Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_15.29.21 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "acfff7229b4283087f0c08c8225ea20f",
"name": "M1_20170609_1520_dsRNA_Y7_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "13:29:42"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8351 (max 8352) in '8351'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.6192
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.18502e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 13 mean_circ: 0.934358
Ran for 1050 frames Cell Events: 21 mean_circ: 0.93569
Ran for 1550 frames Cell Events: 35 mean_circ: 0.932248
Ran for 2050 frames Cell Events: 48 mean_circ: 0.937541
Ran for 2550 frames Cell Events: 62 mean_circ: 0.93241
Ran for 3550 frames Cell Events: 85 mean_circ: 0.928488
Ran for 4050 frames Cell Events: 96 mean_circ: 0.930816
Ran for 5050 frames Cell Events: 122 mean_circ: 0.932224
Ran for 6050 frames Cell Events: 152 mean_circ: 0.9329
Ran for 7050 frames Cell Events: 190 mean_circ: 0.9328
Ran for 7550 frames Cell Events: 219 mean_circ: 0.930763
Ran for 8550 frames Cell Events: 250 mean_circ: 0.928534
Ran for 9050 frames Cell Events: 272 mean_circ: 0.928849
Ran for 10050 frames Cell Events: 288 mean_circ: 0.929471
Ran for 10550 frames Cell Events: 306 mean_circ: 0.929266
Ran for 11050 frames Cell Events: 320 mean_circ: 0.929406
Ran for 12550 frames Cell Events: 362 mean_circ: 0.929217
Ran for 13050 frames Cell Events: 372 mean_circ: 0.929764
Ran for 13550 frames Cell Events: 378 mean_circ: 0.929981
Ran for 14550 frames Cell Events: 397 mean_circ: 0.93099
Ran for 15050 frames Cell Events: 404 mean_circ: 0.930954
Ran for 15550 frames Cell Events: 412 mean_circ: 0.931344
Ran for 16050 frames Cell Events: 419 mean_circ: 0.931501
Ran for 16550 frames Cell Events: 430 mean_circ: 0.931698
Ran for 17050 frames Cell Events: 441 mean_circ: 0.931751
Ran for 17550 frames Cell Events: 455 mean_circ: 0.931771
Ran for 18050 frames Cell Events: 463 mean_circ: 0.931985
Ran for 18550 frames Cell Events: 473 mean_circ: 0.932519
Ran for 19050 frames Cell Events: 478 mean_circ: 0.932754
Ran for 20050 frames Cell Events: 493 mean_circ: 0.932922
Ran for 20550 frames Cell Events: 506 mean_circ: 0.933247
Ran for 21550 frames Cell Events: 522 mean_circ: 0.933463
Ran for 22050 frames Cell Events: 530 mean_circ: 0.933692
Ran for 22550 frames Cell Events: 542 mean_circ: 0.933833
Ran for 23050 frames Cell Events: 556 mean_circ: 0.934196
Ran for 23550 frames Cell Events: 570 mean_circ: 0.93451
Ran for 25050 frames Cell Events: 608 mean_circ: 0.934979
Ran for 25550 frames Cell Events: 617 mean_circ: 0.935276
Ran for 26050 frames Cell Events: 620 mean_circ: 0.934902
Ran for 26550 frames Cell Events: 630 mean_circ: 0.934975
Ran for 27550 frames Cell Events: 660 mean_circ: 0.935248
Ran for 28050 frames Cell Events: 671 mean_circ: 0.935634
Ran for 28550 frames Cell Events: 682 mean_circ: 0.935416
Ran for 29050 frames Cell Events: 693 mean_circ: 0.935514
Ran for 29550 frames Cell Events: 707 mean_circ: 0.93592
Ran for 30050 frames Cell Events: 718 mean_circ: 0.935808
Ran for 32550 frames Cell Events: 774 mean_circ: 0.936336
Ran for 33050 frames Cell Events: 781 mean_circ: 0.936368
Ran for 34550 frames Cell Events: 820 mean_circ: 0.93595
Ran for 35050 frames Cell Events: 830 mean_circ: 0.935345
Ran for 35550 frames Cell Events: 842 mean_circ: 0.935347
Ran for 36050 frames Cell Events: 854 mean_circ: 0.935661
Ran for 37550 frames Cell Events: 891 mean_circ: 0.935698
Ran for 38050 frames Cell Events: 901 mean_circ: 0.935393
Ran for 39050 frames Cell Events: 927 mean_circ: 0.935426
Ran for 39550 frames Cell Events: 949 mean_circ: 0.935458
