Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-09_18.50.54
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "82890044daade12d3b61ee3de03f491c",
"name": "M1_20170521_1527_dsRNA_B4_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "16:51:23"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.5717
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 5.43865e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.928747
Ran for 550 frames Cell Events: 11 mean_circ: 0.952823
Ran for 1550 frames Cell Events: 38 mean_circ: 0.946338
Ran for 2050 frames Cell Events: 47 mean_circ: 0.949884
Ran for 2550 frames Cell Events: 58 mean_circ: 0.94698
Ran for 3050 frames Cell Events: 69 mean_circ: 0.948799
Ran for 3550 frames Cell Events: 75 mean_circ: 0.949244
Ran for 4050 frames Cell Events: 84 mean_circ: 0.946762
Ran for 4550 frames Cell Events: 96 mean_circ: 0.943412
Ran for 6050 frames Cell Events: 134 mean_circ: 0.947304
Ran for 6550 frames Cell Events: 148 mean_circ: 0.946945
Ran for 7050 frames Cell Events: 157 mean_circ: 0.946139
Ran for 7550 frames Cell Events: 162 mean_circ: 0.945945
Ran for 8550 frames Cell Events: 180 mean_circ: 0.946363
Ran for 9550 frames Cell Events: 214 mean_circ: 0.945393
Ran for 10050 frames Cell Events: 231 mean_circ: 0.946029
Ran for 10550 frames Cell Events: 239 mean_circ: 0.946207
Ran for 11050 frames Cell Events: 256 mean_circ: 0.946172
Ran for 11550 frames Cell Events: 273 mean_circ: 0.946497
Ran for 12050 frames Cell Events: 289 mean_circ: 0.946316
Ran for 12550 frames Cell Events: 297 mean_circ: 0.946299
Ran for 13050 frames Cell Events: 311 mean_circ: 0.946505
Ran for 14550 frames Cell Events: 355 mean_circ: 0.944945
Ran for 15050 frames Cell Events: 372 mean_circ: 0.944783
Ran for 15550 frames Cell Events: 388 mean_circ: 0.945319
Ran for 16050 frames Cell Events: 403 mean_circ: 0.945637
Ran for 17050 frames Cell Events: 426 mean_circ: 0.945605
Ran for 17550 frames Cell Events: 436 mean_circ: 0.945418
Ran for 18050 frames Cell Events: 447 mean_circ: 0.945234
Ran for 18550 frames Cell Events: 466 mean_circ: 0.945676
Ran for 19550 frames Cell Events: 501 mean_circ: 0.945231
Ran for 20050 frames Cell Events: 513 mean_circ: 0.945028
Ran for 20550 frames Cell Events: 528 mean_circ: 0.944947
Ran for 21550 frames Cell Events: 547 mean_circ: 0.945154
Ran for 22050 frames Cell Events: 554 mean_circ: 0.944655
Ran for 23050 frames Cell Events: 576 mean_circ: 0.944558
Ran for 23550 frames Cell Events: 593 mean_circ: 0.944695
Ran for 24050 frames Cell Events: 604 mean_circ: 0.944736
Ran for 25050 frames Cell Events: 631 mean_circ: 0.944527
Ran for 25550 frames Cell Events: 648 mean_circ: 0.944796
Ran for 26050 frames Cell Events: 653 mean_circ: 0.944931
Ran for 26550 frames Cell Events: 662 mean_circ: 0.944909
Ran for 27050 frames Cell Events: 670 mean_circ: 0.944788
Ran for 27550 frames Cell Events: 688 mean_circ: 0.9452
Ran for 29050 frames Cell Events: 721 mean_circ: 0.944946
Ran for 29550 frames Cell Events: 732 mean_circ: 0.944918
Ran for 30050 frames Cell Events: 744 mean_circ: 0.944768
Ran for 30550 frames Cell Events: 764 mean_circ: 0.944712
Ran for 31050 frames Cell Events: 795 mean_circ: 0.944473
Ran for 31550 frames Cell Events: 810 mean_circ: 0.944506
Ran for 32050 frames Cell Events: 830 mean_circ: 0.944328
Ran for 32550 frames Cell Events: 843 mean_circ: 0.944051
Ran for 33050 frames Cell Events: 858 mean_circ: 0.944261
