Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-09_18.35.53
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "0070d8e2a0c7d7b5eb1063fa2ad862d4",
"name": "M1_20170519_1552_dsRNA_L7_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "16:36:25"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10001 (max 10002) in
'10001'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 26.3
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 3.7262e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 23 mean_circ: 0.924397
Ran for 1550 frames Cell Events: 73 mean_circ: 0.938435
Ran for 2050 frames Cell Events: 87 mean_circ: 0.93525
Ran for 3050 frames Cell Events: 136 mean_circ: 0.93934
Ran for 4050 frames Cell Events: 179 mean_circ: 0.938129
Ran for 4550 frames Cell Events: 204 mean_circ: 0.940006
Ran for 5550 frames Cell Events: 248 mean_circ: 0.942737
Ran for 6050 frames Cell Events: 268 mean_circ: 0.944146
Ran for 6550 frames Cell Events: 279 mean_circ: 0.943724
Ran for 7050 frames Cell Events: 311 mean_circ: 0.943833
Ran for 7550 frames Cell Events: 333 mean_circ: 0.944715
Ran for 9050 frames Cell Events: 391 mean_circ: 0.944319
Ran for 9550 frames Cell Events: 408 mean_circ: 0.944135
Ran for 10050 frames Cell Events: 431 mean_circ: 0.943982
Ran for 11050 frames Cell Events: 470 mean_circ: 0.942921
Ran for 12050 frames Cell Events: 501 mean_circ: 0.943325
Ran for 12550 frames Cell Events: 517 mean_circ: 0.943555
Ran for 13550 frames Cell Events: 573 mean_circ: 0.943508
Ran for 14550 frames Cell Events: 605 mean_circ: 0.943578
Ran for 15050 frames Cell Events: 627 mean_circ: 0.943714
Ran for 15550 frames Cell Events: 654 mean_circ: 0.943257
Ran for 16550 frames Cell Events: 684 mean_circ: 0.943038
Ran for 17050 frames Cell Events: 701 mean_circ: 0.943406
Ran for 18050 frames Cell Events: 738 mean_circ: 0.94378
Ran for 19050 frames Cell Events: 790 mean_circ: 0.944176
Ran for 19550 frames Cell Events: 806 mean_circ: 0.94434
Ran for 20050 frames Cell Events: 821 mean_circ: 0.944329
Ran for 21050 frames Cell Events: 854 mean_circ: 0.944186
Ran for 21550 frames Cell Events: 883 mean_circ: 0.944214
Ran for 22050 frames Cell Events: 904 mean_circ: 0.944574
Ran for 22550 frames Cell Events: 927 mean_circ: 0.944596
Ran for 23050 frames Cell Events: 946 mean_circ: 0.944676
Ran for 23550 frames Cell Events: 963 mean_circ: 0.944695
Ran for 24550 frames Cell Events: 995 mean_circ: 0.944843
Ran for 25050 frames Cell Events: 1023 mean_circ: 0.944713
Ran for 25550 frames Cell Events: 1034 mean_circ: 0.944736
Ran for 26050 frames Cell Events: 1051 mean_circ: 0.944748
Ran for 26550 frames Cell Events: 1065 mean_circ: 0.944739
Ran for 27550 frames Cell Events: 1120 mean_circ: 0.944887
Ran for 28050 frames Cell Events: 1131 mean_circ: 0.944205
Ran for 28550 frames Cell Events: 1146 mean_circ: 0.944364
Ran for 29050 frames Cell Events: 1162 mean_circ: 0.944495
Ran for 30050 frames Cell Events: 1185 mean_circ: 0.944098