Ran for 40550 frames Cell Events: 978 mean_circ: 0.935491
Ran for 41050 frames Cell Events: 986 mean_circ: 0.93537
Ran for 42050 frames Cell Events: 1001 mean_circ: 0.935415
Ran for 42550 frames Cell Events: 1008 mean_circ: 0.935311
Ran for 43550 frames Cell Events: 1025 mean_circ: 0.935305
Ran for 44050 frames Cell Events: 1034 mean_circ: 0.935291
Ran for 44550 frames Cell Events: 1043 mean_circ: 0.935307
Ran for 45050 frames Cell Events: 1048 mean_circ: 0.935382
Ran for 45550 frames Cell Events: 1060 mean_circ: 0.935174
Ran for 46050 frames Cell Events: 1066 mean_circ: 0.935323
Ran for 46550 frames Cell Events: 1076 mean_circ: 0.935354
Ran for 47050 frames Cell Events: 1085 mean_circ: 0.935228
Ran for 47550 frames Cell Events: 1096 mean_circ: 0.934943
Ran for 48050 frames Cell Events: 1111 mean_circ: 0.935093
Ran for 49050 frames Cell Events: 1135 mean_circ: 0.934705
Ran for 49550 frames Cell Events: 1138 mean_circ: 0.934748
Ran for 50050 frames Cell Events: 1148 mean_circ: 0.934925
Ran for 50550 frames Cell Events: 1164 mean_circ: 0.934949
Ran for 51050 frames Cell Events: 1172 mean_circ: 0.934769
Ran for 52050 frames Cell Events: 1198 mean_circ: 0.934702
Ran for 52550 frames Cell Events: 1206 mean_circ: 0.93477
Ran for 53050 frames Cell Events: 1215 mean_circ: 0.934818
Ran for 54050 frames Cell Events: 1238 mean_circ: 0.934717
Ran for 54550 frames Cell Events: 1244 mean_circ: 0.934611
Ran for 56550 frames Cell Events: 1294 mean_circ: 0.934413
Ran for 57550 frames Cell Events: 1322 mean_circ: 0.934375
Ran for 58050 frames Cell Events: 1337 mean_circ: 0.934091
Ran for 59050 frames Cell Events: 1372 mean_circ: 0.933707
Ran for 59550 frames Cell Events: 1393 mean_circ: 0.933562
Ran for 60050 frames Cell Events: 1410 mean_circ: 0.93387
Ran for 60550 frames Cell Events: 1418 mean_circ: 0.933946
Ran for 61050 frames Cell Events: 1428 mean_circ: 0.934071
Ran for 62050 frames Cell Events: 1448 mean_circ: 0.933868
Ran for 62550 frames Cell Events: 1458 mean_circ: 0.933997
Ran for 63050 frames Cell Events: 1465 mean_circ: 0.933973
Ran for 63550 frames Cell Events: 1482 mean_circ: 0.933931
Ran for 65550 frames Cell Events: 1549 mean_circ: 0.933886
Ran for 67550 frames Cell Events: 1614 mean_circ: 0.933974
Ran for 68550 frames Cell Events: 1646 mean_circ: 0.933737
Ran for 69050 frames Cell Events: 1659 mean_circ: 0.933774
Ran for 69550 frames Cell Events: 1676 mean_circ: 0.93368
Ran for 70050 frames Cell Events: 1689 mean_circ: 0.933763
Ran for 71050 frames Cell Events: 1710 mean_circ: 0.933726
Ran for 71550 frames Cell Events: 1719 mean_circ: 0.933673
Ran for 72550 frames Cell Events: 1733 mean_circ: 0.933655
Ran for 73550 frames Cell Events: 1757 mean_circ: 0.933587
Ran for 74050 frames Cell Events: 1773 mean_circ: 0.933606
Ran for 74550 frames Cell Events: 1784 mean_circ: 0.933755
Ran for 75050 frames Cell Events: 1790 mean_circ: 0.933781
Ran for 75550 frames Cell Events: 1798 mean_circ: 0.933827
Ran for 76050 frames Cell Events: 1807 mean_circ: 0.933852
Ran for 76550 frames Cell Events: 1816 mean_circ: 0.933854
Ran for 77050 frames Cell Events: 1834 mean_circ: 0.933636
Ran for 77550 frames Cell Events: 1851 mean_circ: 0.933667
Ran for 78050 frames Cell Events: 1861 mean_circ: 0.93371
Ran for 78550 frames Cell Events: 1874 mean_circ: 0.933774
Ran for 79050 frames Cell Events: 1883 mean_circ: 0.93383
Ran for 80050 frames Cell Events: 1910 mean_circ: 0.933856
Ran for 80550 frames Cell Events: 1921 mean_circ: 0.933905
Ran for 81050 frames Cell Events: 1935 mean_circ: 0.933978
Ran for 81550 frames Cell Events: 1940 mean_circ: 0.933947
Ran for 82050 frames Cell Events: 1961 mean_circ: 0.933988
