Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_11.28.49
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "95632b5ea05764ae7b1d8b05fcf94cca",
"name": "M1_20170530_1403_dsRNA_I5_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "09:29:14"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 9285 (max 9286) in '9285'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.4606
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.31644e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 1 mean_circ: 0.941726
Ran for 1050 frames Cell Events: 23 mean_circ: 0.930548
Ran for 1550 frames Cell Events: 31 mean_circ: 0.928491
Ran for 2550 frames Cell Events: 63 mean_circ: 0.929272
Ran for 3050 frames Cell Events: 83 mean_circ: 0.933051
Ran for 4050 frames Cell Events: 114 mean_circ: 0.931571
Ran for 4550 frames Cell Events: 128 mean_circ: 0.930888
Ran for 5050 frames Cell Events: 134 mean_circ: 0.930218
Ran for 5550 frames Cell Events: 157 mean_circ: 0.930753
Ran for 6050 frames Cell Events: 174 mean_circ: 0.930608
Ran for 6550 frames Cell Events: 195 mean_circ: 0.930962
Ran for 7550 frames Cell Events: 229 mean_circ: 0.931995
Ran for 8050 frames Cell Events: 242 mean_circ: 0.932371
Ran for 9050 frames Cell Events: 278 mean_circ: 0.93311
Ran for 10550 frames Cell Events: 329 mean_circ: 0.932539
Ran for 11550 frames Cell Events: 363 mean_circ: 0.933319
Ran for 12050 frames Cell Events: 382 mean_circ: 0.933766
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Ran for 13550 frames Cell Events: 438 mean_circ: 0.933185
Ran for 14550 frames Cell Events: 473 mean_circ: 0.933652
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Ran for 16050 frames Cell Events: 523 mean_circ: 0.93337
Ran for 17050 frames Cell Events: 545 mean_circ: 0.933548
Ran for 19050 frames Cell Events: 596 mean_circ: 0.933131
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Ran for 64050 frames Cell Events: 1953 mean_circ: 0.93262
Ran for 64550 frames Cell Events: 1965 mean_circ: 0.932453
Ran for 65050 frames Cell Events: 1987 mean_circ: 0.932494
Ran for 65550 frames Cell Events: 1998 mean_circ: 0.932346
Ran for 66050 frames Cell Events: 2016 mean_circ: 0.932468
Ran for 66550 frames Cell Events: 2030 mean_circ: 0.932406
Ran for 67050 frames Cell Events: 2050 mean_circ: 0.932426
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Ran for 69050 frames Cell Events: 2121 mean_circ: 0.932576
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Ran for 72050 frames Cell Events: 2209 mean_circ: 0.932675
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Ran for 73550 frames Cell Events: 2258 mean_circ: 0.932621
Ran for 74050 frames Cell Events: 2267 mean_circ: 0.932667
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Ran for 75050 frames Cell Events: 2295 mean_circ: 0.932733
Ran for 75550 frames Cell Events: 2310 mean_circ: 0.93263
Ran for 76050 frames Cell Events: 2330 mean_circ: 0.93262
Ran for 76550 frames Cell Events: 2347 mean_circ: 0.932571
Ran for 77050 frames Cell Events: 2360 mean_circ: 0.932534
Ran for 77550 frames Cell Events: 2384 mean_circ: 0.93266
Ran for 78550 frames Cell Events: 2422 mean_circ: 0.932534
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Ran for 79550 frames Cell Events: 2457 mean_circ: 0.932693
Ran for 80050 frames Cell Events: 2479 mean_circ: 0.932627
Ran for 81050 frames Cell Events: 2503 mean_circ: 0.932602
Ran for 82050 frames Cell Events: 2523 mean_circ: 0.932512
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Ran for 84550 frames Cell Events: 2598 mean_circ: 0.93231
