Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_11.31.26
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "c81b7ff964d4bc955b71da323bfad055",
"name": "M1_20170530_1436_dsRNA_K1_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "09:31:47"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.6441
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.31839e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.937059
Ran for 1050 frames Cell Events: 34 mean_circ: 0.94706
Ran for 1550 frames Cell Events: 45 mean_circ: 0.94674
Ran for 2050 frames Cell Events: 67 mean_circ: 0.941893
Ran for 2550 frames Cell Events: 76 mean_circ: 0.941752
Ran for 3050 frames Cell Events: 95 mean_circ: 0.941003
Ran for 3550 frames Cell Events: 109 mean_circ: 0.935657
Ran for 4050 frames Cell Events: 130 mean_circ: 0.935309
Ran for 6050 frames Cell Events: 206 mean_circ: 0.935513
Ran for 6550 frames Cell Events: 223 mean_circ: 0.936481
Ran for 7050 frames Cell Events: 227 mean_circ: 0.936473
Ran for 8050 frames Cell Events: 265 mean_circ: 0.937637
Ran for 8550 frames Cell Events: 284 mean_circ: 0.93772
Ran for 9550 frames Cell Events: 324 mean_circ: 0.937875
Ran for 10050 frames Cell Events: 339 mean_circ: 0.936897
Ran for 10550 frames Cell Events: 349 mean_circ: 0.936434
Ran for 11050 frames Cell Events: 356 mean_circ: 0.936398
Ran for 11550 frames Cell Events: 371 mean_circ: 0.936447
Ran for 12050 frames Cell Events: 393 mean_circ: 0.937654
Ran for 12550 frames Cell Events: 412 mean_circ: 0.938576
Ran for 13050 frames Cell Events: 430 mean_circ: 0.938849
Ran for 13550 frames Cell Events: 450 mean_circ: 0.939282
Ran for 14050 frames Cell Events: 462 mean_circ: 0.938771
Ran for 15050 frames Cell Events: 491 mean_circ: 0.938536
Ran for 15550 frames Cell Events: 510 mean_circ: 0.938805
Ran for 16050 frames Cell Events: 528 mean_circ: 0.939608
Ran for 16550 frames Cell Events: 537 mean_circ: 0.939376
Ran for 17050 frames Cell Events: 551 mean_circ: 0.939608
Ran for 18050 frames Cell Events: 583 mean_circ: 0.9396
Ran for 18550 frames Cell Events: 594 mean_circ: 0.93969
Ran for 19050 frames Cell Events: 609 mean_circ: 0.939096
Ran for 19550 frames Cell Events: 623 mean_circ: 0.939327
Ran for 20050 frames Cell Events: 639 mean_circ: 0.939348
Ran for 20550 frames Cell Events: 652 mean_circ: 0.938971
Ran for 21550 frames Cell Events: 682 mean_circ: 0.938047
Ran for 22050 frames Cell Events: 695 mean_circ: 0.93807
Ran for 22550 frames Cell Events: 713 mean_circ: 0.93794
Ran for 23050 frames Cell Events: 727 mean_circ: 0.937838
Ran for 23550 frames Cell Events: 748 mean_circ: 0.937429
Ran for 24050 frames Cell Events: 761 mean_circ: 0.937354
Ran for 24550 frames Cell Events: 775 mean_circ: 0.937447
Ran for 25050 frames Cell Events: 793 mean_circ: 0.937465
Ran for 25550 frames Cell Events: 817 mean_circ: 0.937631
Ran for 26050 frames Cell Events: 832 mean_circ: 0.937501
Ran for 26550 frames Cell Events: 843 mean_circ: 0.937457
Ran for 27050 frames Cell Events: 857 mean_circ: 0.937556
Ran for 27550 frames Cell Events: 876 mean_circ: 0.937465
Ran for 28050 frames Cell Events: 891 mean_circ: 0.937273
Ran for 28550 frames Cell Events: 903 mean_circ: 0.937375
Ran for 29050 frames Cell Events: 913 mean_circ: 0.937554
Ran for 29550 frames Cell Events: 926 mean_circ: 0.937634
Ran for 30050 frames Cell Events: 943 mean_circ: 0.937547
