Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-09_20.09.37
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "295eee994ced359b7a159fafa134a66a",
"name": "M1_20170523_1902_dsRNA_H6_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-09",
"time": "18:09:57"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8051 (max 8052) in '8051'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.165
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 7.29571e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 25 mean_circ: 0.938333
Ran for 2050 frames Cell Events: 64 mean_circ: 0.944154
Ran for 2550 frames Cell Events: 77 mean_circ: 0.944408
Ran for 4550 frames Cell Events: 166 mean_circ: 0.944552
Ran for 5050 frames Cell Events: 184 mean_circ: 0.946029
Ran for 5550 frames Cell Events: 201 mean_circ: 0.945961
Ran for 6050 frames Cell Events: 219 mean_circ: 0.94644
Ran for 7050 frames Cell Events: 258 mean_circ: 0.946433
Ran for 8050 frames Cell Events: 281 mean_circ: 0.947411
Ran for 10050 frames Cell Events: 323 mean_circ: 0.948349
Ran for 10550 frames Cell Events: 330 mean_circ: 0.949181
Ran for 11050 frames Cell Events: 367 mean_circ: 0.949099
Ran for 11550 frames Cell Events: 396 mean_circ: 0.949099
Ran for 12550 frames Cell Events: 474 mean_circ: 0.948153
Ran for 13050 frames Cell Events: 496 mean_circ: 0.947485
Ran for 13550 frames Cell Events: 509 mean_circ: 0.947287
Ran for 14550 frames Cell Events: 541 mean_circ: 0.947055
Ran for 16050 frames Cell Events: 590 mean_circ: 0.947781
Ran for 17550 frames Cell Events: 624 mean_circ: 0.947923
Ran for 18050 frames Cell Events: 641 mean_circ: 0.947946
Ran for 18550 frames Cell Events: 659 mean_circ: 0.94815
Ran for 19050 frames Cell Events: 678 mean_circ: 0.948204
Ran for 20050 frames Cell Events: 719 mean_circ: 0.94826
Ran for 20550 frames Cell Events: 737 mean_circ: 0.948149
Ran for 21550 frames Cell Events: 779 mean_circ: 0.948341
Ran for 22050 frames Cell Events: 795 mean_circ: 0.948373
Ran for 23550 frames Cell Events: 844 mean_circ: 0.948805
Ran for 24050 frames Cell Events: 852 mean_circ: 0.948676
Ran for 24550 frames Cell Events: 862 mean_circ: 0.948735
Ran for 25050 frames Cell Events: 872 mean_circ: 0.948706
Ran for 25550 frames Cell Events: 889 mean_circ: 0.948785
Ran for 26050 frames Cell Events: 908 mean_circ: 0.948926
Ran for 26550 frames Cell Events: 937 mean_circ: 0.949088
Ran for 27550 frames Cell Events: 986 mean_circ: 0.949054
Ran for 28050 frames Cell Events: 1002 mean_circ: 0.949011
Ran for 28550 frames Cell Events: 1013 mean_circ: 0.948941
Ran for 29050 frames Cell Events: 1022 mean_circ: 0.948979
Ran for 29550 frames Cell Events: 1039 mean_circ: 0.948933
Ran for 30050 frames Cell Events: 1054 mean_circ: 0.948964
Ran for 31050 frames Cell Events: 1103 mean_circ: 0.949014
Ran for 31550 frames Cell Events: 1117 mean_circ: 0.949154
Ran for 32050 frames Cell Events: 1129 mean_circ: 0.949158
