Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_15.24.36 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "0468352a247128c3a2bfbc24319ab6dd",
"name": "M1_20170609_1410_dsRNA_Y2_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "13:24:56"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 7998 (max 8000) in '7998'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.2705
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.18085e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 43 mean_circ: 0.895506
Ran for 1550 frames Cell Events: 59 mean_circ: 0.925334
Ran for 3050 frames Cell Events: 108 mean_circ: 0.929993
Ran for 3550 frames Cell Events: 125 mean_circ: 0.935072
Ran for 4050 frames Cell Events: 137 mean_circ: 0.935392
Ran for 4550 frames Cell Events: 152 mean_circ: 0.936039
Ran for 5050 frames Cell Events: 167 mean_circ: 0.937247
Ran for 5550 frames Cell Events: 179 mean_circ: 0.937369
Ran for 6050 frames Cell Events: 191 mean_circ: 0.938653
Ran for 6550 frames Cell Events: 207 mean_circ: 0.938135
Ran for 7050 frames Cell Events: 219 mean_circ: 0.939016
Ran for 7550 frames Cell Events: 235 mean_circ: 0.938151
Ran for 8050 frames Cell Events: 251 mean_circ: 0.938261
Ran for 8550 frames Cell Events: 261 mean_circ: 0.93902
Ran for 9050 frames Cell Events: 274 mean_circ: 0.939539
Ran for 9550 frames Cell Events: 289 mean_circ: 0.939881
Ran for 10050 frames Cell Events: 310 mean_circ: 0.940524
Ran for 10550 frames Cell Events: 320 mean_circ: 0.940366
Ran for 11050 frames Cell Events: 335 mean_circ: 0.940366
Ran for 11550 frames Cell Events: 358 mean_circ: 0.939871
Ran for 12050 frames Cell Events: 374 mean_circ: 0.939836
Ran for 13050 frames Cell Events: 403 mean_circ: 0.940172
Ran for 13550 frames Cell Events: 419 mean_circ: 0.939737
Ran for 14050 frames Cell Events: 440 mean_circ: 0.939186
Ran for 14550 frames Cell Events: 459 mean_circ: 0.939999
Ran for 15050 frames Cell Events: 469 mean_circ: 0.940344
Ran for 15550 frames Cell Events: 487 mean_circ: 0.940419
Ran for 16550 frames Cell Events: 508 mean_circ: 0.940923
Ran for 19550 frames Cell Events: 592 mean_circ: 0.940548
Ran for 20050 frames Cell Events: 609 mean_circ: 0.940963
Ran for 20550 frames Cell Events: 622 mean_circ: 0.941263
Ran for 21050 frames Cell Events: 639 mean_circ: 0.940968
Ran for 21550 frames Cell Events: 648 mean_circ: 0.941392
Ran for 22050 frames Cell Events: 654 mean_circ: 0.940957
Ran for 22550 frames Cell Events: 671 mean_circ: 0.940869
Ran for 23050 frames Cell Events: 684 mean_circ: 0.940833
Ran for 24050 frames Cell Events: 711 mean_circ: 0.94087
Ran for 25050 frames Cell Events: 742 mean_circ: 0.941086
Ran for 25550 frames Cell Events: 761 mean_circ: 0.941503
Ran for 26050 frames Cell Events: 773 mean_circ: 0.941683
Ran for 26550 frames Cell Events: 784 mean_circ: 0.94181
Ran for 27050 frames Cell Events: 802 mean_circ: 0.941793
Ran for 27550 frames Cell Events: 811 mean_circ: 0.941556
Ran for 28050 frames Cell Events: 823 mean_circ: 0.94173
Ran for 29550 frames Cell Events: 896 mean_circ: 0.941858