Ran for 30550 frames Cell Events: 955 mean_circ: 0.937714
Ran for 31050 frames Cell Events: 977 mean_circ: 0.937467
Ran for 31550 frames Cell Events: 990 mean_circ: 0.93742
Ran for 32050 frames Cell Events: 1004 mean_circ: 0.937268
Ran for 33050 frames Cell Events: 1034 mean_circ: 0.937361
Ran for 35050 frames Cell Events: 1123 mean_circ: 0.937081
Ran for 35550 frames Cell Events: 1139 mean_circ: 0.93698
Ran for 36050 frames Cell Events: 1152 mean_circ: 0.937014
Ran for 36550 frames Cell Events: 1169 mean_circ: 0.936969
Ran for 37050 frames Cell Events: 1186 mean_circ: 0.936884
Ran for 37550 frames Cell Events: 1195 mean_circ: 0.936783
Ran for 38050 frames Cell Events: 1208 mean_circ: 0.936973
Ran for 38550 frames Cell Events: 1227 mean_circ: 0.936951
Ran for 39050 frames Cell Events: 1245 mean_circ: 0.936915
Ran for 39550 frames Cell Events: 1259 mean_circ: 0.93704
Ran for 40050 frames Cell Events: 1276 mean_circ: 0.937186
Ran for 40550 frames Cell Events: 1296 mean_circ: 0.937269
Ran for 41050 frames Cell Events: 1316 mean_circ: 0.936992
Ran for 42050 frames Cell Events: 1350 mean_circ: 0.936659
Ran for 42550 frames Cell Events: 1367 mean_circ: 0.93662
Ran for 43550 frames Cell Events: 1395 mean_circ: 0.936687
Ran for 44050 frames Cell Events: 1409 mean_circ: 0.936534
Ran for 44550 frames Cell Events: 1429 mean_circ: 0.936441
Ran for 45550 frames Cell Events: 1459 mean_circ: 0.93636
Ran for 46050 frames Cell Events: 1469 mean_circ: 0.9363
Ran for 46550 frames Cell Events: 1493 mean_circ: 0.936265
Ran for 47050 frames Cell Events: 1509 mean_circ: 0.936226
Ran for 47550 frames Cell Events: 1523 mean_circ: 0.936186
Ran for 49050 frames Cell Events: 1577 mean_circ: 0.936319
Ran for 49550 frames Cell Events: 1599 mean_circ: 0.93635
Ran for 51550 frames Cell Events: 1667 mean_circ: 0.936228
Ran for 52050 frames Cell Events: 1681 mean_circ: 0.936194
Ran for 52550 frames Cell Events: 1691 mean_circ: 0.936277
Ran for 53050 frames Cell Events: 1705 mean_circ: 0.936298
Ran for 53550 frames Cell Events: 1724 mean_circ: 0.936377
Ran for 54050 frames Cell Events: 1737 mean_circ: 0.936473
Ran for 55050 frames Cell Events: 1759 mean_circ: 0.93653
Ran for 55550 frames Cell Events: 1774 mean_circ: 0.936508
Ran for 56050 frames Cell Events: 1785 mean_circ: 0.936444
Ran for 56550 frames Cell Events: 1802 mean_circ: 0.936292
Ran for 57050 frames Cell Events: 1810 mean_circ: 0.936329
Ran for 57550 frames Cell Events: 1836 mean_circ: 0.93644
Ran for 58050 frames Cell Events: 1859 mean_circ: 0.936582
Ran for 58550 frames Cell Events: 1879 mean_circ: 0.936559
Ran for 60050 frames Cell Events: 1949 mean_circ: 0.936765
Ran for 60550 frames Cell Events: 1963 mean_circ: 0.936888
Ran for 61050 frames Cell Events: 1968 mean_circ: 0.936712
Ran for 61550 frames Cell Events: 1980 mean_circ: 0.936823
Ran for 62050 frames Cell Events: 1991 mean_circ: 0.936806
Ran for 62550 frames Cell Events: 2010 mean_circ: 0.936778
Ran for 63550 frames Cell Events: 2053 mean_circ: 0.936847
Ran for 64050 frames Cell Events: 2067 mean_circ: 0.936819
Ran for 64550 frames Cell Events: 2083 mean_circ: 0.936828
Ran for 65550 frames Cell Events: 2112 mean_circ: 0.93666
Ran for 66050 frames Cell Events: 2127 mean_circ: 0.936598
Ran for 66550 frames Cell Events: 2145 mean_circ: 0.936672
Ran for 67050 frames Cell Events: 2159 mean_circ: 0.936768
Ran for 67550 frames Cell Events: 2175 mean_circ: 0.936719
