Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-09_19.19.56
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "1e6b91ec79abb888e7ffe5a943b5c8cd",
"name": "M1_20170522_1345_dsRNA_D4_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "17:20:16"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8049 (max 8050) in '8049'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.9807
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 6.24156e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 5 mean_circ: 0.964672
Ran for 1050 frames Cell Events: 8 mean_circ: 0.960104
Ran for 1550 frames Cell Events: 18 mean_circ: 0.95053
Ran for 2050 frames Cell Events: 39 mean_circ: 0.944001
Ran for 2550 frames Cell Events: 45 mean_circ: 0.941573
Ran for 3050 frames Cell Events: 53 mean_circ: 0.943769
Ran for 3550 frames Cell Events: 60 mean_circ: 0.944582
Ran for 4550 frames Cell Events: 88 mean_circ: 0.941981
Ran for 5550 frames Cell Events: 122 mean_circ: 0.940521
Ran for 6050 frames Cell Events: 139 mean_circ: 0.941498
Ran for 6550 frames Cell Events: 157 mean_circ: 0.938688
Ran for 7550 frames Cell Events: 188 mean_circ: 0.937795
Ran for 8050 frames Cell Events: 198 mean_circ: 0.938953
Ran for 8550 frames Cell Events: 211 mean_circ: 0.939349
Ran for 9050 frames Cell Events: 221 mean_circ: 0.939966
Ran for 9550 frames Cell Events: 232 mean_circ: 0.940506
Ran for 10050 frames Cell Events: 240 mean_circ: 0.940683
Ran for 10550 frames Cell Events: 247 mean_circ: 0.941356
Ran for 11050 frames Cell Events: 258 mean_circ: 0.941905
Ran for 11550 frames Cell Events: 272 mean_circ: 0.942225
Ran for 12550 frames Cell Events: 299 mean_circ: 0.942026
Ran for 13050 frames Cell Events: 306 mean_circ: 0.942415
Ran for 13550 frames Cell Events: 315 mean_circ: 0.942365
Ran for 14050 frames Cell Events: 332 mean_circ: 0.942912
Ran for 14550 frames Cell Events: 338 mean_circ: 0.943321
Ran for 15550 frames Cell Events: 367 mean_circ: 0.943428
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Ran for 18050 frames Cell Events: 416 mean_circ: 0.94261
Ran for 18550 frames Cell Events: 422 mean_circ: 0.942876
Ran for 19050 frames Cell Events: 436 mean_circ: 0.943385
Ran for 19550 frames Cell Events: 445 mean_circ: 0.94316
Ran for 20050 frames Cell Events: 458 mean_circ: 0.94259
Ran for 20550 frames Cell Events: 478 mean_circ: 0.942686
Ran for 21050 frames Cell Events: 492 mean_circ: 0.942389
Ran for 21550 frames Cell Events: 512 mean_circ: 0.942825
Ran for 22550 frames Cell Events: 545 mean_circ: 0.942658
Ran for 23050 frames Cell Events: 558 mean_circ: 0.942801
Ran for 23550 frames Cell Events: 574 mean_circ: 0.942518
Ran for 24050 frames Cell Events: 592 mean_circ: 0.9427
Ran for 24550 frames Cell Events: 596 mean_circ: 0.94264
Ran for 25050 frames Cell Events: 600 mean_circ: 0.94262
Ran for 26550 frames Cell Events: 646 mean_circ: 0.942695
Ran for 27050 frames Cell Events: 660 mean_circ: 0.942833
Ran for 29050 frames Cell Events: 734 mean_circ: 0.943718
Ran for 29550 frames Cell Events: 747 mean_circ: 0.94375
Ran for 31050 frames Cell Events: 798 mean_circ: 0.94395
Ran for 31550 frames Cell Events: 815 mean_circ: 0.944159
Ran for 32050 frames Cell Events: 837 mean_circ: 0.944416