Ran for 32550 frames Cell Events: 1141 mean_circ: 0.94911
Ran for 33050 frames Cell Events: 1165 mean_circ: 0.949367
Ran for 33550 frames Cell Events: 1180 mean_circ: 0.949273
Ran for 34050 frames Cell Events: 1193 mean_circ: 0.949015
Ran for 34550 frames Cell Events: 1212 mean_circ: 0.949152
Ran for 35050 frames Cell Events: 1233 mean_circ: 0.949177
Ran for 35550 frames Cell Events: 1268 mean_circ: 0.949247
Ran for 36550 frames Cell Events: 1308 mean_circ: 0.949239
Ran for 37550 frames Cell Events: 1351 mean_circ: 0.949146
Ran for 38050 frames Cell Events: 1374 mean_circ: 0.949087
Ran for 40050 frames Cell Events: 1449 mean_circ: 0.949515
Ran for 41050 frames Cell Events: 1482 mean_circ: 0.949535
Ran for 41550 frames Cell Events: 1499 mean_circ: 0.949564
Ran for 42550 frames Cell Events: 1541 mean_circ: 0.949432
Ran for 43550 frames Cell Events: 1593 mean_circ: 0.949501
Ran for 44050 frames Cell Events: 1606 mean_circ: 0.949434
Ran for 44550 frames Cell Events: 1621 mean_circ: 0.949405
Ran for 46050 frames Cell Events: 1675 mean_circ: 0.949438
Ran for 46550 frames Cell Events: 1690 mean_circ: 0.949484
Ran for 47550 frames Cell Events: 1730 mean_circ: 0.949565
Ran for 48050 frames Cell Events: 1742 mean_circ: 0.9497
Ran for 48550 frames Cell Events: 1761 mean_circ: 0.949723
Ran for 49050 frames Cell Events: 1778 mean_circ: 0.94971
Ran for 49550 frames Cell Events: 1790 mean_circ: 0.949717
Ran for 50050 frames Cell Events: 1804 mean_circ: 0.949743
Ran for 50550 frames Cell Events: 1824 mean_circ: 0.949564
Ran for 51050 frames Cell Events: 1838 mean_circ: 0.949485
Ran for 51550 frames Cell Events: 1857 mean_circ: 0.949396
Ran for 52050 frames Cell Events: 1871 mean_circ: 0.949326
Ran for 52550 frames Cell Events: 1886 mean_circ: 0.949308
Ran for 54050 frames Cell Events: 1935 mean_circ: 0.949274
Ran for 54550 frames Cell Events: 1948 mean_circ: 0.949342
Ran for 55050 frames Cell Events: 1962 mean_circ: 0.949426
Ran for 56050 frames Cell Events: 2005 mean_circ: 0.94946
Ran for 56550 frames Cell Events: 2025 mean_circ: 0.949414
Ran for 57050 frames Cell Events: 2043 mean_circ: 0.949485
Ran for 57550 frames Cell Events: 2063 mean_circ: 0.949458
Ran for 58050 frames Cell Events: 2080 mean_circ: 0.949483
Ran for 58550 frames Cell Events: 2097 mean_circ: 0.949645
Ran for 59050 frames Cell Events: 2114 mean_circ: 0.949697
Ran for 59550 frames Cell Events: 2124 mean_circ: 0.949761
Ran for 60050 frames Cell Events: 2140 mean_circ: 0.949665
Ran for 60550 frames Cell Events: 2153 mean_circ: 0.949678
Ran for 61050 frames Cell Events: 2170 mean_circ: 0.949732
Ran for 61550 frames Cell Events: 2184 mean_circ: 0.949741
Ran for 62050 frames Cell Events: 2198 mean_circ: 0.949738
Ran for 62550 frames Cell Events: 2205 mean_circ: 0.949686
Ran for 63050 frames Cell Events: 2227 mean_circ: 0.949672
Ran for 63550 frames Cell Events: 2243 mean_circ: 0.949735
Ran for 64050 frames Cell Events: 2254 mean_circ: 0.949812
