Click on the log titles below to expand the log entries present in this DC resource.

dclab-export_2024-07-10_16.57.18 {"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc {
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "934897b8deb5e63aee60ad9d93baf4a0",
"name": "M1_20170612_2000_dsRNA_Z2_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "14:57:45"
}
}
dclab-tdms2rtdc-warnings LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10000 (max 10001) in
'10000'.
FG_Config.mcf [Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;

[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;

[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini [Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6

[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini [EVENT LOG] fRT-DC V1.06170206

Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.9421
Start pulse train for BG Aquisition..

Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.46106e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 17 mean_circ: 0.89589
Ran for 1050 frames Cell Events: 28 mean_circ: 0.896955
Ran for 2050 frames Cell Events: 44 mean_circ: 0.899017
Ran for 2550 frames Cell Events: 63 mean_circ: 0.906813
Ran for 3050 frames Cell Events: 82 mean_circ: 0.906378
Ran for 3550 frames Cell Events: 96 mean_circ: 0.904993
Ran for 4050 frames Cell Events: 119 mean_circ: 0.90876
Ran for 4550 frames Cell Events: 127 mean_circ: 0.908318
Ran for 5550 frames Cell Events: 153 mean_circ: 0.906335
Ran for 7050 frames Cell Events: 183 mean_circ: 0.906665
Ran for 8050 frames Cell Events: 192 mean_circ: 0.906951
Ran for 9050 frames Cell Events: 242 mean_circ: 0.906545
Ran for 10050 frames Cell Events: 278 mean_circ: 0.905355
Ran for 12050 frames Cell Events: 336 mean_circ: 0.907048
Ran for 14050 frames Cell Events: 409 mean_circ: 0.907478
Ran for 15050 frames Cell Events: 456 mean_circ: 0.907089
Ran for 15550 frames Cell Events: 479 mean_circ: 0.906073
Ran for 16050 frames Cell Events: 494 mean_circ: 0.906783
Ran for 16550 frames Cell Events: 512 mean_circ: 0.907513
Ran for 17050 frames Cell Events: 536 mean_circ: 0.908041
Ran for 19050 frames Cell Events: 602 mean_circ: 0.908634
Ran for 19550 frames Cell Events: 619 mean_circ: 0.909029
Ran for 20050 frames Cell Events: 635 mean_circ: 0.908771
Ran for 21550 frames Cell Events: 686 mean_circ: 0.909214
Ran for 22050 frames Cell Events: 704 mean_circ: 0.909673
Ran for 23550 frames Cell Events: 781 mean_circ: 0.911122
Ran for 24050 frames Cell Events: 795 mean_circ: 0.911698
Ran for 24550 frames Cell Events: 812 mean_circ: 0.911589
Ran for 25050 frames Cell Events: 831 mean_circ: 0.911786
Ran for 27050 frames Cell Events: 912 mean_circ: 0.912136
Ran for 28050 frames Cell Events: 954 mean_circ: 0.912444
Ran for 28550 frames Cell Events: 966 mean_circ: 0.911962
Ran for 29550 frames Cell Events: 997 mean_circ: 0.912119
Ran for 30550 frames Cell Events: 1032 mean_circ: 0.911719
Ran for 31050 frames Cell Events: 1049 mean_circ: 0.911862
Ran for 31550 frames Cell Events: 1074 mean_circ: 0.911863
Ran for 32550 frames Cell Events: 1126 mean_circ: 0.912491
Ran for 33050 frames Cell Events: 1139 mean_circ: 0.912198
Ran for 33550 frames Cell Events: 1150 mean_circ: 0.912093
