Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-09_20.07.40
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "c1126fcaab6ab6faded41cd82b66bcbc",
"name": "M1_20170523_1830_dsRNA_I3_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "18:08:05"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 9823 (max 9824) in '9823'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.2039
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 7.27648e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 9 mean_circ: 0.947851
Ran for 1050 frames Cell Events: 21 mean_circ: 0.948092
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Ran for 82550 frames Cell Events: 1962 mean_circ: 0.9417
Ran for 83050 frames Cell Events: 1981 mean_circ: 0.941687
Ran for 83550 frames Cell Events: 1991 mean_circ: 0.941735
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Ran for 125550 frames Cell Events: 3108 mean_circ: 0.942026
Ran for 126050 frames Cell Events: 3117 mean_circ: 0.94203
Ran for 126550 frames Cell Events: 3130 mean_circ: 0.942116
Ran for 127050 frames Cell Events: 3141 mean_circ: 0.942137
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Ran for 182050 frames Cell Events: 4547 mean_circ: 0.94219
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Ran for 186050 frames Cell Events: 4653 mean_circ: 0.942197
Ran for 187050 frames Cell Events: 4697 mean_circ: 0.942157
Ran for 187550 frames Cell Events: 4712 mean_circ: 0.942049
Ran for 188050 frames Cell Events: 4727 mean_circ: 0.942058
Ran for 189550 frames Cell Events: 4785 mean_circ: 0.94213
Ran for 190050 frames Cell Events: 4792 mean_circ: 0.942109
Ran for 190550 frames Cell Events: 4806 mean_circ: 0.942156
Ran for 191050 frames Cell Events: 4825 mean_circ: 0.942169
Ran for 192050 frames Cell Events: 4856 mean_circ: 0.942162
Ran for 192550 frames Cell Events: 4861 mean_circ: 0.94217
Ran for 193050 frames Cell Events: 4877 mean_circ: 0.942206
Ran for 193550 frames Cell Events: 4890 mean_circ: 0.942213
Ran for 194050 frames Cell Events: 4901 mean_circ: 0.942234
Ran for 194550 frames Cell Events: 4913 mean_circ: 0.942222
Ran for 195050 frames Cell Events: 4934 mean_circ: 0.942206
Ran for 195550 frames Cell Events: 4950 mean_circ: 0.942181
Ran for 196050 frames Cell Events: 4967 mean_circ: 0.942208
Ran for 197550 frames Cell Events: 5008 mean_circ: 0.942245
Ran for 198550 frames Cell Events: 5035 mean_circ: 0.942255
Ran for 199550 frames Cell Events: 5064 mean_circ: 0.942239
Ran for 200050 frames Cell Events: 5075 mean_circ: 0.942232
Ran for 200550 frames Cell Events: 5082 mean_circ: 0.942239
Ran for 201050 frames Cell Events: 5097 mean_circ: 0.942252
Ran for 202050 frames Cell Events: 5120 mean_circ: 0.942215
Ran for 203050 frames Cell Events: 5144 mean_circ: 0.942165
Ran for 203550 frames Cell Events: 5155 mean_circ: 0.942196
Ran for 204550 frames Cell Events: 5179 mean_circ: 0.942216
Ran for 205050 frames Cell Events: 5195 mean_circ: 0.942254
Ran for 205550 frames Cell Events: 5206 mean_circ: 0.942283
Ran for 206050 frames Cell Events: 5225 mean_circ: 0.942279
Ran for 206550 frames Cell Events: 5246 mean_circ: 0.942281
Ran for 207050 frames Cell Events: 5252 mean_circ: 0.94225
Ran for 207550 frames Cell Events: 5270 mean_circ: 0.942261
Ran for 208050 frames Cell Events: 5284 mean_circ: 0.942215
Ran for 208550 frames Cell Events: 5296 mean_circ: 0.942254
Ran for 209050 frames Cell Events: 5305 mean_circ: 0.942255