Ran for 30050 frames Cell Events: 914 mean_circ: 0.941732
Ran for 31050 frames Cell Events: 948 mean_circ: 0.942109
Ran for 32050 frames Cell Events: 975 mean_circ: 0.941951
Ran for 32550 frames Cell Events: 991 mean_circ: 0.942222
Ran for 33050 frames Cell Events: 1008 mean_circ: 0.94243
Ran for 33550 frames Cell Events: 1024 mean_circ: 0.942432
Ran for 34050 frames Cell Events: 1045 mean_circ: 0.942569
Ran for 35050 frames Cell Events: 1073 mean_circ: 0.942873
Ran for 35550 frames Cell Events: 1085 mean_circ: 0.942906
Ran for 36550 frames Cell Events: 1120 mean_circ: 0.943046
Ran for 37050 frames Cell Events: 1129 mean_circ: 0.943093
Ran for 37550 frames Cell Events: 1148 mean_circ: 0.943074
Ran for 38050 frames Cell Events: 1164 mean_circ: 0.943188
Ran for 40050 frames Cell Events: 1238 mean_circ: 0.943499
Ran for 40550 frames Cell Events: 1251 mean_circ: 0.943558
Ran for 41050 frames Cell Events: 1270 mean_circ: 0.943558
Ran for 42550 frames Cell Events: 1311 mean_circ: 0.943573
Ran for 43050 frames Cell Events: 1335 mean_circ: 0.943453
Ran for 46550 frames Cell Events: 1484 mean_circ: 0.943293
Ran for 47050 frames Cell Events: 1504 mean_circ: 0.943076
Ran for 47550 frames Cell Events: 1526 mean_circ: 0.943035
Ran for 48050 frames Cell Events: 1559 mean_circ: 0.94306
Ran for 48550 frames Cell Events: 1581 mean_circ: 0.94335
Ran for 49050 frames Cell Events: 1603 mean_circ: 0.943395
Ran for 51050 frames Cell Events: 1670 mean_circ: 0.943597
Ran for 52050 frames Cell Events: 1696 mean_circ: 0.943653
Ran for 52550 frames Cell Events: 1711 mean_circ: 0.943705
Ran for 53050 frames Cell Events: 1733 mean_circ: 0.943523
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Ran for 54050 frames Cell Events: 1776 mean_circ: 0.943545
Ran for 54550 frames Cell Events: 1796 mean_circ: 0.943619
Ran for 55050 frames Cell Events: 1808 mean_circ: 0.943649
Ran for 55550 frames Cell Events: 1829 mean_circ: 0.943666
Ran for 56050 frames Cell Events: 1846 mean_circ: 0.943785
Ran for 57050 frames Cell Events: 1886 mean_circ: 0.943618
Ran for 57550 frames Cell Events: 1902 mean_circ: 0.943564
Ran for 58050 frames Cell Events: 1919 mean_circ: 0.94356
Ran for 59050 frames Cell Events: 1949 mean_circ: 0.943415
Ran for 59550 frames Cell Events: 1964 mean_circ: 0.94345
Ran for 60050 frames Cell Events: 1980 mean_circ: 0.943395
Ran for 60550 frames Cell Events: 1996 mean_circ: 0.943477
Ran for 61050 frames Cell Events: 2003 mean_circ: 0.943437
Ran for 62050 frames Cell Events: 2036 mean_circ: 0.943512
Ran for 62550 frames Cell Events: 2056 mean_circ: 0.943623
Ran for 63550 frames Cell Events: 2096 mean_circ: 0.943714
Ran for 64050 frames Cell Events: 2112 mean_circ: 0.943569
Ran for 64550 frames Cell Events: 2121 mean_circ: 0.943548
Ran for 65050 frames Cell Events: 2137 mean_circ: 0.943566
Ran for 65550 frames Cell Events: 2157 mean_circ: 0.943627
Ran for 66050 frames Cell Events: 2174 mean_circ: 0.943555
Ran for 66550 frames Cell Events: 2195 mean_circ: 0.943609
Ran for 67550 frames Cell Events: 2222 mean_circ: 0.943605
