Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-09_19.33.38
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "0b13ff9afcf70196635763f46d72d00d",
"name": "M1_20170522_1624_dsRNA_D5_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "17:33:58"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8016 (max 8017) in '8016'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.6848
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 6.33692e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 10 mean_circ: 0.932976
Ran for 1050 frames Cell Events: 18 mean_circ: 0.937733
Ran for 1550 frames Cell Events: 30 mean_circ: 0.939997
Ran for 2050 frames Cell Events: 45 mean_circ: 0.930214
Ran for 2550 frames Cell Events: 65 mean_circ: 0.931806
Ran for 3050 frames Cell Events: 77 mean_circ: 0.936468
Ran for 3550 frames Cell Events: 84 mean_circ: 0.930614
Ran for 4050 frames Cell Events: 91 mean_circ: 0.929419
Ran for 4550 frames Cell Events: 99 mean_circ: 0.928875
Ran for 5050 frames Cell Events: 103 mean_circ: 0.925957
Ran for 5550 frames Cell Events: 122 mean_circ: 0.927418
Ran for 7050 frames Cell Events: 171 mean_circ: 0.924514
Ran for 9050 frames Cell Events: 225 mean_circ: 0.923542
Ran for 10050 frames Cell Events: 243 mean_circ: 0.925331
Ran for 10550 frames Cell Events: 261 mean_circ: 0.925228
Ran for 11050 frames Cell Events: 272 mean_circ: 0.924992
Ran for 11550 frames Cell Events: 280 mean_circ: 0.924079
Ran for 12050 frames Cell Events: 295 mean_circ: 0.924548
Ran for 13050 frames Cell Events: 320 mean_circ: 0.925226
Ran for 13550 frames Cell Events: 332 mean_circ: 0.9253
Ran for 14050 frames Cell Events: 343 mean_circ: 0.925781
Ran for 14550 frames Cell Events: 358 mean_circ: 0.926388
Ran for 15050 frames Cell Events: 367 mean_circ: 0.925502
Ran for 15550 frames Cell Events: 381 mean_circ: 0.925244
Ran for 16050 frames Cell Events: 394 mean_circ: 0.924828
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Ran for 20050 frames Cell Events: 488 mean_circ: 0.923972
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Ran for 22550 frames Cell Events: 535 mean_circ: 0.924469
Ran for 23050 frames Cell Events: 551 mean_circ: 0.924016
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Ran for 24550 frames Cell Events: 578 mean_circ: 0.922372
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Ran for 25550 frames Cell Events: 594 mean_circ: 0.923162
Ran for 26050 frames Cell Events: 604 mean_circ: 0.922802
Ran for 26550 frames Cell Events: 617 mean_circ: 0.922447
Ran for 27050 frames Cell Events: 637 mean_circ: 0.922416
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Ran for 28050 frames Cell Events: 659 mean_circ: 0.92145
Ran for 28550 frames Cell Events: 669 mean_circ: 0.921919
Ran for 29050 frames Cell Events: 680 mean_circ: 0.922008
Ran for 31050 frames Cell Events: 721 mean_circ: 0.922898
Ran for 31550 frames Cell Events: 737 mean_circ: 0.922752
Ran for 32550 frames Cell Events: 761 mean_circ: 0.922847
Ran for 33050 frames Cell Events: 776 mean_circ: 0.922616
Ran for 33550 frames Cell Events: 784 mean_circ: 0.922899
Ran for 34050 frames Cell Events: 794 mean_circ: 0.923049
Ran for 35050 frames Cell Events: 810 mean_circ: 0.923193
Ran for 35550 frames Cell Events: 819 mean_circ: 0.923113
Ran for 36050 frames Cell Events: 827 mean_circ: 0.923286
Ran for 36550 frames Cell Events: 842 mean_circ: 0.92349
Ran for 37050 frames Cell Events: 859 mean_circ: 0.923607
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Ran for 41050 frames Cell Events: 929 mean_circ: 0.922791
Ran for 42050 frames Cell Events: 951 mean_circ: 0.923086
Ran for 43550 frames Cell Events: 987 mean_circ: 0.923431
Ran for 44050 frames Cell Events: 1002 mean_circ: 0.923171
Ran for 45050 frames Cell Events: 1025 mean_circ: 0.923605