Ran for 85550 frames Cell Events: 2629 mean_circ: 0.932413
Ran for 86050 frames Cell Events: 2640 mean_circ: 0.932428
Ran for 87050 frames Cell Events: 2673 mean_circ: 0.932452
Ran for 87550 frames Cell Events: 2690 mean_circ: 0.932499
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Ran for 91550 frames Cell Events: 2809 mean_circ: 0.93245
Ran for 92050 frames Cell Events: 2825 mean_circ: 0.932493
Ran for 92550 frames Cell Events: 2838 mean_circ: 0.932387
Ran for 93050 frames Cell Events: 2846 mean_circ: 0.932413
Ran for 93550 frames Cell Events: 2862 mean_circ: 0.932369
Ran for 94050 frames Cell Events: 2886 mean_circ: 0.932443
Ran for 95050 frames Cell Events: 2921 mean_circ: 0.932412
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Ran for 96050 frames Cell Events: 2951 mean_circ: 0.932521
Ran for 97050 frames Cell Events: 2968 mean_circ: 0.932452
Ran for 97550 frames Cell Events: 2984 mean_circ: 0.932346
Ran for 98050 frames Cell Events: 2999 mean_circ: 0.932259
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Ran for 102550 frames Cell Events: 3142 mean_circ: 0.932498
Ran for 103050 frames Cell Events: 3158 mean_circ: 0.932525
Ran for 103550 frames Cell Events: 3174 mean_circ: 0.932495
Ran for 104050 frames Cell Events: 3194 mean_circ: 0.93234
Ran for 104550 frames Cell Events: 3206 mean_circ: 0.932343
Ran for 107050 frames Cell Events: 3303 mean_circ: 0.932195
Ran for 107550 frames Cell Events: 3319 mean_circ: 0.932199
Ran for 108050 frames Cell Events: 3330 mean_circ: 0.932232
Ran for 108550 frames Cell Events: 3343 mean_circ: 0.932271
Ran for 109050 frames Cell Events: 3355 mean_circ: 0.932211
Ran for 110050 frames Cell Events: 3399 mean_circ: 0.93226
Ran for 110550 frames Cell Events: 3410 mean_circ: 0.932281
Ran for 111050 frames Cell Events: 3422 mean_circ: 0.93225
Ran for 111550 frames Cell Events: 3433 mean_circ: 0.932192
Ran for 112550 frames Cell Events: 3461 mean_circ: 0.932225
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Ran for 114050 frames Cell Events: 3495 mean_circ: 0.932188
Ran for 114550 frames Cell Events: 3508 mean_circ: 0.932201
Ran for 115050 frames Cell Events: 3524 mean_circ: 0.932288
Ran for 115550 frames Cell Events: 3546 mean_circ: 0.9323
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Ran for 119050 frames Cell Events: 3679 mean_circ: 0.932213
Ran for 119550 frames Cell Events: 3696 mean_circ: 0.93221
Ran for 120050 frames Cell Events: 3709 mean_circ: 0.93222
Ran for 120550 frames Cell Events: 3727 mean_circ: 0.932307
Ran for 121050 frames Cell Events: 3746 mean_circ: 0.932309
Ran for 121550 frames Cell Events: 3761 mean_circ: 0.932265
Ran for 122050 frames Cell Events: 3773 mean_circ: 0.932249
Ran for 122550 frames Cell Events: 3786 mean_circ: 0.932245
Ran for 123550 frames Cell Events: 3813 mean_circ: 0.932351
Ran for 125050 frames Cell Events: 3862 mean_circ: 0.932349
Ran for 125550 frames Cell Events: 3872 mean_circ: 0.932303
Ran for 126050 frames Cell Events: 3889 mean_circ: 0.932246
Ran for 126550 frames Cell Events: 3906 mean_circ: 0.932257
Ran for 127550 frames Cell Events: 3944 mean_circ: 0.932247
Ran for 128050 frames Cell Events: 3953 mean_circ: 0.932256
Ran for 128550 frames Cell Events: 3967 mean_circ: 0.932247
Ran for 129050 frames Cell Events: 3980 mean_circ: 0.93226
Ran for 129550 frames Cell Events: 3992 mean_circ: 0.93228
Ran for 130050 frames Cell Events: 4004 mean_circ: 0.932209
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Ran for 131550 frames Cell Events: 4042 mean_circ: 0.932187