Ran for 33550 frames Cell Events: 878 mean_circ: 0.94381
Ran for 36050 frames Cell Events: 960 mean_circ: 0.943517
Ran for 36550 frames Cell Events: 979 mean_circ: 0.943398
Ran for 37550 frames Cell Events: 1008 mean_circ: 0.943435
Ran for 38050 frames Cell Events: 1022 mean_circ: 0.943509
Ran for 38550 frames Cell Events: 1033 mean_circ: 0.943653
Ran for 40050 frames Cell Events: 1093 mean_circ: 0.943107
Ran for 40550 frames Cell Events: 1100 mean_circ: 0.943155
Ran for 41550 frames Cell Events: 1125 mean_circ: 0.943263
Ran for 42050 frames Cell Events: 1136 mean_circ: 0.943358
Ran for 42550 frames Cell Events: 1158 mean_circ: 0.943402
Ran for 43050 frames Cell Events: 1176 mean_circ: 0.943318
Ran for 44050 frames Cell Events: 1214 mean_circ: 0.943482
Ran for 44550 frames Cell Events: 1224 mean_circ: 0.94348
Ran for 45050 frames Cell Events: 1235 mean_circ: 0.943425
Ran for 45550 frames Cell Events: 1248 mean_circ: 0.943298
Ran for 46050 frames Cell Events: 1260 mean_circ: 0.943417
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Ran for 47050 frames Cell Events: 1290 mean_circ: 0.943503
Ran for 47550 frames Cell Events: 1299 mean_circ: 0.943497
Ran for 48050 frames Cell Events: 1305 mean_circ: 0.943422
Ran for 49050 frames Cell Events: 1334 mean_circ: 0.943729
Ran for 50550 frames Cell Events: 1380 mean_circ: 0.94347
Ran for 51050 frames Cell Events: 1392 mean_circ: 0.943547
Ran for 52550 frames Cell Events: 1478 mean_circ: 0.943395
Ran for 53050 frames Cell Events: 1490 mean_circ: 0.943341
Ran for 53550 frames Cell Events: 1509 mean_circ: 0.943476
Ran for 54050 frames Cell Events: 1524 mean_circ: 0.943463
Ran for 55050 frames Cell Events: 1561 mean_circ: 0.943619
Ran for 55550 frames Cell Events: 1576 mean_circ: 0.94379
Ran for 56050 frames Cell Events: 1581 mean_circ: 0.943787
Ran for 56550 frames Cell Events: 1600 mean_circ: 0.94384
Ran for 57050 frames Cell Events: 1612 mean_circ: 0.943972
Ran for 57550 frames Cell Events: 1622 mean_circ: 0.943899
Ran for 59550 frames Cell Events: 1675 mean_circ: 0.944097
Ran for 60050 frames Cell Events: 1685 mean_circ: 0.944156
Ran for 60550 frames Cell Events: 1702 mean_circ: 0.944082
Ran for 61550 frames Cell Events: 1743 mean_circ: 0.944201
Ran for 62050 frames Cell Events: 1764 mean_circ: 0.944312
Ran for 63550 frames Cell Events: 1821 mean_circ: 0.94387
Ran for 64550 frames Cell Events: 1845 mean_circ: 0.94371
Ran for 65050 frames Cell Events: 1861 mean_circ: 0.943807
Ran for 65550 frames Cell Events: 1877 mean_circ: 0.943823
Ran for 66050 frames Cell Events: 1892 mean_circ: 0.943906
Ran for 66550 frames Cell Events: 1906 mean_circ: 0.943707
Ran for 67050 frames Cell Events: 1929 mean_circ: 0.943731
Ran for 67550 frames Cell Events: 1945 mean_circ: 0.943761
Ran for 68050 frames Cell Events: 1954 mean_circ: 0.943738
Ran for 69050 frames Cell Events: 1997 mean_circ: 0.943765
Ran for 69550 frames Cell Events: 2021 mean_circ: 0.943625
Ran for 70050 frames Cell Events: 2040 mean_circ: 0.943514
Ran for 70550 frames Cell Events: 2054 mean_circ: 0.943418
Ran for 72050 frames Cell Events: 2117 mean_circ: 0.943574
Ran for 72550 frames Cell Events: 2143 mean_circ: 0.943628
Ran for 73050 frames Cell Events: 2160 mean_circ: 0.943671
Ran for 74550 frames Cell Events: 2211 mean_circ: 0.943693
Ran for 75050 frames Cell Events: 2221 mean_circ: 0.943644