Ran for 82550 frames Cell Events: 1973 mean_circ: 0.934051
Ran for 83550 frames Cell Events: 2001 mean_circ: 0.934019
Ran for 84050 frames Cell Events: 2014 mean_circ: 0.934076
Ran for 84550 frames Cell Events: 2028 mean_circ: 0.933968
Ran for 85550 frames Cell Events: 2055 mean_circ: 0.933814
Ran for 86050 frames Cell Events: 2060 mean_circ: 0.933771
Ran for 86550 frames Cell Events: 2070 mean_circ: 0.933705
Ran for 87050 frames Cell Events: 2083 mean_circ: 0.933713
Ran for 87550 frames Cell Events: 2097 mean_circ: 0.933575
Ran for 88050 frames Cell Events: 2120 mean_circ: 0.933333
Ran for 88550 frames Cell Events: 2126 mean_circ: 0.933404
Ran for 89050 frames Cell Events: 2132 mean_circ: 0.93342
Ran for 91550 frames Cell Events: 2186 mean_circ: 0.933213
Ran for 92050 frames Cell Events: 2191 mean_circ: 0.93313
Ran for 92550 frames Cell Events: 2197 mean_circ: 0.93308
Ran for 93050 frames Cell Events: 2210 mean_circ: 0.933053
Ran for 94050 frames Cell Events: 2226 mean_circ: 0.933072
Ran for 94550 frames Cell Events: 2239 mean_circ: 0.933181
Ran for 95050 frames Cell Events: 2251 mean_circ: 0.933124
Ran for 95550 frames Cell Events: 2260 mean_circ: 0.933064
Ran for 96550 frames Cell Events: 2278 mean_circ: 0.933016
Ran for 97050 frames Cell Events: 2289 mean_circ: 0.932984
Ran for 97550 frames Cell Events: 2303 mean_circ: 0.932838
Ran for 98050 frames Cell Events: 2313 mean_circ: 0.932868
Ran for 98550 frames Cell Events: 2326 mean_circ: 0.932913
Ran for 99050 frames Cell Events: 2339 mean_circ: 0.932848
Ran for 99550 frames Cell Events: 2348 mean_circ: 0.932841
Ran for 100050 frames Cell Events: 2363 mean_circ: 0.932863
Ran for 100550 frames Cell Events: 2380 mean_circ: 0.932826
Ran for 101050 frames Cell Events: 2389 mean_circ: 0.93272
Ran for 101550 frames Cell Events: 2400 mean_circ: 0.932788
Ran for 102550 frames Cell Events: 2425 mean_circ: 0.932723
Ran for 103050 frames Cell Events: 2435 mean_circ: 0.932495
Ran for 103550 frames Cell Events: 2438 mean_circ: 0.932352
Ran for 104050 frames Cell Events: 2445 mean_circ: 0.932313
Ran for 105050 frames Cell Events: 2472 mean_circ: 0.932183
Ran for 105550 frames Cell Events: 2480 mean_circ: 0.932022
Ran for 106050 frames Cell Events: 2497 mean_circ: 0.931853
Ran for 106550 frames Cell Events: 2503 mean_circ: 0.931838
Ran for 107050 frames Cell Events: 2509 mean_circ: 0.931839
Ran for 108550 frames Cell Events: 2555 mean_circ: 0.931817
Ran for 109050 frames Cell Events: 2563 mean_circ: 0.931729
Ran for 109550 frames Cell Events: 2576 mean_circ: 0.931816
Ran for 111050 frames Cell Events: 2624 mean_circ: 0.93185
Ran for 111550 frames Cell Events: 2639 mean_circ: 0.931789
Ran for 112050 frames Cell Events: 2656 mean_circ: 0.93187
Ran for 112550 frames Cell Events: 2680 mean_circ: 0.931649
Ran for 113550 frames Cell Events: 2711 mean_circ: 0.931543
Ran for 114050 frames Cell Events: 2723 mean_circ: 0.931513
Ran for 115050 frames Cell Events: 2743 mean_circ: 0.931474
Ran for 115550 frames Cell Events: 2757 mean_circ: 0.931451
Ran for 116050 frames Cell Events: 2771 mean_circ: 0.931386
Ran for 116550 frames Cell Events: 2792 mean_circ: 0.931494
Ran for 117550 frames Cell Events: 2821 mean_circ: 0.931474
Ran for 118550 frames Cell Events: 2851 mean_circ: 0.931466
Ran for 119050 frames Cell Events: 2857 mean_circ: 0.931455
Ran for 119550 frames Cell Events: 2864 mean_circ: 0.931475
Ran for 120050 frames Cell Events: 2875 mean_circ: 0.931517
Ran for 120550 frames Cell Events: 2885 mean_circ: 0.931505
Ran for 121550 frames Cell Events: 2911 mean_circ: 0.931397
Ran for 122050 frames Cell Events: 2921 mean_circ: 0.931341
Ran for 122550 frames Cell Events: 2937 mean_circ: 0.93134
