Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-09_19.44.07
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "7f2d39d74c7982a4b4df17c4728af099",
"name": "M1_20170522_1823_dsRNA_M3_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "17:44:27"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8034 (max 8036) in '8034'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.3377
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 6.40824e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 20 mean_circ: 0.889637
Ran for 1050 frames Cell Events: 33 mean_circ: 0.914014
Ran for 2050 frames Cell Events: 58 mean_circ: 0.930115
Ran for 2550 frames Cell Events: 79 mean_circ: 0.932719
Ran for 3550 frames Cell Events: 110 mean_circ: 0.935922
Ran for 4050 frames Cell Events: 126 mean_circ: 0.935989
Ran for 4550 frames Cell Events: 142 mean_circ: 0.937373
Ran for 5050 frames Cell Events: 154 mean_circ: 0.939293
Ran for 5550 frames Cell Events: 164 mean_circ: 0.939959
Ran for 6050 frames Cell Events: 190 mean_circ: 0.941995
Ran for 6550 frames Cell Events: 209 mean_circ: 0.940663
Ran for 7050 frames Cell Events: 226 mean_circ: 0.940236
Ran for 7550 frames Cell Events: 240 mean_circ: 0.940338
Ran for 8050 frames Cell Events: 254 mean_circ: 0.940053
Ran for 8550 frames Cell Events: 260 mean_circ: 0.939929
Ran for 9050 frames Cell Events: 278 mean_circ: 0.940208
Ran for 10050 frames Cell Events: 314 mean_circ: 0.941757
Ran for 10550 frames Cell Events: 327 mean_circ: 0.940499
Ran for 12050 frames Cell Events: 386 mean_circ: 0.94001
Ran for 12550 frames Cell Events: 402 mean_circ: 0.940485
Ran for 13050 frames Cell Events: 416 mean_circ: 0.941273
Ran for 13550 frames Cell Events: 444 mean_circ: 0.941419
Ran for 14050 frames Cell Events: 456 mean_circ: 0.940644
Ran for 15050 frames Cell Events: 487 mean_circ: 0.941184
Ran for 15550 frames Cell Events: 508 mean_circ: 0.941695
Ran for 16050 frames Cell Events: 524 mean_circ: 0.941782
Ran for 16550 frames Cell Events: 537 mean_circ: 0.941884
Ran for 17050 frames Cell Events: 547 mean_circ: 0.941964
Ran for 17550 frames Cell Events: 564 mean_circ: 0.941971
Ran for 18050 frames Cell Events: 583 mean_circ: 0.941946
Ran for 19050 frames Cell Events: 617 mean_circ: 0.942087
Ran for 20550 frames Cell Events: 666 mean_circ: 0.94228
Ran for 21050 frames Cell Events: 679 mean_circ: 0.942257
Ran for 21550 frames Cell Events: 697 mean_circ: 0.941773
Ran for 22050 frames Cell Events: 709 mean_circ: 0.941956
Ran for 22550 frames Cell Events: 725 mean_circ: 0.942132
Ran for 23050 frames Cell Events: 739 mean_circ: 0.942399
Ran for 24050 frames Cell Events: 781 mean_circ: 0.94235
Ran for 25050 frames Cell Events: 813 mean_circ: 0.942963
Ran for 25550 frames Cell Events: 831 mean_circ: 0.94268
Ran for 26550 frames Cell Events: 858 mean_circ: 0.942856
Ran for 27050 frames Cell Events: 876 mean_circ: 0.942817
Ran for 27550 frames Cell Events: 903 mean_circ: 0.942717
Ran for 28050 frames Cell Events: 917 mean_circ: 0.942641
Ran for 28550 frames Cell Events: 936 mean_circ: 0.942811
Ran for 29550 frames Cell Events: 967 mean_circ: 0.942462
Ran for 30550 frames Cell Events: 1006 mean_circ: 0.942469
Ran for 31050 frames Cell Events: 1018 mean_circ: 0.942623