Ran for 36050 frames Cell Events: 1244 mean_circ: 0.912961
Ran for 36550 frames Cell Events: 1260 mean_circ: 0.912951
Ran for 37050 frames Cell Events: 1272 mean_circ: 0.913017
Ran for 37550 frames Cell Events: 1281 mean_circ: 0.913238
Ran for 38050 frames Cell Events: 1296 mean_circ: 0.913236
Ran for 39550 frames Cell Events: 1355 mean_circ: 0.913415
Ran for 40050 frames Cell Events: 1389 mean_circ: 0.913499
Ran for 40550 frames Cell Events: 1413 mean_circ: 0.913612
Ran for 41050 frames Cell Events: 1443 mean_circ: 0.913959
Ran for 41550 frames Cell Events: 1471 mean_circ: 0.913663
Ran for 43550 frames Cell Events: 1562 mean_circ: 0.912855
Ran for 44050 frames Cell Events: 1579 mean_circ: 0.912705
Ran for 45050 frames Cell Events: 1613 mean_circ: 0.912833
Ran for 45550 frames Cell Events: 1627 mean_circ: 0.912714
Ran for 46050 frames Cell Events: 1640 mean_circ: 0.912675
Ran for 48050 frames Cell Events: 1718 mean_circ: 0.91285
Ran for 49050 frames Cell Events: 1745 mean_circ: 0.912962
Ran for 49550 frames Cell Events: 1759 mean_circ: 0.91301
Ran for 50550 frames Cell Events: 1780 mean_circ: 0.912937
Ran for 51050 frames Cell Events: 1791 mean_circ: 0.913025
Ran for 51550 frames Cell Events: 1807 mean_circ: 0.912844
Ran for 52050 frames Cell Events: 1819 mean_circ: 0.91279
Ran for 52550 frames Cell Events: 1833 mean_circ: 0.912982
Ran for 53050 frames Cell Events: 1845 mean_circ: 0.912863
Ran for 53550 frames Cell Events: 1854 mean_circ: 0.912822
Ran for 54050 frames Cell Events: 1874 mean_circ: 0.912979
Ran for 55050 frames Cell Events: 1900 mean_circ: 0.912646
Ran for 55550 frames Cell Events: 1920 mean_circ: 0.912638
Ran for 56550 frames Cell Events: 1954 mean_circ: 0.912641
Ran for 57550 frames Cell Events: 1990 mean_circ: 0.912706
Ran for 58050 frames Cell Events: 2005 mean_circ: 0.912606
Ran for 58550 frames Cell Events: 2029 mean_circ: 0.912574
Ran for 59050 frames Cell Events: 2042 mean_circ: 0.912712
Ran for 60550 frames Cell Events: 2088 mean_circ: 0.912791
Ran for 61050 frames Cell Events: 2097 mean_circ: 0.912939
Ran for 62550 frames Cell Events: 2144 mean_circ: 0.912783
Ran for 63050 frames Cell Events: 2159 mean_circ: 0.912687
Ran for 63550 frames Cell Events: 2168 mean_circ: 0.912846
Ran for 64550 frames Cell Events: 2197 mean_circ: 0.91279
Ran for 65050 frames Cell Events: 2214 mean_circ: 0.912734
Ran for 65550 frames Cell Events: 2229 mean_circ: 0.912837
Ran for 66550 frames Cell Events: 2263 mean_circ: 0.912783
Ran for 67050 frames Cell Events: 2298 mean_circ: 0.912782
Ran for 68050 frames Cell Events: 2354 mean_circ: 0.912854
Ran for 68550 frames Cell Events: 2370 mean_circ: 0.912946
Ran for 69050 frames Cell Events: 2379 mean_circ: 0.912772
Ran for 69550 frames Cell Events: 2393 mean_circ: 0.912782
Ran for 70050 frames Cell Events: 2403 mean_circ: 0.912741
Ran for 70550 frames Cell Events: 2414 mean_circ: 0.912794
Ran for 71050 frames Cell Events: 2423 mean_circ: 0.912744
Ran for 73050 frames Cell Events: 2508 mean_circ: 0.912839
Ran for 73550 frames Cell Events: 2521 mean_circ: 0.91281
Ran for 74550 frames Cell Events: 2559 mean_circ: 0.912719
Ran for 75050 frames Cell Events: 2572 mean_circ: 0.912693
Ran for 75550 frames Cell Events: 2582 mean_circ: 0.912738
Ran for 76050 frames Cell Events: 2595 mean_circ: 0.912762