Ran for 68050 frames Cell Events: 2205 mean_circ: 0.936749
Ran for 68550 frames Cell Events: 2231 mean_circ: 0.93687
Ran for 69050 frames Cell Events: 2256 mean_circ: 0.936947
Ran for 69550 frames Cell Events: 2270 mean_circ: 0.936914
Ran for 70550 frames Cell Events: 2330 mean_circ: 0.936778
Ran for 71550 frames Cell Events: 2360 mean_circ: 0.936761
Ran for 72050 frames Cell Events: 2381 mean_circ: 0.936839
Ran for 72550 frames Cell Events: 2414 mean_circ: 0.93682
Ran for 73050 frames Cell Events: 2427 mean_circ: 0.936822
Ran for 73550 frames Cell Events: 2446 mean_circ: 0.936768
Ran for 74550 frames Cell Events: 2481 mean_circ: 0.936746
Ran for 75550 frames Cell Events: 2508 mean_circ: 0.936677
Ran for 76050 frames Cell Events: 2525 mean_circ: 0.936475
Ran for 78050 frames Cell Events: 2598 mean_circ: 0.936423
Ran for 78550 frames Cell Events: 2610 mean_circ: 0.936467
Ran for 79050 frames Cell Events: 2625 mean_circ: 0.936389
Ran for 79550 frames Cell Events: 2641 mean_circ: 0.936362
Ran for 80050 frames Cell Events: 2655 mean_circ: 0.936336
Ran for 80550 frames Cell Events: 2662 mean_circ: 0.936373
Ran for 81050 frames Cell Events: 2675 mean_circ: 0.93629
Ran for 81550 frames Cell Events: 2696 mean_circ: 0.936238
Ran for 82050 frames Cell Events: 2714 mean_circ: 0.936263
Ran for 82550 frames Cell Events: 2720 mean_circ: 0.936336
Ran for 83550 frames Cell Events: 2756 mean_circ: 0.936259
Ran for 84050 frames Cell Events: 2769 mean_circ: 0.936313
Ran for 85050 frames Cell Events: 2797 mean_circ: 0.936178
Ran for 85550 frames Cell Events: 2813 mean_circ: 0.936159
Ran for 86050 frames Cell Events: 2828 mean_circ: 0.93624
Ran for 86550 frames Cell Events: 2840 mean_circ: 0.936222
Ran for 87050 frames Cell Events: 2853 mean_circ: 0.936152
Ran for 88550 frames Cell Events: 2913 mean_circ: 0.936087
Ran for 91550 frames Cell Events: 3022 mean_circ: 0.935924
Ran for 92050 frames Cell Events: 3043 mean_circ: 0.936024
Ran for 92550 frames Cell Events: 3062 mean_circ: 0.935999
Ran for 93050 frames Cell Events: 3076 mean_circ: 0.936018
Ran for 93550 frames Cell Events: 3086 mean_circ: 0.936
Ran for 94050 frames Cell Events: 3102 mean_circ: 0.936086
Ran for 95050 frames Cell Events: 3135 mean_circ: 0.935894
Ran for 95550 frames Cell Events: 3150 mean_circ: 0.935859
Ran for 97050 frames Cell Events: 3201 mean_circ: 0.936011
Ran for 98050 frames Cell Events: 3242 mean_circ: 0.935945
Ran for 98550 frames Cell Events: 3261 mean_circ: 0.935994
Ran for 99550 frames Cell Events: 3289 mean_circ: 0.935839
Ran for 100550 frames Cell Events: 3314 mean_circ: 0.935835
Ran for 102050 frames Cell Events: 3368 mean_circ: 0.935717
Ran for 102550 frames Cell Events: 3387 mean_circ: 0.93568
Ran for 103050 frames Cell Events: 3407 mean_circ: 0.935721
Ran for 103550 frames Cell Events: 3419 mean_circ: 0.935647
Ran for 104050 frames Cell Events: 3431 mean_circ: 0.93557
Ran for 104550 frames Cell Events: 3443 mean_circ: 0.935619
Ran for 105550 frames Cell Events: 3480 mean_circ: 0.935748
Ran for 106050 frames Cell Events: 3501 mean_circ: 0.935721
Ran for 106550 frames Cell Events: 3511 mean_circ: 0.935695
Ran for 107050 frames Cell Events: 3525 mean_circ: 0.935717
Ran for 108050 frames Cell Events: 3562 mean_circ: 0.935721
Ran for 109050 frames Cell Events: 3584 mean_circ: 0.935767
Ran for 109550 frames Cell Events: 3596 mean_circ: 0.935794
Ran for 110050 frames Cell Events: 3605 mean_circ: 0.935826
