0.949016
Ran for 37550 frames Cell Events: 1109 mean_circ: 0.948705
Ran for 38050 frames Cell Events: 1122 mean_circ: 0.948728
Ran for 39050 frames Cell Events: 1166 mean_circ: 0.94896
Ran for 40050 frames Cell Events: 1200 mean_circ: 0.949047
Ran for 40550 frames Cell Events: 1217 mean_circ: 0.948884
Ran for 41050 frames Cell Events: 1231 mean_circ: 0.949058
Ran for 41550 frames Cell Events: 1237 mean_circ: 0.949022
Ran for 42050 frames Cell Events: 1248 mean_circ: 0.949087
Ran for 42550 frames Cell Events: 1264 mean_circ: 0.948965
Ran for 43050 frames Cell Events: 1278 mean_circ: 0.949036
Ran for 43550 frames Cell Events: 1295 mean_circ: 0.948961
Ran for 44050 frames Cell Events: 1319 mean_circ: 0.948945
Ran for 44550 frames Cell Events: 1331 mean_circ: 0.948873
Ran for 45050 frames Cell Events: 1343 mean_circ: 0.948894
Ran for 45550 frames Cell Events: 1356 mean_circ: 0.948741
Ran for 46550 frames Cell Events: 1389 mean_circ: 0.948726
Ran for 47050 frames Cell Events: 1404 mean_circ: 0.948832
Ran for 47550 frames Cell Events: 1418 mean_circ: 0.948846
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Ran for 52050 frames Cell Events: 1557 mean_circ: 0.949074
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Ran for 53550 frames Cell Events: 1600 mean_circ: 0.949203
Ran for 55050 frames Cell Events: 1646 mean_circ: 0.949424
Ran for 55550 frames Cell Events: 1663 mean_circ: 0.949425
Ran for 56550 frames Cell Events: 1688 mean_circ: 0.949529
Ran for 57050 frames Cell Events: 1703 mean_circ: 0.949561
Ran for 57550 frames Cell Events: 1716 mean_circ: 0.949308
Ran for 59550 frames Cell Events: 1784 mean_circ: 0.949107
Ran for 60050 frames Cell Events: 1797 mean_circ: 0.949076
Ran for 60550 frames Cell Events: 1807 mean_circ: 0.949191
Ran for 62050 frames Cell Events: 1855 mean_circ: 0.948851
Ran for 63050 frames Cell Events: 1896 mean_circ: 0.948699
Ran for 63550 frames Cell Events: 1915 mean_circ: 0.948484
Ran for 64050 frames Cell Events: 1938 mean_circ: 0.948418
Ran for 64550 frames Cell Events: 1958 mean_circ: 0.94833
Ran for 66050 frames Cell Events: 1997 mean_circ: 0.948576
Ran for 67050 frames Cell Events: 2027 mean_circ: 0.94856
Ran for 68050 frames Cell Events: 2051 mean_circ: 0.948596
Ran for 68550 frames Cell Events: 2063 mean_circ: 0.94864
Ran for 69550 frames Cell Events: 2094 mean_circ: 0.948631
Ran for 70550 frames Cell Events: 2127 mean_circ: 0.948575
Ran for 71550 frames Cell Events: 2164 mean_circ: 0.948571
Ran for 72550 frames Cell Events: 2198 mean_circ: 0.948755
Ran for 73050 frames Cell Events: 2213 mean_circ: 0.948847
Ran for 73550 frames Cell Events: 2225 mean_circ: 0.948891
Ran for 74050 frames Cell Events: 2239 mean_circ: 0.948703
Ran for 74550 frames Cell Events: 2245 mean_circ: 0.948692
Ran for 75050 frames Cell Events: 2262 mean_circ: 0.948741
Ran for 76050 frames Cell Events: 2291 mean_circ: 0.948932
Ran for 76550 frames Cell Events: 2311 mean_circ: 0.948924
Ran for 78050 frames Cell Events: 2357 mean_circ: 0.949051
Ran for 78550 frames Cell Events: 2372 mean_circ: 0.949084
Ran for 79050 frames Cell Events: 2385 mean_circ: 0.949057
Ran for 80050 frames Cell Events: 2420 mean_circ: 0.949024
Ran for 81050 frames Cell Events: 2454 mean_circ: 0.949038
Ran for 81550 frames Cell Events: 2467 mean_circ: 0.948995
Ran for 82050 frames Cell Events: 2483 mean_circ: 0.94906
