Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-09_18.41.47
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "900b1b2e6d1394d809d92b86590ee3f7",
"name": "M1_20170519_1649_dsRNA_M1_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "16:42:03"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 26.6595
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 3.76014e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.927457
Ran for 550 frames Cell Events: 8 mean_circ: 0.898926
Ran for 1050 frames Cell Events: 21 mean_circ: 0.907377
Ran for 3050 frames Cell Events: 50 mean_circ: 0.912219
Ran for 3550 frames Cell Events: 63 mean_circ: 0.917389
Ran for 4050 frames Cell Events: 76 mean_circ: 0.919289
Ran for 5550 frames Cell Events: 118 mean_circ: 0.922238
Ran for 6550 frames Cell Events: 136 mean_circ: 0.922219
Ran for 7050 frames Cell Events: 145 mean_circ: 0.920143
Ran for 8050 frames Cell Events: 159 mean_circ: 0.920366
Ran for 9050 frames Cell Events: 181 mean_circ: 0.915945
Ran for 9550 frames Cell Events: 185 mean_circ: 0.916022
Ran for 10050 frames Cell Events: 209 mean_circ: 0.916317
Ran for 10550 frames Cell Events: 232 mean_circ: 0.917029
Ran for 11050 frames Cell Events: 269 mean_circ: 0.914584
Ran for 12050 frames Cell Events: 309 mean_circ: 0.911649
Ran for 12550 frames Cell Events: 329 mean_circ: 0.913002
Ran for 13550 frames Cell Events: 360 mean_circ: 0.913463
Ran for 14050 frames Cell Events: 365 mean_circ: 0.913866
Ran for 14550 frames Cell Events: 375 mean_circ: 0.914306
Ran for 15050 frames Cell Events: 380 mean_circ: 0.914606
Ran for 15550 frames Cell Events: 390 mean_circ: 0.914453
Ran for 16050 frames Cell Events: 397 mean_circ: 0.914563
Ran for 16550 frames Cell Events: 403 mean_circ: 0.914941
Ran for 17050 frames Cell Events: 416 mean_circ: 0.915061
Ran for 17550 frames Cell Events: 420 mean_circ: 0.914787
Ran for 18050 frames Cell Events: 427 mean_circ: 0.914761
Ran for 18550 frames Cell Events: 441 mean_circ: 0.914961
Ran for 19050 frames Cell Events: 449 mean_circ: 0.913922
Ran for 19550 frames Cell Events: 461 mean_circ: 0.914543
Ran for 20050 frames Cell Events: 470 mean_circ: 0.915075
Ran for 20550 frames Cell Events: 479 mean_circ: 0.915252
Ran for 21050 frames Cell Events: 488 mean_circ: 0.914635
Ran for 21550 frames Cell Events: 495 mean_circ: 0.914872
Ran for 22050 frames Cell Events: 501 mean_circ: 0.914737
Ran for 22550 frames Cell Events: 511 mean_circ: 0.914833
Ran for 23550 frames Cell Events: 526 mean_circ: 0.914994
Ran for 24050 frames Cell Events: 540 mean_circ: 0.914292
Ran for 24550 frames Cell Events: 547 mean_circ: 0.914565
Ran for 25050 frames Cell Events: 560 mean_circ: 0.914806
Ran for 26050 frames Cell Events: 593 mean_circ: 0.914352
Ran for 26550 frames Cell Events: 603 mean_circ: 0.914811
Ran for 27550 frames Cell Events: 637 mean_circ: 0.914992
Ran for 29050 frames Cell Events: 679 mean_circ: 0.914403
Ran for 30050 frames Cell Events: 709 mean_circ: 0.914335
Ran for 30550 frames Cell Events: 721 mean_circ: 0.914644
Ran for 31050 frames Cell Events: 734 mean_circ: 0.914686
Ran for 31550 frames Cell Events: 743 mean_circ: 0.914769