Ran for 210050 frames Cell Events: 5326 mean_circ: 0.942292
Ran for 211050 frames Cell Events: 5364 mean_circ: 0.9423
Ran for 211550 frames Cell Events: 5378 mean_circ: 0.942276
Ran for 212050 frames Cell Events: 5385 mean_circ: 0.942261
Ran for 212550 frames Cell Events: 5399 mean_circ: 0.942274
Ran for 213050 frames Cell Events: 5415 mean_circ: 0.94226
Ran for 213550 frames Cell Events: 5429 mean_circ: 0.942294
Ran for 214050 frames Cell Events: 5442 mean_circ: 0.942281
Ran for 214550 frames Cell Events: 5469 mean_circ: 0.942294
Ran for 215550 frames Cell Events: 5501 mean_circ: 0.942335
Ran for 216550 frames Cell Events: 5514 mean_circ: 0.942362
Ran for 217050 frames Cell Events: 5528 mean_circ: 0.942337
Ran for 217550 frames Cell Events: 5548 mean_circ: 0.942368
Ran for 218050 frames Cell Events: 5562 mean_circ: 0.94231
Ran for 218550 frames Cell Events: 5574 mean_circ: 0.942313
Ran for 219050 frames Cell Events: 5590 mean_circ: 0.942348
Ran for 219550 frames Cell Events: 5601 mean_circ: 0.942358
Ran for 220050 frames Cell Events: 5614 mean_circ: 0.942363
Ran for 220550 frames Cell Events: 5627 mean_circ: 0.942377
Ran for 221050 frames Cell Events: 5640 mean_circ: 0.942374
Ran for 221550 frames Cell Events: 5652 mean_circ: 0.94236
Ran for 222050 frames Cell Events: 5670 mean_circ: 0.942365
Ran for 222550 frames Cell Events: 5683 mean_circ: 0.942399
Ran for 223050 frames Cell Events: 5692 mean_circ: 0.942417
Ran for 223550 frames Cell Events: 5702 mean_circ: 0.942426
Ran for 224050 frames Cell Events: 5715 mean_circ: 0.942385
Ran for 224550 frames Cell Events: 5729 mean_circ: 0.942373
Ran for 225050 frames Cell Events: 5750 mean_circ: 0.942394
Ran for 226050 frames Cell Events: 5783 mean_circ: 0.942426
Ran for 226550 frames Cell Events: 5793 mean_circ: 0.942441
Ran for 227550 frames Cell Events: 5820 mean_circ: 0.942412
Ran for 228050 frames Cell Events: 5837 mean_circ: 0.942422
Ran for 228550 frames Cell Events: 5864 mean_circ: 0.942388
Ran for 229050 frames Cell Events: 5883 mean_circ: 0.942396
Ran for 229550 frames Cell Events: 5898 mean_circ: 0.942392
Ran for 230050 frames Cell Events: 5920 mean_circ: 0.942325
Ran for 230550 frames Cell Events: 5930 mean_circ: 0.942321
Ran for 232050 frames Cell Events: 5967 mean_circ: 0.942307
Ran for 232550 frames Cell Events: 5982 mean_circ: 0.942301
Ran for 233550 frames Cell Events: 6014 mean_circ: 0.942328
Ran for 234050 frames Cell Events: 6023 mean_circ: 0.942372
Ran for 234550 frames Cell Events: 6036 mean_circ: 0.94236
Ran for 235050 frames Cell Events: 6058 mean_circ: 0.942359
Ran for 235550 frames Cell Events: 6065 mean_circ: 0.942394
Ran for 236050 frames Cell Events: 6084 mean_circ: 0.942361
Ran for 236550 frames Cell Events: 6097 mean_circ: 0.94239
Ran for 237050 frames Cell Events: 6114 mean_circ: 0.942384
Ran for 238050 frames Cell Events: 6133 mean_circ: 0.942411
Ran for 239050 frames Cell Events: 6157 mean_circ: 0.94236
Ran for 239550 frames Cell Events: 6172 mean_circ: 0.942365
Ran for 240050 frames Cell Events: 6182 mean_circ: 0.942401
Ran for 240550 frames Cell Events: 6193 mean_circ: 0.942403
Ran for 241050 frames Cell Events: 6214 mean_circ: 0.942354
Ran for 241550 frames Cell Events: 6224 mean_circ: 0.942371
Ran for 242050 frames Cell Events: 6238 mean_circ: 0.942358
Ran for 242550 frames Cell Events: 6255 mean_circ: 0.942386
Ran for 243050 frames Cell Events: 6269 mean_circ: 0.942373