Ran for 30550 frames Cell Events: 1208 mean_circ: 0.943837
Ran for 31050 frames Cell Events: 1229 mean_circ: 0.943759
Ran for 31550 frames Cell Events: 1255 mean_circ: 0.943459
Ran for 32050 frames Cell Events: 1278 mean_circ: 0.943599
Ran for 32550 frames Cell Events: 1294 mean_circ: 0.943861
Ran for 35050 frames Cell Events: 1403 mean_circ: 0.943657
Ran for 36050 frames Cell Events: 1483 mean_circ: 0.943842
Ran for 36550 frames Cell Events: 1508 mean_circ: 0.943958
Ran for 37550 frames Cell Events: 1545 mean_circ: 0.944092
Ran for 38550 frames Cell Events: 1597 mean_circ: 0.943989
Ran for 40050 frames Cell Events: 1694 mean_circ: 0.943345
Ran for 41050 frames Cell Events: 1753 mean_circ: 0.9432
Ran for 41550 frames Cell Events: 1775 mean_circ: 0.943424
Ran for 42050 frames Cell Events: 1795 mean_circ: 0.94336
Ran for 42550 frames Cell Events: 1807 mean_circ: 0.943384
Ran for 43050 frames Cell Events: 1829 mean_circ: 0.943371
Ran for 43550 frames Cell Events: 1855 mean_circ: 0.94347
Ran for 44050 frames Cell Events: 1866 mean_circ: 0.943466
Ran for 44550 frames Cell Events: 1886 mean_circ: 0.943613
Ran for 45050 frames Cell Events: 1908 mean_circ: 0.943626
Ran for 45550 frames Cell Events: 1920 mean_circ: 0.943442
Ran for 46550 frames Cell Events: 1956 mean_circ: 0.943345
Ran for 48050 frames Cell Events: 2034 mean_circ: 0.943164
Ran for 48550 frames Cell Events: 2059 mean_circ: 0.943311
Ran for 49550 frames Cell Events: 2100 mean_circ: 0.943158
Ran for 50050 frames Cell Events: 2118 mean_circ: 0.943248
Ran for 50550 frames Cell Events: 2139 mean_circ: 0.943207
Ran for 52050 frames Cell Events: 2216 mean_circ: 0.943405
Ran for 52550 frames Cell Events: 2246 mean_circ: 0.943485
Ran for 53050 frames Cell Events: 2258 mean_circ: 0.943521
Ran for 54050 frames Cell Events: 2303 mean_circ: 0.943614
Ran for 55050 frames Cell Events: 2352 mean_circ: 0.943486
Ran for 55550 frames Cell Events: 2368 mean_circ: 0.943512
Ran for 56050 frames Cell Events: 2388 mean_circ: 0.943651
Ran for 56550 frames Cell Events: 2409 mean_circ: 0.943648
Ran for 57050 frames Cell Events: 2427 mean_circ: 0.94368
Ran for 58550 frames Cell Events: 2520 mean_circ: 0.944061
Ran for 59550 frames Cell Events: 2581 mean_circ: 0.943928
Ran for 60050 frames Cell Events: 2599 mean_circ: 0.943778
Ran for 60550 frames Cell Events: 2624 mean_circ: 0.943785
Ran for 61050 frames Cell Events: 2645 mean_circ: 0.943848
Ran for 62550 frames Cell Events: 2728 mean_circ: 0.943548
Ran for 64050 frames Cell Events: 2816 mean_circ: 0.943104
Ran for 65050 frames Cell Events: 2861 mean_circ: 0.943141
Ran for 66050 frames Cell Events: 2903 mean_circ: 0.943144
Ran for 66550 frames Cell Events: 2925 mean_circ: 0.943035
Ran for 68050 frames Cell Events: 2985 mean_circ: 0.943063
Ran for 70050 frames Cell Events: 3095 mean_circ: 0.942954
Ran for 70550 frames Cell Events: 3126 mean_circ: 0.943116
Ran for 71050 frames Cell Events: 3142 mean_circ: 0.943091