Ran for 77050 frames Cell Events: 2621 mean_circ: 0.912745
Ran for 77550 frames Cell Events: 2635 mean_circ: 0.912672
Ran for 78050 frames Cell Events: 2650 mean_circ: 0.912637
Ran for 78550 frames Cell Events: 2663 mean_circ: 0.91245
Ran for 79050 frames Cell Events: 2673 mean_circ: 0.912507
Ran for 79550 frames Cell Events: 2693 mean_circ: 0.912583
Ran for 80050 frames Cell Events: 2708 mean_circ: 0.912725
Ran for 80550 frames Cell Events: 2726 mean_circ: 0.91268
Ran for 81050 frames Cell Events: 2743 mean_circ: 0.912702
Ran for 82050 frames Cell Events: 2788 mean_circ: 0.912915
Ran for 84050 frames Cell Events: 2875 mean_circ: 0.91292
Ran for 84550 frames Cell Events: 2885 mean_circ: 0.912817
Ran for 85050 frames Cell Events: 2897 mean_circ: 0.912839
Ran for 85550 frames Cell Events: 2910 mean_circ: 0.912745
Ran for 86050 frames Cell Events: 2929 mean_circ: 0.912766
Ran for 86550 frames Cell Events: 2960 mean_circ: 0.912766
Ran for 87050 frames Cell Events: 2975 mean_circ: 0.912736
Ran for 87550 frames Cell Events: 2994 mean_circ: 0.912651
Ran for 88050 frames Cell Events: 3003 mean_circ: 0.912568
Ran for 88550 frames Cell Events: 3019 mean_circ: 0.912584
Ran for 89550 frames Cell Events: 3048 mean_circ: 0.912522
Ran for 90050 frames Cell Events: 3056 mean_circ: 0.912532
Ran for 90550 frames Cell Events: 3071 mean_circ: 0.912528
Ran for 91050 frames Cell Events: 3085 mean_circ: 0.912528
Ran for 91550 frames Cell Events: 3106 mean_circ: 0.912574
Ran for 92050 frames Cell Events: 3123 mean_circ: 0.912447
Ran for 92550 frames Cell Events: 3136 mean_circ: 0.912478
Ran for 93550 frames Cell Events: 3175 mean_circ: 0.912551
Ran for 94050 frames Cell Events: 3182 mean_circ: 0.912509
Ran for 95050 frames Cell Events: 3227 mean_circ: 0.912491
Ran for 95550 frames Cell Events: 3243 mean_circ: 0.912537
Ran for 96550 frames Cell Events: 3273 mean_circ: 0.912533
Ran for 97050 frames Cell Events: 3290 mean_circ: 0.912608
Ran for 97550 frames Cell Events: 3308 mean_circ: 0.912582
Ran for 98050 frames Cell Events: 3333 mean_circ: 0.912595
Ran for 98550 frames Cell Events: 3345 mean_circ: 0.912577
Ran for 99550 frames Cell Events: 3373 mean_circ: 0.91267
Ran for 100050 frames Cell Events: 3387 mean_circ: 0.912647
Ran for 100550 frames Cell Events: 3409 mean_circ: 0.91244
Ran for 101050 frames Cell Events: 3425 mean_circ: 0.912376
Ran for 102550 frames Cell Events: 3486 mean_circ: 0.912426
Ran for 103050 frames Cell Events: 3508 mean_circ: 0.912534
Ran for 103550 frames Cell Events: 3531 mean_circ: 0.912523
Ran for 104050 frames Cell Events: 3551 mean_circ: 0.912553
Ran for 104550 frames Cell Events: 3564 mean_circ: 0.912562
Ran for 105550 frames Cell Events: 3593 mean_circ: 0.912368
Ran for 106050 frames Cell Events: 3610 mean_circ: 0.912412
Ran for 106550 frames Cell Events: 3623 mean_circ: 0.912312
Ran for 107050 frames Cell Events: 3636 mean_circ: 0.912343
Ran for 108550 frames Cell Events: 3698 mean_circ: 0.912421
Ran for 109050 frames Cell Events: 3720 mean_circ: 0.912443
Ran for 109550 frames Cell Events: 3744 mean_circ: 0.912415
Ran for 112050 frames Cell Events: 3823 mean_circ: 0.912481
Ran for 113050 frames Cell Events: 3845 mean_circ: 0.912471
Ran for 113550 frames Cell Events: 3864 mean_circ: 0.912432