Ran for 82550 frames Cell Events: 2492 mean_circ: 0.949104
Ran for 83050 frames Cell Events: 2504 mean_circ: 0.949141
Ran for 83550 frames Cell Events: 2519 mean_circ: 0.949124
Ran for 84050 frames Cell Events: 2530 mean_circ: 0.949104
Ran for 84550 frames Cell Events: 2548 mean_circ: 0.949136
Ran for 88050 frames Cell Events: 2682 mean_circ: 0.949076
Ran for 88550 frames Cell Events: 2698 mean_circ: 0.949115
Ran for 89550 frames Cell Events: 2736 mean_circ: 0.949215
Ran for 90050 frames Cell Events: 2742 mean_circ: 0.949258
Ran for 90550 frames Cell Events: 2749 mean_circ: 0.949288
Ran for 91550 frames Cell Events: 2779 mean_circ: 0.949377
Ran for 92550 frames Cell Events: 2815 mean_circ: 0.949469
Ran for 93050 frames Cell Events: 2827 mean_circ: 0.94953
Ran for 93550 frames Cell Events: 2847 mean_circ: 0.949607
Ran for 94050 frames Cell Events: 2863 mean_circ: 0.949686
Ran for 94550 frames Cell Events: 2874 mean_circ: 0.949723
Ran for 95550 frames Cell Events: 2896 mean_circ: 0.949698
Ran for 96050 frames Cell Events: 2909 mean_circ: 0.949736
Ran for 96550 frames Cell Events: 2918 mean_circ: 0.94971
Ran for 97050 frames Cell Events: 2932 mean_circ: 0.949722
Ran for 97550 frames Cell Events: 2950 mean_circ: 0.949724
Ran for 98050 frames Cell Events: 2968 mean_circ: 0.949804
Ran for 99550 frames Cell Events: 3011 mean_circ: 0.949773
Ran for 100050 frames Cell Events: 3031 mean_circ: 0.949862
Ran for 100550 frames Cell Events: 3055 mean_circ: 0.949865
Ran for 101050 frames Cell Events: 3067 mean_circ: 0.94988
Ran for 102050 frames Cell Events: 3098 mean_circ: 0.94993
Ran for 104050 frames Cell Events: 3160 mean_circ: 0.949816
Ran for 104550 frames Cell Events: 3180 mean_circ: 0.949793
Ran for 105050 frames Cell Events: 3194 mean_circ: 0.949831
Ran for 106050 frames Cell Events: 3222 mean_circ: 0.949796
Ran for 107550 frames Cell Events: 3287 mean_circ: 0.949827
Ran for 108050 frames Cell Events: 3299 mean_circ: 0.949857
Ran for 108550 frames Cell Events: 3312 mean_circ: 0.949807
Ran for 109050 frames Cell Events: 3326 mean_circ: 0.949837
Ran for 110050 frames Cell Events: 3371 mean_circ: 0.949861
Ran for 110550 frames Cell Events: 3378 mean_circ: 0.949867
Ran for 111050 frames Cell Events: 3400 mean_circ: 0.94987
Ran for 112050 frames Cell Events: 3422 mean_circ: 0.949813
Ran for 112550 frames Cell Events: 3432 mean_circ: 0.949762
Ran for 114050 frames Cell Events: 3503 mean_circ: 0.949832
Ran for 114550 frames Cell Events: 3522 mean_circ: 0.949883
Ran for 115050 frames Cell Events: 3530 mean_circ: 0.949911
Ran for 116550 frames Cell Events: 3602 mean_circ: 0.949995
Ran for 117050 frames Cell Events: 3623 mean_circ: 0.949992
Ran for 117550 frames Cell Events: 3640 mean_circ: 0.950056
Ran for 118050 frames Cell Events: 3658 mean_circ: 0.950101
Ran for 118550 frames Cell Events: 3676 mean_circ: 0.950148
Ran for 119050 frames Cell Events: 3702 mean_circ: 0.950215
Ran for 119550 frames Cell Events: 3719 mean_circ: 0.950239
Ran for 122550 frames Cell Events: 3855 mean_circ: 0.950134
Ran for 123550 frames Cell Events: 3881 mean_circ: 0.950199
Ran for 124050 frames Cell Events: 3898 mean_circ: 0.950211
Ran for 125550 frames Cell Events: 3951 mean_circ: 0.950295
Ran for 126550 frames Cell Events: 3981 mean_circ: 0.950335
Ran for 127050 frames Cell Events: 3993 mean_circ: 0.950309