Ran for 68050 frames Cell Events: 2238 mean_circ: 0.943445
Ran for 68550 frames Cell Events: 2256 mean_circ: 0.943529
Ran for 69050 frames Cell Events: 2275 mean_circ: 0.94351
Ran for 69550 frames Cell Events: 2291 mean_circ: 0.943524
Ran for 70050 frames Cell Events: 2310 mean_circ: 0.943574
Ran for 71050 frames Cell Events: 2346 mean_circ: 0.943347
Ran for 72050 frames Cell Events: 2379 mean_circ: 0.943368
Ran for 72550 frames Cell Events: 2387 mean_circ: 0.943272
Ran for 73050 frames Cell Events: 2408 mean_circ: 0.943356
Ran for 73550 frames Cell Events: 2426 mean_circ: 0.943313
Ran for 74050 frames Cell Events: 2442 mean_circ: 0.943322
Ran for 74550 frames Cell Events: 2454 mean_circ: 0.943385
Ran for 75050 frames Cell Events: 2470 mean_circ: 0.943407
Ran for 75550 frames Cell Events: 2480 mean_circ: 0.943422
Ran for 76050 frames Cell Events: 2490 mean_circ: 0.94347
Ran for 76550 frames Cell Events: 2505 mean_circ: 0.943466
Ran for 77050 frames Cell Events: 2521 mean_circ: 0.943525
Ran for 77550 frames Cell Events: 2536 mean_circ: 0.943577
Ran for 80050 frames Cell Events: 2628 mean_circ: 0.943538
Ran for 81550 frames Cell Events: 2679 mean_circ: 0.943587
Ran for 82550 frames Cell Events: 2708 mean_circ: 0.943419
Ran for 83050 frames Cell Events: 2733 mean_circ: 0.943481
Ran for 84550 frames Cell Events: 2777 mean_circ: 0.94348
Ran for 85550 frames Cell Events: 2805 mean_circ: 0.943559
Ran for 86050 frames Cell Events: 2821 mean_circ: 0.943623
Ran for 86550 frames Cell Events: 2838 mean_circ: 0.943579
Ran for 87550 frames Cell Events: 2870 mean_circ: 0.943586
Ran for 88050 frames Cell Events: 2884 mean_circ: 0.943616
Ran for 88550 frames Cell Events: 2903 mean_circ: 0.943667
Ran for 89050 frames Cell Events: 2916 mean_circ: 0.94375
Ran for 89550 frames Cell Events: 2932 mean_circ: 0.94385
Ran for 90050 frames Cell Events: 2953 mean_circ: 0.943697
Ran for 91050 frames Cell Events: 2993 mean_circ: 0.943621
Ran for 92550 frames Cell Events: 3049 mean_circ: 0.943492
Ran for 93550 frames Cell Events: 3068 mean_circ: 0.943525
Ran for 94050 frames Cell Events: 3084 mean_circ: 0.943481
Ran for 95550 frames Cell Events: 3126 mean_circ: 0.94349
Ran for 96050 frames Cell Events: 3144 mean_circ: 0.94341
Ran for 96550 frames Cell Events: 3159 mean_circ: 0.94341
Ran for 97050 frames Cell Events: 3168 mean_circ: 0.943429
Ran for 98050 frames Cell Events: 3201 mean_circ: 0.943475
Ran for 98550 frames Cell Events: 3217 mean_circ: 0.9436
Ran for 99050 frames Cell Events: 3244 mean_circ: 0.943601
Ran for 99550 frames Cell Events: 3261 mean_circ: 0.943548
Ran for 100050 frames Cell Events: 3272 mean_circ: 0.943584
Ran for 100550 frames Cell Events: 3287 mean_circ: 0.943591
Ran for 101050 frames Cell Events: 3303 mean_circ: 0.943631
Ran for 101550 frames Cell Events: 3311 mean_circ: 0.943638
Ran for 102050 frames Cell Events: 3326 mean_circ: 0.943647
Ran for 103050 frames Cell Events: 3359 mean_circ: 0.943664
Ran for 103550 frames Cell Events: 3376 mean_circ: 0.943657
