Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-09_18.47.14
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "0779b0adc3ba64d990fa2c1fa458b95f",
"name": "M1_20170521_1450_dsRNA_M2_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "16:47:39"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 7998 (max 7999) in '7998'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.2361
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 5.41669e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 1 mean_circ: 0
Ran for 550 frames Cell Events: 4 mean_circ: 0.889332
Ran for 1050 frames Cell Events: 12 mean_circ: 0.933705
Ran for 2050 frames Cell Events: 32 mean_circ: 0.937331
Ran for 2550 frames Cell Events: 45 mean_circ: 0.936115
Ran for 3050 frames Cell Events: 57 mean_circ: 0.941268
Ran for 4050 frames Cell Events: 79 mean_circ: 0.945058
Ran for 4550 frames Cell Events: 89 mean_circ: 0.941248
Ran for 5050 frames Cell Events: 99 mean_circ: 0.938714
Ran for 5550 frames Cell Events: 106 mean_circ: 0.938298
Ran for 6050 frames Cell Events: 111 mean_circ: 0.937706
Ran for 6550 frames Cell Events: 123 mean_circ: 0.936176
Ran for 7050 frames Cell Events: 130 mean_circ: 0.935254
Ran for 7550 frames Cell Events: 137 mean_circ: 0.937019
Ran for 8050 frames Cell Events: 148 mean_circ: 0.93666
Ran for 8550 frames Cell Events: 155 mean_circ: 0.935779
Ran for 9550 frames Cell Events: 174 mean_circ: 0.936608
Ran for 10050 frames Cell Events: 184 mean_circ: 0.935513
Ran for 10550 frames Cell Events: 197 mean_circ: 0.935331
Ran for 11050 frames Cell Events: 206 mean_circ: 0.934205
Ran for 11550 frames Cell Events: 222 mean_circ: 0.934764
Ran for 12550 frames Cell Events: 246 mean_circ: 0.935203
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Ran for 22550 frames Cell Events: 441 mean_circ: 0.935066
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Ran for 24550 frames Cell Events: 479 mean_circ: 0.934188
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Ran for 26550 frames Cell Events: 508 mean_circ: 0.933838
Ran for 27050 frames Cell Events: 511 mean_circ: 0.933766
Ran for 27550 frames Cell Events: 527 mean_circ: 0.933744
Ran for 29050 frames Cell Events: 554 mean_circ: 0.933929
Ran for 30050 frames Cell Events: 564 mean_circ: 0.933851
Ran for 30550 frames Cell Events: 571 mean_circ: 0.933964
Ran for 31550 frames Cell Events: 594 mean_circ: 0.934113
Ran for 32050 frames Cell Events: 600 mean_circ: 0.93429
Ran for 32550 frames Cell Events: 610 mean_circ: 0.93402
Ran for 33050 frames Cell Events: 623 mean_circ: 0.934145
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Ran for 34050 frames Cell Events: 637 mean_circ: 0.933977
Ran for 35050 frames Cell Events: 668 mean_circ: 0.93348
Ran for 35550 frames Cell Events: 674 mean_circ: 0.93328
Ran for 36050 frames Cell Events: 681 mean_circ: 0.933167
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Ran for 39050 frames Cell Events: 737 mean_circ: 0.933032
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Ran for 40050 frames Cell Events: 755 mean_circ: 0.933032
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Ran for 42050 frames Cell Events: 801 mean_circ: 0.932725
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Ran for 55550 frames Cell Events: 1104 mean_circ: 0.932486
Ran for 56550 frames Cell Events: 1131 mean_circ: 0.932585
Ran for 57050 frames Cell Events: 1139 mean_circ: 0.932448
Ran for 57550 frames Cell Events: 1152 mean_circ: 0.932508
Ran for 58050 frames Cell Events: 1160 mean_circ: 0.932519
Ran for 58550 frames Cell Events: 1168 mean_circ: 0.93241