Ran for 243550 frames Cell Events: 6280 mean_circ: 0.942389
Ran for 244050 frames Cell Events: 6301 mean_circ: 0.942381
Ran for 245050 frames Cell Events: 6335 mean_circ: 0.942306
Ran for 245550 frames Cell Events: 6356 mean_circ: 0.942312
Ran for 246050 frames Cell Events: 6370 mean_circ: 0.942254
Ran for 247050 frames Cell Events: 6388 mean_circ: 0.942279
Ran for 247550 frames Cell Events: 6400 mean_circ: 0.942291
Ran for 248050 frames Cell Events: 6413 mean_circ: 0.942286
Ran for 248550 frames Cell Events: 6426 mean_circ: 0.942259
Ran for 249050 frames Cell Events: 6442 mean_circ: 0.942292
Ran for 249550 frames Cell Events: 6450 mean_circ: 0.942312
Ran for 250050 frames Cell Events: 6463 mean_circ: 0.942318
Ran for 250550 frames Cell Events: 6478 mean_circ: 0.942331
Ran for 251050 frames Cell Events: 6496 mean_circ: 0.942319
Ran for 251550 frames Cell Events: 6503 mean_circ: 0.942309
Ran for 252050 frames Cell Events: 6518 mean_circ: 0.942325
Ran for 252550 frames Cell Events: 6527 mean_circ: 0.942323
Ran for 253050 frames Cell Events: 6534 mean_circ: 0.942349
Ran for 254050 frames Cell Events: 6560 mean_circ: 0.94237
Ran for 254550 frames Cell Events: 6567 mean_circ: 0.94236
Ran for 256050 frames Cell Events: 6605 mean_circ: 0.942382
Ran for 256550 frames Cell Events: 6618 mean_circ: 0.94236
Ran for 257050 frames Cell Events: 6626 mean_circ: 0.942352
Ran for 257550 frames Cell Events: 6647 mean_circ: 0.942392
Ran for 258050 frames Cell Events: 6659 mean_circ: 0.942397
Ran for 258550 frames Cell Events: 6674 mean_circ: 0.942373
Ran for 259050 frames Cell Events: 6691 mean_circ: 0.942371
Ran for 259550 frames Cell Events: 6696 mean_circ: 0.942382
Ran for 260050 frames Cell Events: 6703 mean_circ: 0.942391
Ran for 260550 frames Cell Events: 6711 mean_circ: 0.942385
Ran for 261050 frames Cell Events: 6717 mean_circ: 0.942385
Ran for 261550 frames Cell Events: 6727 mean_circ: 0.942378
Ran for 262550 frames Cell Events: 6737 mean_circ: 0.942359
Ran for 263050 frames Cell Events: 6752 mean_circ: 0.942349
Ran for 263550 frames Cell Events: 6763 mean_circ: 0.942352
Ran for 264050 frames Cell Events: 6774 mean_circ: 0.942254
Ran for 264550 frames Cell Events: 6782 mean_circ: 0.94226
Ran for 265050 frames Cell Events: 6803 mean_circ: 0.942294
Ran for 265550 frames Cell Events: 6811 mean_circ: 0.942313
Ran for 266050 frames Cell Events: 6821 mean_circ: 0.94234
Ran for 267050 frames Cell Events: 6851 mean_circ: 0.942307
Ran for 268550 frames Cell Events: 6880 mean_circ: 0.942242
Ran for 269050 frames Cell Events: 6897 mean_circ: 0.942233
Ran for 269550 frames Cell Events: 6915 mean_circ: 0.942237
Ran for 270050 frames Cell Events: 6942 mean_circ: 0.94226
Ran for 271550 frames Cell Events: 7019 mean_circ: 0.942291
Ran for 272050 frames Cell Events: 7032 mean_circ: 0.942307
Ran for 272550 frames Cell Events: 7049 mean_circ: 0.942335
Ran for 273050 frames Cell Events: 7056 mean_circ: 0.942337
Ran for 273550 frames Cell Events: 7068 mean_circ: 0.942347
Ran for 275050 frames Cell Events: 7092 mean_circ: 0.942344
Ran for 276050 frames Cell Events: 7117 mean_circ: 0.942297
Ran for 276550 frames Cell Events: 7130 mean_circ: 0.9423
Ran for 277550 frames Cell Events: 7159 mean_circ: 0.942308
Ran for 278050 frames Cell Events: 7165 mean_circ: 0.942327
Ran for 278550 frames Cell Events: 7176 mean_circ: 0.94232
Ran for 279050 frames Cell Events: 7184 mean_circ: 0.942327
