Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-09_19.25.25
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "15264fb1b3db78bd71676145f73fd9f3",
"name": "M1_20170522_1450_dsRNA_D7_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "17:25:50"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 26.3247
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 6.28078e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.948661
Ran for 550 frames Cell Events: 20 mean_circ: 0.958006
Ran for 1550 frames Cell Events: 72 mean_circ: 0.940623
Ran for 2050 frames Cell Events: 98 mean_circ: 0.931338
Ran for 3050 frames Cell Events: 163 mean_circ: 0.936189
Ran for 3550 frames Cell Events: 191 mean_circ: 0.93735
Ran for 4050 frames Cell Events: 215 mean_circ: 0.937724
Ran for 4550 frames Cell Events: 238 mean_circ: 0.936723
Ran for 5550 frames Cell Events: 273 mean_circ: 0.937624
Ran for 6050 frames Cell Events: 287 mean_circ: 0.937469
Ran for 7050 frames Cell Events: 309 mean_circ: 0.938214
Ran for 7550 frames Cell Events: 338 mean_circ: 0.938118
Ran for 8050 frames Cell Events: 357 mean_circ: 0.937327
Ran for 8550 frames Cell Events: 379 mean_circ: 0.936495
Ran for 9550 frames Cell Events: 426 mean_circ: 0.937196
Ran for 10050 frames Cell Events: 461 mean_circ: 0.93726
Ran for 12050 frames Cell Events: 574 mean_circ: 0.938108
Ran for 12550 frames Cell Events: 601 mean_circ: 0.937924
Ran for 13050 frames Cell Events: 626 mean_circ: 0.938012
Ran for 14050 frames Cell Events: 668 mean_circ: 0.938502
Ran for 15050 frames Cell Events: 705 mean_circ: 0.938604
Ran for 17550 frames Cell Events: 824 mean_circ: 0.939395
Ran for 18050 frames Cell Events: 843 mean_circ: 0.939066
Ran for 18550 frames Cell Events: 861 mean_circ: 0.939037
Ran for 19050 frames Cell Events: 890 mean_circ: 0.93936
Ran for 20050 frames Cell Events: 927 mean_circ: 0.939096
Ran for 20550 frames Cell Events: 962 mean_circ: 0.939055
Ran for 21550 frames Cell Events: 1005 mean_circ: 0.939134
Ran for 22050 frames Cell Events: 1030 mean_circ: 0.93909
Ran for 23050 frames Cell Events: 1092 mean_circ: 0.938739
Ran for 23550 frames Cell Events: 1120 mean_circ: 0.938681
Ran for 25050 frames Cell Events: 1167 mean_circ: 0.938406
Ran for 25550 frames Cell Events: 1186 mean_circ: 0.938395
Ran for 26050 frames Cell Events: 1210 mean_circ: 0.938663
Ran for 26550 frames Cell Events: 1238 mean_circ: 0.938732
Ran for 27050 frames Cell Events: 1259 mean_circ: 0.938955
Ran for 27550 frames Cell Events: 1283 mean_circ: 0.939085
Ran for 28550 frames Cell Events: 1322 mean_circ: 0.939041
Ran for 29550 frames Cell Events: 1376 mean_circ: 0.938957
Ran for 30050 frames Cell Events: 1398 mean_circ: 0.93886
Ran for 30550 frames Cell Events: 1412 mean_circ: 0.938704
Ran for 31050 frames Cell Events: 1433 mean_circ: 0.938658
Ran for 32050 frames Cell Events: 1492 mean_circ: 0.938797
Ran for 32550 frames Cell Events: 1504 mean_circ: 0.938712
Ran for 34550 frames Cell Events: 1602 mean_circ: 0.937823