Ran for 59050 frames Cell Events: 1180 mean_circ: 0.932571
Ran for 59550 frames Cell Events: 1189 mean_circ: 0.932549
Ran for 61050 frames Cell Events: 1231 mean_circ: 0.932618
Ran for 61550 frames Cell Events: 1242 mean_circ: 0.932681
Ran for 62050 frames Cell Events: 1249 mean_circ: 0.932713
Ran for 62550 frames Cell Events: 1266 mean_circ: 0.932859
Ran for 63050 frames Cell Events: 1278 mean_circ: 0.932726
Ran for 63550 frames Cell Events: 1285 mean_circ: 0.93274
Ran for 64050 frames Cell Events: 1296 mean_circ: 0.932482
Ran for 65050 frames Cell Events: 1322 mean_circ: 0.93244
Ran for 65550 frames Cell Events: 1330 mean_circ: 0.93217
Ran for 66050 frames Cell Events: 1335 mean_circ: 0.932218
Ran for 66550 frames Cell Events: 1349 mean_circ: 0.932303
Ran for 67050 frames Cell Events: 1355 mean_circ: 0.932232
Ran for 67550 frames Cell Events: 1364 mean_circ: 0.932222
Ran for 68050 frames Cell Events: 1378 mean_circ: 0.93218
Ran for 68550 frames Cell Events: 1387 mean_circ: 0.932199
Ran for 69050 frames Cell Events: 1401 mean_circ: 0.932249
Ran for 69550 frames Cell Events: 1410 mean_circ: 0.93235
Ran for 70050 frames Cell Events: 1417 mean_circ: 0.932209
Ran for 70550 frames Cell Events: 1437 mean_circ: 0.93216
Ran for 71050 frames Cell Events: 1444 mean_circ: 0.932092
Ran for 71550 frames Cell Events: 1457 mean_circ: 0.932106
Ran for 72050 frames Cell Events: 1462 mean_circ: 0.93214
Ran for 72550 frames Cell Events: 1474 mean_circ: 0.932307
Ran for 73050 frames Cell Events: 1479 mean_circ: 0.932229
Ran for 74050 frames Cell Events: 1495 mean_circ: 0.932146
Ran for 74550 frames Cell Events: 1511 mean_circ: 0.932101
Ran for 75050 frames Cell Events: 1519 mean_circ: 0.932077
Ran for 76050 frames Cell Events: 1539 mean_circ: 0.931973
Ran for 76550 frames Cell Events: 1549 mean_circ: 0.932014
Ran for 77050 frames Cell Events: 1562 mean_circ: 0.932084
Ran for 77550 frames Cell Events: 1576 mean_circ: 0.931993
Ran for 78050 frames Cell Events: 1588 mean_circ: 0.932
Ran for 78550 frames Cell Events: 1597 mean_circ: 0.931833
Ran for 79050 frames Cell Events: 1611 mean_circ: 0.931822
Ran for 79550 frames Cell Events: 1621 mean_circ: 0.93169
Ran for 80550 frames Cell Events: 1653 mean_circ: 0.931711
Ran for 81050 frames Cell Events: 1668 mean_circ: 0.931666
Ran for 81550 frames Cell Events: 1672 mean_circ: 0.931698
Ran for 82050 frames Cell Events: 1682 mean_circ: 0.931771
Ran for 82550 frames Cell Events: 1699 mean_circ: 0.931829
Ran for 83050 frames Cell Events: 1705 mean_circ: 0.931885
Ran for 83550 frames Cell Events: 1710 mean_circ: 0.931908
Ran for 84550 frames Cell Events: 1730 mean_circ: 0.931917
Ran for 85050 frames Cell Events: 1745 mean_circ: 0.931999
Ran for 85550 frames Cell Events: 1763 mean_circ: 0.932031
Ran for 86050 frames Cell Events: 1773 mean_circ: 0.932
Ran for 87050 frames Cell Events: 1797 mean_circ: 0.931888
Ran for 87550 frames Cell Events: 1810 mean_circ: 0.931929
Ran for 88050 frames Cell Events: 1822 mean_circ: 0.9319
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Ran for 90050 frames Cell Events: 1868 mean_circ: 0.931755
Ran for 92050 frames Cell Events: 1927 mean_circ: 0.931142
Ran for 92550 frames Cell Events: 1938 mean_circ: 0.93101
Ran for 93550 frames Cell Events: 1965 mean_circ: 0.930834
Ran for 94550 frames Cell Events: 1981 mean_circ: 0.930731
Ran for 95050 frames Cell Events: 1992 mean_circ: 0.930718
Ran for 96050 frames Cell Events: 2015 mean_circ: 0.930923
Ran for 96550 frames Cell Events: 2029 mean_circ: 0.93082
Ran for 97550 frames Cell Events: 2045 mean_circ: 0.930899
Ran for 98050 frames Cell Events: 2055 mean_circ: 0.93089