Ran for 104050 frames Cell Events: 3389 mean_circ: 0.943654
Ran for 104550 frames Cell Events: 3402 mean_circ: 0.943675
Ran for 105550 frames Cell Events: 3433 mean_circ: 0.943709
Ran for 106050 frames Cell Events: 3450 mean_circ: 0.943752
Ran for 106550 frames Cell Events: 3469 mean_circ: 0.943753
Ran for 107050 frames Cell Events: 3487 mean_circ: 0.943774
Ran for 107550 frames Cell Events: 3500 mean_circ: 0.943838
Ran for 108050 frames Cell Events: 3513 mean_circ: 0.943867
Ran for 108550 frames Cell Events: 3526 mean_circ: 0.943882
Ran for 109050 frames Cell Events: 3541 mean_circ: 0.943797
Ran for 109550 frames Cell Events: 3556 mean_circ: 0.943727
Ran for 110050 frames Cell Events: 3574 mean_circ: 0.943739
Ran for 110550 frames Cell Events: 3587 mean_circ: 0.9438
Ran for 112550 frames Cell Events: 3647 mean_circ: 0.943884
Ran for 113050 frames Cell Events: 3661 mean_circ: 0.943889
Ran for 114050 frames Cell Events: 3699 mean_circ: 0.943929
Ran for 114550 frames Cell Events: 3719 mean_circ: 0.943899
Ran for 115050 frames Cell Events: 3737 mean_circ: 0.943808
Ran for 115550 frames Cell Events: 3749 mean_circ: 0.943855
Ran for 116050 frames Cell Events: 3765 mean_circ: 0.943786
Ran for 117050 frames Cell Events: 3797 mean_circ: 0.943779
Ran for 118550 frames Cell Events: 3847 mean_circ: 0.943807
Ran for 119550 frames Cell Events: 3895 mean_circ: 0.943731
Ran for 120050 frames Cell Events: 3913 mean_circ: 0.943587
Ran for 120550 frames Cell Events: 3930 mean_circ: 0.94362
Ran for 121050 frames Cell Events: 3938 mean_circ: 0.943626
Ran for 121550 frames Cell Events: 3956 mean_circ: 0.943691
Ran for 122050 frames Cell Events: 3971 mean_circ: 0.943665
Ran for 123050 frames Cell Events: 4002 mean_circ: 0.943748
Ran for 123550 frames Cell Events: 4017 mean_circ: 0.943755
Ran for 124050 frames Cell Events: 4029 mean_circ: 0.943704
Ran for 124550 frames Cell Events: 4051 mean_circ: 0.943741
Ran for 125050 frames Cell Events: 4065 mean_circ: 0.94373
Ran for 125550 frames Cell Events: 4076 mean_circ: 0.943761
Ran for 127050 frames Cell Events: 4129 mean_circ: 0.943887
Ran for 128050 frames Cell Events: 4186 mean_circ: 0.943887
Ran for 128550 frames Cell Events: 4218 mean_circ: 0.943946
Ran for 129550 frames Cell Events: 4264 mean_circ: 0.943889
Ran for 130050 frames Cell Events: 4288 mean_circ: 0.94387
Ran for 130550 frames Cell Events: 4309 mean_circ: 0.943908
Ran for 131550 frames Cell Events: 4339 mean_circ: 0.943906
Ran for 132050 frames Cell Events: 4354 mean_circ: 0.943905
Ran for 132550 frames Cell Events: 4381 mean_circ: 0.943894
Ran for 133050 frames Cell Events: 4389 mean_circ: 0.943849
Ran for 133550 frames Cell Events: 4407 mean_circ: 0.943824
Ran for 134050 frames Cell Events: 4421 mean_circ: 0.943827
Ran for 135050 frames Cell Events: 4463 mean_circ: 0.943903
Ran for 137050 frames Cell Events: 4551 mean_circ: 0.944005
Ran for 137550 frames Cell Events: 4576 mean_circ: 0.944034
Ran for 138550 frames Cell Events: 4610 mean_circ: 0.944014
Ran for 139050 frames Cell Events: 4624 mean_circ: 0.944014