Ran for 32550 frames Cell Events: 855 mean_circ: 0.944776
Ran for 33050 frames Cell Events: 869 mean_circ: 0.94477
Ran for 34550 frames Cell Events: 910 mean_circ: 0.944522
Ran for 35050 frames Cell Events: 924 mean_circ: 0.944619
Ran for 35550 frames Cell Events: 933 mean_circ: 0.944596
Ran for 36050 frames Cell Events: 948 mean_circ: 0.944412
Ran for 36550 frames Cell Events: 967 mean_circ: 0.944297
Ran for 37050 frames Cell Events: 981 mean_circ: 0.943917
Ran for 37550 frames Cell Events: 996 mean_circ: 0.94403
Ran for 38050 frames Cell Events: 1014 mean_circ: 0.94414
Ran for 38550 frames Cell Events: 1032 mean_circ: 0.94405
Ran for 39050 frames Cell Events: 1049 mean_circ: 0.944152
Ran for 39550 frames Cell Events: 1063 mean_circ: 0.944322
Ran for 40050 frames Cell Events: 1077 mean_circ: 0.944207
Ran for 40550 frames Cell Events: 1092 mean_circ: 0.9444
Ran for 41550 frames Cell Events: 1118 mean_circ: 0.944463
Ran for 42050 frames Cell Events: 1129 mean_circ: 0.944138
Ran for 42550 frames Cell Events: 1139 mean_circ: 0.94419
Ran for 43550 frames Cell Events: 1170 mean_circ: 0.943831
Ran for 44550 frames Cell Events: 1201 mean_circ: 0.94393
Ran for 45050 frames Cell Events: 1209 mean_circ: 0.944041
Ran for 46050 frames Cell Events: 1231 mean_circ: 0.944232
Ran for 46550 frames Cell Events: 1241 mean_circ: 0.944326
Ran for 47050 frames Cell Events: 1253 mean_circ: 0.944511
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Ran for 48050 frames Cell Events: 1282 mean_circ: 0.944588
Ran for 49050 frames Cell Events: 1310 mean_circ: 0.944584
Ran for 50050 frames Cell Events: 1346 mean_circ: 0.944463
Ran for 51050 frames Cell Events: 1378 mean_circ: 0.944438
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Ran for 52050 frames Cell Events: 1415 mean_circ: 0.944486
Ran for 52550 frames Cell Events: 1433 mean_circ: 0.944463
Ran for 53050 frames Cell Events: 1445 mean_circ: 0.944437
Ran for 53550 frames Cell Events: 1452 mean_circ: 0.944467
Ran for 54050 frames Cell Events: 1466 mean_circ: 0.944539
Ran for 55050 frames Cell Events: 1488 mean_circ: 0.944662
Ran for 55550 frames Cell Events: 1503 mean_circ: 0.944611
Ran for 56050 frames Cell Events: 1514 mean_circ: 0.944658
Ran for 56550 frames Cell Events: 1525 mean_circ: 0.944703
Ran for 57550 frames Cell Events: 1546 mean_circ: 0.944879
Ran for 58550 frames Cell Events: 1573 mean_circ: 0.94475
Ran for 59050 frames Cell Events: 1594 mean_circ: 0.944909
Ran for 60050 frames Cell Events: 1626 mean_circ: 0.944926
Ran for 60550 frames Cell Events: 1640 mean_circ: 0.944815
Ran for 61050 frames Cell Events: 1663 mean_circ: 0.944748
Ran for 61550 frames Cell Events: 1683 mean_circ: 0.944651
Ran for 62050 frames Cell Events: 1696 mean_circ: 0.944699
Ran for 62550 frames Cell Events: 1712 mean_circ: 0.944699
Ran for 63050 frames Cell Events: 1728 mean_circ: 0.944936
Ran for 63550 frames Cell Events: 1742 mean_circ: 0.94489
Ran for 64050 frames Cell Events: 1766 mean_circ: 0.944895
Ran for 64550 frames Cell Events: 1780 mean_circ: 0.94465
Ran for 65050 frames Cell Events: 1790 mean_circ: 0.944618
Ran for 65550 frames Cell Events: 1800 mean_circ: 0.944645
Ran for 66050 frames Cell Events: 1810 mean_circ: 0.944722