Ran for 64550 frames Cell Events: 2272 mean_circ: 0.94984
Ran for 65050 frames Cell Events: 2284 mean_circ: 0.949914
Ran for 66050 frames Cell Events: 2307 mean_circ: 0.949931
Ran for 66550 frames Cell Events: 2320 mean_circ: 0.949973
Ran for 67550 frames Cell Events: 2354 mean_circ: 0.950059
Ran for 68050 frames Cell Events: 2372 mean_circ: 0.950201
Ran for 68550 frames Cell Events: 2386 mean_circ: 0.950205
Ran for 70050 frames Cell Events: 2445 mean_circ: 0.949832
Ran for 70550 frames Cell Events: 2467 mean_circ: 0.949931
Ran for 71050 frames Cell Events: 2482 mean_circ: 0.950009
Ran for 71550 frames Cell Events: 2494 mean_circ: 0.950027
Ran for 72050 frames Cell Events: 2510 mean_circ: 0.950043
Ran for 72550 frames Cell Events: 2527 mean_circ: 0.950062
Ran for 73050 frames Cell Events: 2545 mean_circ: 0.95008
Ran for 73550 frames Cell Events: 2558 mean_circ: 0.950051
Ran for 74550 frames Cell Events: 2591 mean_circ: 0.950001
Ran for 75550 frames Cell Events: 2637 mean_circ: 0.950085
Ran for 76550 frames Cell Events: 2683 mean_circ: 0.950028
Ran for 77050 frames Cell Events: 2698 mean_circ: 0.950109
Ran for 77550 frames Cell Events: 2710 mean_circ: 0.950052
Ran for 78050 frames Cell Events: 2720 mean_circ: 0.950069
Ran for 78550 frames Cell Events: 2738 mean_circ: 0.950043
Ran for 79050 frames Cell Events: 2750 mean_circ: 0.949973
Ran for 80550 frames Cell Events: 2802 mean_circ: 0.950049
Ran for 81050 frames Cell Events: 2818 mean_circ: 0.950087
Ran for 81550 frames Cell Events: 2833 mean_circ: 0.949976
Ran for 82550 frames Cell Events: 2888 mean_circ: 0.949972
Ran for 83550 frames Cell Events: 2919 mean_circ: 0.949902
Ran for 84050 frames Cell Events: 2935 mean_circ: 0.949876
Ran for 84550 frames Cell Events: 2952 mean_circ: 0.949879
Ran for 85050 frames Cell Events: 2968 mean_circ: 0.94989
Ran for 85550 frames Cell Events: 2991 mean_circ: 0.949914
Ran for 86550 frames Cell Events: 3040 mean_circ: 0.950025
Ran for 87050 frames Cell Events: 3076 mean_circ: 0.950023
Ran for 87550 frames Cell Events: 3098 mean_circ: 0.94995
Ran for 88050 frames Cell Events: 3130 mean_circ: 0.949965
Ran for 88550 frames Cell Events: 3146 mean_circ: 0.949926
Ran for 89050 frames Cell Events: 3167 mean_circ: 0.949871
Ran for 89550 frames Cell Events: 3185 mean_circ: 0.949924
Ran for 90550 frames Cell Events: 3204 mean_circ: 0.950002
Ran for 91050 frames Cell Events: 3214 mean_circ: 0.949957
Ran for 91550 frames Cell Events: 3229 mean_circ: 0.949994
Ran for 92050 frames Cell Events: 3244 mean_circ: 0.949943
Ran for 92550 frames Cell Events: 3257 mean_circ: 0.949922
Ran for 93050 frames Cell Events: 3283 mean_circ: 0.949933
Ran for 94050 frames Cell Events: 3319 mean_circ: 0.949927
Ran for 94550 frames Cell Events: 3335 mean_circ: 0.949982
Ran for 96050 frames Cell Events: 3388 mean_circ: 0.950137
Ran for 96550 frames Cell Events: 3404 mean_circ: 0.950104
Ran for 97550 frames Cell Events: 3445 mean_circ: 0.950021