Ran for 114550 frames Cell Events: 3888 mean_circ: 0.912419
Ran for 115050 frames Cell Events: 3913 mean_circ: 0.912433
Ran for 117550 frames Cell Events: 3985 mean_circ: 0.912168
Ran for 118050 frames Cell Events: 4008 mean_circ: 0.912151
Ran for 118550 frames Cell Events: 4026 mean_circ: 0.912203
Ran for 119050 frames Cell Events: 4048 mean_circ: 0.912259
Ran for 119550 frames Cell Events: 4064 mean_circ: 0.91223
Ran for 120050 frames Cell Events: 4074 mean_circ: 0.912122
Ran for 120550 frames Cell Events: 4099 mean_circ: 0.912132
Ran for 121050 frames Cell Events: 4108 mean_circ: 0.912139
Ran for 121550 frames Cell Events: 4127 mean_circ: 0.912037
Ran for 122050 frames Cell Events: 4136 mean_circ: 0.912075
Ran for 122550 frames Cell Events: 4147 mean_circ: 0.911938
Ran for 123050 frames Cell Events: 4161 mean_circ: 0.912052
Ran for 123550 frames Cell Events: 4173 mean_circ: 0.912067
Ran for 124550 frames Cell Events: 4203 mean_circ: 0.911974
Ran for 125050 frames Cell Events: 4218 mean_circ: 0.911852
Ran for 125550 frames Cell Events: 4237 mean_circ: 0.911901
Ran for 126550 frames Cell Events: 4272 mean_circ: 0.912013
Ran for 127050 frames Cell Events: 4282 mean_circ: 0.91202
Ran for 127550 frames Cell Events: 4295 mean_circ: 0.911976
Ran for 128550 frames Cell Events: 4333 mean_circ: 0.911951
Ran for 130050 frames Cell Events: 4384 mean_circ: 0.911968
Ran for 131050 frames Cell Events: 4427 mean_circ: 0.911968
Ran for 131550 frames Cell Events: 4446 mean_circ: 0.91206
Ran for 132050 frames Cell Events: 4471 mean_circ: 0.912105
Ran for 133050 frames Cell Events: 4510 mean_circ: 0.912042
Ran for 133550 frames Cell Events: 4532 mean_circ: 0.912041
Ran for 134550 frames Cell Events: 4564 mean_circ: 0.911996
Ran for 135550 frames Cell Events: 4587 mean_circ: 0.912031
Ran for 136550 frames Cell Events: 4627 mean_circ: 0.911811
Ran for 139550 frames Cell Events: 4735 mean_circ: 0.911769
Ran for 140050 frames Cell Events: 4757 mean_circ: 0.911879
Ran for 141050 frames Cell Events: 4812 mean_circ: 0.911979
Ran for 141550 frames Cell Events: 4832 mean_circ: 0.911946
Ran for 142050 frames Cell Events: 4860 mean_circ: 0.912056
Ran for 142550 frames Cell Events: 4870 mean_circ: 0.912087
Ran for 143050 frames Cell Events: 4888 mean_circ: 0.912117
Ran for 143550 frames Cell Events: 4906 mean_circ: 0.912109
Ran for 144550 frames Cell Events: 4938 mean_circ: 0.911938
Ran for 145050 frames Cell Events: 4957 mean_circ: 0.911959
Ran for 145550 frames Cell Events: 4972 mean_circ: 0.911928
Ran for 146050 frames Cell Events: 4988 mean_circ: 0.91182
Ran for 146550 frames Cell Events: 5015 mean_circ: 0.911846
Ran for 147050 frames Cell Events: 5032 mean_circ: 0.911809
Ran for 148550 frames Cell Events: 5073 mean_circ: 0.911735
Ran for 149550 frames Cell Events: 5099 mean_circ: 0.911728
Ran for 150550 frames Cell Events: 5127 mean_circ: 0.911766
Ran for 151050 frames Cell Events: 5138 mean_circ: 0.911704
Ran for 151550 frames Cell Events: 5157 mean_circ: 0.911675
Ran for 152050 frames Cell Events: 5176 mean_circ: 0.911703
Ran for 154550 frames Cell Events: 5233 mean_circ: 0.91151
Ran for 155050 frames Cell Events: 5250 mean_circ: 0.911464
Ran for 156050 frames Cell Events: 5277 mean_circ: 0.911505