Ran for 132050 frames Cell Events: 4056 mean_circ: 0.93219
Ran for 132550 frames Cell Events: 4066 mean_circ: 0.932181
Ran for 133050 frames Cell Events: 4075 mean_circ: 0.932233
Ran for 133550 frames Cell Events: 4086 mean_circ: 0.932147
Ran for 134050 frames Cell Events: 4104 mean_circ: 0.932137
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Ran for 149050 frames Cell Events: 4572 mean_circ: 0.932
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Ran for 157050 frames Cell Events: 4805 mean_circ: 0.932142
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Ran for 161550 frames Cell Events: 4929 mean_circ: 0.932095
Ran for 162050 frames Cell Events: 4950 mean_circ: 0.932107
Ran for 162550 frames Cell Events: 4964 mean_circ: 0.932118
Ran for 163050 frames Cell Events: 4979 mean_circ: 0.932109
Ran for 164050 frames Cell Events: 5006 mean_circ: 0.932007
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Ran for 166550 frames Cell Events: 5079 mean_circ: 0.931947
Ran for 167050 frames Cell Events: 5093 mean_circ: 0.931941
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Ran for 172050 frames Cell Events: 5231 mean_circ: 0.931933
Ran for 172550 frames Cell Events: 5247 mean_circ: 0.931919
Ran for 173050 frames Cell Events: 5260 mean_circ: 0.931923
Ran for 174050 frames Cell Events: 5297 mean_circ: 0.931961
Ran for 174550 frames Cell Events: 5309 mean_circ: 0.931988
Ran for 175050 frames Cell Events: 5327 mean_circ: 0.932053
Ran for 176050 frames Cell Events: 5361 mean_circ: 0.93206
Ran for 176550 frames Cell Events: 5392 mean_circ: 0.93209
Ran for 177050 frames Cell Events: 5400 mean_circ: 0.932075
Ran for 177550 frames Cell Events: 5416 mean_circ: 0.932102
Ran for 178550 frames Cell Events: 5464 mean_circ: 0.932111
Ran for 179050 frames Cell Events: 5476 mean_circ: 0.932096
Ran for 180050 frames Cell Events: 5509 mean_circ: 0.932167
Ran for 180550 frames Cell Events: 5524 mean_circ: 0.932194
Ran for 181050 frames Cell Events: 5548 mean_circ: 0.932209
Ran for 181550 frames Cell Events: 5559 mean_circ: 0.932218
Ran for 182050 frames Cell Events: 5566 mean_circ: 0.932215
Ran for 182550 frames Cell Events: 5585 mean_circ: 0.93228
Ran for 183050 frames Cell Events: 5600 mean_circ: 0.932312
Ran for 183550 frames Cell Events: 5613 mean_circ: 0.932296
Ran for 184550 frames Cell Events: 5644 mean_circ: 0.932315
Ran for 185050 frames Cell Events: 5662 mean_circ: 0.932309
Ran for 185550 frames Cell Events: 5677 mean_circ: 0.932348
Ran for 186050 frames Cell Events: 5688 mean_circ: 0.932347
Ran for 187050 frames Cell Events: 5720 mean_circ: 0.93236
Ran for 187550 frames Cell Events: 5737 mean_circ: 0.932325
Ran for 188050 frames Cell Events: 5751 mean_circ: 0.932323
Ran for 188550 frames Cell Events: 5758 mean_circ: 0.932368
Ran for 189050 frames Cell Events: 5765 mean_circ: 0.932367
Ran for 189550 frames Cell Events: 5773 mean_circ: 0.932356
Ran for 191050 frames Cell Events: 5806 mean_circ: 0.932374
Ran for 192050 frames Cell Events: 5830 mean_circ: 0.932353
Ran for 192550 frames Cell Events: 5839 mean_circ: 0.932358
Ran for 193050 frames Cell Events: 5850 mean_circ: 0.93237
Ran for 193550 frames Cell Events: 5861 mean_circ: 0.932404
Ran for 194050 frames Cell Events: 5872 mean_circ: 0.932447
Ran for 194550 frames Cell Events: 5883 mean_circ: 0.932462
Ran for 195050 frames Cell Events: 5902 mean_circ: 0.932461
Ran for 195550 frames Cell Events: 5910 mean_circ: 0.932505
Ran for 196050 frames Cell Events: 5924 mean_circ: 0.932479
Ran for 196550 frames Cell Events: 5935 mean_circ: 0.932462