Ran for 111050 frames Cell Events: 3644 mean_circ: 0.935834
Ran for 111550 frames Cell Events: 3671 mean_circ: 0.935767
Ran for 112050 frames Cell Events: 3690 mean_circ: 0.935835
Ran for 113050 frames Cell Events: 3728 mean_circ: 0.935946
Ran for 113550 frames Cell Events: 3746 mean_circ: 0.935963
Ran for 115050 frames Cell Events: 3799 mean_circ: 0.935908
Ran for 115550 frames Cell Events: 3815 mean_circ: 0.935937
Ran for 116050 frames Cell Events: 3829 mean_circ: 0.935862
Ran for 116550 frames Cell Events: 3846 mean_circ: 0.935918
Ran for 117550 frames Cell Events: 3882 mean_circ: 0.935879
Ran for 118050 frames Cell Events: 3893 mean_circ: 0.935886
Ran for 118550 frames Cell Events: 3923 mean_circ: 0.935937
Ran for 119050 frames Cell Events: 3935 mean_circ: 0.936002
Ran for 119550 frames Cell Events: 3948 mean_circ: 0.935932
Ran for 120550 frames Cell Events: 3976 mean_circ: 0.93592
Ran for 121550 frames Cell Events: 4009 mean_circ: 0.935834
Ran for 122050 frames Cell Events: 4024 mean_circ: 0.935831
Ran for 122550 frames Cell Events: 4041 mean_circ: 0.935769
Ran for 123050 frames Cell Events: 4056 mean_circ: 0.93573
Ran for 123550 frames Cell Events: 4073 mean_circ: 0.9358
Ran for 124050 frames Cell Events: 4092 mean_circ: 0.935793
Ran for 124550 frames Cell Events: 4112 mean_circ: 0.935709
Ran for 125050 frames Cell Events: 4128 mean_circ: 0.935747
Ran for 125550 frames Cell Events: 4150 mean_circ: 0.935709
Ran for 126550 frames Cell Events: 4194 mean_circ: 0.935625
Ran for 127050 frames Cell Events: 4212 mean_circ: 0.935579
Ran for 127550 frames Cell Events: 4224 mean_circ: 0.935649
Ran for 128550 frames Cell Events: 4246 mean_circ: 0.935616
Ran for 129050 frames Cell Events: 4252 mean_circ: 0.935601
Ran for 130050 frames Cell Events: 4284 mean_circ: 0.935568
Ran for 130550 frames Cell Events: 4297 mean_circ: 0.935621
Ran for 131050 frames Cell Events: 4316 mean_circ: 0.935548
Ran for 132050 frames Cell Events: 4346 mean_circ: 0.935627
Ran for 133050 frames Cell Events: 4375 mean_circ: 0.935571
Ran for 133550 frames Cell Events: 4388 mean_circ: 0.935557
Ran for 134050 frames Cell Events: 4403 mean_circ: 0.935611
Ran for 134550 frames Cell Events: 4416 mean_circ: 0.935612
Ran for 135050 frames Cell Events: 4427 mean_circ: 0.935633
Ran for 135550 frames Cell Events: 4444 mean_circ: 0.935583
Ran for 136050 frames Cell Events: 4474 mean_circ: 0.935643
Ran for 136550 frames Cell Events: 4486 mean_circ: 0.935664
Ran for 137050 frames Cell Events: 4502 mean_circ: 0.935607
Ran for 137550 frames Cell Events: 4518 mean_circ: 0.93557
Ran for 138050 frames Cell Events: 4528 mean_circ: 0.935531
Ran for 138550 frames Cell Events: 4544 mean_circ: 0.935555
Ran for 139550 frames Cell Events: 4583 mean_circ: 0.935499
Ran for 140550 frames Cell Events: 4616 mean_circ: 0.935456
Ran for 141050 frames Cell Events: 4635 mean_circ: 0.935564
Ran for 141550 frames Cell Events: 4654 mean_circ: 0.935461
Ran for 142050 frames Cell Events: 4682 mean_circ: 0.9354
Ran for 142550 frames Cell Events: 4703 mean_circ: 0.935346
Ran for 143050 frames Cell Events: 4718 mean_circ: 0.93535
Ran for 143550 frames Cell Events: 4732 mean_circ: 0.935398
Ran for 144050 frames Cell Events: 4751 mean_circ: 0.93535
Ran for 144550 frames Cell Events: 4773 mean_circ: 0.935311
Ran for 145050 frames Cell Events: 4790 mean_circ: 0.935269