Ran for 35050 frames Cell Events: 1623 mean_circ: 0.938015
Ran for 36050 frames Cell Events: 1664 mean_circ: 0.938289
Ran for 37050 frames Cell Events: 1699 mean_circ: 0.938353
Ran for 37550 frames Cell Events: 1722 mean_circ: 0.938387
Ran for 38550 frames Cell Events: 1766 mean_circ: 0.938306
Ran for 39050 frames Cell Events: 1789 mean_circ: 0.938285
Ran for 40550 frames Cell Events: 1864 mean_circ: 0.938198
Ran for 41550 frames Cell Events: 1900 mean_circ: 0.938243
Ran for 42050 frames Cell Events: 1923 mean_circ: 0.93831
Ran for 42550 frames Cell Events: 1936 mean_circ: 0.938407
Ran for 43050 frames Cell Events: 1963 mean_circ: 0.938342
Ran for 43550 frames Cell Events: 1998 mean_circ: 0.938056
Ran for 44050 frames Cell Events: 2030 mean_circ: 0.938096
Ran for 46050 frames Cell Events: 2120 mean_circ: 0.938281
Ran for 46550 frames Cell Events: 2145 mean_circ: 0.938255
Ran for 47050 frames Cell Events: 2169 mean_circ: 0.938378
Ran for 47550 frames Cell Events: 2185 mean_circ: 0.938221
Ran for 48050 frames Cell Events: 2214 mean_circ: 0.93835
Ran for 48550 frames Cell Events: 2237 mean_circ: 0.938179
Ran for 49050 frames Cell Events: 2260 mean_circ: 0.938224
Ran for 49550 frames Cell Events: 2276 mean_circ: 0.938275
Ran for 50050 frames Cell Events: 2294 mean_circ: 0.938318
Ran for 51550 frames Cell Events: 2350 mean_circ: 0.937974
Ran for 52050 frames Cell Events: 2371 mean_circ: 0.938028
Ran for 53550 frames Cell Events: 2442 mean_circ: 0.938032
Ran for 54050 frames Cell Events: 2459 mean_circ: 0.938075
Ran for 55050 frames Cell Events: 2476 mean_circ: 0.938123
Ran for 56050 frames Cell Events: 2536 mean_circ: 0.937997
Ran for 57550 frames Cell Events: 2606 mean_circ: 0.938052
Ran for 58050 frames Cell Events: 2629 mean_circ: 0.938189
Ran for 58550 frames Cell Events: 2652 mean_circ: 0.938274
Ran for 59050 frames Cell Events: 2676 mean_circ: 0.938326
Ran for 60550 frames Cell Events: 2741 mean_circ: 0.938365
Ran for 62050 frames Cell Events: 2824 mean_circ: 0.938138
Ran for 62550 frames Cell Events: 2855 mean_circ: 0.938092
Ran for 63050 frames Cell Events: 2871 mean_circ: 0.938057
Ran for 64050 frames Cell Events: 2908 mean_circ: 0.938093
Ran for 64550 frames Cell Events: 2926 mean_circ: 0.938051
Ran for 65050 frames Cell Events: 2950 mean_circ: 0.938089
Ran for 65550 frames Cell Events: 2971 mean_circ: 0.938073
Ran for 66050 frames Cell Events: 2996 mean_circ: 0.937987
Ran for 67050 frames Cell Events: 3047 mean_circ: 0.938017
Ran for 67550 frames Cell Events: 3073 mean_circ: 0.937999
Ran for 69550 frames Cell Events: 3158 mean_circ: 0.937947
Ran for 70550 frames Cell Events: 3201 mean_circ: 0.938033
Ran for 71550 frames Cell Events: 3253 mean_circ: 0.937745
Ran for 72050 frames Cell Events: 3277 mean_circ: 0.937766
Ran for 72550 frames Cell Events: 3303 mean_circ: 0.937864
Ran for 73050 frames Cell Events: 3331 mean_circ: 0.937944
Ran for 73550 frames Cell Events: 3347 mean_circ: 0.937982
Ran for 74550 frames Cell Events: 3392 mean_circ: 0.937969