Ran for 66550 frames Cell Events: 1823 mean_circ: 0.944718
Ran for 67050 frames Cell Events: 1838 mean_circ: 0.944679
Ran for 67550 frames Cell Events: 1855 mean_circ: 0.94475
Ran for 68050 frames Cell Events: 1873 mean_circ: 0.944715
Ran for 69050 frames Cell Events: 1901 mean_circ: 0.944821
Ran for 69550 frames Cell Events: 1905 mean_circ: 0.944802
Ran for 70050 frames Cell Events: 1917 mean_circ: 0.944608
Ran for 70550 frames Cell Events: 1933 mean_circ: 0.944602
Ran for 71050 frames Cell Events: 1946 mean_circ: 0.944693
Ran for 72550 frames Cell Events: 1994 mean_circ: 0.944716
Ran for 73050 frames Cell Events: 2010 mean_circ: 0.944792
Ran for 73550 frames Cell Events: 2021 mean_circ: 0.944786
Ran for 74050 frames Cell Events: 2041 mean_circ: 0.94455
Ran for 74550 frames Cell Events: 2050 mean_circ: 0.944537
Ran for 75050 frames Cell Events: 2065 mean_circ: 0.944489
Ran for 75550 frames Cell Events: 2080 mean_circ: 0.944554
Ran for 76050 frames Cell Events: 2095 mean_circ: 0.944561
Ran for 76550 frames Cell Events: 2111 mean_circ: 0.944529
Ran for 77050 frames Cell Events: 2129 mean_circ: 0.94458
Ran for 78050 frames Cell Events: 2138 mean_circ: 0.944611
Ran for 78550 frames Cell Events: 2155 mean_circ: 0.944704
Ran for 79050 frames Cell Events: 2164 mean_circ: 0.944668
Ran for 79550 frames Cell Events: 2173 mean_circ: 0.944669
Ran for 80050 frames Cell Events: 2188 mean_circ: 0.944654
Ran for 80550 frames Cell Events: 2207 mean_circ: 0.944731
Ran for 81050 frames Cell Events: 2223 mean_circ: 0.944766
Ran for 81550 frames Cell Events: 2241 mean_circ: 0.944603
Ran for 82550 frames Cell Events: 2279 mean_circ: 0.944713
Ran for 83050 frames Cell Events: 2296 mean_circ: 0.944763
Ran for 85050 frames Cell Events: 2352 mean_circ: 0.944902
Ran for 86050 frames Cell Events: 2380 mean_circ: 0.944875
Ran for 87050 frames Cell Events: 2411 mean_circ: 0.944846
Ran for 87550 frames Cell Events: 2425 mean_circ: 0.944892
Ran for 88050 frames Cell Events: 2437 mean_circ: 0.944856
Ran for 88550 frames Cell Events: 2447 mean_circ: 0.944878
Ran for 89050 frames Cell Events: 2463 mean_circ: 0.9449
Ran for 89550 frames Cell Events: 2476 mean_circ: 0.944968
Ran for 90550 frames Cell Events: 2500 mean_circ: 0.944983
Ran for 91550 frames Cell Events: 2550 mean_circ: 0.944944
Ran for 92050 frames Cell Events: 2565 mean_circ: 0.945013
Ran for 93050 frames Cell Events: 2601 mean_circ: 0.945019
Ran for 93550 frames Cell Events: 2615 mean_circ: 0.94495
Ran for 94050 frames Cell Events: 2636 mean_circ: 0.944903
Ran for 95050 frames Cell Events: 2674 mean_circ: 0.944814
Ran for 95550 frames Cell Events: 2685 mean_circ: 0.944833
Ran for 96050 frames Cell Events: 2693 mean_circ: 0.944902
Ran for 96550 frames Cell Events: 2707 mean_circ: 0.944855
Ran for 97050 frames Cell Events: 2732 mean_circ: 0.94472
Ran for 97550 frames Cell Events: 2741 mean_circ: 0.944779
Ran for 98050 frames Cell Events: 2754 mean_circ: 0.944816
Ran for 98550 frames Cell Events: 2767 mean_circ: 0.94486
Ran for 99050 frames Cell Events: 2779 mean_circ: 0.944876
Ran for 100050 frames Cell Events: 2811 mean_circ: 0.944903
Ran for 100550 frames Cell Events: 2826 mean_circ: 0.944966
Ran for 102050 frames Cell Events: 2874 mean_circ: 0.94494