Ran for 156550 frames Cell Events: 5296 mean_circ: 0.911536
Ran for 157050 frames Cell Events: 5306 mean_circ: 0.91155
Ran for 157550 frames Cell Events: 5324 mean_circ: 0.911433
Ran for 158050 frames Cell Events: 5343 mean_circ: 0.911439
Ran for 158550 frames Cell Events: 5357 mean_circ: 0.911384
Ran for 159050 frames Cell Events: 5367 mean_circ: 0.91129
Ran for 159550 frames Cell Events: 5378 mean_circ: 0.91126
Ran for 161050 frames Cell Events: 5436 mean_circ: 0.911255
Ran for 162550 frames Cell Events: 5473 mean_circ: 0.911278
Ran for 163050 frames Cell Events: 5482 mean_circ: 0.911213
Ran for 163550 frames Cell Events: 5498 mean_circ: 0.911128
Ran for 164050 frames Cell Events: 5519 mean_circ: 0.911172
Ran for 164550 frames Cell Events: 5539 mean_circ: 0.911247
Ran for 165050 frames Cell Events: 5571 mean_circ: 0.911223
Ran for 165550 frames Cell Events: 5585 mean_circ: 0.911301
Ran for 166050 frames Cell Events: 5597 mean_circ: 0.911262
Ran for 166550 frames Cell Events: 5608 mean_circ: 0.91126
Ran for 167550 frames Cell Events: 5629 mean_circ: 0.91121
Ran for 168050 frames Cell Events: 5637 mean_circ: 0.91119
Ran for 168550 frames Cell Events: 5653 mean_circ: 0.911189
Ran for 169050 frames Cell Events: 5674 mean_circ: 0.911205
Ran for 169550 frames Cell Events: 5693 mean_circ: 0.911205
Ran for 170550 frames Cell Events: 5728 mean_circ: 0.911173
Ran for 171050 frames Cell Events: 5744 mean_circ: 0.911134
Ran for 171550 frames Cell Events: 5756 mean_circ: 0.911121
Ran for 172550 frames Cell Events: 5785 mean_circ: 0.9111
Ran for 173550 frames Cell Events: 5813 mean_circ: 0.911121
Ran for 175050 frames Cell Events: 5857 mean_circ: 0.911142
Ran for 175550 frames Cell Events: 5874 mean_circ: 0.911084
Ran for 176050 frames Cell Events: 5883 mean_circ: 0.911001
Ran for 176550 frames Cell Events: 5896 mean_circ: 0.911026
Ran for 177050 frames Cell Events: 5912 mean_circ: 0.911021
Ran for 179050 frames Cell Events: 5963 mean_circ: 0.910982
Ran for 179550 frames Cell Events: 5984 mean_circ: 0.910993
Ran for 180050 frames Cell Events: 5997 mean_circ: 0.910993
Ran for 180550 frames Cell Events: 6017 mean_circ: 0.910943
Ran for 181050 frames Cell Events: 6029 mean_circ: 0.910927
Ran for 182050 frames Cell Events: 6052 mean_circ: 0.910902
Ran for 182550 frames Cell Events: 6063 mean_circ: 0.910957
Ran for 183050 frames Cell Events: 6077 mean_circ: 0.910991
Ran for 183550 frames Cell Events: 6101 mean_circ: 0.910938
Ran for 184050 frames Cell Events: 6113 mean_circ: 0.910906
Ran for 184550 frames Cell Events: 6137 mean_circ: 0.910903
Ran for 185050 frames Cell Events: 6147 mean_circ: 0.910922
Ran for 185550 frames Cell Events: 6160 mean_circ: 0.910963
Ran for 188550 frames Cell Events: 6257 mean_circ: 0.910868
Ran for 189050 frames Cell Events: 6274 mean_circ: 0.910827
Ran for 189550 frames Cell Events: 6305 mean_circ: 0.910813
Ran for 190550 frames Cell Events: 6350 mean_circ: 0.91075
Ran for 192050 frames Cell Events: 6411 mean_circ: 0.910789
Ran for 194050 frames Cell Events: 6486 mean_circ: 0.910719
Ran for 195050 frames Cell Events: 6521 mean_circ: 0.910745
Ran for 195550 frames Cell Events: 6531 mean_circ: 0.910798
Ran for 196050 frames Cell Events: 6545 mean_circ: 0.910835
Ran for 196550 frames Cell Events: 6562 mean_circ: 0.910849