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Ran for 53050 frames Cell Events: 1196 mean_circ: 0.923375
Ran for 53550 frames Cell Events: 1204 mean_circ: 0.923245
Ran for 54050 frames Cell Events: 1212 mean_circ: 0.923084
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Ran for 55050 frames Cell Events: 1246 mean_circ: 0.922815
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Ran for 56050 frames Cell Events: 1276 mean_circ: 0.92291
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Ran for 57050 frames Cell Events: 1302 mean_circ: 0.922871
Ran for 57550 frames Cell Events: 1312 mean_circ: 0.922597
Ran for 58050 frames Cell Events: 1316 mean_circ: 0.922595
Ran for 58550 frames Cell Events: 1325 mean_circ: 0.922841
Ran for 59050 frames Cell Events: 1335 mean_circ: 0.922774
Ran for 59550 frames Cell Events: 1343 mean_circ: 0.922706
Ran for 60550 frames Cell Events: 1371 mean_circ: 0.922959
Ran for 61050 frames Cell Events: 1399 mean_circ: 0.923127
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Ran for 62050 frames Cell Events: 1420 mean_circ: 0.922867
Ran for 62550 frames Cell Events: 1433 mean_circ: 0.922908
Ran for 63050 frames Cell Events: 1452 mean_circ: 0.923069
Ran for 63550 frames Cell Events: 1468 mean_circ: 0.923134
Ran for 64050 frames Cell Events: 1483 mean_circ: 0.923139
Ran for 64550 frames Cell Events: 1486 mean_circ: 0.923244
Ran for 65050 frames Cell Events: 1501 mean_circ: 0.923452
Ran for 65550 frames Cell Events: 1510 mean_circ: 0.923462
Ran for 66050 frames Cell Events: 1529 mean_circ: 0.92355
Ran for 66550 frames Cell Events: 1545 mean_circ: 0.923396
Ran for 67050 frames Cell Events: 1553 mean_circ: 0.923313
Ran for 67550 frames Cell Events: 1562 mean_circ: 0.923391
Ran for 68050 frames Cell Events: 1572 mean_circ: 0.923351
Ran for 68550 frames Cell Events: 1582 mean_circ: 0.923407
Ran for 69050 frames Cell Events: 1596 mean_circ: 0.923214
Ran for 69550 frames Cell Events: 1612 mean_circ: 0.923147
Ran for 70550 frames Cell Events: 1638 mean_circ: 0.923224
Ran for 71550 frames Cell Events: 1664 mean_circ: 0.923148
Ran for 72050 frames Cell Events: 1678 mean_circ: 0.923255
Ran for 72550 frames Cell Events: 1692 mean_circ: 0.923291
Ran for 73050 frames Cell Events: 1707 mean_circ: 0.923306
Ran for 73550 frames Cell Events: 1711 mean_circ: 0.923381
Ran for 74050 frames Cell Events: 1722 mean_circ: 0.92343
Ran for 74550 frames Cell Events: 1729 mean_circ: 0.923545
Ran for 75050 frames Cell Events: 1737 mean_circ: 0.923532
Ran for 75550 frames Cell Events: 1744 mean_circ: 0.923536
Ran for 76050 frames Cell Events: 1752 mean_circ: 0.923445
Ran for 76550 frames Cell Events: 1765 mean_circ: 0.923497
Ran for 77050 frames Cell Events: 1780 mean_circ: 0.923602
Ran for 77550 frames Cell Events: 1807 mean_circ: 0.92362
Ran for 78550 frames Cell Events: 1830 mean_circ: 0.923583
Ran for 79050 frames Cell Events: 1846 mean_circ: 0.923375
Ran for 81050 frames Cell Events: 1887 mean_circ: 0.923438
Ran for 81550 frames Cell Events: 1893 mean_circ: 0.923412
Ran for 83050 frames Cell Events: 1925 mean_circ: 0.923481
Ran for 83550 frames Cell Events: 1940 mean_circ: 0.923485
Ran for 84550 frames Cell Events: 1956 mean_circ: 0.923651
Ran for 85050 frames Cell Events: 1961 mean_circ: 0.923618
Ran for 85550 frames Cell Events: 1967 mean_circ: 0.92369
Ran for 86050 frames Cell Events: 1980 mean_circ: 0.923755
Ran for 86550 frames Cell Events: 1998 mean_circ: 0.923863
Ran for 87050 frames Cell Events: 2010 mean_circ: 0.923909
Ran for 87550 frames Cell Events: 2027 mean_circ: 0.923741
Ran for 88050 frames Cell Events: 2041 mean_circ: 0.923796
Ran for 88550 frames Cell Events: 2052 mean_circ: 0.923785
Ran for 89050 frames Cell Events: 2059 mean_circ: 0.9238
Ran for 89550 frames Cell Events: 2070 mean_circ: 0.923725