Ran for 98550 frames Cell Events: 2060 mean_circ: 0.930851
Ran for 99050 frames Cell Events: 2069 mean_circ: 0.930886
Ran for 99550 frames Cell Events: 2077 mean_circ: 0.930809
Ran for 100050 frames Cell Events: 2087 mean_circ: 0.930901
Ran for 100550 frames Cell Events: 2105 mean_circ: 0.930942
Ran for 101550 frames Cell Events: 2127 mean_circ: 0.931001
Ran for 102550 frames Cell Events: 2149 mean_circ: 0.931005
Ran for 103050 frames Cell Events: 2158 mean_circ: 0.930943
Ran for 103550 frames Cell Events: 2174 mean_circ: 0.930742
Ran for 104050 frames Cell Events: 2187 mean_circ: 0.930787
Ran for 104550 frames Cell Events: 2204 mean_circ: 0.930787
Ran for 105050 frames Cell Events: 2221 mean_circ: 0.93083
Ran for 106050 frames Cell Events: 2235 mean_circ: 0.930793
Ran for 106550 frames Cell Events: 2243 mean_circ: 0.930822
Ran for 107050 frames Cell Events: 2251 mean_circ: 0.930741
Ran for 109050 frames Cell Events: 2311 mean_circ: 0.930486
Ran for 109550 frames Cell Events: 2328 mean_circ: 0.930397
Ran for 110050 frames Cell Events: 2337 mean_circ: 0.930431
Ran for 112050 frames Cell Events: 2383 mean_circ: 0.930411
Ran for 113050 frames Cell Events: 2406 mean_circ: 0.930518
Ran for 113550 frames Cell Events: 2423 mean_circ: 0.93051
Ran for 114050 frames Cell Events: 2440 mean_circ: 0.930611
Ran for 114550 frames Cell Events: 2457 mean_circ: 0.930733
Ran for 115050 frames Cell Events: 2463 mean_circ: 0.930733
Ran for 118550 frames Cell Events: 2541 mean_circ: 0.930398
Ran for 119550 frames Cell Events: 2564 mean_circ: 0.930538
Ran for 120050 frames Cell Events: 2578 mean_circ: 0.930567
Ran for 120550 frames Cell Events: 2590 mean_circ: 0.930567
Ran for 121050 frames Cell Events: 2599 mean_circ: 0.930584
Ran for 121550 frames Cell Events: 2609 mean_circ: 0.930557
Ran for 122550 frames Cell Events: 2624 mean_circ: 0.930592
Ran for 123050 frames Cell Events: 2637 mean_circ: 0.930623
Ran for 123550 frames Cell Events: 2647 mean_circ: 0.930549
Ran for 124050 frames Cell Events: 2665 mean_circ: 0.930598
Ran for 124550 frames Cell Events: 2676 mean_circ: 0.930644
Ran for 125050 frames Cell Events: 2689 mean_circ: 0.930605
Ran for 125550 frames Cell Events: 2694 mean_circ: 0.930632
Ran for 127050 frames Cell Events: 2712 mean_circ: 0.930714
Ran for 127550 frames Cell Events: 2726 mean_circ: 0.930805
Ran for 128050 frames Cell Events: 2741 mean_circ: 0.930824
Ran for 128550 frames Cell Events: 2750 mean_circ: 0.930917
Ran for 129050 frames Cell Events: 2760 mean_circ: 0.93093
Ran for 129550 frames Cell Events: 2775 mean_circ: 0.930877
Ran for 130050 frames Cell Events: 2782 mean_circ: 0.930888
Ran for 130550 frames Cell Events: 2792 mean_circ: 0.930882
Ran for 131550 frames Cell Events: 2815 mean_circ: 0.930779
Ran for 132550 frames Cell Events: 2830 mean_circ: 0.930742
Ran for 134050 frames Cell Events: 2866 mean_circ: 0.93081
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Ran for 136050 frames Cell Events: 2901 mean_circ: 0.930872
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Ran for 141550 frames Cell Events: 3024 mean_circ: 0.930685
Ran for 142050 frames Cell Events: 3031 mean_circ: 0.930694
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Ran for 147550 frames Cell Events: 3160 mean_circ: 0.930386
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Ran for 152050 frames Cell Events: 3254 mean_circ: 0.930448
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Ran for 153050 frames Cell Events: 3284 mean_circ: 0.930362
Ran for 153550 frames Cell Events: 3298 mean_circ: 0.930215