Ran for 197050 frames Cell Events: 5950 mean_circ: 0.932485
Ran for 197550 frames Cell Events: 5966 mean_circ: 0.932492
Ran for 198050 frames Cell Events: 5979 mean_circ: 0.932498
Ran for 198550 frames Cell Events: 5989 mean_circ: 0.93246
Ran for 199550 frames Cell Events: 6018 mean_circ: 0.93247
Ran for 201050 frames Cell Events: 6052 mean_circ: 0.932477
Ran for 201550 frames Cell Events: 6064 mean_circ: 0.9325
Ran for 202550 frames Cell Events: 6102 mean_circ: 0.932469
Ran for 203550 frames Cell Events: 6125 mean_circ: 0.93248
Ran for 206550 frames Cell Events: 6204 mean_circ: 0.932613
Ran for 207050 frames Cell Events: 6218 mean_circ: 0.93262
Ran for 207550 frames Cell Events: 6233 mean_circ: 0.932594
Ran for 208050 frames Cell Events: 6255 mean_circ: 0.93258
Ran for 208550 frames Cell Events: 6272 mean_circ: 0.93256
Ran for 209050 frames Cell Events: 6287 mean_circ: 0.932562
Ran for 209550 frames Cell Events: 6302 mean_circ: 0.932568
Ran for 210050 frames Cell Events: 6312 mean_circ: 0.932585
Ran for 210550 frames Cell Events: 6327 mean_circ: 0.932582
Ran for 211050 frames Cell Events: 6344 mean_circ: 0.932574
Ran for 211550 frames Cell Events: 6353 mean_circ: 0.932576
Ran for 212050 frames Cell Events: 6364 mean_circ: 0.932599
Ran for 212550 frames Cell Events: 6378 mean_circ: 0.932606
Ran for 213050 frames Cell Events: 6393 mean_circ: 0.932621
Ran for 214550 frames Cell Events: 6444 mean_circ: 0.932638
Ran for 215050 frames Cell Events: 6456 mean_circ: 0.932629
Ran for 215550 frames Cell Events: 6466 mean_circ: 0.932651
Ran for 217050 frames Cell Events: 6512 mean_circ: 0.932643
Ran for 217550 frames Cell Events: 6524 mean_circ: 0.93264
Ran for 218050 frames Cell Events: 6536 mean_circ: 0.93269
Ran for 218550 frames Cell Events: 6548 mean_circ: 0.932715
Ran for 219050 frames Cell Events: 6563 mean_circ: 0.932728
Ran for 221050 frames Cell Events: 6618 mean_circ: 0.932631
Ran for 221550 frames Cell Events: 6632 mean_circ: 0.932675
Ran for 222550 frames Cell Events: 6662 mean_circ: 0.932689
Ran for 223550 frames Cell Events: 6684 mean_circ: 0.932668
Ran for 224050 frames Cell Events: 6692 mean_circ: 0.932673
Ran for 224550 frames Cell Events: 6709 mean_circ: 0.932669
Ran for 225050 frames Cell Events: 6722 mean_circ: 0.932678
Ran for 225550 frames Cell Events: 6735 mean_circ: 0.932668
Ran for 226550 frames Cell Events: 6760 mean_circ: 0.932621
Ran for 227050 frames Cell Events: 6777 mean_circ: 0.932615
Ran for 228050 frames Cell Events: 6800 mean_circ: 0.932642
Ran for 228550 frames Cell Events: 6828 mean_circ: 0.932662
Ran for 229050 frames Cell Events: 6836 mean_circ: 0.932698
Ran for 230550 frames Cell Events: 6889 mean_circ: 0.93274
Ran for 231050 frames Cell Events: 6907 mean_circ: 0.932739
Ran for 231550 frames Cell Events: 6926 mean_circ: 0.932724
Ran for 232050 frames Cell Events: 6942 mean_circ: 0.932752
Ran for 232550 frames Cell Events: 6952 mean_circ: 0.932768
Ran for 233050 frames Cell Events: 6972 mean_circ: 0.932687
Ran for 235050 frames Cell Events: 7014 mean_circ: 0.932713
Ran for 236050 frames Cell Events: 7038 mean_circ: 0.932674
Ran for 237050 frames Cell Events: 7071 mean_circ: 0.9327
Ran for 237550 frames Cell Events: 7089 mean_circ: 0.932718
Ran for 238050 frames Cell Events: 7107 mean_circ: 0.932702
Ran for 238550 frames Cell Events: 7125 mean_circ: 0.932678
Ran for 239050 frames Cell Events: 7140 mean_circ: 0.932692
Ran for 239550 frames Cell Events: 7160 mean_circ: 0.932691
Ran for 240050 frames Cell Events: 7198 mean_circ: 0.932723
Ran for 240550 frames Cell Events: 7218 mean_circ: 0.932729