Ran for 98050 frames Cell Events: 3458 mean_circ: 0.950014
Ran for 98550 frames Cell Events: 3473 mean_circ: 0.950027
Ran for 99050 frames Cell Events: 3492 mean_circ: 0.950056
Ran for 99550 frames Cell Events: 3515 mean_circ: 0.950099
Ran for 100050 frames Cell Events: 3529 mean_circ: 0.95007
Ran for 100550 frames Cell Events: 3547 mean_circ: 0.950015
Ran for 101050 frames Cell Events: 3569 mean_circ: 0.949988
Ran for 102050 frames Cell Events: 3614 mean_circ: 0.950042
Ran for 102550 frames Cell Events: 3622 mean_circ: 0.949998
Ran for 103050 frames Cell Events: 3643 mean_circ: 0.949935
Ran for 104050 frames Cell Events: 3685 mean_circ: 0.949914
Ran for 104550 frames Cell Events: 3701 mean_circ: 0.949877
Ran for 105050 frames Cell Events: 3714 mean_circ: 0.94987
Ran for 105550 frames Cell Events: 3728 mean_circ: 0.94987
Ran for 106050 frames Cell Events: 3744 mean_circ: 0.949892
Ran for 107050 frames Cell Events: 3773 mean_circ: 0.949869
Ran for 107550 frames Cell Events: 3787 mean_circ: 0.949852
Ran for 108050 frames Cell Events: 3796 mean_circ: 0.949879
Ran for 108550 frames Cell Events: 3808 mean_circ: 0.949907
Ran for 109550 frames Cell Events: 3851 mean_circ: 0.950015
Ran for 110050 frames Cell Events: 3867 mean_circ: 0.950028
Ran for 110550 frames Cell Events: 3883 mean_circ: 0.950019
Ran for 111050 frames Cell Events: 3907 mean_circ: 0.949962
Ran for 111550 frames Cell Events: 3919 mean_circ: 0.949988
Ran for 112050 frames Cell Events: 3957 mean_circ: 0.949989
Ran for 113050 frames Cell Events: 3993 mean_circ: 0.949878
Ran for 114050 frames Cell Events: 4030 mean_circ: 0.949765
Ran for 114550 frames Cell Events: 4043 mean_circ: 0.94973
Ran for 115550 frames Cell Events: 4079 mean_circ: 0.949683
Ran for 116050 frames Cell Events: 4101 mean_circ: 0.949704
Ran for 117550 frames Cell Events: 4128 mean_circ: 0.949626
Ran for 118050 frames Cell Events: 4151 mean_circ: 0.94949
Ran for 118550 frames Cell Events: 4158 mean_circ: 0.949517
Ran for 120050 frames Cell Events: 4215 mean_circ: 0.94943
Ran for 120550 frames Cell Events: 4232 mean_circ: 0.949389
Ran for 121550 frames Cell Events: 4268 mean_circ: 0.949311
Ran for 122050 frames Cell Events: 4278 mean_circ: 0.949355
Ran for 122550 frames Cell Events: 4290 mean_circ: 0.949348
Ran for 123550 frames Cell Events: 4314 mean_circ: 0.949347
Ran for 125050 frames Cell Events: 4368 mean_circ: 0.949391
Ran for 125550 frames Cell Events: 4383 mean_circ: 0.949387
Ran for 126050 frames Cell Events: 4403 mean_circ: 0.949347
Ran for 127050 frames Cell Events: 4443 mean_circ: 0.949355
Ran for 127550 frames Cell Events: 4456 mean_circ: 0.94938
Ran for 129050 frames Cell Events: 4498 mean_circ: 0.949423
Ran for 129550 frames Cell Events: 4515 mean_circ: 0.949418
Ran for 130050 frames Cell Events: 4534 mean_circ: 0.949412
Ran for 130550 frames Cell Events: 4558 mean_circ: 0.949392
Ran for 131050 frames Cell Events: 4572 mean_circ: 0.94941