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Ran for 157050 frames Cell Events: 3394 mean_circ: 0.930326
Ran for 157550 frames Cell Events: 3407 mean_circ: 0.930335
Ran for 158050 frames Cell Events: 3417 mean_circ: 0.930354
Ran for 158550 frames Cell Events: 3431 mean_circ: 0.930382
Ran for 159050 frames Cell Events: 3438 mean_circ: 0.930377
Ran for 159550 frames Cell Events: 3448 mean_circ: 0.930257
Ran for 160050 frames Cell Events: 3455 mean_circ: 0.930279
Ran for 160550 frames Cell Events: 3471 mean_circ: 0.930252
Ran for 161050 frames Cell Events: 3477 mean_circ: 0.930245
Ran for 161550 frames Cell Events: 3488 mean_circ: 0.930221
Ran for 163050 frames Cell Events: 3527 mean_circ: 0.93012
Ran for 164050 frames Cell Events: 3554 mean_circ: 0.930078
Ran for 164550 frames Cell Events: 3566 mean_circ: 0.930099
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Ran for 166050 frames Cell Events: 3602 mean_circ: 0.930235
Ran for 166550 frames Cell Events: 3619 mean_circ: 0.930261
Ran for 167050 frames Cell Events: 3626 mean_circ: 0.930266
Ran for 167550 frames Cell Events: 3634 mean_circ: 0.93028
Ran for 168050 frames Cell Events: 3644 mean_circ: 0.930237
Ran for 168550 frames Cell Events: 3663 mean_circ: 0.930314
Ran for 169050 frames Cell Events: 3678 mean_circ: 0.930363
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Ran for 170050 frames Cell Events: 3704 mean_circ: 0.930299
Ran for 170550 frames Cell Events: 3715 mean_circ: 0.930332
Ran for 171050 frames Cell Events: 3733 mean_circ: 0.930216
Ran for 171550 frames Cell Events: 3744 mean_circ: 0.930155
Ran for 172050 frames Cell Events: 3754 mean_circ: 0.930131
Ran for 172550 frames Cell Events: 3769 mean_circ: 0.930121
Ran for 173050 frames Cell Events: 3785 mean_circ: 0.930171
Ran for 173550 frames Cell Events: 3794 mean_circ: 0.930213
Ran for 174050 frames Cell Events: 3799 mean_circ: 0.930248
Ran for 174550 frames Cell Events: 3807 mean_circ: 0.930253
Ran for 175050 frames Cell Events: 3819 mean_circ: 0.930251
Ran for 175550 frames Cell Events: 3830 mean_circ: 0.930212
Ran for 176050 frames Cell Events: 3840 mean_circ: 0.93018
Ran for 177050 frames Cell Events: 3864 mean_circ: 0.930166
Ran for 178550 frames Cell Events: 3894 mean_circ: 0.930196
Ran for 179050 frames Cell Events: 3901 mean_circ: 0.930232
Ran for 179550 frames Cell Events: 3916 mean_circ: 0.930285
Ran for 180050 frames Cell Events: 3935 mean_circ: 0.930287
Ran for 180550 frames Cell Events: 3944 mean_circ: 0.930233
Ran for 181050 frames Cell Events: 3957 mean_circ: 0.930237
Ran for 181550 frames Cell Events: 3965 mean_circ: 0.930261
Ran for 182050 frames Cell Events: 3975 mean_circ: 0.930223
Ran for 183050 frames Cell Events: 3993 mean_circ: 0.930282
Ran for 183550 frames Cell Events: 4004 mean_circ: 0.930331
Ran for 184050 frames Cell Events: 4015 mean_circ: 0.930282
Ran for 184550 frames Cell Events: 4025 mean_circ: 0.930336
Ran for 185050 frames Cell Events: 4036 mean_circ: 0.930314
Ran for 185550 frames Cell Events: 4048 mean_circ: 0.93034
Ran for 186050 frames Cell Events: 4059 mean_circ: 0.930393
Ran for 186550 frames Cell Events: 4073 mean_circ: 0.930473
Ran for 187050 frames Cell Events: 4086 mean_circ: 0.930488
Ran for 187550 frames Cell Events: 4101 mean_circ: 0.930509
Ran for 188050 frames Cell Events: 4111 mean_circ: 0.930476
Ran for 188550 frames Cell Events: 4120 mean_circ: 0.930454
Ran for 189050 frames Cell Events: 4131 mean_circ: 0.930497
Ran for 189550 frames Cell Events: 4140 mean_circ: 0.930399
Ran for 190050 frames Cell Events: 4146 mean_circ: 0.930402
Ran for 190550 frames Cell Events: 4152 mean_circ: 0.930415
Ran for 191050 frames Cell Events: 4163 mean_circ: 0.930453