Ran for 123050 frames Cell Events: 2958 mean_circ: 0.931302
Ran for 123550 frames Cell Events: 2972 mean_circ: 0.931322
Ran for 124050 frames Cell Events: 2989 mean_circ: 0.931368
Ran for 124550 frames Cell Events: 3001 mean_circ: 0.931352
Ran for 125050 frames Cell Events: 3013 mean_circ: 0.931311
Ran for 125550 frames Cell Events: 3033 mean_circ: 0.931277
Ran for 126050 frames Cell Events: 3045 mean_circ: 0.931304
Ran for 126550 frames Cell Events: 3058 mean_circ: 0.931322
Ran for 127550 frames Cell Events: 3088 mean_circ: 0.931336
Ran for 128050 frames Cell Events: 3095 mean_circ: 0.93134
Ran for 128550 frames Cell Events: 3103 mean_circ: 0.931336
Ran for 129050 frames Cell Events: 3114 mean_circ: 0.93137
Ran for 129550 frames Cell Events: 3128 mean_circ: 0.931359
Ran for 130050 frames Cell Events: 3140 mean_circ: 0.931395
Ran for 131050 frames Cell Events: 3169 mean_circ: 0.931357
Ran for 131550 frames Cell Events: 3182 mean_circ: 0.931267
Ran for 132050 frames Cell Events: 3195 mean_circ: 0.93123
Ran for 132550 frames Cell Events: 3201 mean_circ: 0.931201
Ran for 133550 frames Cell Events: 3222 mean_circ: 0.931302
Ran for 134050 frames Cell Events: 3235 mean_circ: 0.931277
Ran for 134550 frames Cell Events: 3244 mean_circ: 0.931245
Ran for 135050 frames Cell Events: 3254 mean_circ: 0.931177
Ran for 135550 frames Cell Events: 3268 mean_circ: 0.931119
Ran for 136050 frames Cell Events: 3274 mean_circ: 0.931171
Ran for 136550 frames Cell Events: 3287 mean_circ: 0.931192
Ran for 137050 frames Cell Events: 3296 mean_circ: 0.931174
Ran for 138050 frames Cell Events: 3323 mean_circ: 0.931145
Ran for 138550 frames Cell Events: 3336 mean_circ: 0.931174
Ran for 139050 frames Cell Events: 3354 mean_circ: 0.931197
Ran for 139550 frames Cell Events: 3370 mean_circ: 0.931237
Ran for 140050 frames Cell Events: 3385 mean_circ: 0.931168
Ran for 140550 frames Cell Events: 3397 mean_circ: 0.93114
Ran for 141050 frames Cell Events: 3411 mean_circ: 0.93111
Ran for 141550 frames Cell Events: 3424 mean_circ: 0.931078
Ran for 143050 frames Cell Events: 3483 mean_circ: 0.930935
Ran for 143550 frames Cell Events: 3494 mean_circ: 0.93087
Ran for 144550 frames Cell Events: 3517 mean_circ: 0.930715
Ran for 145550 frames Cell Events: 3532 mean_circ: 0.930652
Ran for 146050 frames Cell Events: 3546 mean_circ: 0.930596
Ran for 146550 frames Cell Events: 3570 mean_circ: 0.93055
Ran for 147050 frames Cell Events: 3584 mean_circ: 0.930407
Ran for 147550 frames Cell Events: 3593 mean_circ: 0.930327
Ran for 148050 frames Cell Events: 3603 mean_circ: 0.930304
Ran for 148550 frames Cell Events: 3624 mean_circ: 0.93025
Ran for 149050 frames Cell Events: 3634 mean_circ: 0.930297
Ran for 149550 frames Cell Events: 3643 mean_circ: 0.930279
Ran for 150050 frames Cell Events: 3657 mean_circ: 0.930254
Ran for 150550 frames Cell Events: 3662 mean_circ: 0.930258
Ran for 151050 frames Cell Events: 3669 mean_circ: 0.930239
Ran for 151550 frames Cell Events: 3685 mean_circ: 0.930203
Ran for 152050 frames Cell Events: 3701 mean_circ: 0.930201
Ran for 153050 frames Cell Events: 3720 mean_circ: 0.930247
Ran for 153550 frames Cell Events: 3736 mean_circ: 0.930243
Ran for 154550 frames Cell Events: 3764 mean_circ: 0.930179
Ran for 155550 frames Cell Events: 3793 mean_circ: 0.930042
Ran for 156050 frames Cell Events: 3807 mean_circ: 0.930003
Ran for 157550 frames Cell Events: 3844 mean_circ: 0.929901
Ran for 158050 frames Cell Events: 3856 mean_circ: 0.929981
Ran for 158550 frames Cell Events: 3876 mean_circ: 0.930115
Ran for 159050 frames Cell Events: 3888 mean_circ: 0.930154
Ran for 159550 frames Cell Events: 3909 mean_circ: 0.930067
Ran for 160050 frames Cell Events: 3918 mean_circ: 0.929983