Ran for 102550 frames Cell Events: 2888 mean_circ: 0.944876
Ran for 103050 frames Cell Events: 2912 mean_circ: 0.944892
Ran for 103550 frames Cell Events: 2922 mean_circ: 0.944883
Ran for 104550 frames Cell Events: 2940 mean_circ: 0.944897
Ran for 105050 frames Cell Events: 2954 mean_circ: 0.94484
Ran for 105550 frames Cell Events: 2976 mean_circ: 0.944763
Ran for 106050 frames Cell Events: 2996 mean_circ: 0.944694
Ran for 106550 frames Cell Events: 3003 mean_circ: 0.944723
Ran for 107050 frames Cell Events: 3019 mean_circ: 0.944628
Ran for 107550 frames Cell Events: 3040 mean_circ: 0.944669
Ran for 108050 frames Cell Events: 3053 mean_circ: 0.944641
Ran for 108550 frames Cell Events: 3060 mean_circ: 0.944693
Ran for 109050 frames Cell Events: 3072 mean_circ: 0.944664
Ran for 109550 frames Cell Events: 3087 mean_circ: 0.944718
Ran for 110050 frames Cell Events: 3105 mean_circ: 0.944774
Ran for 110550 frames Cell Events: 3116 mean_circ: 0.944706
Ran for 111050 frames Cell Events: 3124 mean_circ: 0.944642
Ran for 112050 frames Cell Events: 3152 mean_circ: 0.944731
Ran for 112550 frames Cell Events: 3165 mean_circ: 0.94472
Ran for 113050 frames Cell Events: 3178 mean_circ: 0.944713
Ran for 113550 frames Cell Events: 3186 mean_circ: 0.944775
Ran for 114050 frames Cell Events: 3197 mean_circ: 0.944853
Ran for 114550 frames Cell Events: 3210 mean_circ: 0.944898
Ran for 115050 frames Cell Events: 3218 mean_circ: 0.944947
Ran for 115550 frames Cell Events: 3240 mean_circ: 0.944914
Ran for 116050 frames Cell Events: 3252 mean_circ: 0.944967
Ran for 116550 frames Cell Events: 3280 mean_circ: 0.944973
Ran for 117550 frames Cell Events: 3305 mean_circ: 0.944947
Ran for 118050 frames Cell Events: 3330 mean_circ: 0.944901
Ran for 118550 frames Cell Events: 3344 mean_circ: 0.944879
Ran for 119050 frames Cell Events: 3359 mean_circ: 0.944829
Ran for 119550 frames Cell Events: 3377 mean_circ: 0.944843
Ran for 120050 frames Cell Events: 3394 mean_circ: 0.944859
Ran for 120550 frames Cell Events: 3410 mean_circ: 0.94486
Ran for 121050 frames Cell Events: 3428 mean_circ: 0.944802
Ran for 121550 frames Cell Events: 3443 mean_circ: 0.944803
Ran for 122050 frames Cell Events: 3454 mean_circ: 0.944829
Ran for 122550 frames Cell Events: 3478 mean_circ: 0.94472
Ran for 123050 frames Cell Events: 3497 mean_circ: 0.944671
Ran for 123550 frames Cell Events: 3508 mean_circ: 0.94468
Ran for 124050 frames Cell Events: 3520 mean_circ: 0.944657
Ran for 125550 frames Cell Events: 3562 mean_circ: 0.944424
Ran for 126550 frames Cell Events: 3592 mean_circ: 0.944408
Ran for 127550 frames Cell Events: 3639 mean_circ: 0.944434
Ran for 128050 frames Cell Events: 3659 mean_circ: 0.944397
Ran for 128550 frames Cell Events: 3691 mean_circ: 0.944458
Ran for 129050 frames Cell Events: 3706 mean_circ: 0.944531
Ran for 129550 frames Cell Events: 3718 mean_circ: 0.94454
Ran for 130050 frames Cell Events: 3741 mean_circ: 0.944509
Ran for 131050 frames Cell Events: 3768 mean_circ: 0.944593
Ran for 131550 frames Cell Events: 3788 mean_circ: 0.944572
Ran for 132550 frames Cell Events: 3809 mean_circ: 0.94461
Ran for 133050 frames Cell Events: 3822 mean_circ: 0.944623
Ran for 133550 frames Cell Events: 3842 mean_circ: 0.944596