Ran for 90050 frames Cell Events: 2082 mean_circ: 0.923573
Ran for 90550 frames Cell Events: 2085 mean_circ: 0.923557
Ran for 91050 frames Cell Events: 2096 mean_circ: 0.923571
Ran for 92050 frames Cell Events: 2120 mean_circ: 0.923692
Ran for 93550 frames Cell Events: 2161 mean_circ: 0.923388
Ran for 94550 frames Cell Events: 2185 mean_circ: 0.923489
Ran for 95050 frames Cell Events: 2196 mean_circ: 0.923495
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Ran for 96050 frames Cell Events: 2219 mean_circ: 0.923306
Ran for 96550 frames Cell Events: 2233 mean_circ: 0.923409
Ran for 97050 frames Cell Events: 2245 mean_circ: 0.923356
Ran for 97550 frames Cell Events: 2257 mean_circ: 0.923287
Ran for 98050 frames Cell Events: 2265 mean_circ: 0.923292
Ran for 98550 frames Cell Events: 2270 mean_circ: 0.923346
Ran for 99050 frames Cell Events: 2283 mean_circ: 0.92329
Ran for 99550 frames Cell Events: 2294 mean_circ: 0.923418
Ran for 100050 frames Cell Events: 2306 mean_circ: 0.92353
Ran for 101050 frames Cell Events: 2323 mean_circ: 0.92352
Ran for 101550 frames Cell Events: 2335 mean_circ: 0.923431
Ran for 102050 frames Cell Events: 2346 mean_circ: 0.923265
Ran for 102550 frames Cell Events: 2361 mean_circ: 0.923221
Ran for 103050 frames Cell Events: 2372 mean_circ: 0.923345
Ran for 104550 frames Cell Events: 2412 mean_circ: 0.923528
Ran for 105050 frames Cell Events: 2424 mean_circ: 0.923544
Ran for 105550 frames Cell Events: 2440 mean_circ: 0.923502
Ran for 106050 frames Cell Events: 2453 mean_circ: 0.923388
Ran for 106550 frames Cell Events: 2460 mean_circ: 0.923459
Ran for 107050 frames Cell Events: 2467 mean_circ: 0.923518
Ran for 107550 frames Cell Events: 2474 mean_circ: 0.923482
Ran for 108050 frames Cell Events: 2486 mean_circ: 0.923384
Ran for 108550 frames Cell Events: 2495 mean_circ: 0.923328
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Ran for 110050 frames Cell Events: 2534 mean_circ: 0.923393
Ran for 110550 frames Cell Events: 2543 mean_circ: 0.923377
Ran for 111050 frames Cell Events: 2558 mean_circ: 0.923446
Ran for 111550 frames Cell Events: 2569 mean_circ: 0.923458
Ran for 112050 frames Cell Events: 2573 mean_circ: 0.923468
Ran for 113050 frames Cell Events: 2605 mean_circ: 0.923464
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Ran for 115050 frames Cell Events: 2695 mean_circ: 0.923293
Ran for 115550 frames Cell Events: 2714 mean_circ: 0.923291
Ran for 116050 frames Cell Events: 2728 mean_circ: 0.923304
Ran for 117050 frames Cell Events: 2744 mean_circ: 0.923305
Ran for 118050 frames Cell Events: 2770 mean_circ: 0.923238
Ran for 118550 frames Cell Events: 2778 mean_circ: 0.923166
Ran for 119050 frames Cell Events: 2793 mean_circ: 0.923091
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Ran for 121050 frames Cell Events: 2858 mean_circ: 0.923116
Ran for 121550 frames Cell Events: 2869 mean_circ: 0.923154
Ran for 122050 frames Cell Events: 2878 mean_circ: 0.923168
Ran for 123050 frames Cell Events: 2894 mean_circ: 0.923284
Ran for 124050 frames Cell Events: 2915 mean_circ: 0.923348
Ran for 124550 frames Cell Events: 2932 mean_circ: 0.923428
Ran for 125550 frames Cell Events: 2952 mean_circ: 0.923314
Ran for 126050 frames Cell Events: 2965 mean_circ: 0.923365
Ran for 127050 frames Cell Events: 2985 mean_circ: 0.923457
Ran for 127550 frames Cell Events: 2994 mean_circ: 0.923495
Ran for 128050 frames Cell Events: 3004 mean_circ: 0.92353
Ran for 130050 frames Cell Events: 3072 mean_circ: 0.923252
Ran for 131050 frames Cell Events: 3095 mean_circ: 0.923184
Ran for 131550 frames Cell Events: 3116 mean_circ: 0.923083
Ran for 132050 frames Cell Events: 3123 mean_circ: 0.923062
Ran for 132550 frames Cell Events: 3134 mean_circ: 0.923094
Ran for 133550 frames Cell Events: 3155 mean_circ: 0.923237