Ran for 160550 frames Cell Events: 3930 mean_circ: 0.929994
Ran for 162050 frames Cell Events: 3976 mean_circ: 0.929792
Ran for 162550 frames Cell Events: 3990 mean_circ: 0.929781
Ran for 163050 frames Cell Events: 4003 mean_circ: 0.929829
Ran for 163550 frames Cell Events: 4014 mean_circ: 0.929841
Ran for 165050 frames Cell Events: 4052 mean_circ: 0.929936
Ran for 165550 frames Cell Events: 4061 mean_circ: 0.929922
Ran for 166050 frames Cell Events: 4074 mean_circ: 0.929832
Ran for 166550 frames Cell Events: 4083 mean_circ: 0.929776
Ran for 167050 frames Cell Events: 4102 mean_circ: 0.92981
Ran for 168050 frames Cell Events: 4138 mean_circ: 0.929829
Ran for 168550 frames Cell Events: 4150 mean_circ: 0.929831
Ran for 169050 frames Cell Events: 4158 mean_circ: 0.929792
Ran for 169550 frames Cell Events: 4175 mean_circ: 0.929773
Ran for 170050 frames Cell Events: 4185 mean_circ: 0.929773
Ran for 170550 frames Cell Events: 4206 mean_circ: 0.929739
Ran for 171050 frames Cell Events: 4228 mean_circ: 0.929741
Ran for 171550 frames Cell Events: 4241 mean_circ: 0.929722
Ran for 172550 frames Cell Events: 4274 mean_circ: 0.929802
Ran for 173050 frames Cell Events: 4285 mean_circ: 0.929668
Ran for 175050 frames Cell Events: 4361 mean_circ: 0.929649
Ran for 175550 frames Cell Events: 4369 mean_circ: 0.929666
Ran for 176050 frames Cell Events: 4387 mean_circ: 0.929695
Ran for 176550 frames Cell Events: 4398 mean_circ: 0.929653
Ran for 177050 frames Cell Events: 4412 mean_circ: 0.929586
Ran for 177550 frames Cell Events: 4426 mean_circ: 0.929608
Ran for 178550 frames Cell Events: 4456 mean_circ: 0.929581
Ran for 179050 frames Cell Events: 4475 mean_circ: 0.92961
Ran for 180050 frames Cell Events: 4500 mean_circ: 0.929568
Ran for 181550 frames Cell Events: 4538 mean_circ: 0.929571
Ran for 183050 frames Cell Events: 4591 mean_circ: 0.929662
Ran for 183550 frames Cell Events: 4601 mean_circ: 0.929637
Ran for 184050 frames Cell Events: 4613 mean_circ: 0.929623
Ran for 185050 frames Cell Events: 4651 mean_circ: 0.929545
Ran for 186550 frames Cell Events: 4687 mean_circ: 0.929593
Ran for 187050 frames Cell Events: 4698 mean_circ: 0.929612
Ran for 187550 frames Cell Events: 4708 mean_circ: 0.929657
Ran for 188050 frames Cell Events: 4718 mean_circ: 0.929675
Ran for 189050 frames Cell Events: 4755 mean_circ: 0.929578
Ran for 189550 frames Cell Events: 4770 mean_circ: 0.929504
Ran for 190050 frames Cell Events: 4780 mean_circ: 0.929569
Ran for 190550 frames Cell Events: 4793 mean_circ: 0.929617
Ran for 191050 frames Cell Events: 4814 mean_circ: 0.929615
Ran for 192550 frames Cell Events: 4854 mean_circ: 0.929525
Ran for 193050 frames Cell Events: 4863 mean_circ: 0.929573
Ran for 193550 frames Cell Events: 4876 mean_circ: 0.929598
Ran for 194050 frames Cell Events: 4887 mean_circ: 0.92962
Ran for 195050 frames Cell Events: 4918 mean_circ: 0.929601
Ran for 195550 frames Cell Events: 4935 mean_circ: 0.929527
Ran for 196050 frames Cell Events: 4942 mean_circ: 0.929521
Ran for 197050 frames Cell Events: 4973 mean_circ: 0.929389
Ran for 197550 frames Cell Events: 4983 mean_circ: 0.929381
Ran for 198050 frames Cell Events: 4996 mean_circ: 0.929373
Ran for 199550 frames Cell Events: 5034 mean_circ: 0.929298
Ran for 200050 frames Cell Events: 5044 mean_circ: 0.929317
Ran for 200550 frames Cell Events: 5065 mean_circ: 0.92936
Ran for 201050 frames Cell Events: 5082 mean_circ: 0.92931
Ran for 201550 frames Cell Events: 5090 mean_circ: 0.929314
Ran for 202050 frames Cell Events: 5107 mean_circ: 0.929363
Ran for 202550 frames Cell Events: 5133 mean_circ: 0.929366
Ran for 203050 frames Cell Events: 5144 mean_circ: 0.929358