Ran for 75550 frames Cell Events: 3438 mean_circ: 0.93802
Ran for 77050 frames Cell Events: 3522 mean_circ: 0.93802
Ran for 77550 frames Cell Events: 3550 mean_circ: 0.938054
Ran for 78050 frames Cell Events: 3572 mean_circ: 0.938112
Ran for 78550 frames Cell Events: 3603 mean_circ: 0.938135
Ran for 79550 frames Cell Events: 3643 mean_circ: 0.938086
Ran for 81050 frames Cell Events: 3699 mean_circ: 0.937957
Ran for 81550 frames Cell Events: 3721 mean_circ: 0.938003
Ran for 82050 frames Cell Events: 3734 mean_circ: 0.937925
Ran for 83050 frames Cell Events: 3795 mean_circ: 0.937936
Ran for 83550 frames Cell Events: 3817 mean_circ: 0.937956
Ran for 85050 frames Cell Events: 3908 mean_circ: 0.938045
Ran for 85550 frames Cell Events: 3935 mean_circ: 0.938008
Ran for 86050 frames Cell Events: 3959 mean_circ: 0.938048
Ran for 86550 frames Cell Events: 3987 mean_circ: 0.938003
Ran for 87050 frames Cell Events: 4005 mean_circ: 0.938024
Ran for 87550 frames Cell Events: 4028 mean_circ: 0.938013
Ran for 89550 frames Cell Events: 4133 mean_circ: 0.938051
Ran for 90050 frames Cell Events: 4152 mean_circ: 0.938011
Ran for 91550 frames Cell Events: 4214 mean_circ: 0.937965
Ran for 92050 frames Cell Events: 4237 mean_circ: 0.937945
Ran for 92550 frames Cell Events: 4267 mean_circ: 0.937903
Ran for 93050 frames Cell Events: 4291 mean_circ: 0.937859
Ran for 93550 frames Cell Events: 4314 mean_circ: 0.937827
Ran for 94050 frames Cell Events: 4339 mean_circ: 0.937854
Ran for 94550 frames Cell Events: 4363 mean_circ: 0.93782
Ran for 95050 frames Cell Events: 4389 mean_circ: 0.937748
Ran for 96050 frames Cell Events: 4417 mean_circ: 0.937772
Ran for 96550 frames Cell Events: 4440 mean_circ: 0.937745
Ran for 97050 frames Cell Events: 4459 mean_circ: 0.937733
Ran for 97550 frames Cell Events: 4490 mean_circ: 0.93773
Ran for 98050 frames Cell Events: 4519 mean_circ: 0.937694
Ran for 99050 frames Cell Events: 4571 mean_circ: 0.937772
Ran for 99550 frames Cell Events: 4601 mean_circ: 0.937738
Ran for 100050 frames Cell Events: 4621 mean_circ: 0.937772
Ran for 100550 frames Cell Events: 4639 mean_circ: 0.937693
Ran for 101050 frames Cell Events: 4667 mean_circ: 0.9377
Ran for 101550 frames Cell Events: 4696 mean_circ: 0.937679
Ran for 102550 frames Cell Events: 4714 mean_circ: 0.937695
Ran for 103050 frames Cell Events: 4737 mean_circ: 0.93773
Ran for 103550 frames Cell Events: 4770 mean_circ: 0.937643
Ran for 105050 frames Cell Events: 4831 mean_circ: 0.937646
Ran for 105550 frames Cell Events: 4849 mean_circ: 0.93762
Ran for 106550 frames Cell Events: 4895 mean_circ: 0.937657
Ran for 107050 frames Cell Events: 4920 mean_circ: 0.93766
Ran for 107550 frames Cell Events: 4951 mean_circ: 0.937683
Ran for 109050 frames Cell Events: 4998 mean_circ: 0.937601
Ran for 111050 frames Cell Events: 5126 mean_circ: 0.937499
Ran for 111550 frames Cell Events: 5148 mean_circ: 0.937557
Ran for 112550 frames Cell Events: 5200 mean_circ: 0.937491