Ran for 127550 frames Cell Events: 4003 mean_circ: 0.950283
Ran for 128550 frames Cell Events: 4043 mean_circ: 0.950231
Ran for 129550 frames Cell Events: 4070 mean_circ: 0.950218
Ran for 130550 frames Cell Events: 4101 mean_circ: 0.950261
Ran for 131050 frames Cell Events: 4121 mean_circ: 0.950324
Ran for 134050 frames Cell Events: 4227 mean_circ: 0.950242
Ran for 136550 frames Cell Events: 4313 mean_circ: 0.950168
Ran for 137050 frames Cell Events: 4334 mean_circ: 0.950175
Ran for 137550 frames Cell Events: 4352 mean_circ: 0.950187
Ran for 138550 frames Cell Events: 4384 mean_circ: 0.950207
Ran for 139050 frames Cell Events: 4400 mean_circ: 0.950204
Ran for 139550 frames Cell Events: 4410 mean_circ: 0.950219
Ran for 140550 frames Cell Events: 4448 mean_circ: 0.950223
Ran for 142050 frames Cell Events: 4506 mean_circ: 0.950182
Ran for 143550 frames Cell Events: 4548 mean_circ: 0.950097
Ran for 144550 frames Cell Events: 4588 mean_circ: 0.950164
Ran for 145050 frames Cell Events: 4604 mean_circ: 0.95017
Ran for 145550 frames Cell Events: 4617 mean_circ: 0.950074
Ran for 146050 frames Cell Events: 4635 mean_circ: 0.950074
Ran for 146550 frames Cell Events: 4656 mean_circ: 0.950058
Ran for 148050 frames Cell Events: 4702 mean_circ: 0.950008
Ran for 148550 frames Cell Events: 4711 mean_circ: 0.950008
Ran for 149050 frames Cell Events: 4720 mean_circ: 0.950009
Ran for 149550 frames Cell Events: 4739 mean_circ: 0.950002
Ran for 150050 frames Cell Events: 4764 mean_circ: 0.950041
Ran for 150550 frames Cell Events: 4775 mean_circ: 0.95006
Ran for 151050 frames Cell Events: 4792 mean_circ: 0.950116
Ran for 151550 frames Cell Events: 4800 mean_circ: 0.950116
Ran for 153550 frames Cell Events: 4871 mean_circ: 0.950109
Ran for 154050 frames Cell Events: 4882 mean_circ: 0.95013
Ran for 154550 frames Cell Events: 4903 mean_circ: 0.950102
Ran for 156550 frames Cell Events: 4976 mean_circ: 0.950016
Ran for 159050 frames Cell Events: 5051 mean_circ: 0.950002
Ran for 159550 frames Cell Events: 5065 mean_circ: 0.950018
Ran for 161050 frames Cell Events: 5121 mean_circ: 0.950015
Ran for 161550 frames Cell Events: 5145 mean_circ: 0.950027
Ran for 162050 frames Cell Events: 5158 mean_circ: 0.950028
Ran for 162550 frames Cell Events: 5184 mean_circ: 0.950037
Ran for 163050 frames Cell Events: 5199 mean_circ: 0.950066
Ran for 164050 frames Cell Events: 5238 mean_circ: 0.950137
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Ran for 165550 frames Cell Events: 5288 mean_circ: 0.950033
Ran for 166550 frames Cell Events: 5319 mean_circ: 0.950083
Ran for 167050 frames Cell Events: 5338 mean_circ: 0.950077
Ran for 167550 frames Cell Events: 5355 mean_circ: 0.950136
Ran for 168050 frames Cell Events: 5364 mean_circ: 0.950135
Ran for 168550 frames Cell Events: 5376 mean_circ: 0.950156
Ran for 169050 frames Cell Events: 5388 mean_circ: 0.950169
Ran for 169550 frames Cell Events: 5396 mean_circ: 0.950161
Ran for 170550 frames Cell Events: 5426 mean_circ: 0.9501
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Ran for 172050 frames Cell Events: 5487 mean_circ: 0.950074
Ran for 172550 frames Cell Events: 5504 mean_circ: 0.950061
Ran for 173050 frames Cell Events: 5511 mean_circ: 0.950064
Ran for 175050 frames Cell Events: 5573 mean_circ: 0.950148
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Ran for 177050 frames Cell Events: 5637 mean_circ: 0.950203