Ran for 71550 frames Cell Events: 3166 mean_circ: 0.943054
Ran for 72050 frames Cell Events: 3192 mean_circ: 0.94305
Ran for 72550 frames Cell Events: 3206 mean_circ: 0.943041
Ran for 73050 frames Cell Events: 3227 mean_circ: 0.943022
Ran for 73550 frames Cell Events: 3250 mean_circ: 0.943007
Ran for 75050 frames Cell Events: 3309 mean_circ: 0.942836
Ran for 75550 frames Cell Events: 3325 mean_circ: 0.942883
Ran for 76050 frames Cell Events: 3346 mean_circ: 0.942832
Ran for 77050 frames Cell Events: 3381 mean_circ: 0.942855
Ran for 78550 frames Cell Events: 3438 mean_circ: 0.942879
Ran for 79050 frames Cell Events: 3469 mean_circ: 0.942878
Ran for 79550 frames Cell Events: 3483 mean_circ: 0.942782
Ran for 80050 frames Cell Events: 3501 mean_circ: 0.942836
Ran for 81050 frames Cell Events: 3551 mean_circ: 0.942934
Ran for 81550 frames Cell Events: 3575 mean_circ: 0.94294
Ran for 82050 frames Cell Events: 3605 mean_circ: 0.942874
Ran for 82550 frames Cell Events: 3631 mean_circ: 0.94285
Ran for 83550 frames Cell Events: 3673 mean_circ: 0.942927
Ran for 84050 frames Cell Events: 3700 mean_circ: 0.943055
Ran for 85050 frames Cell Events: 3747 mean_circ: 0.94309
Ran for 85550 frames Cell Events: 3772 mean_circ: 0.942999
Ran for 86050 frames Cell Events: 3793 mean_circ: 0.943094
Ran for 86550 frames Cell Events: 3830 mean_circ: 0.943169
Ran for 87050 frames Cell Events: 3865 mean_circ: 0.943155
Ran for 88050 frames Cell Events: 3908 mean_circ: 0.943243
Ran for 89050 frames Cell Events: 3963 mean_circ: 0.943291
Ran for 89550 frames Cell Events: 3988 mean_circ: 0.943396
Ran for 90550 frames Cell Events: 4029 mean_circ: 0.943379
Ran for 92050 frames Cell Events: 4117 mean_circ: 0.943372
Ran for 92550 frames Cell Events: 4135 mean_circ: 0.94341
Ran for 94550 frames Cell Events: 4241 mean_circ: 0.943421
Ran for 95050 frames Cell Events: 4262 mean_circ: 0.943456
Ran for 95550 frames Cell Events: 4283 mean_circ: 0.94346
Ran for 96050 frames Cell Events: 4312 mean_circ: 0.94349
Ran for 96550 frames Cell Events: 4344 mean_circ: 0.943539
Ran for 97050 frames Cell Events: 4373 mean_circ: 0.943535
Ran for 97550 frames Cell Events: 4403 mean_circ: 0.94355
Ran for 98550 frames Cell Events: 4456 mean_circ: 0.943454
Ran for 100050 frames Cell Events: 4532 mean_circ: 0.943433
Ran for 100550 frames Cell Events: 4549 mean_circ: 0.943401
Ran for 101050 frames Cell Events: 4574 mean_circ: 0.94341
Ran for 101550 frames Cell Events: 4596 mean_circ: 0.943342
Ran for 102550 frames Cell Events: 4659 mean_circ: 0.943378
Ran for 103050 frames Cell Events: 4684 mean_circ: 0.943422
Ran for 103550 frames Cell Events: 4717 mean_circ: 0.94344
Ran for 104050 frames Cell Events: 4741 mean_circ: 0.943465
Ran for 104550 frames Cell Events: 4753 mean_circ: 0.943404
Ran for 106050 frames Cell Events: 4825 mean_circ: 0.943502
Ran for 107050 frames Cell Events: 4857 mean_circ: 0.943498
Ran for 107550 frames Cell Events: 4876 mean_circ: 0.943515