Ran for 191550 frames Cell Events: 4181 mean_circ: 0.930416
Ran for 192050 frames Cell Events: 4191 mean_circ: 0.930418
Ran for 192550 frames Cell Events: 4196 mean_circ: 0.93041
Ran for 193050 frames Cell Events: 4211 mean_circ: 0.93044
Ran for 193550 frames Cell Events: 4219 mean_circ: 0.930375
Ran for 194050 frames Cell Events: 4231 mean_circ: 0.930375
Ran for 194550 frames Cell Events: 4238 mean_circ: 0.93042
Ran for 195050 frames Cell Events: 4251 mean_circ: 0.930358
Ran for 195550 frames Cell Events: 4260 mean_circ: 0.930404
Ran for 196050 frames Cell Events: 4273 mean_circ: 0.930469
Ran for 196550 frames Cell Events: 4285 mean_circ: 0.930508
Ran for 197050 frames Cell Events: 4297 mean_circ: 0.930555
Ran for 198050 frames Cell Events: 4304 mean_circ: 0.930556
Ran for 198550 frames Cell Events: 4310 mean_circ: 0.930531
Ran for 199550 frames Cell Events: 4333 mean_circ: 0.930402
Ran for 200550 frames Cell Events: 4357 mean_circ: 0.930344
Ran for 201550 frames Cell Events: 4377 mean_circ: 0.930341
Ran for 202050 frames Cell Events: 4386 mean_circ: 0.930317
Ran for 203550 frames Cell Events: 4431 mean_circ: 0.930334
Ran for 204050 frames Cell Events: 4438 mean_circ: 0.930341
Ran for 204550 frames Cell Events: 4451 mean_circ: 0.930239
Ran for 208050 frames Cell Events: 4546 mean_circ: 0.930234
Ran for 208550 frames Cell Events: 4558 mean_circ: 0.930247
Ran for 209550 frames Cell Events: 4579 mean_circ: 0.930182
Ran for 210050 frames Cell Events: 4591 mean_circ: 0.930164
Ran for 210550 frames Cell Events: 4603 mean_circ: 0.930131
Ran for 211050 frames Cell Events: 4612 mean_circ: 0.930105
Ran for 211550 frames Cell Events: 4628 mean_circ: 0.930111
Ran for 212050 frames Cell Events: 4635 mean_circ: 0.930039
Ran for 213050 frames Cell Events: 4670 mean_circ: 0.930003
Ran for 214550 frames Cell Events: 4707 mean_circ: 0.930082
Ran for 215050 frames Cell Events: 4722 mean_circ: 0.930143
Ran for 215550 frames Cell Events: 4733 mean_circ: 0.930197
Ran for 216550 frames Cell Events: 4756 mean_circ: 0.930221
Ran for 217050 frames Cell Events: 4764 mean_circ: 0.93025
Ran for 219050 frames Cell Events: 4811 mean_circ: 0.930128
Ran for 219550 frames Cell Events: 4827 mean_circ: 0.930178
Ran for 220550 frames Cell Events: 4853 mean_circ: 0.930159
Ran for 221050 frames Cell Events: 4866 mean_circ: 0.930189
Ran for 221550 frames Cell Events: 4875 mean_circ: 0.930181
Ran for 222050 frames Cell Events: 4895 mean_circ: 0.930172
Ran for 223050 frames Cell Events: 4915 mean_circ: 0.930031
Ran for 223550 frames Cell Events: 4925 mean_circ: 0.930063
Ran for 224050 frames Cell Events: 4933 mean_circ: 0.930051
Ran for 225050 frames Cell Events: 4959 mean_circ: 0.929955
Ran for 225550 frames Cell Events: 4978 mean_circ: 0.929911
Ran for 226050 frames Cell Events: 4989 mean_circ: 0.929898
Ran for 226550 frames Cell Events: 4998 mean_circ: 0.929884
Ran for 227050 frames Cell Events: 5017 mean_circ: 0.929899
Ran for 229550 frames Cell Events: 5078 mean_circ: 0.929947
Ran for 230050 frames Cell Events: 5085 mean_circ: 0.929919
Ran for 231050 frames Cell Events: 5107 mean_circ: 0.929955
Ran for 231550 frames Cell Events: 5119 mean_circ: 0.929967
Ran for 232050 frames Cell Events: 5135 mean_circ: 0.930027
Ran for 232550 frames Cell Events: 5143 mean_circ: 0.93004
Ran for 233550 frames Cell Events: 5175 mean_circ: 0.929986
Ran for 234050 frames Cell Events: 5191 mean_circ: 0.929989
Ran for 235050 frames Cell Events: 5214 mean_circ: 0.929947
Ran for 235550 frames Cell Events: 5231 mean_circ: 0.929964
Ran for 236050 frames Cell Events: 5250 mean_circ: 0.929973