Ran for 197050 frames Cell Events: 6583 mean_circ: 0.910914
Ran for 198050 frames Cell Events: 6633 mean_circ: 0.910926
Ran for 199050 frames Cell Events: 6683 mean_circ: 0.910937
Ran for 200050 frames Cell Events: 6725 mean_circ: 0.911087
Ran for 203550 frames Cell Events: 6872 mean_circ: 0.910959
Ran for 204050 frames Cell Events: 6883 mean_circ: 0.910978
Ran for 205050 frames Cell Events: 6927 mean_circ: 0.911022
Ran for 206550 frames Cell Events: 6969 mean_circ: 0.911061
Ran for 207050 frames Cell Events: 6991 mean_circ: 0.911144
Ran for 207550 frames Cell Events: 7009 mean_circ: 0.911193
Ran for 208050 frames Cell Events: 7024 mean_circ: 0.911128
Ran for 208550 frames Cell Events: 7040 mean_circ: 0.911082
Ran for 209050 frames Cell Events: 7051 mean_circ: 0.9111
Ran for 209550 frames Cell Events: 7073 mean_circ: 0.911073
Ran for 210550 frames Cell Events: 7103 mean_circ: 0.911011
Ran for 211550 frames Cell Events: 7134 mean_circ: 0.910977
Ran for 213050 frames Cell Events: 7217 mean_circ: 0.911062
Ran for 213550 frames Cell Events: 7239 mean_circ: 0.911109
Ran for 214050 frames Cell Events: 7253 mean_circ: 0.91111
Ran for 214550 frames Cell Events: 7262 mean_circ: 0.911139
Ran for 215050 frames Cell Events: 7269 mean_circ: 0.911133
Ran for 216050 frames Cell Events: 7308 mean_circ: 0.911143
Ran for 216550 frames Cell Events: 7323 mean_circ: 0.911141
Ran for 218050 frames Cell Events: 7388 mean_circ: 0.911138
Ran for 218550 frames Cell Events: 7410 mean_circ: 0.911135
Ran for 219050 frames Cell Events: 7429 mean_circ: 0.911129
Ran for 219550 frames Cell Events: 7442 mean_circ: 0.91108
Ran for 220050 frames Cell Events: 7450 mean_circ: 0.911077
Ran for 220550 frames Cell Events: 7465 mean_circ: 0.911062
Ran for 221050 frames Cell Events: 7484 mean_circ: 0.911093
Ran for 221550 frames Cell Events: 7496 mean_circ: 0.911166
Ran for 222050 frames Cell Events: 7514 mean_circ: 0.911115
Ran for 223550 frames Cell Events: 7572 mean_circ: 0.911129
Ran for 224050 frames Cell Events: 7593 mean_circ: 0.911174
Ran for 224550 frames Cell Events: 7607 mean_circ: 0.911186
Ran for 225050 frames Cell Events: 7618 mean_circ: 0.911242
Ran for 226050 frames Cell Events: 7646 mean_circ: 0.911294
Ran for 226550 frames Cell Events: 7667 mean_circ: 0.911285
Ran for 227050 frames Cell Events: 7680 mean_circ: 0.911278
Ran for 227550 frames Cell Events: 7691 mean_circ: 0.911274
Ran for 228050 frames Cell Events: 7700 mean_circ: 0.911297
Ran for 229050 frames Cell Events: 7742 mean_circ: 0.911196
Ran for 231550 frames Cell Events: 7841 mean_circ: 0.911251
Ran for 232050 frames Cell Events: 7859 mean_circ: 0.911309
Ran for 233050 frames Cell Events: 7889 mean_circ: 0.911267
Ran for 233550 frames Cell Events: 7901 mean_circ: 0.911267
Ran for 234050 frames Cell Events: 7911 mean_circ: 0.911237
Ran for 235050 frames Cell Events: 7948 mean_circ: 0.911269
Ran for 235550 frames Cell Events: 7957 mean_circ: 0.911251
Ran for 236550 frames Cell Events: 7997 mean_circ: 0.911306
Ran for 237050 frames Cell Events: 8014 mean_circ: 0.911276
Ran for 237550 frames Cell Events: 8033 mean_circ: 0.91124
Ran for 238050 frames Cell Events: 8047 mean_circ: 0.911234
Ran for 239050 frames Cell Events: 8084 mean_circ: 0.911155
Ran for 239550 frames Cell Events: 8100 mean_circ: 0.91109