Ran for 177550 frames Cell Events: 5662 mean_circ: 0.950258
Ran for 180050 frames Cell Events: 5748 mean_circ: 0.950206
Ran for 180550 frames Cell Events: 5759 mean_circ: 0.950209
Ran for 181050 frames Cell Events: 5777 mean_circ: 0.950216
Ran for 182050 frames Cell Events: 5829 mean_circ: 0.950295
Ran for 182550 frames Cell Events: 5845 mean_circ: 0.950288
Ran for 183550 frames Cell Events: 5872 mean_circ: 0.950284
Ran for 184050 frames Cell Events: 5892 mean_circ: 0.950266
Ran for 184550 frames Cell Events: 5904 mean_circ: 0.950275
Ran for 185550 frames Cell Events: 5935 mean_circ: 0.950219
Ran for 186550 frames Cell Events: 5974 mean_circ: 0.950191
Ran for 187550 frames Cell Events: 6003 mean_circ: 0.950161
Ran for 188050 frames Cell Events: 6015 mean_circ: 0.950152
Ran for 188550 frames Cell Events: 6035 mean_circ: 0.95017
Ran for 189550 frames Cell Events: 6066 mean_circ: 0.950161
Ran for 190050 frames Cell Events: 6076 mean_circ: 0.950153
Ran for 191550 frames Cell Events: 6141 mean_circ: 0.950145
Ran for 192550 frames Cell Events: 6176 mean_circ: 0.950142
Ran for 193550 frames Cell Events: 6206 mean_circ: 0.950141
Ran for 194050 frames Cell Events: 6221 mean_circ: 0.950131
Ran for 195550 frames Cell Events: 6278 mean_circ: 0.950129
Ran for 196050 frames Cell Events: 6291 mean_circ: 0.950134
Ran for 197050 frames Cell Events: 6315 mean_circ: 0.950167
Ran for 198050 frames Cell Events: 6353 mean_circ: 0.950158
Ran for 198550 frames Cell Events: 6364 mean_circ: 0.950141
Ran for 199050 frames Cell Events: 6373 mean_circ: 0.950133
Ran for 199550 frames Cell Events: 6385 mean_circ: 0.950136
Ran for 201050 frames Cell Events: 6436 mean_circ: 0.950201
Ran for 202050 frames Cell Events: 6465 mean_circ: 0.950208
Ran for 202550 frames Cell Events: 6479 mean_circ: 0.950219
Ran for 203050 frames Cell Events: 6498 mean_circ: 0.950253
Ran for 203550 frames Cell Events: 6527 mean_circ: 0.950264
Ran for 205050 frames Cell Events: 6585 mean_circ: 0.950291
Ran for 205550 frames Cell Events: 6602 mean_circ: 0.950302
Ran for 207550 frames Cell Events: 6682 mean_circ: 0.950309
Ran for 208050 frames Cell Events: 6700 mean_circ: 0.950332
Ran for 210550 frames Cell Events: 6788 mean_circ: 0.950391
Ran for 211050 frames Cell Events: 6802 mean_circ: 0.950405
Ran for 211550 frames Cell Events: 6820 mean_circ: 0.950343
Ran for 212050 frames Cell Events: 6833 mean_circ: 0.950363
Ran for 212550 frames Cell Events: 6856 mean_circ: 0.95036
Ran for 214550 frames Cell Events: 6936 mean_circ: 0.950412
Ran for 215050 frames Cell Events: 6946 mean_circ: 0.95041
Ran for 216550 frames Cell Events: 6997 mean_circ: 0.950391
Ran for 217050 frames Cell Events: 7022 mean_circ: 0.95039
Ran for 217550 frames Cell Events: 7036 mean_circ: 0.950372
Ran for 218550 frames Cell Events: 7055 mean_circ: 0.950378
Ran for 219050 frames Cell Events: 7064 mean_circ: 0.950386
Ran for 220050 frames Cell Events: 7097 mean_circ: 0.950367
Ran for 220550 frames Cell Events: 7110 mean_circ: 0.950352
Ran for 222050 frames Cell Events: 7150 mean_circ: 0.950397
Ran for 222550 frames Cell Events: 7173 mean_circ: 0.950409
Ran for 224550 frames Cell Events: 7253 mean_circ: 0.950415
Ran for 227550 frames Cell Events: 7371 mean_circ: 0.950294
Ran for 228050 frames Cell Events: 7380 mean_circ: 0.950295