Ran for 236550 frames Cell Events: 5265 mean_circ: 0.929967
Ran for 237050 frames Cell Events: 5274 mean_circ: 0.929997
Ran for 237550 frames Cell Events: 5284 mean_circ: 0.930009
Ran for 238050 frames Cell Events: 5292 mean_circ: 0.930032
Ran for 238550 frames Cell Events: 5308 mean_circ: 0.929946
Ran for 239550 frames Cell Events: 5330 mean_circ: 0.929906
Ran for 240050 frames Cell Events: 5342 mean_circ: 0.929915
Ran for 240550 frames Cell Events: 5350 mean_circ: 0.929883
Ran for 241050 frames Cell Events: 5360 mean_circ: 0.929928
Ran for 241550 frames Cell Events: 5370 mean_circ: 0.929886
Ran for 242050 frames Cell Events: 5387 mean_circ: 0.929916
Ran for 243050 frames Cell Events: 5406 mean_circ: 0.929885
Ran for 243550 frames Cell Events: 5427 mean_circ: 0.929806
Ran for 244050 frames Cell Events: 5433 mean_circ: 0.929825
Ran for 246050 frames Cell Events: 5486 mean_circ: 0.929873
Ran for 246550 frames Cell Events: 5499 mean_circ: 0.92989
Ran for 247550 frames Cell Events: 5518 mean_circ: 0.929879
Ran for 248050 frames Cell Events: 5524 mean_circ: 0.929873
Ran for 248550 frames Cell Events: 5533 mean_circ: 0.929898
Ran for 249050 frames Cell Events: 5545 mean_circ: 0.929901
Ran for 249550 frames Cell Events: 5551 mean_circ: 0.929903
Ran for 250050 frames Cell Events: 5564 mean_circ: 0.929912
Ran for 251050 frames Cell Events: 5584 mean_circ: 0.929931
Ran for 251550 frames Cell Events: 5605 mean_circ: 0.929963
Ran for 252050 frames Cell Events: 5624 mean_circ: 0.929957
Ran for 252550 frames Cell Events: 5636 mean_circ: 0.929933
Ran for 253050 frames Cell Events: 5638 mean_circ: 0.929915
Ran for 253550 frames Cell Events: 5647 mean_circ: 0.929928
Ran for 254050 frames Cell Events: 5654 mean_circ: 0.929917
Ran for 254550 frames Cell Events: 5667 mean_circ: 0.929926
Ran for 255050 frames Cell Events: 5677 mean_circ: 0.929915
Ran for 255550 frames Cell Events: 5691 mean_circ: 0.929922
Ran for 256050 frames Cell Events: 5704 mean_circ: 0.929923
Ran for 257050 frames Cell Events: 5743 mean_circ: 0.929961
Ran for 257550 frames Cell Events: 5751 mean_circ: 0.929951
Ran for 258050 frames Cell Events: 5765 mean_circ: 0.929945
Ran for 258550 frames Cell Events: 5773 mean_circ: 0.929944
Ran for 259050 frames Cell Events: 5788 mean_circ: 0.929965
Ran for 260050 frames Cell Events: 5811 mean_circ: 0.929987
Ran for 260550 frames Cell Events: 5824 mean_circ: 0.929954
Ran for 261550 frames Cell Events: 5862 mean_circ: 0.92987
Ran for 262050 frames Cell Events: 5885 mean_circ: 0.929919
Ran for 262550 frames Cell Events: 5898 mean_circ: 0.929866
Ran for 263050 frames Cell Events: 5913 mean_circ: 0.929835
Ran for 263550 frames Cell Events: 5927 mean_circ: 0.929878
Ran for 264550 frames Cell Events: 5957 mean_circ: 0.929819
Ran for 265550 frames Cell Events: 5983 mean_circ: 0.929786
Ran for 266050 frames Cell Events: 5996 mean_circ: 0.929749
Ran for 266550 frames Cell Events: 6006 mean_circ: 0.929757
Ran for 267050 frames Cell Events: 6025 mean_circ: 0.929702
Ran for 267550 frames Cell Events: 6037 mean_circ: 0.929711
Ran for 268050 frames Cell Events: 6060 mean_circ: 0.929661
Ran for 268550 frames Cell Events: 6078 mean_circ: 0.929635
Ran for 269550 frames Cell Events: 6103 mean_circ: 0.929573
Ran for 270050 frames Cell Events: 6117 mean_circ: 0.929549
Ran for 273550 frames Cell Events: 6236 mean_circ: 0.929221
Ran for 274050 frames Cell Events: 6251 mean_circ: 0.929189
Ran for 274550 frames Cell Events: 6262 mean_circ: 0.929183
Ran for 275050 frames Cell Events: 6277 mean_circ: 0.92914
Ran for 275550 frames Cell Events: 6288 mean_circ: 0.929148