Ran for 140050 frames Cell Events: 4657 mean_circ: 0.944034
Ran for 140550 frames Cell Events: 4679 mean_circ: 0.944095
Ran for 141550 frames Cell Events: 4714 mean_circ: 0.944074
Ran for 142050 frames Cell Events: 4733 mean_circ: 0.944018
Ran for 142550 frames Cell Events: 4758 mean_circ: 0.944036
Ran for 143050 frames Cell Events: 4783 mean_circ: 0.944061
Ran for 143550 frames Cell Events: 4799 mean_circ: 0.9441
Ran for 144550 frames Cell Events: 4840 mean_circ: 0.944045
Ran for 145050 frames Cell Events: 4856 mean_circ: 0.944012
Ran for 146050 frames Cell Events: 4888 mean_circ: 0.944016
Ran for 146550 frames Cell Events: 4903 mean_circ: 0.944054
Ran for 147050 frames Cell Events: 4918 mean_circ: 0.944097
Ran for 147550 frames Cell Events: 4937 mean_circ: 0.944106
Ran for 148050 frames Cell Events: 4950 mean_circ: 0.944086
Ran for 149550 frames Cell Events: 5000 mean_circ: 0.944092
Ran for 150050 frames Cell Events: 5020 mean_circ: 0.94409
Ran for 151550 frames Cell Events: 5109 mean_circ: 0.944017
Ran for 152050 frames Cell Events: 5125 mean_circ: 0.944042
Ran for 152550 frames Cell Events: 5140 mean_circ: 0.944082
Ran for 153050 frames Cell Events: 5157 mean_circ: 0.944062
Ran for 153550 frames Cell Events: 5180 mean_circ: 0.944085
Ran for 154550 frames Cell Events: 5224 mean_circ: 0.944079
Ran for 155050 frames Cell Events: 5242 mean_circ: 0.944047
Ran for 155550 frames Cell Events: 5260 mean_circ: 0.944069
Ran for 156050 frames Cell Events: 5274 mean_circ: 0.944099
Ran for 157050 frames Cell Events: 5305 mean_circ: 0.944106
Ran for 158050 frames Cell Events: 5346 mean_circ: 0.944055
Ran for 158550 frames Cell Events: 5362 mean_circ: 0.944077
Ran for 159050 frames Cell Events: 5382 mean_circ: 0.944115
Ran for 159550 frames Cell Events: 5397 mean_circ: 0.944139
Ran for 160550 frames Cell Events: 5426 mean_circ: 0.944166
Ran for 161550 frames Cell Events: 5456 mean_circ: 0.944215
Ran for 162050 frames Cell Events: 5476 mean_circ: 0.944265
Ran for 163050 frames Cell Events: 5511 mean_circ: 0.944261
Ran for 163550 frames Cell Events: 5528 mean_circ: 0.944252
Ran for 164550 frames Cell Events: 5574 mean_circ: 0.94426
Ran for 165050 frames Cell Events: 5587 mean_circ: 0.944242
Ran for 165550 frames Cell Events: 5608 mean_circ: 0.944222
Ran for 166050 frames Cell Events: 5627 mean_circ: 0.944233
Ran for 166550 frames Cell Events: 5653 mean_circ: 0.944212
Ran for 167050 frames Cell Events: 5667 mean_circ: 0.944228
Ran for 167550 frames Cell Events: 5684 mean_circ: 0.944223
Ran for 168050 frames Cell Events: 5706 mean_circ: 0.944221
Ran for 168550 frames Cell Events: 5721 mean_circ: 0.944192
Ran for 169550 frames Cell Events: 5759 mean_circ: 0.944233
Ran for 170050 frames Cell Events: 5778 mean_circ: 0.944293
Ran for 170550 frames Cell Events: 5789 mean_circ: 0.944279
Ran for 171550 frames Cell Events: 5824 mean_circ: 0.944346
Ran for 172050 frames Cell Events: 5846 mean_circ: 0.944347
Ran for 173050 frames Cell Events: 5884 mean_circ: 0.944372
Ran for 173550 frames Cell Events: 5906 mean_circ: 0.94436