Ran for 135050 frames Cell Events: 3895 mean_circ: 0.944682
Ran for 136050 frames Cell Events: 3926 mean_circ: 0.944658
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Ran for 138050 frames Cell Events: 3985 mean_circ: 0.94471
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Ran for 140050 frames Cell Events: 4048 mean_circ: 0.944638
Ran for 140550 frames Cell Events: 4068 mean_circ: 0.944542
Ran for 141550 frames Cell Events: 4118 mean_circ: 0.944397
Ran for 142550 frames Cell Events: 4146 mean_circ: 0.944306
Ran for 143050 frames Cell Events: 4164 mean_circ: 0.944305
Ran for 143550 frames Cell Events: 4181 mean_circ: 0.944336
Ran for 144050 frames Cell Events: 4197 mean_circ: 0.944325
Ran for 144550 frames Cell Events: 4213 mean_circ: 0.944313
Ran for 145050 frames Cell Events: 4231 mean_circ: 0.944315
Ran for 145550 frames Cell Events: 4249 mean_circ: 0.944355
Ran for 146050 frames Cell Events: 4260 mean_circ: 0.944329
Ran for 147050 frames Cell Events: 4296 mean_circ: 0.944402
Ran for 147550 frames Cell Events: 4311 mean_circ: 0.944411
Ran for 148050 frames Cell Events: 4319 mean_circ: 0.944395
Ran for 148550 frames Cell Events: 4339 mean_circ: 0.944384
Ran for 149550 frames Cell Events: 4370 mean_circ: 0.944423
Ran for 150050 frames Cell Events: 4380 mean_circ: 0.944446
Ran for 150550 frames Cell Events: 4399 mean_circ: 0.944453
Ran for 151050 frames Cell Events: 4413 mean_circ: 0.944458
Ran for 151550 frames Cell Events: 4436 mean_circ: 0.944545
Ran for 152550 frames Cell Events: 4464 mean_circ: 0.944565
Ran for 153550 frames Cell Events: 4486 mean_circ: 0.944582
Ran for 154050 frames Cell Events: 4499 mean_circ: 0.944613
Ran for 154550 frames Cell Events: 4517 mean_circ: 0.944644
Ran for 155050 frames Cell Events: 4538 mean_circ: 0.944686
Ran for 156550 frames Cell Events: 4591 mean_circ: 0.944616
Ran for 157050 frames Cell Events: 4612 mean_circ: 0.944632
Ran for 157550 frames Cell Events: 4631 mean_circ: 0.944556
Ran for 158550 frames Cell Events: 4671 mean_circ: 0.944538
Ran for 159050 frames Cell Events: 4691 mean_circ: 0.944556
Ran for 159550 frames Cell Events: 4720 mean_circ: 0.944539
Ran for 160050 frames Cell Events: 4736 mean_circ: 0.944498
Ran for 161550 frames Cell Events: 4792 mean_circ: 0.944332
Ran for 162050 frames Cell Events: 4818 mean_circ: 0.944348
Ran for 164050 frames Cell Events: 4874 mean_circ: 0.944317
Ran for 164550 frames Cell Events: 4886 mean_circ: 0.944334
Ran for 165050 frames Cell Events: 4897 mean_circ: 0.944332
Ran for 165550 frames Cell Events: 4908 mean_circ: 0.944339
Ran for 166550 frames Cell Events: 4951 mean_circ: 0.94445
Ran for 167550 frames Cell Events: 4986 mean_circ: 0.944429
Ran for 168050 frames Cell Events: 5014 mean_circ: 0.944429
Ran for 168550 frames Cell Events: 5034 mean_circ: 0.944329
Ran for 169550 frames Cell Events: 5081 mean_circ: 0.944305
Ran for 170050 frames Cell Events: 5088 mean_circ: 0.944281
Ran for 170550 frames Cell Events: 5107 mean_circ: 0.944307
Ran for 171550 frames Cell Events: 5150 mean_circ: 0.944358
Ran for 173050 frames Cell Events: 5199 mean_circ: 0.94447
Ran for 173550 frames Cell Events: 5213 mean_circ: 0.944494
Ran for 174050 frames Cell Events: 5239 mean_circ: 0.944555