Ran for 108050 frames Cell Events: 4917 mean_circ: 0.9436
Ran for 108550 frames Cell Events: 4932 mean_circ: 0.94363
Ran for 109050 frames Cell Events: 4952 mean_circ: 0.94365
Ran for 110050 frames Cell Events: 4993 mean_circ: 0.943633
Ran for 112050 frames Cell Events: 5103 mean_circ: 0.943481
Ran for 113050 frames Cell Events: 5162 mean_circ: 0.943455
Ran for 113550 frames Cell Events: 5187 mean_circ: 0.94342
Ran for 114050 frames Cell Events: 5217 mean_circ: 0.943395
Ran for 116050 frames Cell Events: 5321 mean_circ: 0.943476
Ran for 116550 frames Cell Events: 5341 mean_circ: 0.943516
Ran for 118050 frames Cell Events: 5413 mean_circ: 0.9437
Ran for 118550 frames Cell Events: 5442 mean_circ: 0.943662
Ran for 119050 frames Cell Events: 5464 mean_circ: 0.943696
Ran for 119550 frames Cell Events: 5479 mean_circ: 0.943645
Ran for 120050 frames Cell Events: 5505 mean_circ: 0.943656
Ran for 120550 frames Cell Events: 5522 mean_circ: 0.943657
Ran for 121550 frames Cell Events: 5557 mean_circ: 0.943739
Ran for 122050 frames Cell Events: 5580 mean_circ: 0.943709
Ran for 122550 frames Cell Events: 5596 mean_circ: 0.943719
Ran for 123050 frames Cell Events: 5619 mean_circ: 0.943689
Ran for 124050 frames Cell Events: 5672 mean_circ: 0.943593
Ran for 124550 frames Cell Events: 5695 mean_circ: 0.943581
Ran for 125050 frames Cell Events: 5716 mean_circ: 0.943611
Ran for 126050 frames Cell Events: 5763 mean_circ: 0.943614
Ran for 127550 frames Cell Events: 5852 mean_circ: 0.943674
Ran for 128050 frames Cell Events: 5876 mean_circ: 0.943609
Ran for 129050 frames Cell Events: 5935 mean_circ: 0.943609
Ran for 129550 frames Cell Events: 5969 mean_circ: 0.943636
Ran for 130050 frames Cell Events: 6000 mean_circ: 0.943645
Ran for 131550 frames Cell Events: 6072 mean_circ: 0.943615
Ran for 132050 frames Cell Events: 6090 mean_circ: 0.943664
Ran for 132550 frames Cell Events: 6108 mean_circ: 0.943664
Ran for 133050 frames Cell Events: 6144 mean_circ: 0.943672
Ran for 133550 frames Cell Events: 6165 mean_circ: 0.943634
Ran for 134050 frames Cell Events: 6188 mean_circ: 0.94365
Ran for 134550 frames Cell Events: 6228 mean_circ: 0.943627
Ran for 135550 frames Cell Events: 6284 mean_circ: 0.943549
Ran for 136050 frames Cell Events: 6299 mean_circ: 0.943581
Ran for 136550 frames Cell Events: 6334 mean_circ: 0.94354
Ran for 137050 frames Cell Events: 6366 mean_circ: 0.94359
Ran for 137550 frames Cell Events: 6382 mean_circ: 0.943615
Ran for 138050 frames Cell Events: 6406 mean_circ: 0.943575
Ran for 138550 frames Cell Events: 6426 mean_circ: 0.94355
Ran for 139550 frames Cell Events: 6476 mean_circ: 0.943541
Ran for 140050 frames Cell Events: 6491 mean_circ: 0.94356
Ran for 140550 frames Cell Events: 6502 mean_circ: 0.943568
Ran for 141050 frames Cell Events: 6516 mean_circ: 0.94359
Ran for 141550 frames Cell Events: 6542 mean_circ: 0.943514
Ran for 142050 frames Cell Events: 6579 mean_circ: 0.943442