Ran for 31550 frames Cell Events: 1032 mean_circ: 0.942611
Ran for 32050 frames Cell Events: 1052 mean_circ: 0.942484
Ran for 32550 frames Cell Events: 1080 mean_circ: 0.942793
Ran for 33050 frames Cell Events: 1096 mean_circ: 0.942681
Ran for 34050 frames Cell Events: 1147 mean_circ: 0.942985
Ran for 34550 frames Cell Events: 1162 mean_circ: 0.943075
Ran for 35050 frames Cell Events: 1178 mean_circ: 0.943105
Ran for 36050 frames Cell Events: 1216 mean_circ: 0.943443
Ran for 36550 frames Cell Events: 1240 mean_circ: 0.943313
Ran for 37550 frames Cell Events: 1279 mean_circ: 0.943143
Ran for 38050 frames Cell Events: 1303 mean_circ: 0.943248
Ran for 39050 frames Cell Events: 1378 mean_circ: 0.943085
Ran for 39550 frames Cell Events: 1396 mean_circ: 0.943129
Ran for 40050 frames Cell Events: 1423 mean_circ: 0.943077
Ran for 40550 frames Cell Events: 1447 mean_circ: 0.942748
Ran for 41050 frames Cell Events: 1462 mean_circ: 0.942897
Ran for 42550 frames Cell Events: 1525 mean_circ: 0.942887
Ran for 43550 frames Cell Events: 1571 mean_circ: 0.943019
Ran for 44550 frames Cell Events: 1624 mean_circ: 0.943041
Ran for 45050 frames Cell Events: 1637 mean_circ: 0.943077
Ran for 45550 frames Cell Events: 1650 mean_circ: 0.943201
Ran for 46050 frames Cell Events: 1675 mean_circ: 0.943248
Ran for 47550 frames Cell Events: 1727 mean_circ: 0.943167
Ran for 49050 frames Cell Events: 1797 mean_circ: 0.943098
Ran for 49550 frames Cell Events: 1813 mean_circ: 0.943304
Ran for 50050 frames Cell Events: 1831 mean_circ: 0.943363
Ran for 51050 frames Cell Events: 1879 mean_circ: 0.942962
Ran for 51550 frames Cell Events: 1902 mean_circ: 0.942848
Ran for 52050 frames Cell Events: 1922 mean_circ: 0.942822
Ran for 52550 frames Cell Events: 1951 mean_circ: 0.942822
Ran for 53050 frames Cell Events: 1972 mean_circ: 0.942972
Ran for 53550 frames Cell Events: 1992 mean_circ: 0.942984
Ran for 54550 frames Cell Events: 2038 mean_circ: 0.943061
Ran for 55550 frames Cell Events: 2068 mean_circ: 0.942928
Ran for 56550 frames Cell Events: 2107 mean_circ: 0.94311
Ran for 57050 frames Cell Events: 2136 mean_circ: 0.94311
Ran for 57550 frames Cell Events: 2162 mean_circ: 0.942871
Ran for 58050 frames Cell Events: 2178 mean_circ: 0.942553
Ran for 60050 frames Cell Events: 2262 mean_circ: 0.942682
Ran for 60550 frames Cell Events: 2273 mean_circ: 0.942687
Ran for 61050 frames Cell Events: 2296 mean_circ: 0.942642
Ran for 61550 frames Cell Events: 2314 mean_circ: 0.942615
Ran for 62050 frames Cell Events: 2332 mean_circ: 0.94273
Ran for 63050 frames Cell Events: 2374 mean_circ: 0.942753
Ran for 63550 frames Cell Events: 2389 mean_circ: 0.942718
Ran for 64550 frames Cell Events: 2425 mean_circ: 0.942731
Ran for 65050 frames Cell Events: 2436 mean_circ: 0.942803
Ran for 65550 frames Cell Events: 2455 mean_circ: 0.942849
Ran for 66550 frames Cell Events: 2484 mean_circ: 0.942945
Ran for 67050 frames Cell Events: 2496 mean_circ: 0.942988
Ran for 67550 frames Cell Events: 2507 mean_circ: 0.943033
Ran for 68050 frames Cell Events: 2524 mean_circ: 0.943041
Ran for 68550 frames Cell Events: 2550 mean_circ: 0.943026
Ran for 69050 frames Cell Events: 2568 mean_circ: 0.943087