Ran for 134050 frames Cell Events: 3167 mean_circ: 0.923311
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Ran for 142550 frames Cell Events: 3370 mean_circ: 0.923014
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Ran for 146550 frames Cell Events: 3465 mean_circ: 0.923
Ran for 147050 frames Cell Events: 3471 mean_circ: 0.922977
Ran for 147550 frames Cell Events: 3484 mean_circ: 0.922911
Ran for 148550 frames Cell Events: 3517 mean_circ: 0.922854
Ran for 149050 frames Cell Events: 3527 mean_circ: 0.922907
Ran for 149550 frames Cell Events: 3546 mean_circ: 0.922823
Ran for 150050 frames Cell Events: 3562 mean_circ: 0.922792
Ran for 150550 frames Cell Events: 3573 mean_circ: 0.922854
Ran for 151050 frames Cell Events: 3581 mean_circ: 0.922887
Ran for 151550 frames Cell Events: 3592 mean_circ: 0.922778
Ran for 152050 frames Cell Events: 3604 mean_circ: 0.922834
Ran for 153050 frames Cell Events: 3630 mean_circ: 0.922652
Ran for 154050 frames Cell Events: 3650 mean_circ: 0.922634
Ran for 154550 frames Cell Events: 3663 mean_circ: 0.922626
Ran for 155550 frames Cell Events: 3702 mean_circ: 0.922526
Ran for 156050 frames Cell Events: 3711 mean_circ: 0.922495
Ran for 157050 frames Cell Events: 3754 mean_circ: 0.922476
Ran for 158050 frames Cell Events: 3791 mean_circ: 0.922497
Ran for 158550 frames Cell Events: 3804 mean_circ: 0.922477
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Ran for 161050 frames Cell Events: 3850 mean_circ: 0.92257
Ran for 161550 frames Cell Events: 3860 mean_circ: 0.922491
Ran for 163050 frames Cell Events: 3904 mean_circ: 0.922525
Ran for 163550 frames Cell Events: 3913 mean_circ: 0.922533
Ran for 164050 frames Cell Events: 3925 mean_circ: 0.922477
Ran for 164550 frames Cell Events: 3944 mean_circ: 0.922523
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Ran for 165550 frames Cell Events: 3972 mean_circ: 0.922588
Ran for 166550 frames Cell Events: 3997 mean_circ: 0.922489
Ran for 167050 frames Cell Events: 4011 mean_circ: 0.922529
Ran for 167550 frames Cell Events: 4019 mean_circ: 0.922502
Ran for 168050 frames Cell Events: 4032 mean_circ: 0.92252
Ran for 168550 frames Cell Events: 4043 mean_circ: 0.922553
Ran for 169550 frames Cell Events: 4075 mean_circ: 0.922467
Ran for 170050 frames Cell Events: 4083 mean_circ: 0.922465
Ran for 171050 frames Cell Events: 4109 mean_circ: 0.922497
Ran for 171550 frames Cell Events: 4115 mean_circ: 0.922506
Ran for 172050 frames Cell Events: 4126 mean_circ: 0.922378
Ran for 172550 frames Cell Events: 4136 mean_circ: 0.922372
Ran for 173050 frames Cell Events: 4153 mean_circ: 0.92244
Ran for 173550 frames Cell Events: 4166 mean_circ: 0.922426
Ran for 174050 frames Cell Events: 4184 mean_circ: 0.922469
Ran for 175050 frames Cell Events: 4206 mean_circ: 0.92251
Ran for 176050 frames Cell Events: 4235 mean_circ: 0.922429
Ran for 176550 frames Cell Events: 4241 mean_circ: 0.922427
Ran for 177550 frames Cell Events: 4268 mean_circ: 0.922369
Ran for 178050 frames Cell Events: 4280 mean_circ: 0.9224
Ran for 179050 frames Cell Events: 4315 mean_circ: 0.922502
Ran for 179550 frames Cell Events: 4336 mean_circ: 0.922583
Ran for 180050 frames Cell Events: 4353 mean_circ: 0.922581
Ran for 180550 frames Cell Events: 4367 mean_circ: 0.922587
Ran for 181050 frames Cell Events: 4384 mean_circ: 0.922539
Ran for 181550 frames Cell Events: 4395 mean_circ: 0.922555
Ran for 182050 frames Cell Events: 4408 mean_circ: 0.922521
Ran for 182550 frames Cell Events: 4425 mean_circ: 0.922474
Ran for 183050 frames Cell Events: 4437 mean_circ: 0.922389
Ran for 183550 frames Cell Events: 4446 mean_circ: 0.92237
Ran for 184050 frames Cell Events: 4458 mean_circ: 0.922417
Ran for 184550 frames Cell Events: 4469 mean_circ: 0.92247
Ran for 185050 frames Cell Events: 4481 mean_circ: 0.922491