Ran for 131550 frames Cell Events: 4585 mean_circ: 0.949423
Ran for 132550 frames Cell Events: 4612 mean_circ: 0.949472
Ran for 133050 frames Cell Events: 4630 mean_circ: 0.949509
Ran for 134050 frames Cell Events: 4665 mean_circ: 0.94952
Ran for 134550 frames Cell Events: 4680 mean_circ: 0.949536
Ran for 135050 frames Cell Events: 4691 mean_circ: 0.949535
Ran for 135550 frames Cell Events: 4721 mean_circ: 0.949499
Ran for 136550 frames Cell Events: 4744 mean_circ: 0.949505
Ran for 137050 frames Cell Events: 4760 mean_circ: 0.949489
Ran for 137550 frames Cell Events: 4774 mean_circ: 0.949501
Ran for 138550 frames Cell Events: 4805 mean_circ: 0.949508
Ran for 139050 frames Cell Events: 4819 mean_circ: 0.949493
Ran for 139550 frames Cell Events: 4833 mean_circ: 0.94953
Ran for 140050 frames Cell Events: 4855 mean_circ: 0.949528
Ran for 140550 frames Cell Events: 4875 mean_circ: 0.949513
Ran for 141550 frames Cell Events: 4913 mean_circ: 0.949476
Ran for 142550 frames Cell Events: 4939 mean_circ: 0.949376
Ran for 143550 frames Cell Events: 4967 mean_circ: 0.949391
Ran for 145050 frames Cell Events: 5016 mean_circ: 0.949425
Ran for 147050 frames Cell Events: 5088 mean_circ: 0.949502
Ran for 148050 frames Cell Events: 5114 mean_circ: 0.949543
Ran for 148550 frames Cell Events: 5141 mean_circ: 0.949514
Ran for 149050 frames Cell Events: 5163 mean_circ: 0.949566
Ran for 151050 frames Cell Events: 5255 mean_circ: 0.949492
Ran for 152550 frames Cell Events: 5342 mean_circ: 0.949574
Ran for 153550 frames Cell Events: 5383 mean_circ: 0.94963
Ran for 154050 frames Cell Events: 5400 mean_circ: 0.949642
Ran for 155050 frames Cell Events: 5447 mean_circ: 0.949693
Ran for 156050 frames Cell Events: 5477 mean_circ: 0.949716
Ran for 156550 frames Cell Events: 5490 mean_circ: 0.949666
Ran for 157050 frames Cell Events: 5517 mean_circ: 0.949698
Ran for 158550 frames Cell Events: 5573 mean_circ: 0.949677
Ran for 159050 frames Cell Events: 5593 mean_circ: 0.949623
Ran for 159550 frames Cell Events: 5609 mean_circ: 0.94961
Ran for 160550 frames Cell Events: 5648 mean_circ: 0.949562
Ran for 162050 frames Cell Events: 5712 mean_circ: 0.949537
Ran for 162550 frames Cell Events: 5723 mean_circ: 0.949472
Ran for 163050 frames Cell Events: 5737 mean_circ: 0.949504
Ran for 163550 frames Cell Events: 5750 mean_circ: 0.949505
Ran for 164050 frames Cell Events: 5766 mean_circ: 0.949516
Ran for 164550 frames Cell Events: 5784 mean_circ: 0.949521
Ran for 165050 frames Cell Events: 5807 mean_circ: 0.949524
Ran for 165550 frames Cell Events: 5841 mean_circ: 0.94954
Ran for 166050 frames Cell Events: 5860 mean_circ: 0.94954
Ran for 167550 frames Cell Events: 5920 mean_circ: 0.949563
Ran for 168050 frames Cell Events: 5939 mean_circ: 0.949579
Ran for 168550 frames Cell Events: 5957 mean_circ: 0.949592
Ran for 169050 frames Cell Events: 5974 mean_circ: 0.949614
Ran for 169550 frames Cell Events: 5985 mean_circ: 0.949625