Ran for 32050 frames Cell Events: 756 mean_circ: 0.914634
Ran for 32550 frames Cell Events: 765 mean_circ: 0.914658
Ran for 33050 frames Cell Events: 775 mean_circ: 0.914808
Ran for 33550 frames Cell Events: 780 mean_circ: 0.914777
Ran for 34050 frames Cell Events: 793 mean_circ: 0.915151
Ran for 34550 frames Cell Events: 808 mean_circ: 0.915242
Ran for 35050 frames Cell Events: 818 mean_circ: 0.915207
Ran for 35550 frames Cell Events: 825 mean_circ: 0.915279
Ran for 36050 frames Cell Events: 831 mean_circ: 0.915237
Ran for 36550 frames Cell Events: 842 mean_circ: 0.915196
Ran for 37050 frames Cell Events: 848 mean_circ: 0.915366
Ran for 37550 frames Cell Events: 860 mean_circ: 0.915366
Ran for 38550 frames Cell Events: 877 mean_circ: 0.915291
Ran for 39050 frames Cell Events: 891 mean_circ: 0.91527
Ran for 39550 frames Cell Events: 899 mean_circ: 0.915564
Ran for 40050 frames Cell Events: 907 mean_circ: 0.915735
Ran for 40550 frames Cell Events: 923 mean_circ: 0.916031
Ran for 41050 frames Cell Events: 931 mean_circ: 0.915898
Ran for 41550 frames Cell Events: 941 mean_circ: 0.915756
Ran for 42050 frames Cell Events: 947 mean_circ: 0.915545
Ran for 42550 frames Cell Events: 955 mean_circ: 0.915344
Ran for 43550 frames Cell Events: 977 mean_circ: 0.915065
Ran for 44050 frames Cell Events: 992 mean_circ: 0.915072
Ran for 44550 frames Cell Events: 1004 mean_circ: 0.915102
Ran for 45050 frames Cell Events: 1014 mean_circ: 0.915221
Ran for 45550 frames Cell Events: 1024 mean_circ: 0.915275
Ran for 46050 frames Cell Events: 1031 mean_circ: 0.91529
Ran for 46550 frames Cell Events: 1041 mean_circ: 0.915217
Ran for 47050 frames Cell Events: 1050 mean_circ: 0.915329
Ran for 47550 frames Cell Events: 1065 mean_circ: 0.915369
Ran for 48050 frames Cell Events: 1076 mean_circ: 0.915323
Ran for 48550 frames Cell Events: 1094 mean_circ: 0.915252
Ran for 49550 frames Cell Events: 1115 mean_circ: 0.91566
Ran for 50050 frames Cell Events: 1134 mean_circ: 0.91559
Ran for 50550 frames Cell Events: 1145 mean_circ: 0.915652
Ran for 51050 frames Cell Events: 1160 mean_circ: 0.915553
Ran for 51550 frames Cell Events: 1171 mean_circ: 0.915696
Ran for 52050 frames Cell Events: 1183 mean_circ: 0.915635
Ran for 52550 frames Cell Events: 1192 mean_circ: 0.915511
Ran for 53050 frames Cell Events: 1199 mean_circ: 0.9155
Ran for 53550 frames Cell Events: 1209 mean_circ: 0.915548
Ran for 54050 frames Cell Events: 1223 mean_circ: 0.91547
Ran for 54550 frames Cell Events: 1238 mean_circ: 0.915435
Ran for 55050 frames Cell Events: 1250 mean_circ: 0.915516
Ran for 56050 frames Cell Events: 1264 mean_circ: 0.915303
Ran for 56550 frames Cell Events: 1281 mean_circ: 0.915428
Ran for 57050 frames Cell Events: 1293 mean_circ: 0.915499
Ran for 57550 frames Cell Events: 1306 mean_circ: 0.915665
Ran for 58050 frames Cell Events: 1313 mean_circ: 0.91565
Ran for 58550 frames Cell Events: 1322 mean_circ: 0.91552
Ran for 59050 frames Cell Events: 1337 mean_circ: 0.915494
Ran for 59550 frames Cell Events: 1344 mean_circ: 0.915607
Ran for 60050 frames Cell Events: 1356 mean_circ: 0.915747
Ran for 61050 frames Cell Events: 1375 mean_circ: 0.915916