Ran for 186050 frames Cell Events: 4505 mean_circ: 0.922521
Ran for 186550 frames Cell Events: 4513 mean_circ: 0.9225
Ran for 187050 frames Cell Events: 4523 mean_circ: 0.922518
Ran for 187550 frames Cell Events: 4533 mean_circ: 0.922482
Ran for 188050 frames Cell Events: 4541 mean_circ: 0.922484
Ran for 188550 frames Cell Events: 4551 mean_circ: 0.922494
Ran for 189050 frames Cell Events: 4578 mean_circ: 0.922448
Ran for 190550 frames Cell Events: 4617 mean_circ: 0.922437
Ran for 191050 frames Cell Events: 4629 mean_circ: 0.922442
Ran for 191550 frames Cell Events: 4644 mean_circ: 0.922389
Ran for 192050 frames Cell Events: 4662 mean_circ: 0.922453
Ran for 192550 frames Cell Events: 4679 mean_circ: 0.922509
Ran for 193050 frames Cell Events: 4692 mean_circ: 0.92252
Ran for 193550 frames Cell Events: 4705 mean_circ: 0.922541
Ran for 194550 frames Cell Events: 4725 mean_circ: 0.922527
Ran for 195050 frames Cell Events: 4732 mean_circ: 0.922518
Ran for 195550 frames Cell Events: 4745 mean_circ: 0.922571
Ran for 196550 frames Cell Events: 4776 mean_circ: 0.92246
Ran for 197050 frames Cell Events: 4793 mean_circ: 0.922456
Ran for 197550 frames Cell Events: 4802 mean_circ: 0.922434
Ran for 198050 frames Cell Events: 4814 mean_circ: 0.922407
Ran for 199050 frames Cell Events: 4842 mean_circ: 0.922492
Ran for 199550 frames Cell Events: 4857 mean_circ: 0.922538
Ran for 200050 frames Cell Events: 4870 mean_circ: 0.922518
Ran for 200550 frames Cell Events: 4879 mean_circ: 0.922504
Ran for 201050 frames Cell Events: 4888 mean_circ: 0.92254
Ran for 201550 frames Cell Events: 4897 mean_circ: 0.922568
Ran for 202050 frames Cell Events: 4901 mean_circ: 0.922581
Ran for 202550 frames Cell Events: 4912 mean_circ: 0.922566
Ran for 203050 frames Cell Events: 4922 mean_circ: 0.922558
Ran for 203550 frames Cell Events: 4935 mean_circ: 0.922567
Ran for 204550 frames Cell Events: 4952 mean_circ: 0.922574
Ran for 205050 frames Cell Events: 4967 mean_circ: 0.922621
Ran for 205550 frames Cell Events: 4973 mean_circ: 0.922602
Ran for 206550 frames Cell Events: 4990 mean_circ: 0.922579
Ran for 207050 frames Cell Events: 5005 mean_circ: 0.922512
Ran for 207550 frames Cell Events: 5019 mean_circ: 0.922555
Ran for 208050 frames Cell Events: 5029 mean_circ: 0.922561
Ran for 208550 frames Cell Events: 5037 mean_circ: 0.922566
Ran for 209050 frames Cell Events: 5047 mean_circ: 0.92257
Ran for 209550 frames Cell Events: 5061 mean_circ: 0.922552
Ran for 210050 frames Cell Events: 5069 mean_circ: 0.922541
Ran for 211050 frames Cell Events: 5104 mean_circ: 0.922535
Ran for 211550 frames Cell Events: 5113 mean_circ: 0.922538
Ran for 212050 frames Cell Events: 5122 mean_circ: 0.922527
Ran for 212550 frames Cell Events: 5138 mean_circ: 0.922541
Ran for 213050 frames Cell Events: 5152 mean_circ: 0.922432
Ran for 213550 frames Cell Events: 5175 mean_circ: 0.922436
Ran for 214050 frames Cell Events: 5183 mean_circ: 0.922435
Ran for 214550 frames Cell Events: 5195 mean_circ: 0.92247
Ran for 215550 frames Cell Events: 5209 mean_circ: 0.922437
Ran for 216550 frames Cell Events: 5228 mean_circ: 0.922487
Ran for 217050 frames Cell Events: 5237 mean_circ: 0.922466
Ran for 217550 frames Cell Events: 5251 mean_circ: 0.922486
Ran for 218050 frames Cell Events: 5266 mean_circ: 0.922514
Ran for 218550 frames Cell Events: 5274 mean_circ: 0.922547
Ran for 219050 frames Cell Events: 5282 mean_circ: 0.922524
Ran for 219550 frames Cell Events: 5293 mean_circ: 0.922533
Ran for 220550 frames Cell Events: 5320 mean_circ: 0.922608
Ran for 221050 frames Cell Events: 5335 mean_circ: 0.922661
Ran for 222550 frames Cell Events: 5396 mean_circ: 0.922456
Ran for 223050 frames Cell Events: 5420 mean_circ: 0.922488
Ran for 223550 frames Cell Events: 5432 mean_circ: 0.922473