Ran for 69550 frames Cell Events: 2591 mean_circ: 0.943113
Ran for 70550 frames Cell Events: 2635 mean_circ: 0.942949
Ran for 72050 frames Cell Events: 2696 mean_circ: 0.942984
Ran for 72550 frames Cell Events: 2710 mean_circ: 0.942999
Ran for 73050 frames Cell Events: 2718 mean_circ: 0.943054
Ran for 74050 frames Cell Events: 2748 mean_circ: 0.943115
Ran for 74550 frames Cell Events: 2759 mean_circ: 0.943082
Ran for 75050 frames Cell Events: 2776 mean_circ: 0.943044
Ran for 76050 frames Cell Events: 2797 mean_circ: 0.942997
Ran for 76550 frames Cell Events: 2811 mean_circ: 0.942943
Ran for 77550 frames Cell Events: 2846 mean_circ: 0.94281
Ran for 78050 frames Cell Events: 2864 mean_circ: 0.942863
Ran for 79550 frames Cell Events: 2910 mean_circ: 0.942966
Ran for 80050 frames Cell Events: 2922 mean_circ: 0.942887
Ran for 80550 frames Cell Events: 2937 mean_circ: 0.942897
Ran for 81050 frames Cell Events: 2968 mean_circ: 0.942917
Ran for 82050 frames Cell Events: 3009 mean_circ: 0.942811
Ran for 82550 frames Cell Events: 3024 mean_circ: 0.942729
Ran for 83050 frames Cell Events: 3044 mean_circ: 0.942675
Ran for 83550 frames Cell Events: 3056 mean_circ: 0.94272
Ran for 84050 frames Cell Events: 3067 mean_circ: 0.942766
Ran for 84550 frames Cell Events: 3085 mean_circ: 0.942817
Ran for 85050 frames Cell Events: 3109 mean_circ: 0.942826
Ran for 85550 frames Cell Events: 3124 mean_circ: 0.942859
Ran for 87050 frames Cell Events: 3199 mean_circ: 0.942964
Ran for 87550 frames Cell Events: 3220 mean_circ: 0.942936
Ran for 88050 frames Cell Events: 3233 mean_circ: 0.942978
Ran for 88550 frames Cell Events: 3250 mean_circ: 0.942974
Ran for 89050 frames Cell Events: 3272 mean_circ: 0.943028
Ran for 91050 frames Cell Events: 3362 mean_circ: 0.943018
Ran for 91550 frames Cell Events: 3374 mean_circ: 0.943057
Ran for 92050 frames Cell Events: 3391 mean_circ: 0.943098
Ran for 92550 frames Cell Events: 3416 mean_circ: 0.943113
Ran for 93050 frames Cell Events: 3442 mean_circ: 0.943106
Ran for 93550 frames Cell Events: 3464 mean_circ: 0.94309
Ran for 94050 frames Cell Events: 3484 mean_circ: 0.943159
Ran for 94550 frames Cell Events: 3498 mean_circ: 0.94319
Ran for 95050 frames Cell Events: 3519 mean_circ: 0.943183
Ran for 95550 frames Cell Events: 3541 mean_circ: 0.943303
Ran for 96050 frames Cell Events: 3550 mean_circ: 0.943335
Ran for 96550 frames Cell Events: 3569 mean_circ: 0.943362
Ran for 97050 frames Cell Events: 3588 mean_circ: 0.943412
Ran for 98050 frames Cell Events: 3632 mean_circ: 0.943462
Ran for 98550 frames Cell Events: 3652 mean_circ: 0.943495
Ran for 99050 frames Cell Events: 3678 mean_circ: 0.94356
Ran for 99550 frames Cell Events: 3701 mean_circ: 0.943602
Ran for 100050 frames Cell Events: 3718 mean_circ: 0.943611
Ran for 102050 frames Cell Events: 3807 mean_circ: 0.94348
Ran for 102550 frames Cell Events: 3818 mean_circ: 0.943438
Ran for 104050 frames Cell Events: 3873 mean_circ: 0.943527
Ran for 105550 frames Cell Events: 3938 mean_circ: 0.943584
Ran for 106050 frames Cell Events: 3954 mean_circ: 0.943584
Ran for 106550 frames Cell Events: 3972 mean_circ: 0.943585
Ran for 107050 frames Cell Events: 4002 mean_circ: 0.943651
Ran for 107550 frames Cell Events: 4023 mean_circ: 0.94364