Ran for 77550 frames Cell Events: 2341 mean_circ: 0.943572
Ran for 79050 frames Cell Events: 2408 mean_circ: 0.943551
Ran for 79550 frames Cell Events: 2420 mean_circ: 0.943538
Ran for 80550 frames Cell Events: 2458 mean_circ: 0.943448
Ran for 81550 frames Cell Events: 2489 mean_circ: 0.94341
Ran for 82050 frames Cell Events: 2505 mean_circ: 0.943368
Ran for 82550 frames Cell Events: 2519 mean_circ: 0.943399
Ran for 83550 frames Cell Events: 2548 mean_circ: 0.943314
Ran for 84550 frames Cell Events: 2597 mean_circ: 0.943335
Ran for 85050 frames Cell Events: 2627 mean_circ: 0.943281
Ran for 85550 frames Cell Events: 2650 mean_circ: 0.943281
Ran for 86050 frames Cell Events: 2664 mean_circ: 0.94327
Ran for 86550 frames Cell Events: 2681 mean_circ: 0.943177
Ran for 87050 frames Cell Events: 2697 mean_circ: 0.943243
Ran for 88050 frames Cell Events: 2719 mean_circ: 0.943324
Ran for 88550 frames Cell Events: 2728 mean_circ: 0.943328
Ran for 90050 frames Cell Events: 2759 mean_circ: 0.943355
Ran for 90550 frames Cell Events: 2780 mean_circ: 0.943397
Ran for 91050 frames Cell Events: 2805 mean_circ: 0.943389
Ran for 91550 frames Cell Events: 2817 mean_circ: 0.943469
Ran for 92050 frames Cell Events: 2835 mean_circ: 0.943568
Ran for 92550 frames Cell Events: 2846 mean_circ: 0.943524
Ran for 93050 frames Cell Events: 2858 mean_circ: 0.943591
Ran for 93550 frames Cell Events: 2885 mean_circ: 0.943616
Ran for 94550 frames Cell Events: 2915 mean_circ: 0.943645
Ran for 95050 frames Cell Events: 2924 mean_circ: 0.943685
Ran for 95550 frames Cell Events: 2938 mean_circ: 0.94371
Ran for 96550 frames Cell Events: 2972 mean_circ: 0.943548
Ran for 97550 frames Cell Events: 2999 mean_circ: 0.94339
Ran for 98050 frames Cell Events: 3007 mean_circ: 0.943379
Ran for 98550 frames Cell Events: 3025 mean_circ: 0.94345
Ran for 99050 frames Cell Events: 3033 mean_circ: 0.943476
Ran for 99550 frames Cell Events: 3045 mean_circ: 0.943432
Ran for 100050 frames Cell Events: 3052 mean_circ: 0.943436
Ran for 100550 frames Cell Events: 3068 mean_circ: 0.943475
Ran for 101050 frames Cell Events: 3088 mean_circ: 0.943455
Ran for 101550 frames Cell Events: 3101 mean_circ: 0.943477
Ran for 102050 frames Cell Events: 3115 mean_circ: 0.943396
Ran for 103050 frames Cell Events: 3144 mean_circ: 0.943545
Ran for 103550 frames Cell Events: 3163 mean_circ: 0.943552
Ran for 105050 frames Cell Events: 3209 mean_circ: 0.943472
Ran for 106050 frames Cell Events: 3239 mean_circ: 0.943414
Ran for 106550 frames Cell Events: 3260 mean_circ: 0.943457
Ran for 107050 frames Cell Events: 3285 mean_circ: 0.94334
Ran for 107550 frames Cell Events: 3302 mean_circ: 0.943338
Ran for 109050 frames Cell Events: 3347 mean_circ: 0.943369
Ran for 109550 frames Cell Events: 3365 mean_circ: 0.943405
Ran for 110050 frames Cell Events: 3374 mean_circ: 0.943381
Ran for 110550 frames Cell Events: 3397 mean_circ: 0.943404
Ran for 111550 frames Cell Events: 3428 mean_circ: 0.943315
Ran for 112050 frames Cell Events: 3443 mean_circ: 0.943303
Ran for 112550 frames Cell Events: 3463 mean_circ: 0.943393
Ran for 113550 frames Cell Events: 3500 mean_circ: 0.943475
Ran for 114050 frames Cell Events: 3516 mean_circ: 0.943306
Ran for 114550 frames Cell Events: 3526 mean_circ: 0.943306
Ran for 115050 frames Cell Events: 3541 mean_circ: 0.943266
Ran for 115550 frames Cell Events: 3556 mean_circ: 0.943235
Ran for 117050 frames Cell Events: 3599 mean_circ: 0.9432