Ran for 241050 frames Cell Events: 8145 mean_circ: 0.911198
Ran for 242050 frames Cell Events: 8186 mean_circ: 0.911227
Ran for 242550 frames Cell Events: 8197 mean_circ: 0.911223
Ran for 243050 frames Cell Events: 8217 mean_circ: 0.91118
Ran for 243550 frames Cell Events: 8233 mean_circ: 0.911249
Ran for 244050 frames Cell Events: 8244 mean_circ: 0.911258
Ran for 244550 frames Cell Events: 8262 mean_circ: 0.911304
Ran for 245050 frames Cell Events: 8293 mean_circ: 0.911336
Ran for 245550 frames Cell Events: 8316 mean_circ: 0.911364
Ran for 246050 frames Cell Events: 8340 mean_circ: 0.911376
Ran for 246550 frames Cell Events: 8360 mean_circ: 0.911394
Ran for 247050 frames Cell Events: 8376 mean_circ: 0.91142
Ran for 247550 frames Cell Events: 8398 mean_circ: 0.91143
Ran for 248550 frames Cell Events: 8434 mean_circ: 0.9114
Ran for 249050 frames Cell Events: 8452 mean_circ: 0.911304
Ran for 250050 frames Cell Events: 8483 mean_circ: 0.911276
Ran for 251050 frames Cell Events: 8518 mean_circ: 0.911329
Ran for 252050 frames Cell Events: 8555 mean_circ: 0.911339
Ran for 252550 frames Cell Events: 8589 mean_circ: 0.91133
Ran for 253050 frames Cell Events: 8625 mean_circ: 0.911363
Ran for 253550 frames Cell Events: 8654 mean_circ: 0.911376
Ran for 254050 frames Cell Events: 8670 mean_circ: 0.911392
Ran for 254550 frames Cell Events: 8691 mean_circ: 0.911428
Ran for 255050 frames Cell Events: 8718 mean_circ: 0.911466
Ran for 255550 frames Cell Events: 8733 mean_circ: 0.911438
Ran for 256050 frames Cell Events: 8760 mean_circ: 0.911349
Ran for 256550 frames Cell Events: 8767 mean_circ: 0.911329
Ran for 257050 frames Cell Events: 8777 mean_circ: 0.91132
Ran for 258050 frames Cell Events: 8804 mean_circ: 0.911375
Ran for 258550 frames Cell Events: 8820 mean_circ: 0.911389
Ran for 259050 frames Cell Events: 8838 mean_circ: 0.911438
Ran for 259550 frames Cell Events: 8856 mean_circ: 0.91144
Ran for 260050 frames Cell Events: 8872 mean_circ: 0.911432
Ran for 260550 frames Cell Events: 8892 mean_circ: 0.911444
Ran for 261550 frames Cell Events: 8925 mean_circ: 0.911443
Ran for 262050 frames Cell Events: 8951 mean_circ: 0.911501
Ran for 262550 frames Cell Events: 8976 mean_circ: 0.91153
Ran for 263550 frames Cell Events: 9014 mean_circ: 0.911456
Ran for 264050 frames Cell Events: 9024 mean_circ: 0.91147
Ran for 264550 frames Cell Events: 9034 mean_circ: 0.91147
Ran for 265050 frames Cell Events: 9045 mean_circ: 0.911471
Ran for 267550 frames Cell Events: 9119 mean_circ: 0.911469
Ran for 268550 frames Cell Events: 9142 mean_circ: 0.911468
Ran for 269050 frames Cell Events: 9152 mean_circ: 0.911484
Ran for 269550 frames Cell Events: 9164 mean_circ: 0.911468
Ran for 270550 frames Cell Events: 9200 mean_circ: 0.911447
Ran for 271050 frames Cell Events: 9216 mean_circ: 0.911464
Ran for 272050 frames Cell Events: 9252 mean_circ: 0.911435
Ran for 273050 frames Cell Events: 9277 mean_circ: 0.911446
Ran for 273550 frames Cell Events: 9292 mean_circ: 0.911414
Ran for 275050 frames Cell Events: 9340 mean_circ: 0.911445
Ran for 276050 frames Cell Events: 9362 mean_circ: 0.911402
Ran for 276550 frames Cell Events: 9377 mean_circ: 0.911422
Ran for 277550 frames Cell Events: 9405 mean_circ: 0.911439