Ran for 61550 frames Cell Events: 1383 mean_circ: 0.915822
Ran for 62050 frames Cell Events: 1390 mean_circ: 0.91581
Ran for 62550 frames Cell Events: 1397 mean_circ: 0.915902
Ran for 64050 frames Cell Events: 1430 mean_circ: 0.915641
Ran for 64550 frames Cell Events: 1445 mean_circ: 0.915508
Ran for 65050 frames Cell Events: 1450 mean_circ: 0.915571
Ran for 66050 frames Cell Events: 1470 mean_circ: 0.915737
Ran for 67050 frames Cell Events: 1487 mean_circ: 0.915851
Ran for 67550 frames Cell Events: 1500 mean_circ: 0.915869
Ran for 68050 frames Cell Events: 1507 mean_circ: 0.915747
Ran for 68550 frames Cell Events: 1516 mean_circ: 0.91587
Ran for 69050 frames Cell Events: 1528 mean_circ: 0.915754
Ran for 69550 frames Cell Events: 1541 mean_circ: 0.915812
Ran for 70050 frames Cell Events: 1548 mean_circ: 0.91589
Ran for 70550 frames Cell Events: 1562 mean_circ: 0.9158
Ran for 71050 frames Cell Events: 1573 mean_circ: 0.915703
Ran for 71550 frames Cell Events: 1585 mean_circ: 0.915656
Ran for 72050 frames Cell Events: 1595 mean_circ: 0.915662
Ran for 73050 frames Cell Events: 1612 mean_circ: 0.915504
Ran for 73550 frames Cell Events: 1627 mean_circ: 0.915301
Ran for 74050 frames Cell Events: 1638 mean_circ: 0.915305
Ran for 75050 frames Cell Events: 1658 mean_circ: 0.915313
Ran for 75550 frames Cell Events: 1667 mean_circ: 0.915271
Ran for 76550 frames Cell Events: 1684 mean_circ: 0.915339
Ran for 77050 frames Cell Events: 1692 mean_circ: 0.915332
Ran for 77550 frames Cell Events: 1703 mean_circ: 0.915391
Ran for 78050 frames Cell Events: 1711 mean_circ: 0.915452
Ran for 79050 frames Cell Events: 1737 mean_circ: 0.915237
Ran for 79550 frames Cell Events: 1745 mean_circ: 0.915162
Ran for 80050 frames Cell Events: 1757 mean_circ: 0.915171
Ran for 81550 frames Cell Events: 1774 mean_circ: 0.915166
Ran for 82050 frames Cell Events: 1780 mean_circ: 0.915151
Ran for 82550 frames Cell Events: 1790 mean_circ: 0.914974
Ran for 83050 frames Cell Events: 1797 mean_circ: 0.915029
Ran for 83550 frames Cell Events: 1807 mean_circ: 0.915074
Ran for 84550 frames Cell Events: 1818 mean_circ: 0.915026
Ran for 85050 frames Cell Events: 1826 mean_circ: 0.91491
Ran for 86050 frames Cell Events: 1847 mean_circ: 0.914981
Ran for 86550 frames Cell Events: 1850 mean_circ: 0.914978
Ran for 87050 frames Cell Events: 1854 mean_circ: 0.91495
Ran for 87550 frames Cell Events: 1867 mean_circ: 0.914967
Ran for 88050 frames Cell Events: 1879 mean_circ: 0.915068
Ran for 88550 frames Cell Events: 1890 mean_circ: 0.914875
Ran for 89550 frames Cell Events: 1915 mean_circ: 0.915011
Ran for 90050 frames Cell Events: 1925 mean_circ: 0.915023
Ran for 90550 frames Cell Events: 1933 mean_circ: 0.914978
Ran for 91050 frames Cell Events: 1946 mean_circ: 0.914778
Ran for 91550 frames Cell Events: 1955 mean_circ: 0.91471
Ran for 92050 frames Cell Events: 1972 mean_circ: 0.914554
Ran for 92550 frames Cell Events: 1980 mean_circ: 0.914388
Ran for 93050 frames Cell Events: 1991 mean_circ: 0.914408
Ran for 93550 frames Cell Events: 2003 mean_circ: 0.914502
Ran for 94050 frames Cell Events: 2013 mean_circ: 0.914579
Ran for 94550 frames Cell Events: 2027 mean_circ: 0.914618