Ran for 203550 frames Cell Events: 5150 mean_circ: 0.929381
Ran for 204050 frames Cell Events: 5161 mean_circ: 0.929355
Ran for 204550 frames Cell Events: 5175 mean_circ: 0.929331
Ran for 205050 frames Cell Events: 5184 mean_circ: 0.929267
Ran for 205550 frames Cell Events: 5191 mean_circ: 0.929279
Ran for 206550 frames Cell Events: 5228 mean_circ: 0.929171
Ran for 207050 frames Cell Events: 5243 mean_circ: 0.929239
Ran for 208050 frames Cell Events: 5270 mean_circ: 0.929258
Ran for 208550 frames Cell Events: 5283 mean_circ: 0.929249
Ran for 209050 frames Cell Events: 5298 mean_circ: 0.929256
Ran for 210050 frames Cell Events: 5324 mean_circ: 0.92923
Ran for 211050 frames Cell Events: 5354 mean_circ: 0.929227
Ran for 211550 frames Cell Events: 5371 mean_circ: 0.929172
Ran for 212050 frames Cell Events: 5386 mean_circ: 0.929072
Ran for 212550 frames Cell Events: 5397 mean_circ: 0.929073
Ran for 214050 frames Cell Events: 5433 mean_circ: 0.929162
Ran for 215050 frames Cell Events: 5476 mean_circ: 0.929081
Ran for 215550 frames Cell Events: 5484 mean_circ: 0.929089
Ran for 216050 frames Cell Events: 5489 mean_circ: 0.929114
Ran for 217050 frames Cell Events: 5515 mean_circ: 0.929119
Ran for 218050 frames Cell Events: 5534 mean_circ: 0.929096
Ran for 218550 frames Cell Events: 5544 mean_circ: 0.929102
Ran for 219050 frames Cell Events: 5552 mean_circ: 0.929105
Ran for 219550 frames Cell Events: 5566 mean_circ: 0.929117
Ran for 220050 frames Cell Events: 5577 mean_circ: 0.929073
Ran for 220550 frames Cell Events: 5586 mean_circ: 0.929071
Ran for 221050 frames Cell Events: 5595 mean_circ: 0.928991
Ran for 221550 frames Cell Events: 5605 mean_circ: 0.928937
Ran for 222050 frames Cell Events: 5616 mean_circ: 0.928962
Ran for 222550 frames Cell Events: 5628 mean_circ: 0.928982
Ran for 223050 frames Cell Events: 5640 mean_circ: 0.928969
Ran for 223550 frames Cell Events: 5654 mean_circ: 0.929003
Ran for 224550 frames Cell Events: 5684 mean_circ: 0.92895
Ran for 225050 frames Cell Events: 5694 mean_circ: 0.928935
Ran for 226050 frames Cell Events: 5731 mean_circ: 0.928909
Ran for 227050 frames Cell Events: 5769 mean_circ: 0.928898
Ran for 228550 frames Cell Events: 5823 mean_circ: 0.928907
Ran for 230050 frames Cell Events: 5879 mean_circ: 0.928948
Ran for 230550 frames Cell Events: 5901 mean_circ: 0.92895
Ran for 231050 frames Cell Events: 5921 mean_circ: 0.928927
Ran for 231550 frames Cell Events: 5935 mean_circ: 0.928929
Ran for 232050 frames Cell Events: 5953 mean_circ: 0.928902
Ran for 232550 frames Cell Events: 5962 mean_circ: 0.928925
Ran for 234050 frames Cell Events: 5996 mean_circ: 0.928816
Ran for 234550 frames Cell Events: 6013 mean_circ: 0.928799
Ran for 235050 frames Cell Events: 6026 mean_circ: 0.928796
Ran for 235550 frames Cell Events: 6038 mean_circ: 0.928756
Ran for 236050 frames Cell Events: 6056 mean_circ: 0.928729
Ran for 236550 frames Cell Events: 6070 mean_circ: 0.92876
Ran for 237050 frames Cell Events: 6082 mean_circ: 0.928786
Ran for 238550 frames Cell Events: 6121 mean_circ: 0.92873
Ran for 239050 frames Cell Events: 6130 mean_circ: 0.928703
Ran for 240050 frames Cell Events: 6162 mean_circ: 0.928657
Ran for 240550 frames Cell Events: 6178 mean_circ: 0.928624
Ran for 241550 frames Cell Events: 6210 mean_circ: 0.92863
Ran for 242550 frames Cell Events: 6235 mean_circ: 0.928622
Ran for 243050 frames Cell Events: 6248 mean_circ: 0.928639
Ran for 244550 frames Cell Events: 6295 mean_circ: 0.9287
Ran for 245050 frames Cell Events: 6304 mean_circ: 0.928704
Ran for 245550 frames Cell Events: 6323 mean_circ: 0.928678
Ran for 246050 frames Cell Events: 6332 mean_circ: 0.928733