Ran for 279550 frames Cell Events: 7194 mean_circ: 0.942322
Ran for 280050 frames Cell Events: 7203 mean_circ: 0.942328
Ran for 280550 frames Cell Events: 7215 mean_circ: 0.942346
Ran for 281050 frames Cell Events: 7230 mean_circ: 0.942337
Ran for 281550 frames Cell Events: 7242 mean_circ: 0.942366
Ran for 282050 frames Cell Events: 7250 mean_circ: 0.942375
Ran for 283050 frames Cell Events: 7283 mean_circ: 0.942397
Ran for 283550 frames Cell Events: 7291 mean_circ: 0.942393
Ran for 284050 frames Cell Events: 7299 mean_circ: 0.94239
Ran for 284550 frames Cell Events: 7312 mean_circ: 0.942404
Ran for 285050 frames Cell Events: 7325 mean_circ: 0.942375
Ran for 285550 frames Cell Events: 7334 mean_circ: 0.942386
Ran for 287050 frames Cell Events: 7369 mean_circ: 0.942448
Ran for 287550 frames Cell Events: 7384 mean_circ: 0.942448
Ran for 288050 frames Cell Events: 7395 mean_circ: 0.942446
Ran for 288550 frames Cell Events: 7404 mean_circ: 0.942427
Ran for 289050 frames Cell Events: 7416 mean_circ: 0.942448
Ran for 289550 frames Cell Events: 7430 mean_circ: 0.94247
Ran for 290050 frames Cell Events: 7440 mean_circ: 0.942472
Ran for 290550 frames Cell Events: 7445 mean_circ: 0.942481
Ran for 291550 frames Cell Events: 7462 mean_circ: 0.942518
Ran for 292050 frames Cell Events: 7474 mean_circ: 0.942496
Ran for 292550 frames Cell Events: 7492 mean_circ: 0.9425
Ran for 293050 frames Cell Events: 7502 mean_circ: 0.942494
Ran for 293550 frames Cell Events: 7513 mean_circ: 0.942508
Ran for 294050 frames Cell Events: 7522 mean_circ: 0.942504
Ran for 295550 frames Cell Events: 7564 mean_circ: 0.942522
Ran for 296050 frames Cell Events: 7577 mean_circ: 0.942551
Ran for 296550 frames Cell Events: 7586 mean_circ: 0.942568
Ran for 297050 frames Cell Events: 7593 mean_circ: 0.942585
Ran for 297550 frames Cell Events: 7611 mean_circ: 0.942584
Ran for 298050 frames Cell Events: 7624 mean_circ: 0.942591
Ran for 298550 frames Cell Events: 7631 mean_circ: 0.942605
Ran for 299050 frames Cell Events: 7650 mean_circ: 0.942622
Ran for 299550 frames Cell Events: 7657 mean_circ: 0.942618
Ran for 300550 frames Cell Events: 7687 mean_circ: 0.942582
Ran for 301050 frames Cell Events: 7704 mean_circ: 0.942579
Ran for 301550 frames Cell Events: 7715 mean_circ: 0.942616
Ran for 302050 frames Cell Events: 7736 mean_circ: 0.94258
Ran for 302550 frames Cell Events: 7743 mean_circ: 0.942572
Ran for 303050 frames Cell Events: 7755 mean_circ: 0.942591
Ran for 303550 frames Cell Events: 7765 mean_circ: 0.942607
Ran for 304050 frames Cell Events: 7786 mean_circ: 0.942621
Ran for 304550 frames Cell Events: 7808 mean_circ: 0.942593
Ran for 305550 frames Cell Events: 7839 mean_circ: 0.942586
Ran for 306050 frames Cell Events: 7866 mean_circ: 0.942596
Ran for 307050 frames Cell Events: 7898 mean_circ: 0.942583
Ran for 307550 frames Cell Events: 7916 mean_circ: 0.942547
Ran for 308050 frames Cell Events: 7925 mean_circ: 0.942562
Ran for 308550 frames Cell Events: 7940 mean_circ: 0.942565
Ran for 310050 frames Cell Events: 7996 mean_circ: 0.942603
Ran for 310550 frames Cell Events: 8006 mean_circ: 0.942589
Ran for 311050 frames Cell Events: 8021 mean_circ: 0.942589
Ran for 311550 frames Cell Events: 8039 mean_circ: 0.942551
Ran for 312050 frames Cell Events: 8050 mean_circ: 0.942557
Ran for 313050 frames Cell Events: 8086 mean_circ: 0.94256
Ran for 313550 frames Cell Events: 8094 mean_circ: 0.942568
Ran for 314550 frames Cell Events: 8124 mean_circ: 0.942593