Ran for 95050 frames Cell Events: 2035 mean_circ: 0.914643
Ran for 95550 frames Cell Events: 2047 mean_circ: 0.914775
Ran for 96050 frames Cell Events: 2056 mean_circ: 0.914769
Ran for 97550 frames Cell Events: 2083 mean_circ: 0.914897
Ran for 98050 frames Cell Events: 2096 mean_circ: 0.914925
Ran for 99050 frames Cell Events: 2115 mean_circ: 0.914959
Ran for 99550 frames Cell Events: 2128 mean_circ: 0.914994
Ran for 100050 frames Cell Events: 2134 mean_circ: 0.914885
Ran for 100550 frames Cell Events: 2144 mean_circ: 0.914984
Ran for 101050 frames Cell Events: 2151 mean_circ: 0.914965
Ran for 101550 frames Cell Events: 2157 mean_circ: 0.91495
Ran for 102050 frames Cell Events: 2164 mean_circ: 0.914883
Ran for 102550 frames Cell Events: 2169 mean_circ: 0.914868
Ran for 103050 frames Cell Events: 2174 mean_circ: 0.914903
Ran for 104050 frames Cell Events: 2202 mean_circ: 0.915008
Ran for 104550 frames Cell Events: 2212 mean_circ: 0.91496
Ran for 105050 frames Cell Events: 2220 mean_circ: 0.914972
Ran for 105550 frames Cell Events: 2230 mean_circ: 0.914907
Ran for 106550 frames Cell Events: 2263 mean_circ: 0.915019
Ran for 107050 frames Cell Events: 2273 mean_circ: 0.915006
Ran for 107550 frames Cell Events: 2287 mean_circ: 0.915141
Ran for 108050 frames Cell Events: 2297 mean_circ: 0.914962
Ran for 108550 frames Cell Events: 2309 mean_circ: 0.914897
Ran for 109550 frames Cell Events: 2322 mean_circ: 0.914912
Ran for 110050 frames Cell Events: 2341 mean_circ: 0.915001
Ran for 110550 frames Cell Events: 2345 mean_circ: 0.915037
Ran for 111050 frames Cell Events: 2353 mean_circ: 0.915049
Ran for 111550 frames Cell Events: 2360 mean_circ: 0.915039
Ran for 112050 frames Cell Events: 2368 mean_circ: 0.915086
Ran for 112550 frames Cell Events: 2388 mean_circ: 0.915247
Ran for 113050 frames Cell Events: 2400 mean_circ: 0.915158
Ran for 113550 frames Cell Events: 2408 mean_circ: 0.915157
Ran for 114050 frames Cell Events: 2414 mean_circ: 0.915191
Ran for 114550 frames Cell Events: 2420 mean_circ: 0.914976
Ran for 115050 frames Cell Events: 2432 mean_circ: 0.915015
Ran for 115550 frames Cell Events: 2435 mean_circ: 0.914837
Ran for 116050 frames Cell Events: 2442 mean_circ: 0.914886
Ran for 116550 frames Cell Events: 2455 mean_circ: 0.914854
Ran for 117050 frames Cell Events: 2469 mean_circ: 0.914868
Ran for 117550 frames Cell Events: 2483 mean_circ: 0.915001
Ran for 118550 frames Cell Events: 2500 mean_circ: 0.914958
Ran for 119050 frames Cell Events: 2507 mean_circ: 0.914975
Ran for 119550 frames Cell Events: 2517 mean_circ: 0.91501
Ran for 120050 frames Cell Events: 2522 mean_circ: 0.915
Ran for 120550 frames Cell Events: 2532 mean_circ: 0.915035
Ran for 121050 frames Cell Events: 2541 mean_circ: 0.914918
Ran for 121550 frames Cell Events: 2556 mean_circ: 0.914793
Ran for 122050 frames Cell Events: 2569 mean_circ: 0.914655
Ran for 122550 frames Cell Events: 2574 mean_circ: 0.914694
Ran for 123050 frames Cell Events: 2585 mean_circ: 0.914547
Ran for 123550 frames Cell Events: 2599 mean_circ: 0.91447
Ran for 124050 frames Cell Events: 2615 mean_circ: 0.914531
Ran for 124550 frames Cell Events: 2621 mean_circ: 0.914461