Ran for 228550 frames Cell Events: 7409 mean_circ: 0.950276
Ran for 229050 frames Cell Events: 7428 mean_circ: 0.950291
Ran for 229550 frames Cell Events: 7445 mean_circ: 0.950291
Ran for 230050 frames Cell Events: 7460 mean_circ: 0.950229
Ran for 230550 frames Cell Events: 7474 mean_circ: 0.950226
Ran for 231050 frames Cell Events: 7493 mean_circ: 0.950231
Ran for 232050 frames Cell Events: 7532 mean_circ: 0.95026
Ran for 233050 frames Cell Events: 7566 mean_circ: 0.950276
Ran for 233550 frames Cell Events: 7592 mean_circ: 0.950288
Ran for 234050 frames Cell Events: 7615 mean_circ: 0.950265
Ran for 234550 frames Cell Events: 7637 mean_circ: 0.950289
Ran for 235050 frames Cell Events: 7656 mean_circ: 0.95029
Ran for 236050 frames Cell Events: 7690 mean_circ: 0.950309
Ran for 238550 frames Cell Events: 7771 mean_circ: 0.950315
Ran for 240050 frames Cell Events: 7806 mean_circ: 0.950295
Ran for 241050 frames Cell Events: 7853 mean_circ: 0.950322
Ran for 243050 frames Cell Events: 7922 mean_circ: 0.950321
Ran for 243550 frames Cell Events: 7929 mean_circ: 0.950322
Ran for 247050 frames Cell Events: 8031 mean_circ: 0.950278
Ran for 247550 frames Cell Events: 8039 mean_circ: 0.950287
Ran for 248050 frames Cell Events: 8058 mean_circ: 0.950306
Ran for 249050 frames Cell Events: 8098 mean_circ: 0.950313
Ran for 249550 frames Cell Events: 8116 mean_circ: 0.95031
Ran for 250050 frames Cell Events: 8134 mean_circ: 0.950307
Ran for 251550 frames Cell Events: 8167 mean_circ: 0.950287
Ran for 252050 frames Cell Events: 8189 mean_circ: 0.950287
Ran for 253050 frames Cell Events: 8224 mean_circ: 0.950252
Ran for 256050 frames Cell Events: 8334 mean_circ: 0.950354
Ran for 256550 frames Cell Events: 8353 mean_circ: 0.950349
Ran for 257050 frames Cell Events: 8376 mean_circ: 0.950373
Ran for 257550 frames Cell Events: 8394 mean_circ: 0.95038
Ran for 258050 frames Cell Events: 8402 mean_circ: 0.95037
Ran for 258550 frames Cell Events: 8413 mean_circ: 0.950365
Ran for 259050 frames Cell Events: 8429 mean_circ: 0.950392
Ran for 259550 frames Cell Events: 8445 mean_circ: 0.950363
Ran for 260050 frames Cell Events: 8456 mean_circ: 0.950364
Ran for 260550 frames Cell Events: 8469 mean_circ: 0.950365
Ran for 261050 frames Cell Events: 8497 mean_circ: 0.950365
Ran for 263050 frames Cell Events: 8579 mean_circ: 0.95028
Ran for 263550 frames Cell Events: 8597 mean_circ: 0.950284
Ran for 264550 frames Cell Events: 8628 mean_circ: 0.950296
Ran for 266550 frames Cell Events: 8703 mean_circ: 0.950287
Ran for 267050 frames Cell Events: 8715 mean_circ: 0.950243
Ran for 267550 frames Cell Events: 8734 mean_circ: 0.950259
Ran for 268050 frames Cell Events: 8758 mean_circ: 0.950242
Ran for 268550 frames Cell Events: 8770 mean_circ: 0.950244
Ran for 269050 frames Cell Events: 8797 mean_circ: 0.950258
Ran for 270050 frames Cell Events: 8821 mean_circ: 0.950238
Ran for 273050 frames Cell Events: 8929 mean_circ: 0.950218
Ran for 274050 frames Cell Events: 8955 mean_circ: 0.950261
Ran for 275050 frames Cell Events: 8980 mean_circ: 0.950245
Ran for 276550 frames Cell Events: 9038 mean_circ: 0.950266
Ran for 277550 frames Cell Events: 9087 mean_circ: 0.950279
Ran for 278550 frames Cell Events: 9141 mean_circ: 0.950289
Ran for 279050 frames Cell Events: 9153 mean_circ: 0.950294
Ran for 280550 frames Cell Events: 9202 mean_circ: 0.950318