Ran for 108050 frames Cell Events: 4030 mean_circ: 0.943593
Ran for 109050 frames Cell Events: 4075 mean_circ: 0.943635
Ran for 109550 frames Cell Events: 4091 mean_circ: 0.943622
Ran for 110550 frames Cell Events: 4135 mean_circ: 0.943644
Ran for 111050 frames Cell Events: 4151 mean_circ: 0.943659
Ran for 111550 frames Cell Events: 4171 mean_circ: 0.943694
Ran for 112050 frames Cell Events: 4186 mean_circ: 0.9437
Ran for 113050 frames Cell Events: 4224 mean_circ: 0.943703
Ran for 114050 frames Cell Events: 4254 mean_circ: 0.943772
Ran for 114550 frames Cell Events: 4273 mean_circ: 0.943791
Ran for 115550 frames Cell Events: 4326 mean_circ: 0.943822
Ran for 116050 frames Cell Events: 4344 mean_circ: 0.94381
Ran for 117050 frames Cell Events: 4390 mean_circ: 0.943826
Ran for 117550 frames Cell Events: 4412 mean_circ: 0.94387
Ran for 119050 frames Cell Events: 4463 mean_circ: 0.943882
Ran for 120050 frames Cell Events: 4508 mean_circ: 0.943834
Ran for 120550 frames Cell Events: 4527 mean_circ: 0.943796
Ran for 121550 frames Cell Events: 4562 mean_circ: 0.94391
Ran for 122550 frames Cell Events: 4607 mean_circ: 0.944015
Ran for 123050 frames Cell Events: 4627 mean_circ: 0.944033
Ran for 123550 frames Cell Events: 4652 mean_circ: 0.944102
Ran for 124050 frames Cell Events: 4667 mean_circ: 0.944116
Ran for 124550 frames Cell Events: 4684 mean_circ: 0.944158
Ran for 125550 frames Cell Events: 4724 mean_circ: 0.944212
Ran for 126050 frames Cell Events: 4741 mean_circ: 0.944273
Ran for 126550 frames Cell Events: 4762 mean_circ: 0.944285
Ran for 127050 frames Cell Events: 4775 mean_circ: 0.944315
Ran for 127550 frames Cell Events: 4798 mean_circ: 0.944316
Ran for 129050 frames Cell Events: 4867 mean_circ: 0.944233
Ran for 130050 frames Cell Events: 4921 mean_circ: 0.944092
Ran for 130550 frames Cell Events: 4944 mean_circ: 0.944082
Ran for 131050 frames Cell Events: 4958 mean_circ: 0.944106
Ran for 131550 frames Cell Events: 4982 mean_circ: 0.944095
Ran for 132050 frames Cell Events: 4995 mean_circ: 0.944127
Ran for 132550 frames Cell Events: 5012 mean_circ: 0.944162
Ran for 133550 frames Cell Events: 5057 mean_circ: 0.944135
Ran for 134050 frames Cell Events: 5067 mean_circ: 0.944126
Ran for 134550 frames Cell Events: 5087 mean_circ: 0.944139
Ran for 135050 frames Cell Events: 5107 mean_circ: 0.944175
Ran for 137050 frames Cell Events: 5174 mean_circ: 0.944151
Ran for 137550 frames Cell Events: 5182 mean_circ: 0.944161
Ran for 138050 frames Cell Events: 5204 mean_circ: 0.944123
Ran for 138550 frames Cell Events: 5225 mean_circ: 0.944099
Ran for 139550 frames Cell Events: 5254 mean_circ: 0.943979
Ran for 140050 frames Cell Events: 5277 mean_circ: 0.943996
Ran for 140550 frames Cell Events: 5297 mean_circ: 0.943958
Ran for 141050 frames Cell Events: 5316 mean_circ: 0.943997
Ran for 141550 frames Cell Events: 5330 mean_circ: 0.943961
Ran for 142050 frames Cell Events: 5352 mean_circ: 0.943982
Ran for 144050 frames Cell Events: 5436 mean_circ: 0.944007
Ran for 145050 frames Cell Events: 5477 mean_circ: 0.944011
Ran for 145550 frames Cell Events: 5506 mean_circ: 0.944
Ran for 146550 frames Cell Events: 5541 mean_circ: 0.943973