Ran for 170550 frames Cell Events: 6015 mean_circ: 0.94966
Ran for 171050 frames Cell Events: 6031 mean_circ: 0.949657
Ran for 172550 frames Cell Events: 6084 mean_circ: 0.949687
Ran for 173050 frames Cell Events: 6101 mean_circ: 0.949704
Ran for 173550 frames Cell Events: 6124 mean_circ: 0.94972
Ran for 174050 frames Cell Events: 6142 mean_circ: 0.949719
Ran for 174550 frames Cell Events: 6161 mean_circ: 0.949726
Ran for 176050 frames Cell Events: 6222 mean_circ: 0.949767
Ran for 176550 frames Cell Events: 6241 mean_circ: 0.949768
Ran for 177050 frames Cell Events: 6257 mean_circ: 0.949755
Ran for 177550 frames Cell Events: 6276 mean_circ: 0.949792
Ran for 178550 frames Cell Events: 6308 mean_circ: 0.949836
Ran for 179050 frames Cell Events: 6330 mean_circ: 0.949839
Ran for 181550 frames Cell Events: 6461 mean_circ: 0.949906
Ran for 183050 frames Cell Events: 6497 mean_circ: 0.949925
Ran for 183550 frames Cell Events: 6514 mean_circ: 0.94991
Ran for 186550 frames Cell Events: 6636 mean_circ: 0.949944
Ran for 188550 frames Cell Events: 6695 mean_circ: 0.949839
Ran for 189550 frames Cell Events: 6735 mean_circ: 0.949883
Ran for 190550 frames Cell Events: 6771 mean_circ: 0.949919
Ran for 191550 frames Cell Events: 6798 mean_circ: 0.949921
Ran for 192050 frames Cell Events: 6819 mean_circ: 0.949914
Ran for 192550 frames Cell Events: 6832 mean_circ: 0.94988
Ran for 193050 frames Cell Events: 6848 mean_circ: 0.949871
Ran for 194050 frames Cell Events: 6883 mean_circ: 0.949868
Ran for 194550 frames Cell Events: 6906 mean_circ: 0.949831
Ran for 195050 frames Cell Events: 6925 mean_circ: 0.949871
Ran for 196050 frames Cell Events: 6976 mean_circ: 0.949867
Ran for 196550 frames Cell Events: 6987 mean_circ: 0.949885
Ran for 197550 frames Cell Events: 7030 mean_circ: 0.949867
Ran for 198050 frames Cell Events: 7045 mean_circ: 0.949862
Ran for 198550 frames Cell Events: 7069 mean_circ: 0.949844
Ran for 199050 frames Cell Events: 7087 mean_circ: 0.949895
Ran for 199550 frames Cell Events: 7099 mean_circ: 0.949893
Ran for 200550 frames Cell Events: 7135 mean_circ: 0.949864
Ran for 201050 frames Cell Events: 7160 mean_circ: 0.949898
Ran for 201550 frames Cell Events: 7168 mean_circ: 0.949899
Ran for 202050 frames Cell Events: 7182 mean_circ: 0.949902
Ran for 202550 frames Cell Events: 7206 mean_circ: 0.9499
Ran for 203050 frames Cell Events: 7228 mean_circ: 0.949855
Ran for 203550 frames Cell Events: 7243 mean_circ: 0.949859
Ran for 204050 frames Cell Events: 7255 mean_circ: 0.949845
Ran for 204550 frames Cell Events: 7273 mean_circ: 0.949828
Ran for 206550 frames Cell Events: 7346 mean_circ: 0.949917
Ran for 207050 frames Cell Events: 7372 mean_circ: 0.949949
Ran for 208550 frames Cell Events: 7423 mean_circ: 0.949923
Ran for 209050 frames Cell Events: 7438 mean_circ: 0.949963
Ran for 210050 frames Cell Events: 7461 mean_circ: 0.949978
Ran for 210550 frames Cell Events: 7470 mean_circ: 0.949976