Ran for 224050 frames Cell Events: 5453 mean_circ: 0.922506
Ran for 224550 frames Cell Events: 5472 mean_circ: 0.922395
Ran for 225050 frames Cell Events: 5484 mean_circ: 0.922374
Ran for 225550 frames Cell Events: 5500 mean_circ: 0.922413
Ran for 226050 frames Cell Events: 5509 mean_circ: 0.922387
Ran for 226550 frames Cell Events: 5519 mean_circ: 0.92239
Ran for 228050 frames Cell Events: 5557 mean_circ: 0.922388
Ran for 228550 frames Cell Events: 5569 mean_circ: 0.922409
Ran for 230550 frames Cell Events: 5626 mean_circ: 0.922422
Ran for 231050 frames Cell Events: 5634 mean_circ: 0.922407
Ran for 231550 frames Cell Events: 5647 mean_circ: 0.922419
Ran for 232050 frames Cell Events: 5661 mean_circ: 0.922377
Ran for 232550 frames Cell Events: 5668 mean_circ: 0.922331
Ran for 233550 frames Cell Events: 5694 mean_circ: 0.922393
Ran for 234050 frames Cell Events: 5705 mean_circ: 0.922383
Ran for 234550 frames Cell Events: 5708 mean_circ: 0.922347
Ran for 235050 frames Cell Events: 5715 mean_circ: 0.922341
Ran for 235550 frames Cell Events: 5729 mean_circ: 0.92234
Ran for 236050 frames Cell Events: 5749 mean_circ: 0.922349
Ran for 236550 frames Cell Events: 5764 mean_circ: 0.922291
Ran for 237050 frames Cell Events: 5780 mean_circ: 0.922256
Ran for 238050 frames Cell Events: 5805 mean_circ: 0.922255
Ran for 238550 frames Cell Events: 5821 mean_circ: 0.922243
Ran for 239050 frames Cell Events: 5832 mean_circ: 0.92223
Ran for 239550 frames Cell Events: 5842 mean_circ: 0.922244
Ran for 240050 frames Cell Events: 5855 mean_circ: 0.922256
Ran for 240550 frames Cell Events: 5867 mean_circ: 0.92222
Ran for 241050 frames Cell Events: 5881 mean_circ: 0.922222
Ran for 241550 frames Cell Events: 5891 mean_circ: 0.922204
Ran for 242550 frames Cell Events: 5916 mean_circ: 0.922108
Ran for 243050 frames Cell Events: 5931 mean_circ: 0.922109
Ran for 243550 frames Cell Events: 5946 mean_circ: 0.922057
Ran for 244050 frames Cell Events: 5960 mean_circ: 0.922051
Ran for 244550 frames Cell Events: 5972 mean_circ: 0.922047
Ran for 245550 frames Cell Events: 5988 mean_circ: 0.922045
Ran for 246050 frames Cell Events: 6001 mean_circ: 0.922037
Ran for 246550 frames Cell Events: 6020 mean_circ: 0.922047
Ran for 247050 frames Cell Events: 6027 mean_circ: 0.922058
Ran for 247550 frames Cell Events: 6035 mean_circ: 0.922068
Ran for 248050 frames Cell Events: 6056 mean_circ: 0.922126
Ran for 248550 frames Cell Events: 6067 mean_circ: 0.922175
Ran for 249050 frames Cell Events: 6082 mean_circ: 0.922183
Ran for 249550 frames Cell Events: 6090 mean_circ: 0.922144
Ran for 250050 frames Cell Events: 6100 mean_circ: 0.92217
Ran for 250550 frames Cell Events: 6116 mean_circ: 0.922151
Ran for 251050 frames Cell Events: 6122 mean_circ: 0.922166
Ran for 251550 frames Cell Events: 6129 mean_circ: 0.922174
Ran for 252050 frames Cell Events: 6140 mean_circ: 0.922171
Ran for 252550 frames Cell Events: 6148 mean_circ: 0.922201
Ran for 253050 frames Cell Events: 6157 mean_circ: 0.922161
Ran for 253550 frames Cell Events: 6166 mean_circ: 0.922091
Ran for 254050 frames Cell Events: 6178 mean_circ: 0.922067
Ran for 254550 frames Cell Events: 6188 mean_circ: 0.922071
Ran for 255050 frames Cell Events: 6202 mean_circ: 0.92207
Ran for 255550 frames Cell Events: 6214 mean_circ: 0.922132
Ran for 256050 frames Cell Events: 6223 mean_circ: 0.92213
Ran for 256550 frames Cell Events: 6239 mean_circ: 0.922136
Ran for 257050 frames Cell Events: 6252 mean_circ: 0.922137
Ran for 258050 frames Cell Events: 6277 mean_circ: 0.922179
Ran for 259050 frames Cell Events: 6299 mean_circ: 0.922179
Ran for 259550 frames Cell Events: 6309 mean_circ: 0.922172
Ran for 260050 frames Cell Events: 6330 mean_circ: 0.92219
Ran for 260550 frames Cell Events: 6346 mean_circ: 0.922168