Ran for 174550 frames Cell Events: 5256 mean_circ: 0.94455
Ran for 175050 frames Cell Events: 5275 mean_circ: 0.944556
Ran for 175550 frames Cell Events: 5288 mean_circ: 0.944555
Ran for 176050 frames Cell Events: 5302 mean_circ: 0.94457
Ran for 177550 frames Cell Events: 5324 mean_circ: 0.944554
Ran for 178050 frames Cell Events: 5336 mean_circ: 0.944532
Ran for 178550 frames Cell Events: 5356 mean_circ: 0.944528
Ran for 179050 frames Cell Events: 5368 mean_circ: 0.944549
Ran for 179550 frames Cell Events: 5390 mean_circ: 0.944481
Ran for 180050 frames Cell Events: 5403 mean_circ: 0.944488
Ran for 180550 frames Cell Events: 5424 mean_circ: 0.944511
Ran for 181050 frames Cell Events: 5438 mean_circ: 0.944537
Ran for 181550 frames Cell Events: 5459 mean_circ: 0.944492
Ran for 182550 frames Cell Events: 5499 mean_circ: 0.944519
Ran for 183050 frames Cell Events: 5521 mean_circ: 0.944543
Ran for 183550 frames Cell Events: 5530 mean_circ: 0.944541
Ran for 184550 frames Cell Events: 5558 mean_circ: 0.944564
Ran for 185050 frames Cell Events: 5570 mean_circ: 0.944574
Ran for 185550 frames Cell Events: 5590 mean_circ: 0.944616
Ran for 186050 frames Cell Events: 5603 mean_circ: 0.944634
Ran for 187050 frames Cell Events: 5622 mean_circ: 0.94467
Ran for 187550 frames Cell Events: 5638 mean_circ: 0.944654
Ran for 188050 frames Cell Events: 5653 mean_circ: 0.944673
Ran for 188550 frames Cell Events: 5682 mean_circ: 0.944678
Ran for 189050 frames Cell Events: 5692 mean_circ: 0.944701
Ran for 189550 frames Cell Events: 5705 mean_circ: 0.94468
Ran for 190050 frames Cell Events: 5718 mean_circ: 0.944634
Ran for 190550 frames Cell Events: 5734 mean_circ: 0.944616
Ran for 191050 frames Cell Events: 5743 mean_circ: 0.944579
Ran for 192050 frames Cell Events: 5769 mean_circ: 0.94459
Ran for 192550 frames Cell Events: 5790 mean_circ: 0.944551
Ran for 193050 frames Cell Events: 5804 mean_circ: 0.944508
Ran for 193550 frames Cell Events: 5819 mean_circ: 0.944475
Ran for 194050 frames Cell Events: 5830 mean_circ: 0.944384
Ran for 194550 frames Cell Events: 5844 mean_circ: 0.944417
Ran for 195550 frames Cell Events: 5882 mean_circ: 0.944423
Ran for 196550 frames Cell Events: 5918 mean_circ: 0.94445
Ran for 197050 frames Cell Events: 5929 mean_circ: 0.944475
Ran for 197550 frames Cell Events: 5941 mean_circ: 0.944485
Ran for 198050 frames Cell Events: 5961 mean_circ: 0.944478
Ran for 198550 frames Cell Events: 5979 mean_circ: 0.944524
Ran for 199050 frames Cell Events: 5994 mean_circ: 0.944514
Ran for 200050 frames Cell Events: 6037 mean_circ: 0.944455
Ran for 200550 frames Cell Events: 6057 mean_circ: 0.944436
Ran for 201050 frames Cell Events: 6080 mean_circ: 0.944427
Ran for 201550 frames Cell Events: 6095 mean_circ: 0.944436
Ran for 202050 frames Cell Events: 6102 mean_circ: 0.94445
Ran for 203550 frames Cell Events: 6149 mean_circ: 0.944456
Ran for 204050 frames Cell Events: 6161 mean_circ: 0.944445
Ran for 204550 frames Cell Events: 6173 mean_circ: 0.94445
Ran for 205050 frames Cell Events: 6189 mean_circ: 0.944483
Ran for 205550 frames Cell Events: 6207 mean_circ: 0.944474
Ran for 206050 frames Cell Events: 6217 mean_circ: 0.944485
Ran for 206550 frames Cell Events: 6240 mean_circ: 0.944514