Ran for 125050 frames Cell Events: 2628 mean_circ: 0.914434
Ran for 126050 frames Cell Events: 2651 mean_circ: 0.914305
Ran for 126550 frames Cell Events: 2658 mean_circ: 0.914301
Ran for 127050 frames Cell Events: 2662 mean_circ: 0.914268
Ran for 127550 frames Cell Events: 2677 mean_circ: 0.914263
Ran for 128050 frames Cell Events: 2689 mean_circ: 0.914234
Ran for 128550 frames Cell Events: 2699 mean_circ: 0.914264
Ran for 129050 frames Cell Events: 2712 mean_circ: 0.914347
Ran for 129550 frames Cell Events: 2724 mean_circ: 0.914311
Ran for 130550 frames Cell Events: 2754 mean_circ: 0.914401
Ran for 131550 frames Cell Events: 2802 mean_circ: 0.914674
Ran for 132050 frames Cell Events: 2810 mean_circ: 0.91475
Ran for 132550 frames Cell Events: 2817 mean_circ: 0.914786
Ran for 133050 frames Cell Events: 2822 mean_circ: 0.914785
Ran for 133550 frames Cell Events: 2837 mean_circ: 0.914889
Ran for 134050 frames Cell Events: 2847 mean_circ: 0.914975
Ran for 134550 frames Cell Events: 2858 mean_circ: 0.914916
Ran for 135050 frames Cell Events: 2868 mean_circ: 0.914959
Ran for 135550 frames Cell Events: 2877 mean_circ: 0.915006
Ran for 136050 frames Cell Events: 2896 mean_circ: 0.914928
Ran for 137550 frames Cell Events: 2940 mean_circ: 0.914804
Ran for 138050 frames Cell Events: 2956 mean_circ: 0.914804
Ran for 139050 frames Cell Events: 2976 mean_circ: 0.914634
Ran for 139550 frames Cell Events: 2981 mean_circ: 0.914686
Ran for 140050 frames Cell Events: 2995 mean_circ: 0.914224
Ran for 141050 frames Cell Events: 3015 mean_circ: 0.914339
Ran for 141550 frames Cell Events: 3023 mean_circ: 0.914365
Ran for 142050 frames Cell Events: 3035 mean_circ: 0.914416
Ran for 143050 frames Cell Events: 3048 mean_circ: 0.91446
Ran for 144550 frames Cell Events: 3085 mean_circ: 0.914538
Ran for 145050 frames Cell Events: 3098 mean_circ: 0.914412
Ran for 145550 frames Cell Events: 3108 mean_circ: 0.914407
Ran for 146050 frames Cell Events: 3119 mean_circ: 0.914426
Ran for 147550 frames Cell Events: 3197 mean_circ: 0.914861
Ran for 148050 frames Cell Events: 3214 mean_circ: 0.914772
Ran for 148550 frames Cell Events: 3223 mean_circ: 0.914699
Ran for 149050 frames Cell Events: 3240 mean_circ: 0.914703
Ran for 149550 frames Cell Events: 3249 mean_circ: 0.914756
Ran for 150050 frames Cell Events: 3258 mean_circ: 0.914767
Ran for 150550 frames Cell Events: 3265 mean_circ: 0.914711
Ran for 151050 frames Cell Events: 3276 mean_circ: 0.914697
Ran for 151550 frames Cell Events: 3287 mean_circ: 0.914743
Ran for 152050 frames Cell Events: 3310 mean_circ: 0.91484
Ran for 153050 frames Cell Events: 3336 mean_circ: 0.914887
Ran for 153550 frames Cell Events: 3349 mean_circ: 0.914793
Ran for 154050 frames Cell Events: 3362 mean_circ: 0.914827
Ran for 154550 frames Cell Events: 3365 mean_circ: 0.91482
Ran for 155050 frames Cell Events: 3376 mean_circ: 0.914834
Ran for 155550 frames Cell Events: 3381 mean_circ: 0.914847
Ran for 156550 frames Cell Events: 3411 mean_circ: 0.914662
Ran for 157050 frames Cell Events: 3415 mean_circ: 0.914616
Ran for 157550 frames Cell Events: 3426 mean_circ: 0.914592