Ran for 281050 frames Cell Events: 9220 mean_circ: 0.95035
Ran for 281550 frames Cell Events: 9236 mean_circ: 0.950331
Ran for 282050 frames Cell Events: 9257 mean_circ: 0.950293
Ran for 283050 frames Cell Events: 9295 mean_circ: 0.950275
Ran for 284050 frames Cell Events: 9318 mean_circ: 0.950255
Ran for 284550 frames Cell Events: 9332 mean_circ: 0.950255
Ran for 285050 frames Cell Events: 9348 mean_circ: 0.950218
Ran for 285550 frames Cell Events: 9368 mean_circ: 0.950215
Ran for 286050 frames Cell Events: 9389 mean_circ: 0.950225
Ran for 286550 frames Cell Events: 9401 mean_circ: 0.950224
Ran for 288050 frames Cell Events: 9449 mean_circ: 0.950209
Ran for 289050 frames Cell Events: 9474 mean_circ: 0.950225
Ran for 290550 frames Cell Events: 9526 mean_circ: 0.950285
Ran for 291050 frames Cell Events: 9548 mean_circ: 0.950264
Ran for 291550 frames Cell Events: 9571 mean_circ: 0.950257
Ran for 294550 frames Cell Events: 9655 mean_circ: 0.950234
Ran for 295550 frames Cell Events: 9691 mean_circ: 0.950224
Ran for 296050 frames Cell Events: 9706 mean_circ: 0.950227
Ran for 297550 frames Cell Events: 9749 mean_circ: 0.95016
Ran for 298050 frames Cell Events: 9764 mean_circ: 0.950141
Ran for 298550 frames Cell Events: 9781 mean_circ: 0.950144
Ran for 299050 frames Cell Events: 9791 mean_circ: 0.950138
Ran for 299550 frames Cell Events: 9811 mean_circ: 0.950155
Ran for 300550 frames Cell Events: 9852 mean_circ: 0.950199
Ran for 302050 frames Cell Events: 9893 mean_circ: 0.950193
Ran for 302550 frames Cell Events: 9908 mean_circ: 0.950211



End this measurment.
because stop condition (time/nr of cells) was met

Stopping time: 2.17646e+009
****************************************
Measurement finished

Mean Circularitiy: 0.950172
Mean Area: 647.893
Mean FL-1 intensity: 3909.33
Mean FL-2 intensity: 4842.93
Mean FL-3 intensity: 0

frames processed: 303888
Total Time: 152459ms
Number of Runs (new bg img) 0
Frames collected: 304792
Skipped frames: 10951
Rescued Frames: 1074756
Samples DAQ: 76197900
Samples written: 152395716
Samples per Channel: 76197858
FPS: 1999.17

Samples per second: 499791
Expected samples/s: 500000

Events: 10001
Events per second: 65.5978
jumped back (PMT): 4494
#Frames read, frequency
# 0 frames :451210
# 1 frames :137129
# 2 frames :4915
# 3 frames :2531
# 4 frames :1341
# 5 frames :840
# 6 frames :895
# 7 frames :2022
# 8 frames :1330
# 9 frames :1013
# 10 frames :967
# 11 frames :945
# 12 frames :695
# 13 frames :487
# 14 frames :379
# 15 frames :297
# 16 frames :267
# 17 frames :272
# 18 frames :280
# 19 frames :282
# 20 frames :268
# 21 frames :195
# 22 frames :189
# 23 frames :126
# 24 frames :106
# 25 frames :76
# 26 frames :66
# 27 frames :55
# 28 frames :40
# 29 frames :43
# 30 frames :43
# 31 frames :32
# 32 frames :26
# 33 frames :23
# 34 frames :24
# 35 frames :17
# 36 frames :24
# 37 frames :7
# 38 frames :8
# 39 frames :14
# 40 frames :13
# 41 frames :12
# 42 frames :9
# 43 frames :9
# 44 frames :10
# 45 frames :5
# 46 frames :3
# 47 frames :1
# 48 frames :3
# 49 frames :1
# 50 frames :2
# 51 frames :1
# 52 frames :1
# 54 frames :2
# 56 frames :2
# 58 frames :1
# 59 frames :1
# 60 frames :2
# 64 frames :2
# 65 frames :1
# 68 frames :1
# 83 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.1687
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0