Ran for 113550 frames Cell Events: 5244 mean_circ: 0.937484
Ran for 114050 frames Cell Events: 5265 mean_circ: 0.937508
Ran for 114550 frames Cell Events: 5288 mean_circ: 0.93756
Ran for 115050 frames Cell Events: 5313 mean_circ: 0.937593
Ran for 117050 frames Cell Events: 5420 mean_circ: 0.937554
Ran for 118050 frames Cell Events: 5486 mean_circ: 0.937547
Ran for 119050 frames Cell Events: 5538 mean_circ: 0.937483
Ran for 119550 frames Cell Events: 5554 mean_circ: 0.937397
Ran for 120050 frames Cell Events: 5580 mean_circ: 0.937423
Ran for 120550 frames Cell Events: 5598 mean_circ: 0.937404
Ran for 121050 frames Cell Events: 5629 mean_circ: 0.937442
Ran for 121550 frames Cell Events: 5654 mean_circ: 0.937411
Ran for 122050 frames Cell Events: 5680 mean_circ: 0.937454
Ran for 122550 frames Cell Events: 5701 mean_circ: 0.937456
Ran for 123050 frames Cell Events: 5716 mean_circ: 0.937427
Ran for 124550 frames Cell Events: 5796 mean_circ: 0.937469
Ran for 125050 frames Cell Events: 5817 mean_circ: 0.937471
Ran for 125550 frames Cell Events: 5841 mean_circ: 0.937417
Ran for 126050 frames Cell Events: 5863 mean_circ: 0.937443
Ran for 127050 frames Cell Events: 5915 mean_circ: 0.937472
Ran for 128550 frames Cell Events: 5992 mean_circ: 0.937383
Ran for 129050 frames Cell Events: 6020 mean_circ: 0.937396
Ran for 129550 frames Cell Events: 6045 mean_circ: 0.937385
Ran for 131050 frames Cell Events: 6119 mean_circ: 0.937363
Ran for 131550 frames Cell Events: 6140 mean_circ: 0.937363
Ran for 132050 frames Cell Events: 6161 mean_circ: 0.937337
Ran for 133050 frames Cell Events: 6218 mean_circ: 0.937318
Ran for 134050 frames Cell Events: 6268 mean_circ: 0.937257
Ran for 134550 frames Cell Events: 6293 mean_circ: 0.93723
Ran for 135550 frames Cell Events: 6334 mean_circ: 0.937272
Ran for 136050 frames Cell Events: 6359 mean_circ: 0.937268
Ran for 136550 frames Cell Events: 6393 mean_circ: 0.937287
Ran for 137050 frames Cell Events: 6423 mean_circ: 0.937235
Ran for 138550 frames Cell Events: 6497 mean_circ: 0.937222
Ran for 139550 frames Cell Events: 6536 mean_circ: 0.937181
Ran for 141050 frames Cell Events: 6614 mean_circ: 0.937212
Ran for 141550 frames Cell Events: 6648 mean_circ: 0.937212
Ran for 142050 frames Cell Events: 6680 mean_circ: 0.937188
Ran for 142550 frames Cell Events: 6705 mean_circ: 0.937166
Ran for 143050 frames Cell Events: 6726 mean_circ: 0.937117
Ran for 143550 frames Cell Events: 6742 mean_circ: 0.937133
Ran for 144050 frames Cell Events: 6777 mean_circ: 0.93703
Ran for 144550 frames Cell Events: 6800 mean_circ: 0.937038
Ran for 145050 frames Cell Events: 6819 mean_circ: 0.937067
Ran for 145550 frames Cell Events: 6839 mean_circ: 0.937073
Ran for 147550 frames Cell Events: 6924 mean_circ: 0.936945
Ran for 148550 frames Cell Events: 6987 mean_circ: 0.93695
Ran for 150550 frames Cell Events: 7084 mean_circ: 0.936902
Ran for 152050 frames Cell Events: 7173 mean_circ: 0.936886
Ran for 152550 frames Cell Events: 7202 mean_circ: 0.936879