Ran for 174550 frames Cell Events: 5938 mean_circ: 0.944431
Ran for 175050 frames Cell Events: 5963 mean_circ: 0.944404
Ran for 176050 frames Cell Events: 5999 mean_circ: 0.944345
Ran for 177550 frames Cell Events: 6036 mean_circ: 0.944334
Ran for 178050 frames Cell Events: 6051 mean_circ: 0.944332
Ran for 178550 frames Cell Events: 6071 mean_circ: 0.944338
Ran for 179050 frames Cell Events: 6086 mean_circ: 0.944354
Ran for 179550 frames Cell Events: 6106 mean_circ: 0.944353
Ran for 180050 frames Cell Events: 6122 mean_circ: 0.944364
Ran for 180550 frames Cell Events: 6136 mean_circ: 0.944347
Ran for 181050 frames Cell Events: 6148 mean_circ: 0.944307
Ran for 181550 frames Cell Events: 6167 mean_circ: 0.944317
Ran for 182550 frames Cell Events: 6222 mean_circ: 0.944311
Ran for 183050 frames Cell Events: 6238 mean_circ: 0.94431
Ran for 185050 frames Cell Events: 6310 mean_circ: 0.944301
Ran for 186050 frames Cell Events: 6347 mean_circ: 0.944259
Ran for 186550 frames Cell Events: 6362 mean_circ: 0.944221
Ran for 187050 frames Cell Events: 6380 mean_circ: 0.944171
Ran for 187550 frames Cell Events: 6402 mean_circ: 0.944182
Ran for 189050 frames Cell Events: 6456 mean_circ: 0.944215
Ran for 190550 frames Cell Events: 6510 mean_circ: 0.944237
Ran for 191050 frames Cell Events: 6532 mean_circ: 0.9443
Ran for 191550 frames Cell Events: 6551 mean_circ: 0.944336
Ran for 192550 frames Cell Events: 6594 mean_circ: 0.944394
Ran for 193050 frames Cell Events: 6611 mean_circ: 0.9444
Ran for 194050 frames Cell Events: 6643 mean_circ: 0.944372
Ran for 194550 frames Cell Events: 6664 mean_circ: 0.944354
Ran for 196050 frames Cell Events: 6712 mean_circ: 0.944341
Ran for 197550 frames Cell Events: 6781 mean_circ: 0.944321
Ran for 198050 frames Cell Events: 6796 mean_circ: 0.944298
Ran for 199550 frames Cell Events: 6853 mean_circ: 0.944376
Ran for 200050 frames Cell Events: 6868 mean_circ: 0.944382
Ran for 200550 frames Cell Events: 6887 mean_circ: 0.944381
Ran for 201050 frames Cell Events: 6907 mean_circ: 0.94437
Ran for 201550 frames Cell Events: 6927 mean_circ: 0.944397
Ran for 202050 frames Cell Events: 6941 mean_circ: 0.944401
Ran for 202550 frames Cell Events: 6949 mean_circ: 0.944384
Ran for 203050 frames Cell Events: 6964 mean_circ: 0.94438
Ran for 204050 frames Cell Events: 7012 mean_circ: 0.944375
Ran for 204550 frames Cell Events: 7029 mean_circ: 0.944401
Ran for 205050 frames Cell Events: 7043 mean_circ: 0.944411
Ran for 205550 frames Cell Events: 7056 mean_circ: 0.944375
Ran for 206050 frames Cell Events: 7073 mean_circ: 0.944367
Ran for 206550 frames Cell Events: 7082 mean_circ: 0.944387
Ran for 207050 frames Cell Events: 7099 mean_circ: 0.94443
Ran for 208050 frames Cell Events: 7132 mean_circ: 0.944446
Ran for 209550 frames Cell Events: 7188 mean_circ: 0.944421
Ran for 210050 frames Cell Events: 7213 mean_circ: 0.944421
Ran for 212050 frames Cell Events: 7265 mean_circ: 0.944434
Ran for 213050 frames Cell Events: 7286 mean_circ: 0.944464
Ran for 213550 frames Cell Events: 7304 mean_circ: 0.944407