Ran for 276050 frames Cell Events: 6301 mean_circ: 0.929158
Ran for 276550 frames Cell Events: 6323 mean_circ: 0.929159
Ran for 277050 frames Cell Events: 6332 mean_circ: 0.929179
Ran for 277550 frames Cell Events: 6345 mean_circ: 0.929195
Ran for 278050 frames Cell Events: 6354 mean_circ: 0.929232
Ran for 278550 frames Cell Events: 6369 mean_circ: 0.92921
Ran for 279050 frames Cell Events: 6381 mean_circ: 0.92919
Ran for 279550 frames Cell Events: 6397 mean_circ: 0.929182
Ran for 281050 frames Cell Events: 6428 mean_circ: 0.92913
Ran for 281550 frames Cell Events: 6441 mean_circ: 0.929152
Ran for 282550 frames Cell Events: 6473 mean_circ: 0.929159
Ran for 283050 frames Cell Events: 6486 mean_circ: 0.929163
Ran for 283550 frames Cell Events: 6503 mean_circ: 0.92919
Ran for 284550 frames Cell Events: 6529 mean_circ: 0.929142
Ran for 285050 frames Cell Events: 6543 mean_circ: 0.929183
Ran for 285550 frames Cell Events: 6552 mean_circ: 0.929149
Ran for 286050 frames Cell Events: 6562 mean_circ: 0.929134
Ran for 287050 frames Cell Events: 6594 mean_circ: 0.929144
Ran for 287550 frames Cell Events: 6606 mean_circ: 0.929188
Ran for 288050 frames Cell Events: 6624 mean_circ: 0.92921
Ran for 289050 frames Cell Events: 6650 mean_circ: 0.929193
Ran for 289550 frames Cell Events: 6666 mean_circ: 0.929186
Ran for 290050 frames Cell Events: 6678 mean_circ: 0.929177
Ran for 290550 frames Cell Events: 6692 mean_circ: 0.929162
Ran for 291050 frames Cell Events: 6703 mean_circ: 0.929133
Ran for 291550 frames Cell Events: 6713 mean_circ: 0.929122
Ran for 292050 frames Cell Events: 6727 mean_circ: 0.929117
Ran for 292550 frames Cell Events: 6742 mean_circ: 0.929131
Ran for 293050 frames Cell Events: 6759 mean_circ: 0.929151
Ran for 293550 frames Cell Events: 6770 mean_circ: 0.929135
Ran for 294050 frames Cell Events: 6775 mean_circ: 0.929143
Ran for 296550 frames Cell Events: 6858 mean_circ: 0.928969
Ran for 297050 frames Cell Events: 6869 mean_circ: 0.928936
Ran for 297550 frames Cell Events: 6883 mean_circ: 0.928928
Ran for 298050 frames Cell Events: 6893 mean_circ: 0.92895
Ran for 298550 frames Cell Events: 6913 mean_circ: 0.928948
Ran for 299050 frames Cell Events: 6932 mean_circ: 0.928975
Ran for 299550 frames Cell Events: 6946 mean_circ: 0.928922
Ran for 301050 frames Cell Events: 6995 mean_circ: 0.928891
Ran for 302050 frames Cell Events: 7015 mean_circ: 0.92892
Ran for 302550 frames Cell Events: 7021 mean_circ: 0.928934
Ran for 303050 frames Cell Events: 7034 mean_circ: 0.928871
Ran for 304050 frames Cell Events: 7060 mean_circ: 0.928774
Ran for 304550 frames Cell Events: 7074 mean_circ: 0.928805
Ran for 305050 frames Cell Events: 7082 mean_circ: 0.92874
Ran for 305550 frames Cell Events: 7092 mean_circ: 0.928759
Ran for 306050 frames Cell Events: 7112 mean_circ: 0.928762
Ran for 306550 frames Cell Events: 7121 mean_circ: 0.928755
Ran for 307050 frames Cell Events: 7132 mean_circ: 0.928722
Ran for 307550 frames Cell Events: 7141 mean_circ: 0.928689
Ran for 308050 frames Cell Events: 7153 mean_circ: 0.928628
Ran for 309050 frames Cell Events: 7174 mean_circ: 0.928612
Ran for 309550 frames Cell Events: 7190 mean_circ: 0.928585
Ran for 310050 frames Cell Events: 7204 mean_circ: 0.928598
Ran for 310550 frames Cell Events: 7216 mean_circ: 0.928579
Ran for 311050 frames Cell Events: 7223 mean_circ: 0.928603
Ran for 312050 frames Cell Events: 7251 mean_circ: 0.928609
Ran for 312550 frames Cell Events: 7263 mean_circ: 0.928611
Ran for 313050 frames Cell Events: 7274 mean_circ: 0.92863
Ran for 313550 frames Cell Events: 7285 mean_circ: 0.928623