Ran for 147050 frames Cell Events: 5556 mean_circ: 0.943993
Ran for 147550 frames Cell Events: 5575 mean_circ: 0.944009
Ran for 148050 frames Cell Events: 5597 mean_circ: 0.943971
Ran for 148550 frames Cell Events: 5608 mean_circ: 0.943975
Ran for 149550 frames Cell Events: 5642 mean_circ: 0.944005
Ran for 150550 frames Cell Events: 5677 mean_circ: 0.943995
Ran for 151050 frames Cell Events: 5704 mean_circ: 0.943993
Ran for 151550 frames Cell Events: 5728 mean_circ: 0.944002
Ran for 152550 frames Cell Events: 5780 mean_circ: 0.944052
Ran for 153050 frames Cell Events: 5797 mean_circ: 0.944054
Ran for 153550 frames Cell Events: 5821 mean_circ: 0.944099
Ran for 154050 frames Cell Events: 5837 mean_circ: 0.94411
Ran for 154550 frames Cell Events: 5859 mean_circ: 0.9441
Ran for 155050 frames Cell Events: 5876 mean_circ: 0.944099
Ran for 155550 frames Cell Events: 5903 mean_circ: 0.944088
Ran for 156050 frames Cell Events: 5937 mean_circ: 0.944061
Ran for 157050 frames Cell Events: 5977 mean_circ: 0.944077
Ran for 158050 frames Cell Events: 6017 mean_circ: 0.944057
Ran for 159550 frames Cell Events: 6088 mean_circ: 0.944091
Ran for 160050 frames Cell Events: 6110 mean_circ: 0.944024
Ran for 161050 frames Cell Events: 6148 mean_circ: 0.944003
Ran for 161550 frames Cell Events: 6179 mean_circ: 0.944016
Ran for 163050 frames Cell Events: 6239 mean_circ: 0.944014
Ran for 164050 frames Cell Events: 6310 mean_circ: 0.943987
Ran for 164550 frames Cell Events: 6331 mean_circ: 0.944002
Ran for 165050 frames Cell Events: 6360 mean_circ: 0.944042
Ran for 165550 frames Cell Events: 6381 mean_circ: 0.944085
Ran for 166050 frames Cell Events: 6403 mean_circ: 0.944127
Ran for 167050 frames Cell Events: 6436 mean_circ: 0.944125
Ran for 167550 frames Cell Events: 6449 mean_circ: 0.944142
Ran for 168050 frames Cell Events: 6472 mean_circ: 0.944149
Ran for 168550 frames Cell Events: 6491 mean_circ: 0.944165
Ran for 169550 frames Cell Events: 6540 mean_circ: 0.944179
Ran for 171050 frames Cell Events: 6594 mean_circ: 0.944154
Ran for 171550 frames Cell Events: 6613 mean_circ: 0.944155
Ran for 174050 frames Cell Events: 6707 mean_circ: 0.944211
Ran for 175050 frames Cell Events: 6741 mean_circ: 0.944243
Ran for 175550 frames Cell Events: 6769 mean_circ: 0.944254
Ran for 176550 frames Cell Events: 6804 mean_circ: 0.944286
Ran for 177050 frames Cell Events: 6813 mean_circ: 0.944299
Ran for 177550 frames Cell Events: 6821 mean_circ: 0.944323
Ran for 178050 frames Cell Events: 6836 mean_circ: 0.944354
Ran for 178550 frames Cell Events: 6845 mean_circ: 0.944397
Ran for 179550 frames Cell Events: 6885 mean_circ: 0.94432
Ran for 180550 frames Cell Events: 6921 mean_circ: 0.944331
Ran for 182050 frames Cell Events: 6977 mean_circ: 0.944402
Ran for 182550 frames Cell Events: 6986 mean_circ: 0.94439
Ran for 183050 frames Cell Events: 7000 mean_circ: 0.944424
Ran for 184050 frames Cell Events: 7030 mean_circ: 0.944431
Ran for 185050 frames Cell Events: 7054 mean_circ: 0.944464
Ran for 185550 frames Cell Events: 7072 mean_circ: 0.944476
Ran for 186050 frames Cell Events: 7089 mean_circ: 0.944459
Ran for 186550 frames Cell Events: 7102 mean_circ: 0.944464
Ran for 187550 frames Cell Events: 7140 mean_circ: 0.944486