Ran for 153050 frames Cell Events: 7233 mean_circ: 0.93689
Ran for 153550 frames Cell Events: 7264 mean_circ: 0.936856
Ran for 154050 frames Cell Events: 7282 mean_circ: 0.936865
Ran for 154550 frames Cell Events: 7309 mean_circ: 0.936934
Ran for 155050 frames Cell Events: 7335 mean_circ: 0.936894
Ran for 156050 frames Cell Events: 7375 mean_circ: 0.936812
Ran for 156550 frames Cell Events: 7396 mean_circ: 0.936757
Ran for 157050 frames Cell Events: 7417 mean_circ: 0.936767
Ran for 157550 frames Cell Events: 7443 mean_circ: 0.936765
Ran for 158050 frames Cell Events: 7461 mean_circ: 0.936792
Ran for 159050 frames Cell Events: 7512 mean_circ: 0.936766
Ran for 159550 frames Cell Events: 7543 mean_circ: 0.936781
Ran for 160550 frames Cell Events: 7590 mean_circ: 0.93674
Ran for 162050 frames Cell Events: 7690 mean_circ: 0.936734
Ran for 162550 frames Cell Events: 7726 mean_circ: 0.93668
Ran for 163050 frames Cell Events: 7742 mean_circ: 0.936681
Ran for 164550 frames Cell Events: 7845 mean_circ: 0.936686
Ran for 165050 frames Cell Events: 7866 mean_circ: 0.936672
Ran for 166050 frames Cell Events: 7912 mean_circ: 0.936643
Ran for 166550 frames Cell Events: 7932 mean_circ: 0.936642
Ran for 167050 frames Cell Events: 7951 mean_circ: 0.936627
Ran for 167550 frames Cell Events: 7972 mean_circ: 0.936645
Ran for 168550 frames Cell Events: 8016 mean_circ: 0.936641
Ran for 169550 frames Cell Events: 8070 mean_circ: 0.936592
Ran for 170550 frames Cell Events: 8119 mean_circ: 0.9366
Ran for 171050 frames Cell Events: 8143 mean_circ: 0.93663
Ran for 171550 frames Cell Events: 8175 mean_circ: 0.936652
Ran for 172550 frames Cell Events: 8238 mean_circ: 0.936622
Ran for 173050 frames Cell Events: 8261 mean_circ: 0.93665
Ran for 174050 frames Cell Events: 8311 mean_circ: 0.93664
Ran for 175550 frames Cell Events: 8370 mean_circ: 0.936637
Ran for 176050 frames Cell Events: 8390 mean_circ: 0.936655
Ran for 176550 frames Cell Events: 8420 mean_circ: 0.936614
Ran for 177050 frames Cell Events: 8433 mean_circ: 0.936628
Ran for 177550 frames Cell Events: 8460 mean_circ: 0.936656
Ran for 178050 frames Cell Events: 8474 mean_circ: 0.936641
Ran for 178550 frames Cell Events: 8492 mean_circ: 0.936629
Ran for 179050 frames Cell Events: 8518 mean_circ: 0.936608
Ran for 179550 frames Cell Events: 8535 mean_circ: 0.936619
Ran for 180550 frames Cell Events: 8587 mean_circ: 0.936492
Ran for 181050 frames Cell Events: 8608 mean_circ: 0.936493
Ran for 181550 frames Cell Events: 8632 mean_circ: 0.936485
Ran for 182050 frames Cell Events: 8650 mean_circ: 0.936488
Ran for 182550 frames Cell Events: 8684 mean_circ: 0.936489
Ran for 183550 frames Cell Events: 8732 mean_circ: 0.936431
Ran for 184550 frames Cell Events: 8778 mean_circ: 0.936426
Ran for 186050 frames Cell Events: 8848 mean_circ: 0.936382
Ran for 186550 frames Cell Events: 8875 mean_circ: 0.936384
Ran for 187050 frames Cell Events: 8894 mean_circ: 0.936414
Ran for 188050 frames Cell Events: 8930 mean_circ: 0.936375