Ran for 241550 frames Cell Events: 7250 mean_circ: 0.932675
Ran for 242050 frames Cell Events: 7266 mean_circ: 0.932665
Ran for 242550 frames Cell Events: 7281 mean_circ: 0.932649
Ran for 243050 frames Cell Events: 7293 mean_circ: 0.932639
Ran for 243550 frames Cell Events: 7313 mean_circ: 0.93265
Ran for 244550 frames Cell Events: 7344 mean_circ: 0.932642
Ran for 245050 frames Cell Events: 7359 mean_circ: 0.932635
Ran for 245550 frames Cell Events: 7370 mean_circ: 0.932628
Ran for 246050 frames Cell Events: 7392 mean_circ: 0.932652
Ran for 246550 frames Cell Events: 7423 mean_circ: 0.932679
Ran for 247050 frames Cell Events: 7437 mean_circ: 0.932691
Ran for 247550 frames Cell Events: 7452 mean_circ: 0.932689
Ran for 248050 frames Cell Events: 7465 mean_circ: 0.932721
Ran for 248550 frames Cell Events: 7481 mean_circ: 0.932718
Ran for 249550 frames Cell Events: 7522 mean_circ: 0.932686
Ran for 250550 frames Cell Events: 7552 mean_circ: 0.932669
Ran for 251050 frames Cell Events: 7565 mean_circ: 0.932661
Ran for 251550 frames Cell Events: 7586 mean_circ: 0.93269
Ran for 252050 frames Cell Events: 7623 mean_circ: 0.932686
Ran for 252550 frames Cell Events: 7650 mean_circ: 0.932683
Ran for 253050 frames Cell Events: 7674 mean_circ: 0.932647
Ran for 253550 frames Cell Events: 7709 mean_circ: 0.932695
Ran for 254050 frames Cell Events: 7726 mean_circ: 0.93268
Ran for 254550 frames Cell Events: 7742 mean_circ: 0.932691
Ran for 255050 frames Cell Events: 7764 mean_circ: 0.932699
Ran for 255550 frames Cell Events: 7777 mean_circ: 0.932703
Ran for 256050 frames Cell Events: 7795 mean_circ: 0.93273
Ran for 256550 frames Cell Events: 7815 mean_circ: 0.932732
Ran for 257550 frames Cell Events: 7853 mean_circ: 0.932717
Ran for 258050 frames Cell Events: 7871 mean_circ: 0.932691
Ran for 258550 frames Cell Events: 7893 mean_circ: 0.93268
Ran for 259050 frames Cell Events: 7911 mean_circ: 0.932664
Ran for 260050 frames Cell Events: 7941 mean_circ: 0.932675
Ran for 260550 frames Cell Events: 7956 mean_circ: 0.932689
Ran for 261050 frames Cell Events: 7977 mean_circ: 0.932693
Ran for 261550 frames Cell Events: 7989 mean_circ: 0.932653
Ran for 262050 frames Cell Events: 7995 mean_circ: 0.932645
Ran for 262550 frames Cell Events: 8012 mean_circ: 0.932626
Ran for 263050 frames Cell Events: 8028 mean_circ: 0.932648
Ran for 264050 frames Cell Events: 8079 mean_circ: 0.93263
Ran for 264550 frames Cell Events: 8092 mean_circ: 0.932641
Ran for 265050 frames Cell Events: 8112 mean_circ: 0.932626
Ran for 265550 frames Cell Events: 8131 mean_circ: 0.93264
Ran for 266050 frames Cell Events: 8156 mean_circ: 0.932654
Ran for 267050 frames Cell Events: 8188 mean_circ: 0.932606
Ran for 268550 frames Cell Events: 8244 mean_circ: 0.932609
Ran for 269050 frames Cell Events: 8260 mean_circ: 0.932609
Ran for 270050 frames Cell Events: 8288 mean_circ: 0.932646
Ran for 270550 frames Cell Events: 8301 mean_circ: 0.932672
Ran for 271050 frames Cell Events: 8316 mean_circ: 0.932671
Ran for 271550 frames Cell Events: 8332 mean_circ: 0.932671
Ran for 272050 frames Cell Events: 8348 mean_circ: 0.932654
Ran for 272550 frames Cell Events: 8363 mean_circ: 0.932635
Ran for 273050 frames Cell Events: 8380 mean_circ: 0.932636
Ran for 273550 frames Cell Events: 8396 mean_circ: 0.932619
Ran for 274050 frames Cell Events: 8412 mean_circ: 0.9326
Ran for 274550 frames Cell Events: 8431 mean_circ: 0.932569
Ran for 275050 frames Cell Events: 8449 mean_circ: 0.9326
Ran for 275550 frames Cell Events: 8469 mean_circ: 0.932612