Ran for 118050 frames Cell Events: 3657 mean_circ: 0.943078
Ran for 118550 frames Cell Events: 3690 mean_circ: 0.942968
Ran for 119050 frames Cell Events: 3718 mean_circ: 0.94303
Ran for 119550 frames Cell Events: 3750 mean_circ: 0.942982
Ran for 122550 frames Cell Events: 3868 mean_circ: 0.943019
Ran for 123050 frames Cell Events: 3882 mean_circ: 0.943024
Ran for 123550 frames Cell Events: 3892 mean_circ: 0.942976
Ran for 124550 frames Cell Events: 3916 mean_circ: 0.94305
Ran for 125050 frames Cell Events: 3924 mean_circ: 0.943067
Ran for 125550 frames Cell Events: 3941 mean_circ: 0.943068
Ran for 126050 frames Cell Events: 3951 mean_circ: 0.943094
Ran for 126550 frames Cell Events: 3967 mean_circ: 0.943155
Ran for 128550 frames Cell Events: 4042 mean_circ: 0.943039
Ran for 129050 frames Cell Events: 4049 mean_circ: 0.943009
Ran for 129550 frames Cell Events: 4067 mean_circ: 0.942986
Ran for 131050 frames Cell Events: 4131 mean_circ: 0.942853
Ran for 131550 frames Cell Events: 4147 mean_circ: 0.942886
Ran for 132050 frames Cell Events: 4158 mean_circ: 0.942814
Ran for 132550 frames Cell Events: 4170 mean_circ: 0.94284
Ran for 133050 frames Cell Events: 4186 mean_circ: 0.942874
Ran for 133550 frames Cell Events: 4206 mean_circ: 0.942787
Ran for 134050 frames Cell Events: 4227 mean_circ: 0.942852
Ran for 134550 frames Cell Events: 4247 mean_circ: 0.942839
Ran for 136050 frames Cell Events: 4300 mean_circ: 0.942924
Ran for 136550 frames Cell Events: 4319 mean_circ: 0.942932
Ran for 137050 frames Cell Events: 4331 mean_circ: 0.942923
Ran for 138550 frames Cell Events: 4380 mean_circ: 0.942811
Ran for 139050 frames Cell Events: 4396 mean_circ: 0.942826
Ran for 140050 frames Cell Events: 4429 mean_circ: 0.942802
Ran for 141050 frames Cell Events: 4470 mean_circ: 0.942809
Ran for 141550 frames Cell Events: 4487 mean_circ: 0.942763
Ran for 142050 frames Cell Events: 4496 mean_circ: 0.942743
Ran for 142550 frames Cell Events: 4514 mean_circ: 0.942783
Ran for 143050 frames Cell Events: 4527 mean_circ: 0.942774
Ran for 143550 frames Cell Events: 4538 mean_circ: 0.942797
Ran for 144050 frames Cell Events: 4544 mean_circ: 0.942828
Ran for 145050 frames Cell Events: 4578 mean_circ: 0.942881
Ran for 145550 frames Cell Events: 4592 mean_circ: 0.942906
Ran for 146050 frames Cell Events: 4606 mean_circ: 0.942902
Ran for 146550 frames Cell Events: 4618 mean_circ: 0.942932
Ran for 147050 frames Cell Events: 4633 mean_circ: 0.942941
Ran for 147550 frames Cell Events: 4651 mean_circ: 0.942963
Ran for 148050 frames Cell Events: 4667 mean_circ: 0.942944
Ran for 148550 frames Cell Events: 4677 mean_circ: 0.942906
Ran for 149550 frames Cell Events: 4711 mean_circ: 0.942944
Ran for 151550 frames Cell Events: 4799 mean_circ: 0.942862
Ran for 154050 frames Cell Events: 4896 mean_circ: 0.942822
Ran for 154550 frames Cell Events: 4909 mean_circ: 0.942717
Ran for 156050 frames Cell Events: 4948 mean_circ: 0.942688
Ran for 156550 frames Cell Events: 4961 mean_circ: 0.942682
Ran for 157550 frames Cell Events: 4995 mean_circ: 0.94273
Ran for 158050 frames Cell Events: 5012 mean_circ: 0.942719
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Ran for 162050 frames Cell Events: 5142 mean_circ: 0.942772
Ran for 163050 frames Cell Events: 5187 mean_circ: 0.942821
Ran for 163550 frames Cell Events: 5199 mean_circ: 0.942879