Ran for 315050 frames Cell Events: 8143 mean_circ: 0.942594
Ran for 315550 frames Cell Events: 8152 mean_circ: 0.942589
Ran for 316550 frames Cell Events: 8181 mean_circ: 0.94256
Ran for 317050 frames Cell Events: 8193 mean_circ: 0.942591
Ran for 317550 frames Cell Events: 8202 mean_circ: 0.942607
Ran for 318550 frames Cell Events: 8226 mean_circ: 0.942648
Ran for 320550 frames Cell Events: 8293 mean_circ: 0.942633
Ran for 321550 frames Cell Events: 8336 mean_circ: 0.942655
Ran for 322050 frames Cell Events: 8344 mean_circ: 0.942674
Ran for 322550 frames Cell Events: 8354 mean_circ: 0.942682
Ran for 323550 frames Cell Events: 8385 mean_circ: 0.942691
Ran for 324050 frames Cell Events: 8401 mean_circ: 0.942702
Ran for 324550 frames Cell Events: 8418 mean_circ: 0.942709
Ran for 325050 frames Cell Events: 8430 mean_circ: 0.942714
Ran for 326550 frames Cell Events: 8465 mean_circ: 0.942717
Ran for 327050 frames Cell Events: 8479 mean_circ: 0.942717
Ran for 327550 frames Cell Events: 8490 mean_circ: 0.942735
Ran for 328050 frames Cell Events: 8510 mean_circ: 0.942774
Ran for 329050 frames Cell Events: 8542 mean_circ: 0.942783
Ran for 329550 frames Cell Events: 8558 mean_circ: 0.942782
Ran for 330050 frames Cell Events: 8568 mean_circ: 0.9428
Ran for 330550 frames Cell Events: 8582 mean_circ: 0.942811
Ran for 331050 frames Cell Events: 8600 mean_circ: 0.942831
Ran for 331550 frames Cell Events: 8616 mean_circ: 0.942823
Ran for 332550 frames Cell Events: 8644 mean_circ: 0.942858
Ran for 333050 frames Cell Events: 8653 mean_circ: 0.942837
Ran for 333550 frames Cell Events: 8662 mean_circ: 0.942838
Ran for 334050 frames Cell Events: 8685 mean_circ: 0.94285
Ran for 334550 frames Cell Events: 8697 mean_circ: 0.942833
Ran for 336050 frames Cell Events: 8733 mean_circ: 0.942873
Ran for 337550 frames Cell Events: 8787 mean_circ: 0.942877
Ran for 339050 frames Cell Events: 8837 mean_circ: 0.942865
Ran for 339550 frames Cell Events: 8847 mean_circ: 0.942874
Ran for 340050 frames Cell Events: 8861 mean_circ: 0.942892
Ran for 340550 frames Cell Events: 8869 mean_circ: 0.942892
Ran for 341550 frames Cell Events: 8896 mean_circ: 0.942919
Ran for 342550 frames Cell Events: 8930 mean_circ: 0.94295
Ran for 343050 frames Cell Events: 8941 mean_circ: 0.942953
Ran for 343550 frames Cell Events: 8950 mean_circ: 0.94297
Ran for 344050 frames Cell Events: 8962 mean_circ: 0.942962
Ran for 344550 frames Cell Events: 8980 mean_circ: 0.942954
Ran for 345050 frames Cell Events: 8994 mean_circ: 0.942948
Ran for 346550 frames Cell Events: 9024 mean_circ: 0.942971
Ran for 347050 frames Cell Events: 9032 mean_circ: 0.94298
Ran for 347550 frames Cell Events: 9046 mean_circ: 0.942985
Ran for 348050 frames Cell Events: 9060 mean_circ: 0.942971
Ran for 348550 frames Cell Events: 9071 mean_circ: 0.942952
Ran for 349050 frames Cell Events: 9081 mean_circ: 0.942967
Ran for 349550 frames Cell Events: 9090 mean_circ: 0.942963
Ran for 350050 frames Cell Events: 9105 mean_circ: 0.94298
Ran for 351550 frames Cell Events: 9143 mean_circ: 0.942976
Ran for 353050 frames Cell Events: 9197 mean_circ: 0.94293
Ran for 353550 frames Cell Events: 9205 mean_circ: 0.942933
Ran for 354050 frames Cell Events: 9215 mean_circ: 0.942931
Ran for 354550 frames Cell Events: 9225 mean_circ: 0.94295
Ran for 355050 frames Cell Events: 9250 mean_circ: 0.942923
Ran for 355550 frames Cell Events: 9259 mean_circ: 0.942909