Ran for 143050 frames Cell Events: 6634 mean_circ: 0.943562
Ran for 143550 frames Cell Events: 6647 mean_circ: 0.943527
Ran for 144550 frames Cell Events: 6689 mean_circ: 0.943577
Ran for 146050 frames Cell Events: 6762 mean_circ: 0.943455
Ran for 146550 frames Cell Events: 6782 mean_circ: 0.94346
Ran for 147050 frames Cell Events: 6801 mean_circ: 0.943489
Ran for 148050 frames Cell Events: 6838 mean_circ: 0.943461
Ran for 148550 frames Cell Events: 6856 mean_circ: 0.943427
Ran for 149050 frames Cell Events: 6889 mean_circ: 0.943444
Ran for 150050 frames Cell Events: 6932 mean_circ: 0.943453
Ran for 150550 frames Cell Events: 6958 mean_circ: 0.943323
Ran for 151550 frames Cell Events: 7023 mean_circ: 0.943276
Ran for 152050 frames Cell Events: 7046 mean_circ: 0.943311
Ran for 152550 frames Cell Events: 7075 mean_circ: 0.943312
Ran for 153550 frames Cell Events: 7115 mean_circ: 0.943279
Ran for 154050 frames Cell Events: 7135 mean_circ: 0.943289
Ran for 155050 frames Cell Events: 7184 mean_circ: 0.943265
Ran for 156550 frames Cell Events: 7269 mean_circ: 0.943317
Ran for 157050 frames Cell Events: 7292 mean_circ: 0.943321
Ran for 159050 frames Cell Events: 7414 mean_circ: 0.94342
Ran for 161550 frames Cell Events: 7570 mean_circ: 0.943281
Ran for 162550 frames Cell Events: 7627 mean_circ: 0.943324
Ran for 163550 frames Cell Events: 7689 mean_circ: 0.943244
Ran for 164550 frames Cell Events: 7742 mean_circ: 0.943205
Ran for 165050 frames Cell Events: 7767 mean_circ: 0.9432
Ran for 167050 frames Cell Events: 7893 mean_circ: 0.943099
Ran for 169550 frames Cell Events: 8029 mean_circ: 0.943236
Ran for 170050 frames Cell Events: 8051 mean_circ: 0.943173
Ran for 171050 frames Cell Events: 8100 mean_circ: 0.943113
Ran for 172050 frames Cell Events: 8148 mean_circ: 0.943139
Ran for 172550 frames Cell Events: 8176 mean_circ: 0.943098
Ran for 174050 frames Cell Events: 8265 mean_circ: 0.943097
Ran for 174550 frames Cell Events: 8287 mean_circ: 0.94306
Ran for 175050 frames Cell Events: 8310 mean_circ: 0.943064
Ran for 175550 frames Cell Events: 8339 mean_circ: 0.943066
Ran for 177050 frames Cell Events: 8426 mean_circ: 0.943069
Ran for 177550 frames Cell Events: 8438 mean_circ: 0.943101
Ran for 178050 frames Cell Events: 8454 mean_circ: 0.943103
Ran for 178550 frames Cell Events: 8469 mean_circ: 0.943119
Ran for 179050 frames Cell Events: 8490 mean_circ: 0.943089
Ran for 179550 frames Cell Events: 8509 mean_circ: 0.943047
Ran for 180050 frames Cell Events: 8531 mean_circ: 0.943011
Ran for 180550 frames Cell Events: 8549 mean_circ: 0.943033
Ran for 181550 frames Cell Events: 8581 mean_circ: 0.942988
Ran for 182050 frames Cell Events: 8612 mean_circ: 0.943022
Ran for 183050 frames Cell Events: 8651 mean_circ: 0.943049
Ran for 186050 frames Cell Events: 8815 mean_circ: 0.942969
Ran for 186550 frames Cell Events: 8843 mean_circ: 0.942968
Ran for 187050 frames Cell Events: 8875 mean_circ: 0.943
Ran for 188550 frames Cell Events: 8946 mean_circ: 0.942979