Ran for 158050 frames Cell Events: 3446 mean_circ: 0.914754
Ran for 158550 frames Cell Events: 3454 mean_circ: 0.914774
Ran for 159050 frames Cell Events: 3464 mean_circ: 0.91474
Ran for 160050 frames Cell Events: 3497 mean_circ: 0.914827
Ran for 160550 frames Cell Events: 3511 mean_circ: 0.914925
Ran for 161050 frames Cell Events: 3523 mean_circ: 0.91499
Ran for 162050 frames Cell Events: 3535 mean_circ: 0.914993
Ran for 162550 frames Cell Events: 3549 mean_circ: 0.915098
Ran for 163050 frames Cell Events: 3556 mean_circ: 0.915029
Ran for 163550 frames Cell Events: 3563 mean_circ: 0.915034
Ran for 164050 frames Cell Events: 3572 mean_circ: 0.914997
Ran for 165050 frames Cell Events: 3592 mean_circ: 0.915013
Ran for 165550 frames Cell Events: 3605 mean_circ: 0.914959
Ran for 166050 frames Cell Events: 3618 mean_circ: 0.915037
Ran for 166550 frames Cell Events: 3623 mean_circ: 0.915051
Ran for 167050 frames Cell Events: 3637 mean_circ: 0.915028
Ran for 168050 frames Cell Events: 3656 mean_circ: 0.915116
Ran for 168550 frames Cell Events: 3670 mean_circ: 0.914991
Ran for 169050 frames Cell Events: 3676 mean_circ: 0.915019
Ran for 169550 frames Cell Events: 3686 mean_circ: 0.914971
Ran for 170050 frames Cell Events: 3696 mean_circ: 0.914833
Ran for 170550 frames Cell Events: 3704 mean_circ: 0.914764
Ran for 171050 frames Cell Events: 3714 mean_circ: 0.914699
Ran for 171550 frames Cell Events: 3723 mean_circ: 0.914704
Ran for 172050 frames Cell Events: 3735 mean_circ: 0.914751
Ran for 172550 frames Cell Events: 3745 mean_circ: 0.914659
Ran for 173050 frames Cell Events: 3760 mean_circ: 0.914722
Ran for 174550 frames Cell Events: 3793 mean_circ: 0.914739
Ran for 175050 frames Cell Events: 3801 mean_circ: 0.914781
Ran for 175550 frames Cell Events: 3813 mean_circ: 0.91476
Ran for 176050 frames Cell Events: 3821 mean_circ: 0.914758
Ran for 176550 frames Cell Events: 3827 mean_circ: 0.914721
Ran for 177050 frames Cell Events: 3835 mean_circ: 0.914716
Ran for 177550 frames Cell Events: 3850 mean_circ: 0.914667
Ran for 178050 frames Cell Events: 3865 mean_circ: 0.914687
Ran for 178550 frames Cell Events: 3876 mean_circ: 0.914649
Ran for 179050 frames Cell Events: 3884 mean_circ: 0.914663
Ran for 179550 frames Cell Events: 3896 mean_circ: 0.9147
Ran for 180050 frames Cell Events: 3905 mean_circ: 0.914713
Ran for 181050 frames Cell Events: 3929 mean_circ: 0.914684
Ran for 181550 frames Cell Events: 3941 mean_circ: 0.914688
Ran for 182050 frames Cell Events: 3951 mean_circ: 0.914595
Ran for 182550 frames Cell Events: 3966 mean_circ: 0.914713
Ran for 183050 frames Cell Events: 3973 mean_circ: 0.914764
Ran for 183550 frames Cell Events: 3986 mean_circ: 0.914759
Ran for 184050 frames Cell Events: 3999 mean_circ: 0.914817
Ran for 184550 frames Cell Events: 4014 mean_circ: 0.914762
Ran for 185050 frames Cell Events: 4024 mean_circ: 0.914754
Ran for 185550 frames Cell Events: 4044 mean_circ: 0.914704
Ran for 186050 frames Cell Events: 4054 mean_circ: 0.914709
Ran for 186550 frames Cell Events: 4070 mean_circ: 0.914697
Ran for 187050 frames Cell Events: 4080 mean_circ: 0.9147
Ran for 187550 frames Cell Events: 4093 mean_circ: 0.914728