Ran for 246550 frames Cell Events: 6346 mean_circ: 0.928743
Ran for 247050 frames Cell Events: 6352 mean_circ: 0.928693
Ran for 247550 frames Cell Events: 6370 mean_circ: 0.928704
Ran for 248050 frames Cell Events: 6383 mean_circ: 0.928683
Ran for 248550 frames Cell Events: 6397 mean_circ: 0.928659
Ran for 249050 frames Cell Events: 6404 mean_circ: 0.928687
Ran for 250550 frames Cell Events: 6442 mean_circ: 0.928625
Ran for 251550 frames Cell Events: 6468 mean_circ: 0.928603
Ran for 252050 frames Cell Events: 6486 mean_circ: 0.928602
Ran for 252550 frames Cell Events: 6507 mean_circ: 0.928586
Ran for 254050 frames Cell Events: 6561 mean_circ: 0.928522
Ran for 254550 frames Cell Events: 6584 mean_circ: 0.928519
Ran for 255550 frames Cell Events: 6609 mean_circ: 0.928437
Ran for 256050 frames Cell Events: 6625 mean_circ: 0.928454
Ran for 256550 frames Cell Events: 6649 mean_circ: 0.92841
Ran for 257550 frames Cell Events: 6672 mean_circ: 0.928387
Ran for 258550 frames Cell Events: 6710 mean_circ: 0.928442
Ran for 259050 frames Cell Events: 6726 mean_circ: 0.928442
Ran for 259550 frames Cell Events: 6738 mean_circ: 0.928432
Ran for 260050 frames Cell Events: 6746 mean_circ: 0.928423
Ran for 260550 frames Cell Events: 6752 mean_circ: 0.928413
Ran for 261550 frames Cell Events: 6778 mean_circ: 0.928277
Ran for 262050 frames Cell Events: 6790 mean_circ: 0.928235
Ran for 262550 frames Cell Events: 6807 mean_circ: 0.928275
Ran for 263050 frames Cell Events: 6824 mean_circ: 0.928241
Ran for 263550 frames Cell Events: 6843 mean_circ: 0.928191
Ran for 265050 frames Cell Events: 6890 mean_circ: 0.928186
Ran for 267050 frames Cell Events: 6968 mean_circ: 0.928167
Ran for 267550 frames Cell Events: 6978 mean_circ: 0.928164
Ran for 268050 frames Cell Events: 6993 mean_circ: 0.92819
Ran for 268550 frames Cell Events: 7008 mean_circ: 0.928192
Ran for 269050 frames Cell Events: 7018 mean_circ: 0.928208
Ran for 269550 frames Cell Events: 7035 mean_circ: 0.928216
Ran for 270050 frames Cell Events: 7049 mean_circ: 0.928247
Ran for 270550 frames Cell Events: 7063 mean_circ: 0.928259
Ran for 271050 frames Cell Events: 7070 mean_circ: 0.928279
Ran for 272550 frames Cell Events: 7135 mean_circ: 0.92822
Ran for 273050 frames Cell Events: 7143 mean_circ: 0.928218
Ran for 273550 frames Cell Events: 7162 mean_circ: 0.928181
Ran for 274050 frames Cell Events: 7182 mean_circ: 0.928222
Ran for 275050 frames Cell Events: 7219 mean_circ: 0.928163
Ran for 275550 frames Cell Events: 7233 mean_circ: 0.92819
Ran for 276550 frames Cell Events: 7260 mean_circ: 0.92823
Ran for 278050 frames Cell Events: 7304 mean_circ: 0.928237
Ran for 278550 frames Cell Events: 7325 mean_circ: 0.928281
Ran for 279050 frames Cell Events: 7340 mean_circ: 0.928311
Ran for 280550 frames Cell Events: 7378 mean_circ: 0.928296
Ran for 281050 frames Cell Events: 7386 mean_circ: 0.928261
Ran for 281550 frames Cell Events: 7395 mean_circ: 0.928271
Ran for 282550 frames Cell Events: 7415 mean_circ: 0.928303
Ran for 283550 frames Cell Events: 7440 mean_circ: 0.928269
Ran for 284050 frames Cell Events: 7457 mean_circ: 0.928275
Ran for 284550 frames Cell Events: 7466 mean_circ: 0.928285
Ran for 286050 frames Cell Events: 7510 mean_circ: 0.928271
Ran for 286550 frames Cell Events: 7522 mean_circ: 0.928248
Ran for 287550 frames Cell Events: 7557 mean_circ: 0.928227
Ran for 288050 frames Cell Events: 7562 mean_circ: 0.928209
Ran for 288550 frames Cell Events: 7579 mean_circ: 0.928183
Ran for 290050 frames Cell Events: 7643 mean_circ: 0.928226
Ran for 290550 frames Cell Events: 7653 mean_circ: 0.928189
Ran for 291050 frames Cell Events: 7663 mean_circ: 0.928152
Ran for 291550 frames Cell Events: 7677 mean_circ: 0.928119