Ran for 188550 frames Cell Events: 8955 mean_circ: 0.936281
Ran for 189050 frames Cell Events: 8974 mean_circ: 0.936235
Ran for 190550 frames Cell Events: 9066 mean_circ: 0.936249
Ran for 191050 frames Cell Events: 9090 mean_circ: 0.936242
Ran for 192050 frames Cell Events: 9147 mean_circ: 0.936252
Ran for 193050 frames Cell Events: 9191 mean_circ: 0.936268
Ran for 193550 frames Cell Events: 9222 mean_circ: 0.936262
Ran for 194050 frames Cell Events: 9255 mean_circ: 0.936257
Ran for 194550 frames Cell Events: 9294 mean_circ: 0.936206
Ran for 195050 frames Cell Events: 9316 mean_circ: 0.936188
Ran for 196550 frames Cell Events: 9356 mean_circ: 0.936199
Ran for 197050 frames Cell Events: 9373 mean_circ: 0.936224
Ran for 197550 frames Cell Events: 9402 mean_circ: 0.936223
Ran for 198550 frames Cell Events: 9501 mean_circ: 0.936233
Ran for 199050 frames Cell Events: 9533 mean_circ: 0.936275
Ran for 201550 frames Cell Events: 9685 mean_circ: 0.936264
Ran for 202050 frames Cell Events: 9706 mean_circ: 0.936259
Ran for 203050 frames Cell Events: 9764 mean_circ: 0.936237
Ran for 204550 frames Cell Events: 9834 mean_circ: 0.936198
Ran for 205550 frames Cell Events: 9885 mean_circ: 0.936197
Ran for 206050 frames Cell Events: 9909 mean_circ: 0.936187
Ran for 206550 frames Cell Events: 9940 mean_circ: 0.93619
Ran for 207050 frames Cell Events: 9967 mean_circ: 0.93619
Ran for 207550 frames Cell Events: 9991 mean_circ: 0.936184
End this measurment.
because stop condition (time/nr of cells) was met
Stopping time: 6.28182e+008
****************************************
Measurement finished
Mean Circularitiy: 0.936211
Mean Area: 594.081
Mean FL-1 intensity: 3112.47
Mean FL-2 intensity: 4871.94
Mean FL-3 intensity: 0
frames processed: 204246
Total Time: 103917ms
Number of Runs (new bg img) 0
Frames collected: 207698
Skipped frames: 32709
Rescued Frames: 1602011
Samples DAQ: 51925506
Samples written: 103848724
Samples per Channel: 51924362
FPS: 1998.69
Samples per second: 499671
Expected samples/s: 500000
Events: 10001
Events per second: 96.2402
jumped back (PMT): 19
#Frames read, frequency
# 0 frames :294158
# 1 frames :104793
# 2 frames :4354
# 3 frames :1159
# 4 frames :552
# 5 frames :194
# 6 frames :4575
# 7 frames :1384
# 8 frames :1562
# 9 frames :592
# 10 frames :332
# 11 frames :274
# 12 frames :251
# 13 frames :145
# 14 frames :312
# 15 frames :179
# 16 frames :108
# 17 frames :62
# 18 frames :42
# 19 frames :39
# 20 frames :64
# 21 frames :37
# 22 frames :26
# 23 frames :31
# 24 frames :19
# 25 frames :9
# 26 frames :13
# 27 frames :6
# 28 frames :13
# 29 frames :11
# 30 frames :10
# 31 frames :4
# 32 frames :2
# 33 frames :1
# 34 frames :5
# 35 frames :5
# 37 frames :1
# 38 frames :2
# 39 frames :1
# 40 frames :2
# 41 frames :1
# 42 frames :3
# 45 frames :1
# 49 frames :1
# 51 frames :1
# 52 frames :1
# 58 frames :1
# 71 frames :1
# 72 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 26.3247
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0