Ran for 314050 frames Cell Events: 7295 mean_circ: 0.928613
Ran for 315550 frames Cell Events: 7342 mean_circ: 0.928631
Ran for 316050 frames Cell Events: 7357 mean_circ: 0.928614
Ran for 316550 frames Cell Events: 7374 mean_circ: 0.928562
Ran for 319050 frames Cell Events: 7443 mean_circ: 0.928511
Ran for 319550 frames Cell Events: 7456 mean_circ: 0.928526
Ran for 320050 frames Cell Events: 7463 mean_circ: 0.928504
Ran for 320550 frames Cell Events: 7474 mean_circ: 0.928519
Ran for 321050 frames Cell Events: 7489 mean_circ: 0.928508
Ran for 321550 frames Cell Events: 7500 mean_circ: 0.928494
Ran for 322050 frames Cell Events: 7509 mean_circ: 0.928536
Ran for 322550 frames Cell Events: 7520 mean_circ: 0.928543
Ran for 323050 frames Cell Events: 7539 mean_circ: 0.928507
Ran for 324050 frames Cell Events: 7581 mean_circ: 0.928529
Ran for 324550 frames Cell Events: 7598 mean_circ: 0.92848
Ran for 325050 frames Cell Events: 7610 mean_circ: 0.928541
Ran for 325550 frames Cell Events: 7618 mean_circ: 0.928556
Ran for 326050 frames Cell Events: 7633 mean_circ: 0.92858
Ran for 326550 frames Cell Events: 7643 mean_circ: 0.928579
Ran for 327050 frames Cell Events: 7661 mean_circ: 0.928569
Ran for 328550 frames Cell Events: 7708 mean_circ: 0.928521
Ran for 329050 frames Cell Events: 7721 mean_circ: 0.928482
Ran for 329550 frames Cell Events: 7729 mean_circ: 0.928459
Ran for 331550 frames Cell Events: 7783 mean_circ: 0.928472
Ran for 332550 frames Cell Events: 7813 mean_circ: 0.928398
Ran for 333050 frames Cell Events: 7828 mean_circ: 0.928416
Ran for 333550 frames Cell Events: 7843 mean_circ: 0.928393
Ran for 334550 frames Cell Events: 7869 mean_circ: 0.92835
Ran for 335050 frames Cell Events: 7877 mean_circ: 0.928338
Ran for 335550 frames Cell Events: 7892 mean_circ: 0.928406
Ran for 336050 frames Cell Events: 7905 mean_circ: 0.928423
Ran for 336550 frames Cell Events: 7920 mean_circ: 0.928428
Ran for 337050 frames Cell Events: 7931 mean_circ: 0.928445
Ran for 337550 frames Cell Events: 7941 mean_circ: 0.928446
Ran for 338050 frames Cell Events: 7955 mean_circ: 0.928426
Ran for 338550 frames Cell Events: 7961 mean_circ: 0.928444
Ran for 339050 frames Cell Events: 7974 mean_circ: 0.928419
End this measurment..
Stopping time: 5.41839e+008
****************************************
Measurement finished
Mean Circularitiy: 0.928446
Mean Area: 653.664
Mean FL-1 intensity: 4050.15
Mean FL-2 intensity: 5248.45
Mean FL-3 intensity: 0
frames processed: 337180
Total Time: 169908ms
Number of Runs (new bg img) 0
Frames collected: 339615
Skipped frames: 2435
Rescued Frames: 102672
Samples DAQ: 84904075
Samples written: 169807490
Samples per Channel: 84903745
FPS: 1998.82
Samples per second: 499705
Expected samples/s: 500000
Events: 7999
Events per second: 47.0785
jumped back (PMT): 7153
#Frames read, frequency
# 0 frames :444639
# 1 frames :213983
# 2 frames :6242
# 3 frames :2338
# 4 frames :1133
# 5 frames :452
# 6 frames :1351
# 7 frames :3126
# 8 frames :1076
# 9 frames :838
# 10 frames :1417
# 11 frames :624
# 12 frames :548
# 13 frames :386
# 14 frames :147
# 15 frames :158
# 16 frames :143
# 17 frames :117
# 18 frames :89
# 19 frames :62
# 20 frames :54
# 21 frames :39
# 22 frames :45
# 23 frames :39
# 24 frames :20
# 25 frames :14
# 26 frames :10
# 27 frames :10
# 28 frames :5
# 29 frames :7
# 30 frames :10
# 31 frames :6
# 32 frames :3
# 33 frames :2
# 34 frames :2
# 35 frames :2
# 36 frames :5
# 37 frames :1
# 38 frames :2
# 44 frames :2
# 56 frames :1
# 65 frames :1
# 72 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.2361
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0