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Ran for 167050 frames Cell Events: 5357 mean_circ: 0.942736
Ran for 168050 frames Cell Events: 5387 mean_circ: 0.942744
Ran for 168550 frames Cell Events: 5410 mean_circ: 0.942703
Ran for 169050 frames Cell Events: 5431 mean_circ: 0.942742
Ran for 170050 frames Cell Events: 5462 mean_circ: 0.942706
Ran for 170550 frames Cell Events: 5482 mean_circ: 0.942665
Ran for 171050 frames Cell Events: 5500 mean_circ: 0.942674
Ran for 172050 frames Cell Events: 5529 mean_circ: 0.942607
Ran for 173050 frames Cell Events: 5557 mean_circ: 0.942642
Ran for 174050 frames Cell Events: 5585 mean_circ: 0.942697
Ran for 174550 frames Cell Events: 5602 mean_circ: 0.942629
Ran for 175050 frames Cell Events: 5617 mean_circ: 0.942622
Ran for 176550 frames Cell Events: 5657 mean_circ: 0.942601
Ran for 177050 frames Cell Events: 5668 mean_circ: 0.942653
Ran for 180550 frames Cell Events: 5784 mean_circ: 0.942649
Ran for 181550 frames Cell Events: 5816 mean_circ: 0.94262
Ran for 182550 frames Cell Events: 5852 mean_circ: 0.942643
Ran for 183050 frames Cell Events: 5868 mean_circ: 0.942655
Ran for 183550 frames Cell Events: 5880 mean_circ: 0.942668
Ran for 184050 frames Cell Events: 5889 mean_circ: 0.942652
Ran for 184550 frames Cell Events: 5912 mean_circ: 0.942642
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Ran for 187050 frames Cell Events: 5995 mean_circ: 0.942686
Ran for 190050 frames Cell Events: 6095 mean_circ: 0.942466
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Ran for 192550 frames Cell Events: 6201 mean_circ: 0.942432
Ran for 193550 frames Cell Events: 6242 mean_circ: 0.942403
Ran for 194050 frames Cell Events: 6262 mean_circ: 0.94238
Ran for 194550 frames Cell Events: 6286 mean_circ: 0.942347
Ran for 195550 frames Cell Events: 6320 mean_circ: 0.942421
Ran for 196550 frames Cell Events: 6357 mean_circ: 0.942443
Ran for 197550 frames Cell Events: 6387 mean_circ: 0.942425
Ran for 198050 frames Cell Events: 6398 mean_circ: 0.942422
Ran for 198550 frames Cell Events: 6412 mean_circ: 0.942406
Ran for 199050 frames Cell Events: 6430 mean_circ: 0.942416
Ran for 199550 frames Cell Events: 6450 mean_circ: 0.942442
Ran for 200050 frames Cell Events: 6474 mean_circ: 0.942411
Ran for 201050 frames Cell Events: 6501 mean_circ: 0.942408
Ran for 202550 frames Cell Events: 6540 mean_circ: 0.942457
Ran for 204550 frames Cell Events: 6621 mean_circ: 0.942431
Ran for 206550 frames Cell Events: 6694 mean_circ: 0.942511
Ran for 207050 frames Cell Events: 6717 mean_circ: 0.942506
Ran for 207550 frames Cell Events: 6734 mean_circ: 0.942427
Ran for 208050 frames Cell Events: 6750 mean_circ: 0.942448
Ran for 208550 frames Cell Events: 6774 mean_circ: 0.942438
Ran for 209050 frames Cell Events: 6789 mean_circ: 0.94247
Ran for 209550 frames Cell Events: 6802 mean_circ: 0.942508
Ran for 210550 frames Cell Events: 6832 mean_circ: 0.942518
Ran for 212050 frames Cell Events: 6897 mean_circ: 0.94254
Ran for 212550 frames Cell Events: 6916 mean_circ: 0.942531
Ran for 213050 frames Cell Events: 6934 mean_circ: 0.942511
Ran for 213550 frames Cell Events: 6948 mean_circ: 0.942521
Ran for 214050 frames Cell Events: 6972 mean_circ: 0.942498
Ran for 215050 frames Cell Events: 6998 mean_circ: 0.942463
Ran for 217550 frames Cell Events: 7091 mean_circ: 0.942457
Ran for 218550 frames Cell Events: 7134 mean_circ: 0.942487
Ran for 219050 frames Cell Events: 7149 mean_circ: 0.942466