Ran for 276050 frames Cell Events: 8489 mean_circ: 0.932605
Ran for 276550 frames Cell Events: 8502 mean_circ: 0.93262
Ran for 278550 frames Cell Events: 8575 mean_circ: 0.932589
Ran for 279050 frames Cell Events: 8593 mean_circ: 0.932587
Ran for 279550 frames Cell Events: 8605 mean_circ: 0.932564
Ran for 280050 frames Cell Events: 8625 mean_circ: 0.932551
Ran for 281050 frames Cell Events: 8674 mean_circ: 0.932535
Ran for 281550 frames Cell Events: 8686 mean_circ: 0.932541
Ran for 282050 frames Cell Events: 8699 mean_circ: 0.932567
Ran for 282550 frames Cell Events: 8714 mean_circ: 0.932544
Ran for 284050 frames Cell Events: 8757 mean_circ: 0.932562
Ran for 285050 frames Cell Events: 8786 mean_circ: 0.932577
Ran for 285550 frames Cell Events: 8807 mean_circ: 0.932572
Ran for 286050 frames Cell Events: 8822 mean_circ: 0.932583
Ran for 287550 frames Cell Events: 8875 mean_circ: 0.932558
Ran for 288050 frames Cell Events: 8884 mean_circ: 0.932572
Ran for 289550 frames Cell Events: 8951 mean_circ: 0.932565
Ran for 290050 frames Cell Events: 8962 mean_circ: 0.932563
Ran for 290550 frames Cell Events: 8979 mean_circ: 0.932579
Ran for 291050 frames Cell Events: 9002 mean_circ: 0.932604
Ran for 291550 frames Cell Events: 9017 mean_circ: 0.932611
Ran for 292050 frames Cell Events: 9036 mean_circ: 0.932597
Ran for 292550 frames Cell Events: 9049 mean_circ: 0.932619
Ran for 293050 frames Cell Events: 9066 mean_circ: 0.932641
Ran for 293550 frames Cell Events: 9079 mean_circ: 0.932674
Ran for 294050 frames Cell Events: 9095 mean_circ: 0.93264
Ran for 294550 frames Cell Events: 9116 mean_circ: 0.932656
Ran for 295050 frames Cell Events: 9125 mean_circ: 0.932627
Ran for 295550 frames Cell Events: 9142 mean_circ: 0.93263
Ran for 296050 frames Cell Events: 9153 mean_circ: 0.932593
Ran for 296550 frames Cell Events: 9167 mean_circ: 0.932585
Ran for 297050 frames Cell Events: 9178 mean_circ: 0.932571
Ran for 298550 frames Cell Events: 9218 mean_circ: 0.932573
Ran for 299050 frames Cell Events: 9232 mean_circ: 0.932543
Ran for 299550 frames Cell Events: 9241 mean_circ: 0.932532
Ran for 300550 frames Cell Events: 9267 mean_circ: 0.932513
Ran for 301050 frames Cell Events: 9283 mean_circ: 0.93252
End this measurment..
Stopping time: 1.31659e+009
****************************************
Measurement finished
Mean Circularitiy: 0.932512
Mean Area: 579.404
Mean FL-1 intensity: 2345.29
Mean FL-2 intensity: 3734.24
Mean FL-3 intensity: 0
frames processed: 298887
Total Time: 150663ms
Number of Runs (new bg img) 0
Frames collected: 301217
Skipped frames: 8589
Rescued Frames: 445587
Samples DAQ: 75304265
Samples written: 150608446
Samples per Channel: 75304223
FPS: 1999.28
Samples per second: 499819
Expected samples/s: 500000
Events: 9286
Events per second: 61.6342
jumped back (PMT): 11
#Frames read, frequency
# 0 frames :401807
# 1 frames :180205
# 2 frames :6031
# 3 frames :2183
# 4 frames :860
# 5 frames :295
# 6 frames :3427
# 7 frames :2196
# 8 frames :1367
# 9 frames :629
# 10 frames :1073
# 11 frames :695
# 12 frames :527
# 13 frames :224
# 14 frames :223
# 15 frames :144
# 16 frames :137
# 17 frames :127
# 18 frames :68
# 19 frames :34
# 20 frames :27
# 21 frames :24
# 22 frames :21
# 23 frames :14
# 24 frames :12
# 25 frames :9
# 26 frames :6
# 27 frames :4
# 28 frames :4
# 29 frames :5
# 30 frames :4
# 31 frames :3
# 32 frames :4
# 33 frames :1
# 37 frames :3
# 40 frames :1
# 41 frames :2
# 42 frames :1
# 55 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.4606
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0