Ran for 188050 frames Cell Events: 4106 mean_circ: 0.914597
Ran for 188550 frames Cell Events: 4113 mean_circ: 0.914611
Ran for 190050 frames Cell Events: 4155 mean_circ: 0.914535
Ran for 190550 frames Cell Events: 4161 mean_circ: 0.914542
Ran for 191550 frames Cell Events: 4182 mean_circ: 0.91447
Ran for 192050 frames Cell Events: 4191 mean_circ: 0.91433
Ran for 192550 frames Cell Events: 4201 mean_circ: 0.914291
Ran for 193050 frames Cell Events: 4213 mean_circ: 0.914331
Ran for 193550 frames Cell Events: 4223 mean_circ: 0.914381
Ran for 194050 frames Cell Events: 4232 mean_circ: 0.914247
Ran for 194550 frames Cell Events: 4239 mean_circ: 0.914214
Ran for 196050 frames Cell Events: 4272 mean_circ: 0.914171
Ran for 196550 frames Cell Events: 4283 mean_circ: 0.914172
Ran for 197050 frames Cell Events: 4299 mean_circ: 0.914201
Ran for 198050 frames Cell Events: 4316 mean_circ: 0.914212
Ran for 198550 frames Cell Events: 4331 mean_circ: 0.914283
Ran for 199050 frames Cell Events: 4340 mean_circ: 0.91425
Ran for 199550 frames Cell Events: 4350 mean_circ: 0.91431
Ran for 201050 frames Cell Events: 4382 mean_circ: 0.914175
Ran for 201550 frames Cell Events: 4395 mean_circ: 0.914079
Ran for 202050 frames Cell Events: 4405 mean_circ: 0.914118
Ran for 202550 frames Cell Events: 4411 mean_circ: 0.914077
Ran for 203550 frames Cell Events: 4436 mean_circ: 0.914071
Ran for 204550 frames Cell Events: 4470 mean_circ: 0.914032
Ran for 205550 frames Cell Events: 4488 mean_circ: 0.913854
Ran for 206050 frames Cell Events: 4495 mean_circ: 0.913837
Ran for 207050 frames Cell Events: 4515 mean_circ: 0.913775
Ran for 207550 frames Cell Events: 4523 mean_circ: 0.913751
Ran for 208050 frames Cell Events: 4525 mean_circ: 0.913744
Ran for 208550 frames Cell Events: 4533 mean_circ: 0.913729
Ran for 209050 frames Cell Events: 4545 mean_circ: 0.913673
Ran for 209550 frames Cell Events: 4549 mean_circ: 0.913693
Ran for 210050 frames Cell Events: 4561 mean_circ: 0.913682
Ran for 210550 frames Cell Events: 4582 mean_circ: 0.913663
Ran for 211550 frames Cell Events: 4604 mean_circ: 0.913619
Ran for 212550 frames Cell Events: 4622 mean_circ: 0.913631
Ran for 213050 frames Cell Events: 4631 mean_circ: 0.91359
Ran for 213550 frames Cell Events: 4644 mean_circ: 0.913597
Ran for 214050 frames Cell Events: 4647 mean_circ: 0.91364
Ran for 214550 frames Cell Events: 4658 mean_circ: 0.913572
Ran for 215050 frames Cell Events: 4677 mean_circ: 0.913514
Ran for 216050 frames Cell Events: 4704 mean_circ: 0.913504
Ran for 216550 frames Cell Events: 4711 mean_circ: 0.913523
Ran for 217050 frames Cell Events: 4721 mean_circ: 0.91353
Ran for 217550 frames Cell Events: 4736 mean_circ: 0.91352
Ran for 218050 frames Cell Events: 4744 mean_circ: 0.913494
Ran for 218550 frames Cell Events: 4751 mean_circ: 0.913492
Ran for 219050 frames Cell Events: 4758 mean_circ: 0.913434
Ran for 219550 frames Cell Events: 4766 mean_circ: 0.913486
Ran for 220050 frames Cell Events: 4786 mean_circ: 0.913555
Ran for 220550 frames Cell Events: 4797 mean_circ: 0.913473
Ran for 221050 frames Cell Events: 4809 mean_circ: 0.913476
Ran for 221550 frames Cell Events: 4814 mean_circ: 0.913441