Ran for 261050 frames Cell Events: 6362 mean_circ: 0.922163
Ran for 261550 frames Cell Events: 6369 mean_circ: 0.922197
Ran for 262550 frames Cell Events: 6413 mean_circ: 0.922242
Ran for 263050 frames Cell Events: 6432 mean_circ: 0.922207
Ran for 263550 frames Cell Events: 6444 mean_circ: 0.922147
Ran for 264050 frames Cell Events: 6461 mean_circ: 0.922132
Ran for 264550 frames Cell Events: 6473 mean_circ: 0.92211
Ran for 265050 frames Cell Events: 6484 mean_circ: 0.922139
Ran for 265550 frames Cell Events: 6491 mean_circ: 0.922145
Ran for 266050 frames Cell Events: 6504 mean_circ: 0.922152
Ran for 266550 frames Cell Events: 6511 mean_circ: 0.922184
Ran for 267050 frames Cell Events: 6530 mean_circ: 0.922114
Ran for 267550 frames Cell Events: 6540 mean_circ: 0.922106
Ran for 268050 frames Cell Events: 6559 mean_circ: 0.922126
Ran for 268550 frames Cell Events: 6574 mean_circ: 0.922116
Ran for 269050 frames Cell Events: 6584 mean_circ: 0.922133
Ran for 269550 frames Cell Events: 6591 mean_circ: 0.922154
Ran for 270050 frames Cell Events: 6611 mean_circ: 0.92216
Ran for 270550 frames Cell Events: 6621 mean_circ: 0.922207
Ran for 271050 frames Cell Events: 6634 mean_circ: 0.922225
Ran for 271550 frames Cell Events: 6648 mean_circ: 0.922192
Ran for 272050 frames Cell Events: 6656 mean_circ: 0.922203
Ran for 272550 frames Cell Events: 6664 mean_circ: 0.922214
Ran for 273550 frames Cell Events: 6690 mean_circ: 0.92216
Ran for 274050 frames Cell Events: 6704 mean_circ: 0.922189
Ran for 274550 frames Cell Events: 6722 mean_circ: 0.922194
Ran for 275050 frames Cell Events: 6737 mean_circ: 0.922171
Ran for 275550 frames Cell Events: 6752 mean_circ: 0.922161
Ran for 276050 frames Cell Events: 6763 mean_circ: 0.922137
Ran for 278550 frames Cell Events: 6806 mean_circ: 0.922132
Ran for 279050 frames Cell Events: 6817 mean_circ: 0.922113
Ran for 279550 frames Cell Events: 6830 mean_circ: 0.922116
Ran for 280050 frames Cell Events: 6846 mean_circ: 0.922099
Ran for 281050 frames Cell Events: 6857 mean_circ: 0.922082
Ran for 282050 frames Cell Events: 6883 mean_circ: 0.922024
Ran for 282550 frames Cell Events: 6904 mean_circ: 0.922037
Ran for 283050 frames Cell Events: 6928 mean_circ: 0.922037
Ran for 283550 frames Cell Events: 6944 mean_circ: 0.921993
Ran for 284050 frames Cell Events: 6956 mean_circ: 0.921965
Ran for 284550 frames Cell Events: 6965 mean_circ: 0.921924
Ran for 285050 frames Cell Events: 6985 mean_circ: 0.921919
Ran for 285550 frames Cell Events: 6999 mean_circ: 0.921895
Ran for 286050 frames Cell Events: 7008 mean_circ: 0.921909
Ran for 286550 frames Cell Events: 7012 mean_circ: 0.921889
Ran for 287550 frames Cell Events: 7037 mean_circ: 0.92192
Ran for 288550 frames Cell Events: 7059 mean_circ: 0.921947
Ran for 290050 frames Cell Events: 7077 mean_circ: 0.921969
Ran for 290550 frames Cell Events: 7080 mean_circ: 0.921984
Ran for 291050 frames Cell Events: 7100 mean_circ: 0.921988
Ran for 291550 frames Cell Events: 7117 mean_circ: 0.92196
Ran for 292050 frames Cell Events: 7139 mean_circ: 0.921985
Ran for 292550 frames Cell Events: 7150 mean_circ: 0.921987
Ran for 293050 frames Cell Events: 7161 mean_circ: 0.922003
Ran for 293550 frames Cell Events: 7169 mean_circ: 0.921992
Ran for 294550 frames Cell Events: 7202 mean_circ: 0.922026
Ran for 295050 frames Cell Events: 7206 mean_circ: 0.922018
Ran for 295550 frames Cell Events: 7222 mean_circ: 0.922006
Ran for 296050 frames Cell Events: 7233 mean_circ: 0.922022
Ran for 296550 frames Cell Events: 7245 mean_circ: 0.922007
Ran for 297050 frames Cell Events: 7255 mean_circ: 0.922034
Ran for 297550 frames Cell Events: 7267 mean_circ: 0.922034
Ran for 299050 frames Cell Events: 7294 mean_circ: 0.921998
Ran for 299550 frames Cell Events: 7306 mean_circ: 0.922
Ran for 300050 frames Cell Events: 7319 mean_circ: 0.921989