Ran for 278050 frames Cell Events: 9415 mean_circ: 0.911422
Ran for 278550 frames Cell Events: 9422 mean_circ: 0.911417
Ran for 279050 frames Cell Events: 9439 mean_circ: 0.911415
Ran for 279550 frames Cell Events: 9455 mean_circ: 0.91138
Ran for 280050 frames Cell Events: 9475 mean_circ: 0.911396
Ran for 280550 frames Cell Events: 9489 mean_circ: 0.911357
Ran for 281050 frames Cell Events: 9508 mean_circ: 0.911345
Ran for 282050 frames Cell Events: 9532 mean_circ: 0.911328
Ran for 283550 frames Cell Events: 9588 mean_circ: 0.911283
Ran for 284050 frames Cell Events: 9596 mean_circ: 0.911239
Ran for 285550 frames Cell Events: 9652 mean_circ: 0.911209
Ran for 286050 frames Cell Events: 9672 mean_circ: 0.911184
Ran for 288050 frames Cell Events: 9753 mean_circ: 0.911227
Ran for 289050 frames Cell Events: 9781 mean_circ: 0.911187
Ran for 290050 frames Cell Events: 9812 mean_circ: 0.91115
Ran for 290550 frames Cell Events: 9832 mean_circ: 0.911116
Ran for 291050 frames Cell Events: 9849 mean_circ: 0.911087
Ran for 291550 frames Cell Events: 9865 mean_circ: 0.911025
Ran for 292050 frames Cell Events: 9888 mean_circ: 0.911092
Ran for 292550 frames Cell Events: 9907 mean_circ: 0.91113
Ran for 293050 frames Cell Events: 9918 mean_circ: 0.911176
Ran for 293550 frames Cell Events: 9938 mean_circ: 0.911174
Ran for 294550 frames Cell Events: 9970 mean_circ: 0.911222
Ran for 295050 frames Cell Events: 9988 mean_circ: 0.911211



End this measurment.
because stop condition (time/nr of cells) was met

Stopping time: 2.4612e+009
****************************************
Measurement finished

Mean Circularitiy: 0.91123
Mean Area: 669.337
Mean FL-1 intensity: 2720.95
Mean FL-2 intensity: 3092.81
Mean FL-3 intensity: 0

frames processed: 294479
Total Time: 147783ms
Number of Runs (new bg img) 0
Frames collected: 295397
Skipped frames: 32912
Rescued Frames: 3954431
Samples DAQ: 73850087
Samples written: 147699194
Samples per Channel: 73849597
FPS: 1998.86

Samples per second: 499718
Expected samples/s: 500000

Events: 10001
Events per second: 67.6737
jumped back (PMT): 7931
#Frames read, frequency
# 0 frames :425899
# 1 frames :139345
# 2 frames :8322
# 3 frames :2787
# 4 frames :1670
# 5 frames :942
# 6 frames :1550
# 7 frames :2615
# 8 frames :1301
# 9 frames :990
# 10 frames :1553
# 11 frames :978
# 12 frames :668
# 13 frames :413
# 14 frames :280
# 15 frames :258
# 16 frames :237
# 17 frames :187
# 18 frames :133
# 19 frames :124
# 20 frames :77
# 21 frames :74
# 22 frames :44
# 23 frames :42
# 24 frames :40
# 25 frames :31
# 26 frames :19
# 27 frames :18
# 28 frames :22
# 29 frames :14
# 30 frames :19
# 31 frames :18
# 32 frames :6
# 33 frames :9
# 34 frames :5
# 35 frames :8
# 36 frames :4
# 37 frames :5
# 38 frames :9
# 39 frames :1
# 40 frames :3
# 41 frames :5
# 42 frames :2
# 43 frames :3
# 44 frames :6
# 46 frames :1
# 47 frames :1
# 48 frames :2
# 49 frames :1
# 50 frames :1
# 52 frames :1
# 53 frames :1
# 54 frames :2
# 56 frames :1
# 60 frames :1
# 64 frames :1
M1_para.ini [General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100

[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0

#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.9421
parameters.txt #fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0