Ran for 189050 frames Cell Events: 8971 mean_circ: 0.942959
Ran for 189550 frames Cell Events: 8989 mean_circ: 0.942952
Ran for 190050 frames Cell Events: 9028 mean_circ: 0.942882
Ran for 190550 frames Cell Events: 9058 mean_circ: 0.9429
Ran for 192050 frames Cell Events: 9154 mean_circ: 0.942899
Ran for 193050 frames Cell Events: 9203 mean_circ: 0.942917
Ran for 194050 frames Cell Events: 9243 mean_circ: 0.943
Ran for 194550 frames Cell Events: 9277 mean_circ: 0.942938
Ran for 195050 frames Cell Events: 9300 mean_circ: 0.942899
Ran for 195550 frames Cell Events: 9317 mean_circ: 0.942923
Ran for 196550 frames Cell Events: 9382 mean_circ: 0.942924
Ran for 198050 frames Cell Events: 9455 mean_circ: 0.942942
Ran for 199050 frames Cell Events: 9508 mean_circ: 0.942971
Ran for 200550 frames Cell Events: 9573 mean_circ: 0.942931
Ran for 201050 frames Cell Events: 9591 mean_circ: 0.942921
Ran for 201550 frames Cell Events: 9608 mean_circ: 0.942952
Ran for 202050 frames Cell Events: 9630 mean_circ: 0.942963
Ran for 204050 frames Cell Events: 9741 mean_circ: 0.942965
Ran for 204550 frames Cell Events: 9764 mean_circ: 0.942979
Ran for 205550 frames Cell Events: 9817 mean_circ: 0.942943
Ran for 206550 frames Cell Events: 9886 mean_circ: 0.942974
Ran for 208050 frames Cell Events: 9936 mean_circ: 0.942993
Ran for 208550 frames Cell Events: 9963 mean_circ: 0.942998
Ran for 209050 frames Cell Events: 9986 mean_circ: 0.94299
End this measurment.
because stop condition (time/nr of cells) was met
Stopping time: 3.72725e+008
****************************************
Measurement finished
Mean Circularitiy: 0.942977
Mean Area: 609.974
Mean FL-1 intensity: 3369.88
Mean FL-2 intensity: 4085.18
Mean FL-3 intensity: 0
frames processed: 208258
Total Time: 104780ms
Number of Runs (new bg img) 0
Frames collected: 209389
Skipped frames: 54401
Rescued Frames: 2489877
Samples DAQ: 52349420
Samples written: 104694678
Samples per Channel: 52347339
FPS: 1998.37
Samples per second: 499594
Expected samples/s: 500000
Events: 10002
Events per second: 95.4574
jumped back (PMT): 5195
#Frames read, frequency
# 0 frames :299162
# 1 frames :103204
# 2 frames :4257
# 3 frames :1397
# 4 frames :608
# 5 frames :226
# 6 frames :3501
# 7 frames :1518
# 8 frames :1458
# 9 frames :651
# 10 frames :500
# 11 frames :306
# 12 frames :328
# 13 frames :194
# 14 frames :328
# 15 frames :224
# 16 frames :122
# 17 frames :111
# 18 frames :72
# 19 frames :42
# 20 frames :88
# 21 frames :50
# 22 frames :59
# 23 frames :46
# 24 frames :41
# 25 frames :17
# 26 frames :22
# 27 frames :19
# 28 frames :18
# 29 frames :20
# 30 frames :8
# 31 frames :7
# 32 frames :7
# 33 frames :7
# 34 frames :4
# 35 frames :9
# 36 frames :8
# 37 frames :2
# 38 frames :2
# 39 frames :2
# 40 frames :2
# 42 frames :1
# 43 frames :1
# 45 frames :3
# 76 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 26.3
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0