Ran for 207050 frames Cell Events: 6255 mean_circ: 0.944468
Ran for 207550 frames Cell Events: 6270 mean_circ: 0.944447
Ran for 208550 frames Cell Events: 6290 mean_circ: 0.94447
Ran for 209050 frames Cell Events: 6303 mean_circ: 0.944499
Ran for 209550 frames Cell Events: 6320 mean_circ: 0.944529
Ran for 210050 frames Cell Events: 6333 mean_circ: 0.944542
Ran for 210550 frames Cell Events: 6351 mean_circ: 0.944499
Ran for 211550 frames Cell Events: 6387 mean_circ: 0.944459
Ran for 212050 frames Cell Events: 6399 mean_circ: 0.944477
Ran for 213550 frames Cell Events: 6446 mean_circ: 0.944498
Ran for 214050 frames Cell Events: 6458 mean_circ: 0.944493
Ran for 214550 frames Cell Events: 6468 mean_circ: 0.944496
Ran for 215050 frames Cell Events: 6484 mean_circ: 0.94447
Ran for 215550 frames Cell Events: 6493 mean_circ: 0.944423
Ran for 216050 frames Cell Events: 6504 mean_circ: 0.944376
Ran for 216550 frames Cell Events: 6518 mean_circ: 0.944375
Ran for 217050 frames Cell Events: 6533 mean_circ: 0.944361
Ran for 218050 frames Cell Events: 6563 mean_circ: 0.9444
Ran for 218550 frames Cell Events: 6584 mean_circ: 0.944457
Ran for 219050 frames Cell Events: 6594 mean_circ: 0.944439
Ran for 219550 frames Cell Events: 6615 mean_circ: 0.944425
Ran for 220050 frames Cell Events: 6634 mean_circ: 0.944385
Ran for 221050 frames Cell Events: 6671 mean_circ: 0.944423
Ran for 221550 frames Cell Events: 6686 mean_circ: 0.944407
Ran for 223050 frames Cell Events: 6733 mean_circ: 0.944365
Ran for 224550 frames Cell Events: 6790 mean_circ: 0.944305
Ran for 225050 frames Cell Events: 6807 mean_circ: 0.944248
Ran for 225550 frames Cell Events: 6827 mean_circ: 0.94425
Ran for 226050 frames Cell Events: 6842 mean_circ: 0.944214
Ran for 227550 frames Cell Events: 6900 mean_circ: 0.944268
Ran for 228050 frames Cell Events: 6911 mean_circ: 0.944276
Ran for 228550 frames Cell Events: 6922 mean_circ: 0.944298
Ran for 229050 frames Cell Events: 6939 mean_circ: 0.944301
Ran for 229550 frames Cell Events: 6961 mean_circ: 0.944294
Ran for 230050 frames Cell Events: 6977 mean_circ: 0.944338
Ran for 230550 frames Cell Events: 6988 mean_circ: 0.944321
Ran for 231050 frames Cell Events: 7012 mean_circ: 0.944313
Ran for 231550 frames Cell Events: 7017 mean_circ: 0.944313
Ran for 232050 frames Cell Events: 7030 mean_circ: 0.944304
Ran for 232550 frames Cell Events: 7048 mean_circ: 0.944307
Ran for 233050 frames Cell Events: 7070 mean_circ: 0.944319
Ran for 233550 frames Cell Events: 7096 mean_circ: 0.944337
Ran for 234050 frames Cell Events: 7115 mean_circ: 0.944357
Ran for 234550 frames Cell Events: 7133 mean_circ: 0.944313
Ran for 235550 frames Cell Events: 7180 mean_circ: 0.944267
Ran for 236050 frames Cell Events: 7190 mean_circ: 0.944278
Ran for 236550 frames Cell Events: 7207 mean_circ: 0.944275
Ran for 237050 frames Cell Events: 7221 mean_circ: 0.944274
Ran for 237550 frames Cell Events: 7247 mean_circ: 0.944296
Ran for 238550 frames Cell Events: 7271 mean_circ: 0.944251
Ran for 239550 frames Cell Events: 7297 mean_circ: 0.944255
Ran for 240050 frames Cell Events: 7310 mean_circ: 0.944254
Ran for 240550 frames Cell Events: 7320 mean_circ: 0.944273
Ran for 241550 frames Cell Events: 7355 mean_circ: 0.944298