Ran for 188550 frames Cell Events: 7180 mean_circ: 0.944522
Ran for 189550 frames Cell Events: 7219 mean_circ: 0.944527
Ran for 190050 frames Cell Events: 7240 mean_circ: 0.944534
Ran for 190550 frames Cell Events: 7261 mean_circ: 0.944512
Ran for 191050 frames Cell Events: 7268 mean_circ: 0.944512
Ran for 192050 frames Cell Events: 7308 mean_circ: 0.944512
Ran for 193050 frames Cell Events: 7346 mean_circ: 0.944538
Ran for 194050 frames Cell Events: 7386 mean_circ: 0.944545
Ran for 194550 frames Cell Events: 7402 mean_circ: 0.944538
Ran for 196050 frames Cell Events: 7449 mean_circ: 0.944591
Ran for 196550 frames Cell Events: 7463 mean_circ: 0.944653
Ran for 197050 frames Cell Events: 7476 mean_circ: 0.944659
Ran for 197550 frames Cell Events: 7493 mean_circ: 0.944596
Ran for 198550 frames Cell Events: 7529 mean_circ: 0.94457
Ran for 199050 frames Cell Events: 7547 mean_circ: 0.944584
Ran for 200050 frames Cell Events: 7590 mean_circ: 0.944636
Ran for 200550 frames Cell Events: 7616 mean_circ: 0.944654
Ran for 201050 frames Cell Events: 7638 mean_circ: 0.94469
Ran for 201550 frames Cell Events: 7661 mean_circ: 0.944686
Ran for 202050 frames Cell Events: 7674 mean_circ: 0.944689
Ran for 202550 frames Cell Events: 7694 mean_circ: 0.944699
Ran for 204050 frames Cell Events: 7745 mean_circ: 0.944716
Ran for 205050 frames Cell Events: 7793 mean_circ: 0.944717
Ran for 205550 frames Cell Events: 7811 mean_circ: 0.944705
Ran for 207050 frames Cell Events: 7869 mean_circ: 0.944731
Ran for 207550 frames Cell Events: 7891 mean_circ: 0.944705
Ran for 209050 frames Cell Events: 7942 mean_circ: 0.944698
Ran for 210050 frames Cell Events: 7988 mean_circ: 0.944649
Ran for 210550 frames Cell Events: 8009 mean_circ: 0.944624
Ran for 211050 frames Cell Events: 8027 mean_circ: 0.944633
End this measurment..
Stopping time: 6.4093e+008
****************************************
Measurement finished
Mean Circularitiy: 0.944631
Mean Area: 635.366
Mean FL-1 intensity: 3208.4
Mean FL-2 intensity: 4400.65
Mean FL-3 intensity: 0
frames processed: 211038
Total Time: 105690ms
Number of Runs (new bg img) 0
Frames collected: 211265
Skipped frames: 96766
Rescued Frames: 4630440
Samples DAQ: 52816182
Samples written: 105632032
Samples per Channel: 52816016
FPS: 1998.91
Samples per second: 499726
Expected samples/s: 500000
Events: 8036
Events per second: 76.0337
jumped back (PMT): 5291
#Frames read, frequency
# 0 frames :293090
# 1 frames :113358
# 2 frames :4862
# 3 frames :1584
# 4 frames :713
# 5 frames :243
# 6 frames :1702
# 7 frames :2049
# 8 frames :1035
# 9 frames :586
# 10 frames :1536
# 11 frames :395
# 12 frames :328
# 13 frames :202
# 14 frames :144
# 15 frames :167
# 16 frames :126
# 17 frames :88
# 18 frames :64
# 19 frames :28
# 20 frames :29
# 21 frames :42
# 22 frames :33
# 23 frames :20
# 24 frames :18
# 25 frames :12
# 26 frames :4
# 27 frames :6
# 28 frames :4
# 29 frames :11
# 30 frames :12
# 31 frames :1
# 32 frames :4
# 34 frames :2
# 35 frames :3
# 36 frames :2
# 38 frames :2
# 40 frames :1
# 42 frames :1
# 45 frames :1
# 53 frames :2
# 56 frames :1
# 65 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.3377
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0