Ran for 222050 frames Cell Events: 4822 mean_circ: 0.913456
Ran for 222550 frames Cell Events: 4830 mean_circ: 0.913491
Ran for 223050 frames Cell Events: 4845 mean_circ: 0.913507
Ran for 223550 frames Cell Events: 4853 mean_circ: 0.913509
Ran for 224550 frames Cell Events: 4885 mean_circ: 0.913649
Ran for 225050 frames Cell Events: 4894 mean_circ: 0.913675
Ran for 226050 frames Cell Events: 4916 mean_circ: 0.913738
Ran for 226550 frames Cell Events: 4930 mean_circ: 0.913706
Ran for 227550 frames Cell Events: 4957 mean_circ: 0.913725
Ran for 228050 frames Cell Events: 4969 mean_circ: 0.913731
Ran for 228550 frames Cell Events: 4980 mean_circ: 0.913743
Ran for 229550 frames Cell Events: 4992 mean_circ: 0.91376
Ran for 230050 frames Cell Events: 4997 mean_circ: 0.913764
Ran for 230550 frames Cell Events: 5008 mean_circ: 0.913814
Ran for 231550 frames Cell Events: 5035 mean_circ: 0.91388
Ran for 232050 frames Cell Events: 5044 mean_circ: 0.91379
Ran for 233550 frames Cell Events: 5081 mean_circ: 0.913803
Ran for 234550 frames Cell Events: 5112 mean_circ: 0.913797
Ran for 235050 frames Cell Events: 5119 mean_circ: 0.91379
Ran for 235550 frames Cell Events: 5125 mean_circ: 0.913758
Ran for 236550 frames Cell Events: 5136 mean_circ: 0.913773
Ran for 237050 frames Cell Events: 5144 mean_circ: 0.913755
Ran for 237550 frames Cell Events: 5155 mean_circ: 0.913803
Ran for 238550 frames Cell Events: 5187 mean_circ: 0.91392
Ran for 239050 frames Cell Events: 5195 mean_circ: 0.913932
Ran for 240550 frames Cell Events: 5246 mean_circ: 0.914044
Ran for 241050 frames Cell Events: 5259 mean_circ: 0.914044
Ran for 241550 frames Cell Events: 5278 mean_circ: 0.914107
End this measurment..
SRan for 242050 frames Cell Events: 5292 mean_circ: 0.914127
topping time: 3.76135e+008
****************************************
Measurement finished
Mean Circularitiy: 0.914129
Mean Area: 808.008
Mean FL-1 intensity: 3183.04
Mean FL-2 intensity: 4539.26
Mean FL-3 intensity: 0
frames processed: 239848
Total Time: 121097ms
Number of Runs (new bg img) 0
Frames collected: 242050
Skipped frames: 68687
Rescued Frames: 3311565
Samples DAQ: 60512626
Samples written: 121024752
Samples per Channel: 60512376
FPS: 1998.81
Samples per second: 499701
Expected samples/s: 500000
Events: 5292
Events per second: 43.7004
jumped back (PMT): 15
#Frames read, frequency
# 0 frames :308768
# 1 frames :161234
# 2 frames :4796
# 3 frames :1134
# 4 frames :616
# 5 frames :390
# 6 frames :1490
# 7 frames :2291
# 8 frames :1109
# 9 frames :596
# 10 frames :331
# 11 frames :219
# 12 frames :284
# 13 frames :189
# 14 frames :159
# 15 frames :96
# 16 frames :69
# 17 frames :63
# 18 frames :33
# 19 frames :21
# 20 frames :29
# 21 frames :27
# 22 frames :16
# 23 frames :17
# 24 frames :9
# 25 frames :9
# 26 frames :3
# 27 frames :5
# 28 frames :2
# 29 frames :4
# 30 frames :3
# 31 frames :7
# 32 frames :4
# 33 frames :1
# 35 frames :1
# 36 frames :1
# 37 frames :1
# 38 frames :2
# 40 frames :2
# 42 frames :2
# 43 frames :1
# 57 frames :1
# 89 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 26.6595
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0