Ran for 220550 frames Cell Events: 7204 mean_circ: 0.942425
Ran for 221050 frames Cell Events: 7229 mean_circ: 0.942401
Ran for 221550 frames Cell Events: 7241 mean_circ: 0.942402
Ran for 222050 frames Cell Events: 7275 mean_circ: 0.942382
Ran for 222550 frames Cell Events: 7296 mean_circ: 0.942366
Ran for 223550 frames Cell Events: 7352 mean_circ: 0.942314
Ran for 224550 frames Cell Events: 7382 mean_circ: 0.942314
Ran for 225050 frames Cell Events: 7403 mean_circ: 0.942311
Ran for 225550 frames Cell Events: 7412 mean_circ: 0.94232
Ran for 227550 frames Cell Events: 7462 mean_circ: 0.942279
Ran for 229050 frames Cell Events: 7507 mean_circ: 0.942299
Ran for 229550 frames Cell Events: 7531 mean_circ: 0.942309
Ran for 230050 frames Cell Events: 7542 mean_circ: 0.942327
Ran for 231050 frames Cell Events: 7580 mean_circ: 0.942392
Ran for 231550 frames Cell Events: 7594 mean_circ: 0.942345
Ran for 232550 frames Cell Events: 7625 mean_circ: 0.942343
Ran for 233550 frames Cell Events: 7657 mean_circ: 0.942384
Ran for 234050 frames Cell Events: 7671 mean_circ: 0.942378
Ran for 234550 frames Cell Events: 7686 mean_circ: 0.942413
Ran for 235050 frames Cell Events: 7701 mean_circ: 0.942432
Ran for 235550 frames Cell Events: 7717 mean_circ: 0.942465
Ran for 236050 frames Cell Events: 7741 mean_circ: 0.942479
Ran for 236550 frames Cell Events: 7759 mean_circ: 0.942462
Ran for 238050 frames Cell Events: 7817 mean_circ: 0.942487
Ran for 239550 frames Cell Events: 7865 mean_circ: 0.942463
Ran for 240050 frames Cell Events: 7873 mean_circ: 0.942472
Ran for 243050 frames Cell Events: 7988 mean_circ: 0.942293
Ran for 244550 frames Cell Events: 8039 mean_circ: 0.942286
Ran for 246050 frames Cell Events: 8083 mean_circ: 0.94226
End this measurment..
Stopping time: 5.43988e+008
****************************************
Measurement finished
Mean Circularitiy: 0.942153
Mean Area: 589.787
Mean FL-1 intensity: 3142.37
Mean FL-2 intensity: 3822.74
Mean FL-3 intensity: 0
frames processed: 245266
Total Time: 123623ms
Number of Runs (new bg img) 0
Frames collected: 247135
Skipped frames: 16338
Rescued Frames: 713753
Samples DAQ: 61784168
Samples written: 123567246
Samples per Channel: 61783623
FPS: 1999.1
Samples per second: 499775
Expected samples/s: 500000
Events: 8120
Events per second: 65.6836
jumped back (PMT): 4104
#Frames read, frequency
# 0 frames :351301
# 1 frames :125731
# 2 frames :4309
# 3 frames :1682
# 4 frames :970
# 5 frames :581
# 6 frames :1594
# 7 frames :1645
# 8 frames :1339
# 9 frames :805
# 10 frames :618
# 11 frames :586
# 12 frames :459
# 13 frames :337
# 14 frames :323
# 15 frames :261
# 16 frames :216
# 17 frames :187
# 18 frames :124
# 19 frames :109
# 20 frames :94
# 21 frames :87
# 22 frames :75
# 23 frames :71
# 24 frames :52
# 25 frames :44
# 26 frames :34
# 27 frames :32
# 28 frames :32
# 29 frames :20
# 30 frames :12
# 31 frames :21
# 32 frames :22
# 33 frames :22
# 34 frames :14
# 35 frames :12
# 36 frames :8
# 37 frames :3
# 38 frames :4
# 39 frames :3
# 40 frames :7
# 41 frames :9
# 42 frames :3
# 43 frames :2
# 44 frames :2
# 45 frames :7
# 46 frames :4
# 48 frames :2
# 49 frames :1
# 53 frames :2
# 54 frames :1
# 55 frames :2
# 59 frames :1
# 61 frames :3
# 63 frames :1
# 70 frames :1
# 77 frames :1
# 79 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.5717
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0