Ran for 356550 frames Cell Events: 9280 mean_circ: 0.94289
Ran for 357550 frames Cell Events: 9324 mean_circ: 0.942874
Ran for 358050 frames Cell Events: 9335 mean_circ: 0.942878
Ran for 358550 frames Cell Events: 9346 mean_circ: 0.942886
Ran for 359550 frames Cell Events: 9375 mean_circ: 0.942895
Ran for 360550 frames Cell Events: 9397 mean_circ: 0.942903
Ran for 361050 frames Cell Events: 9413 mean_circ: 0.942913
Ran for 362050 frames Cell Events: 9436 mean_circ: 0.942943
Ran for 362550 frames Cell Events: 9448 mean_circ: 0.942954
Ran for 363550 frames Cell Events: 9469 mean_circ: 0.942928
Ran for 365050 frames Cell Events: 9510 mean_circ: 0.942893
Ran for 366050 frames Cell Events: 9531 mean_circ: 0.942905
Ran for 367050 frames Cell Events: 9550 mean_circ: 0.942934
Ran for 367550 frames Cell Events: 9563 mean_circ: 0.942924
Ran for 368050 frames Cell Events: 9575 mean_circ: 0.942908
Ran for 368550 frames Cell Events: 9586 mean_circ: 0.942898
Ran for 369050 frames Cell Events: 9601 mean_circ: 0.942904
Ran for 370050 frames Cell Events: 9630 mean_circ: 0.942915
Ran for 370550 frames Cell Events: 9644 mean_circ: 0.942868
Ran for 371050 frames Cell Events: 9654 mean_circ: 0.942865
Ran for 371550 frames Cell Events: 9659 mean_circ: 0.942857
Ran for 372550 frames Cell Events: 9686 mean_circ: 0.942842
Ran for 373050 frames Cell Events: 9702 mean_circ: 0.942828
Ran for 374050 frames Cell Events: 9728 mean_circ: 0.942785
Ran for 374550 frames Cell Events: 9737 mean_circ: 0.942804
Ran for 375550 frames Cell Events: 9755 mean_circ: 0.942787
Ran for 376050 frames Cell Events: 9768 mean_circ: 0.942805
Ran for 377050 frames Cell Events: 9789 mean_circ: 0.942802
Ran for 377550 frames Cell Events: 9803 mean_circ: 0.942813
Ran for 378050 frames Cell Events: 9816 mean_circ: 0.942827
End this measurment..
Stopping time: 7.27838e+008
****************************************
Measurement finished
Mean Circularitiy: 0.942832
Mean Area: 600.491
Mean FL-1 intensity: 3564.37
Mean FL-2 intensity: 4357.17
Mean FL-3 intensity: 0
frames processed: 376009
Total Time: 189317ms
Number of Runs (new bg img) 0
Frames collected: 378505
Skipped frames: 116827
Rescued Frames: 4008864
Samples DAQ: 94626363
Samples written: 189252674
Samples per Channel: 94626337
FPS: 1999.32
Samples per second: 499830
Expected samples/s: 500000
Events: 9824
Events per second: 51.8918
jumped back (PMT): 6197
#Frames read, frequency
# 0 frames :518109
# 1 frames :214959
# 2 frames :6106
# 3 frames :2836
# 4 frames :1681
# 5 frames :858
# 6 frames :1433
# 7 frames :2473
# 8 frames :1822
# 9 frames :1155
# 10 frames :826
# 11 frames :1060
# 12 frames :831
# 13 frames :614
# 14 frames :458
# 15 frames :312
# 16 frames :259
# 17 frames :194
# 18 frames :161
# 19 frames :145
# 20 frames :115
# 21 frames :101
# 22 frames :70
# 23 frames :68
# 24 frames :55
# 25 frames :36
# 26 frames :37
# 27 frames :25
# 28 frames :23
# 29 frames :16
# 30 frames :14
# 31 frames :17
# 32 frames :12
# 33 frames :4
# 34 frames :4
# 35 frames :14
# 36 frames :5
# 37 frames :9
# 38 frames :4
# 39 frames :2
# 40 frames :2
# 41 frames :6
# 42 frames :3
# 43 frames :1
# 44 frames :2
# 45 frames :1
# 46 frames :3
# 47 frames :4
# 49 frames :1
# 50 frames :1
# 51 frames :1
# 56 frames :1
# 59 frames :2
# 74 frames :1
# 89 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.2039
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0