Ran for 300550 frames Cell Events: 7337 mean_circ: 0.921996
Ran for 301050 frames Cell Events: 7354 mean_circ: 0.922002
Ran for 301550 frames Cell Events: 7364 mean_circ: 0.921928
Ran for 302050 frames Cell Events: 7373 mean_circ: 0.92193
Ran for 303050 frames Cell Events: 7392 mean_circ: 0.921913
Ran for 303550 frames Cell Events: 7406 mean_circ: 0.921912
Ran for 304050 frames Cell Events: 7414 mean_circ: 0.921885
Ran for 304550 frames Cell Events: 7425 mean_circ: 0.921888
Ran for 305050 frames Cell Events: 7438 mean_circ: 0.92191
Ran for 305550 frames Cell Events: 7447 mean_circ: 0.921939
Ran for 306550 frames Cell Events: 7473 mean_circ: 0.921938
Ran for 307050 frames Cell Events: 7486 mean_circ: 0.921911
Ran for 308050 frames Cell Events: 7515 mean_circ: 0.921846
Ran for 308550 frames Cell Events: 7527 mean_circ: 0.921877
Ran for 309050 frames Cell Events: 7542 mean_circ: 0.921883
Ran for 309550 frames Cell Events: 7558 mean_circ: 0.921834
Ran for 311050 frames Cell Events: 7617 mean_circ: 0.921825
Ran for 311550 frames Cell Events: 7637 mean_circ: 0.921845
Ran for 313050 frames Cell Events: 7686 mean_circ: 0.921848
Ran for 313550 frames Cell Events: 7709 mean_circ: 0.92184
Ran for 314050 frames Cell Events: 7724 mean_circ: 0.92182
Ran for 314550 frames Cell Events: 7739 mean_circ: 0.921861
Ran for 315050 frames Cell Events: 7746 mean_circ: 0.921845
Ran for 315550 frames Cell Events: 7762 mean_circ: 0.92184
Ran for 316050 frames Cell Events: 7776 mean_circ: 0.921843
Ran for 316550 frames Cell Events: 7796 mean_circ: 0.921842
Ran for 317050 frames Cell Events: 7812 mean_circ: 0.921872
Ran for 317550 frames Cell Events: 7822 mean_circ: 0.921913
Ran for 318050 frames Cell Events: 7837 mean_circ: 0.921926
Ran for 318550 frames Cell Events: 7848 mean_circ: 0.921918
Ran for 320050 frames Cell Events: 7899 mean_circ: 0.921836
Ran for 321050 frames Cell Events: 7931 mean_circ: 0.921897
Ran for 321550 frames Cell Events: 7942 mean_circ: 0.921863
Ran for 322050 frames Cell Events: 7952 mean_circ: 0.921883
Ran for 322550 frames Cell Events: 7964 mean_circ: 0.921882
Ran for 323050 frames Cell Events: 7980 mean_circ: 0.921848
Ran for 323550 frames Cell Events: 7988 mean_circ: 0.921827
Ran for 324050 frames Cell Events: 8000 mean_circ: 0.921864
Ran for 324550 frames Cell Events: 8006 mean_circ: 0.921859
Ran for 325050 frames Cell Events: 8014 mean_circ: 0.921822
End this measurment..
Stopping time: 6.33855e+008
****************************************
Measurement finished
Mean Circularitiy: 0.921827
Mean Area: 720.951
Mean FL-1 intensity: 4224.51
Mean FL-2 intensity: 5983.03
Mean FL-3 intensity: 0
frames processed: 321932
Total Time: 162630ms
Number of Runs (new bg img) 0
Frames collected: 325110
Skipped frames: 60256
Rescued Frames: 2926195
Samples DAQ: 81279543
Samples written: 162555158
Samples per Channel: 81277579
FPS: 1999.07
Samples per second: 499769
Expected samples/s: 500000
Events: 8017
Events per second: 49.2958
jumped back (PMT): 11
#Frames read, frequency
# 0 frames :414216
# 1 frames :216705
# 2 frames :6373
# 3 frames :1707
# 4 frames :693
# 5 frames :215
# 6 frames :3632
# 7 frames :2476
# 8 frames :1459
# 9 frames :523
# 10 frames :356
# 11 frames :365
# 12 frames :497
# 13 frames :247
# 14 frames :203
# 15 frames :141
# 16 frames :70
# 17 frames :56
# 18 frames :44
# 19 frames :22
# 20 frames :31
# 21 frames :21
# 22 frames :16
# 23 frames :8
# 24 frames :11
# 25 frames :6
# 26 frames :5
# 27 frames :6
# 28 frames :4
# 29 frames :3
# 30 frames :3
# 31 frames :2
# 32 frames :1
# 33 frames :1
# 34 frames :2
# 36 frames :1
# 37 frames :1
# 38 frames :1
# 39 frames :1
# 41 frames :1
# 43 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.6848
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0