Ran for 242050 frames Cell Events: 7373 mean_circ: 0.944322
Ran for 243050 frames Cell Events: 7406 mean_circ: 0.944321
Ran for 243550 frames Cell Events: 7421 mean_circ: 0.944345
Ran for 244550 frames Cell Events: 7460 mean_circ: 0.944334
Ran for 245050 frames Cell Events: 7477 mean_circ: 0.944347
Ran for 245550 frames Cell Events: 7493 mean_circ: 0.944364
Ran for 246050 frames Cell Events: 7512 mean_circ: 0.944385
Ran for 246550 frames Cell Events: 7525 mean_circ: 0.944364
Ran for 247050 frames Cell Events: 7534 mean_circ: 0.944381
Ran for 247550 frames Cell Events: 7547 mean_circ: 0.944391
Ran for 248050 frames Cell Events: 7559 mean_circ: 0.944378
Ran for 248550 frames Cell Events: 7571 mean_circ: 0.944363
Ran for 249050 frames Cell Events: 7582 mean_circ: 0.944354
Ran for 249550 frames Cell Events: 7594 mean_circ: 0.944354
Ran for 250050 frames Cell Events: 7604 mean_circ: 0.944361
Ran for 251050 frames Cell Events: 7640 mean_circ: 0.944353
Ran for 251550 frames Cell Events: 7651 mean_circ: 0.944372
Ran for 252050 frames Cell Events: 7666 mean_circ: 0.944397
Ran for 252550 frames Cell Events: 7685 mean_circ: 0.944401
Ran for 253550 frames Cell Events: 7727 mean_circ: 0.94437
Ran for 254550 frames Cell Events: 7766 mean_circ: 0.944364
Ran for 255050 frames Cell Events: 7774 mean_circ: 0.944387
Ran for 255550 frames Cell Events: 7799 mean_circ: 0.944355
Ran for 256550 frames Cell Events: 7836 mean_circ: 0.944323
Ran for 257550 frames Cell Events: 7874 mean_circ: 0.94434
Ran for 258050 frames Cell Events: 7897 mean_circ: 0.944328
Ran for 258550 frames Cell Events: 7912 mean_circ: 0.94434
Ran for 259050 frames Cell Events: 7933 mean_circ: 0.944384
Ran for 260550 frames Cell Events: 7994 mean_circ: 0.944446
Ran for 261050 frames Cell Events: 8016 mean_circ: 0.944445
Ran for 261550 frames Cell Events: 8028 mean_circ: 0.944469
End this measurment..
Stopping time: 6.24288e+008
****************************************
Measurement finished
Mean Circularitiy: 0.944432
Mean Area: 616.871
Mean FL-1 intensity: 3051.85
Mean FL-2 intensity: 4319.93
Mean FL-3 intensity: 0
frames processed: 261389
Total Time: 131273ms
Number of Runs (new bg img) 0
Frames collected: 262395
Skipped frames: 12775
Rescued Frames: 656849
Samples DAQ: 65598668
Samples written: 131197282
Samples per Channel: 65598641
FPS: 1998.85
Samples per second: 499712
Expected samples/s: 500000
Events: 8050
Events per second: 61.3226
jumped back (PMT): 5239
#Frames read, frequency
# 0 frames :353656
# 1 frames :153653
# 2 frames :5191
# 3 frames :1753
# 4 frames :847
# 5 frames :308
# 6 frames :2038
# 7 frames :2165
# 8 frames :1206
# 9 frames :527
# 10 frames :544
# 11 frames :1062
# 12 frames :491
# 13 frames :245
# 14 frames :225
# 15 frames :201
# 16 frames :149
# 17 frames :96
# 18 frames :77
# 19 frames :62
# 20 frames :42
# 21 frames :51
# 22 frames :43
# 23 frames :29
# 24 frames :26
# 25 frames :8
# 26 frames :11
# 27 frames :12
# 28 frames :8
# 29 frames :12
# 30 frames :8
# 31 frames :4
# 32 frames :4
# 33 frames :1
# 34 frames :2
# 35 frames :1
# 38 frames :3
# 39 frames :1
# 45 frames :1
# 46 frames :1
# 47 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.9807
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0