Ran for 292050 frames Cell Events: 7689 mean_circ: 0.928103
Ran for 292550 frames Cell Events: 7709 mean_circ: 0.928092
Ran for 293550 frames Cell Events: 7738 mean_circ: 0.928066
Ran for 294050 frames Cell Events: 7754 mean_circ: 0.928021
Ran for 294550 frames Cell Events: 7769 mean_circ: 0.927994
Ran for 295050 frames Cell Events: 7791 mean_circ: 0.927997
Ran for 296050 frames Cell Events: 7825 mean_circ: 0.928022
Ran for 296550 frames Cell Events: 7843 mean_circ: 0.928037
Ran for 297050 frames Cell Events: 7856 mean_circ: 0.928052
Ran for 298050 frames Cell Events: 7887 mean_circ: 0.928044
Ran for 298550 frames Cell Events: 7907 mean_circ: 0.92794
Ran for 299050 frames Cell Events: 7923 mean_circ: 0.927944
Ran for 299550 frames Cell Events: 7937 mean_circ: 0.927925
Ran for 300050 frames Cell Events: 7951 mean_circ: 0.927945
Ran for 300550 frames Cell Events: 7958 mean_circ: 0.92796
Ran for 301050 frames Cell Events: 7972 mean_circ: 0.928003
Ran for 301550 frames Cell Events: 7992 mean_circ: 0.927974
Ran for 302050 frames Cell Events: 8005 mean_circ: 0.928005
Ran for 303050 frames Cell Events: 8033 mean_circ: 0.928003
Ran for 305050 frames Cell Events: 8090 mean_circ: 0.927956
Ran for 305550 frames Cell Events: 8103 mean_circ: 0.927991
Ran for 306050 frames Cell Events: 8116 mean_circ: 0.927937
Ran for 306550 frames Cell Events: 8129 mean_circ: 0.927961
Ran for 307050 frames Cell Events: 8144 mean_circ: 0.927975
Ran for 307550 frames Cell Events: 8153 mean_circ: 0.927972
Ran for 308050 frames Cell Events: 8163 mean_circ: 0.927955
Ran for 308550 frames Cell Events: 8174 mean_circ: 0.927972
Ran for 309050 frames Cell Events: 8195 mean_circ: 0.927948
Ran for 310050 frames Cell Events: 8212 mean_circ: 0.927942
Ran for 311050 frames Cell Events: 8245 mean_circ: 0.927936
Ran for 311550 frames Cell Events: 8252 mean_circ: 0.927952
Ran for 312050 frames Cell Events: 8267 mean_circ: 0.927985
Ran for 313050 frames Cell Events: 8295 mean_circ: 0.927977
Ran for 313550 frames Cell Events: 8312 mean_circ: 0.92797
Ran for 314050 frames Cell Events: 8322 mean_circ: 0.927959
Ran for 314550 frames Cell Events: 8337 mean_circ: 0.927946
Ran for 315050 frames Cell Events: 8352 mean_circ: 0.92795



End this measurment..



Stopping time: 2.18518e+009
****************************************
Measurement finished

Mean Circularitiy: 0.927949
Mean Area: 703.192
Mean FL-1 intensity: 3580.42
Mean FL-2 intensity: 4117.75
Mean FL-3 intensity: 0

frames processed: 314620
Total Time: 157633ms
Number of Runs (new bg img) 0
Frames collected: 315130
Skipped frames: 39998
Rescued Frames: 3690531
Samples DAQ: 78782488
Samples written: 157564814
Samples per Channel: 78782407
FPS: 1999.14

Samples per second: 499785
Expected samples/s: 500000

Events: 8352
Events per second: 52.984
jumped back (PMT): 7502
#Frames read, frequency
# 0 frames :427534
# 1 frames :180379
# 2 frames :7074
# 3 frames :2720
# 4 frames :1292
# 5 frames :687
# 6 frames :1590
# 7 frames :2391
# 8 frames :1139
# 9 frames :680
# 10 frames :1322
# 11 frames :1098
# 12 frames :597
# 13 frames :398
# 14 frames :238
# 15 frames :200
# 16 frames :170
# 17 frames :142
# 18 frames :150
# 19 frames :83
# 20 frames :77
# 21 frames :61
# 22 frames :57
# 23 frames :27
# 24 frames :37
# 25 frames :18
# 26 frames :15
# 27 frames :8
# 28 frames :9
# 29 frames :7
# 30 frames :11
# 31 frames :6
# 32 frames :4
# 33 frames :5
# 34 frames :2
# 36 frames :1
# 38 frames :1
# 39 frames :1
# 41 frames :3
# 44 frames :1
# 46 frames :1
# 47 frames :1
# 48 frames :1
# 49 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.6192
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0