Ran for 211050 frames Cell Events: 7482 mean_circ: 0.949965
Ran for 212050 frames Cell Events: 7521 mean_circ: 0.949972
Ran for 213550 frames Cell Events: 7567 mean_circ: 0.950004
Ran for 214050 frames Cell Events: 7581 mean_circ: 0.95002
Ran for 214550 frames Cell Events: 7616 mean_circ: 0.95002
Ran for 215050 frames Cell Events: 7625 mean_circ: 0.950085
Ran for 215550 frames Cell Events: 7636 mean_circ: 0.950073
Ran for 216050 frames Cell Events: 7650 mean_circ: 0.950086
Ran for 216550 frames Cell Events: 7665 mean_circ: 0.950077
Ran for 218050 frames Cell Events: 7726 mean_circ: 0.950046
Ran for 218550 frames Cell Events: 7741 mean_circ: 0.950039
Ran for 219550 frames Cell Events: 7777 mean_circ: 0.95007
Ran for 222050 frames Cell Events: 7891 mean_circ: 0.950055
Ran for 223050 frames Cell Events: 7933 mean_circ: 0.950082
Ran for 223550 frames Cell Events: 7946 mean_circ: 0.950054
Ran for 224050 frames Cell Events: 7971 mean_circ: 0.950096
Ran for 224550 frames Cell Events: 7983 mean_circ: 0.95012
Ran for 225050 frames Cell Events: 7999 mean_circ: 0.950139
Ran for 225550 frames Cell Events: 8023 mean_circ: 0.950124
End this measurment..
Stopping time: 7.29684e+008
****************************************
Measurement finished
Mean Circularitiy: 0.95012
Mean Area: 593.371
Mean FL-1 intensity: 3677.62
Mean FL-2 intensity: 4394.78
Mean FL-3 intensity: 0
frames processed: 223260
Total Time: 113038ms
Number of Runs (new bg img) 0
Frames collected: 225946
Skipped frames: 133799
Rescued Frames: 4338049
Samples DAQ: 56486440
Samples written: 112972576
Samples per Channel: 56486288
FPS: 1998.85
Samples per second: 499710
Expected samples/s: 500000
Events: 8052
Events per second: 71.2326
jumped back (PMT): 4646
#Frames read, frequency
# 0 frames :319077
# 1 frames :116680
# 2 frames :4470
# 3 frames :1645
# 4 frames :815
# 5 frames :416
# 6 frames :1913
# 7 frames :1754
# 8 frames :1330
# 9 frames :716
# 10 frames :502
# 11 frames :396
# 12 frames :389
# 13 frames :271
# 14 frames :270
# 15 frames :197
# 16 frames :187
# 17 frames :136
# 18 frames :110
# 19 frames :68
# 20 frames :67
# 21 frames :51
# 22 frames :49
# 23 frames :40
# 24 frames :41
# 25 frames :35
# 26 frames :18
# 27 frames :23
# 28 frames :24
# 29 frames :11
# 30 frames :21
# 31 frames :13
# 32 frames :11
# 33 frames :10
# 34 frames :11
# 35 frames :4
# 36 frames :11
# 37 frames :2
# 38 frames :9
# 39 frames :6
# 40 frames :8
# 41 frames :6
# 42 frames :3
# 43 frames :7
# 44 frames :2
# 45 frames :4
# 46 frames :4
# 47 frames :5
# 48 frames :2
# 49 frames :2
# 50 frames :3
# 51 frames :3
# 52 frames :2
# 53 frames :1
# 54 frames :3
# 56 frames :2
# 61 frames :1
# 62 frames :2
# 64 frames :1
# 65 frames :1
# 67 frames :1
# 68 frames :1
# 70 frames :1
# 72 frames :1
# 74 frames :1
# 80 frames :1
# 81 frames :1
# 85 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.165
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0