Ran for 214050 frames Cell Events: 7324 mean_circ: 0.944442
Ran for 214550 frames Cell Events: 7343 mean_circ: 0.94443
Ran for 215050 frames Cell Events: 7355 mean_circ: 0.944436
Ran for 215550 frames Cell Events: 7380 mean_circ: 0.94444
Ran for 216050 frames Cell Events: 7391 mean_circ: 0.944432
Ran for 217050 frames Cell Events: 7428 mean_circ: 0.944473
Ran for 218050 frames Cell Events: 7457 mean_circ: 0.944488
Ran for 218550 frames Cell Events: 7481 mean_circ: 0.944497
Ran for 219550 frames Cell Events: 7518 mean_circ: 0.944505
Ran for 220050 frames Cell Events: 7528 mean_circ: 0.944529
Ran for 220550 frames Cell Events: 7548 mean_circ: 0.944549
Ran for 222550 frames Cell Events: 7633 mean_circ: 0.94463
Ran for 223050 frames Cell Events: 7646 mean_circ: 0.944635
Ran for 224050 frames Cell Events: 7681 mean_circ: 0.944632
Ran for 225550 frames Cell Events: 7754 mean_circ: 0.944613
Ran for 226050 frames Cell Events: 7766 mean_circ: 0.944641
Ran for 226550 frames Cell Events: 7786 mean_circ: 0.944654
Ran for 227050 frames Cell Events: 7807 mean_circ: 0.944636
Ran for 228550 frames Cell Events: 7863 mean_circ: 0.944654
Ran for 229550 frames Cell Events: 7896 mean_circ: 0.94461
Ran for 230050 frames Cell Events: 7918 mean_circ: 0.944624
Ran for 230550 frames Cell Events: 7933 mean_circ: 0.944631
Ran for 231050 frames Cell Events: 7953 mean_circ: 0.94465
Ran for 231550 frames Cell Events: 7963 mean_circ: 0.944664
Ran for 232050 frames Cell Events: 7984 mean_circ: 0.944659
Ran for 232550 frames Cell Events: 7994 mean_circ: 0.944681



End this measurment..



Stopping time: 2.18096e+009
****************************************
Measurement finished

Mean Circularitiy: 0.94468
Mean Area: 662.848
Mean FL-1 intensity: 3502.23
Mean FL-2 intensity: 4349.15
Mean FL-3 intensity: 0

frames processed: 232497
Total Time: 116410ms
Number of Runs (new bg img) 0
Frames collected: 232697
Skipped frames: 26503
Rescued Frames: 2441952
Samples DAQ: 58175472
Samples written: 116348238
Samples per Channel: 58174119
FPS: 1998.93

Samples per second: 499733
Expected samples/s: 500000

Events: 8000
Events per second: 68.7223
jumped back (PMT): 4707
#Frames read, frequency
# 0 frames :330159
# 1 frames :116872
# 2 frames :5461
# 3 frames :1946
# 4 frames :1223
# 5 frames :535
# 6 frames :999
# 7 frames :2112
# 8 frames :1051
# 9 frames :785
# 10 frames :1118
# 11 frames :983
# 12 frames :643
# 13 frames :330
# 14 frames :175
# 15 frames :155
# 16 frames :135
# 17 frames :132
# 18 frames :114
# 19 frames :83
# 20 frames :56
# 21 frames :51
# 22 frames :42
# 23 frames :32
# 24 frames :32
# 25 frames :17
# 26 frames :25
# 27 frames :8
# 28 frames :9
# 29 frames :17
# 30 frames :6
# 31 frames :7
# 32 frames :6
# 33 frames :6
# 34 frames :3
# 35 frames :2
# 36 frames :3
# 37 frames :2
# 38 frames :6
# 41 frames :2
# 42 frames :1
# 45 frames :1
# 47 frames :1
# 55 frames :1
# 68 frames :1
# 77 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.2705
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0