Ran for 145550 frames Cell Events: 4805 mean_circ: 0.935314
Ran for 146050 frames Cell Events: 4818 mean_circ: 0.935278
Ran for 146550 frames Cell Events: 4830 mean_circ: 0.935255
Ran for 147050 frames Cell Events: 4847 mean_circ: 0.935315
Ran for 147550 frames Cell Events: 4859 mean_circ: 0.935307
Ran for 148050 frames Cell Events: 4871 mean_circ: 0.93528
Ran for 148550 frames Cell Events: 4882 mean_circ: 0.935255
Ran for 149550 frames Cell Events: 4922 mean_circ: 0.935254
Ran for 150050 frames Cell Events: 4941 mean_circ: 0.935248
Ran for 151050 frames Cell Events: 4969 mean_circ: 0.935234
Ran for 151550 frames Cell Events: 4982 mean_circ: 0.935225
Ran for 152050 frames Cell Events: 5004 mean_circ: 0.935263
Ran for 152550 frames Cell Events: 5025 mean_circ: 0.935291
Ran for 153050 frames Cell Events: 5040 mean_circ: 0.935342
Ran for 153550 frames Cell Events: 5057 mean_circ: 0.935397
Ran for 154050 frames Cell Events: 5067 mean_circ: 0.935372
Ran for 154550 frames Cell Events: 5083 mean_circ: 0.935342
Ran for 155050 frames Cell Events: 5098 mean_circ: 0.935359
Ran for 155550 frames Cell Events: 5109 mean_circ: 0.935313
Ran for 156550 frames Cell Events: 5139 mean_circ: 0.935236
Ran for 157050 frames Cell Events: 5162 mean_circ: 0.935236
Ran for 158050 frames Cell Events: 5184 mean_circ: 0.935278
Ran for 158550 frames Cell Events: 5197 mean_circ: 0.935332
Ran for 159050 frames Cell Events: 5211 mean_circ: 0.935382
Ran for 159550 frames Cell Events: 5221 mean_circ: 0.935381
Ran for 160050 frames Cell Events: 5239 mean_circ: 0.935368
Ran for 160550 frames Cell Events: 5262 mean_circ: 0.935396
Ran for 161050 frames Cell Events: 5274 mean_circ: 0.935379
Ran for 161550 frames Cell Events: 5296 mean_circ: 0.935401
Ran for 162050 frames Cell Events: 5317 mean_circ: 0.935412
Ran for 162550 frames Cell Events: 5334 mean_circ: 0.935391
Ran for 163050 frames Cell Events: 5349 mean_circ: 0.935361
Ran for 164550 frames Cell Events: 5393 mean_circ: 0.935247
Ran for 166050 frames Cell Events: 5436 mean_circ: 0.935265
Ran for 168050 frames Cell Events: 5510 mean_circ: 0.935297
Ran for 168550 frames Cell Events: 5529 mean_circ: 0.935277
Ran for 169550 frames Cell Events: 5566 mean_circ: 0.935193
Ran for 170050 frames Cell Events: 5576 mean_circ: 0.935194
Ran for 170550 frames Cell Events: 5585 mean_circ: 0.935176
Ran for 171550 frames Cell Events: 5616 mean_circ: 0.935186
Ran for 172050 frames Cell Events: 5627 mean_circ: 0.93518
Ran for 172550 frames Cell Events: 5648 mean_circ: 0.935181
Ran for 173550 frames Cell Events: 5685 mean_circ: 0.935202
Ran for 174050 frames Cell Events: 5707 mean_circ: 0.935196
Ran for 174550 frames Cell Events: 5727 mean_circ: 0.93519
Ran for 175050 frames Cell Events: 5750 mean_circ: 0.935207
Ran for 175550 frames Cell Events: 5760 mean_circ: 0.935061
Ran for 176050 frames Cell Events: 5787 mean_circ: 0.93509
Ran for 176550 frames Cell Events: 5800 mean_circ: 0.93514
Ran for 177050 frames Cell Events: 5814 mean_circ: 0.935169
Ran for 177550 frames Cell Events: 5832 mean_circ: 0.93517
Ran for 178050 frames Cell Events: 5848 mean_circ: 0.935139
Ran for 178550 frames Cell Events: 5860 mean_circ: 0.93515
Ran for 179050 frames Cell Events: 5867 mean_circ: 0.935141
Ran for 179550 frames Cell Events: 5879 mean_circ: 0.935101
Ran for 180550 frames Cell Events: 5916 mean_circ: 0.935094
Ran for 181550 frames Cell Events: 5948 mean_circ: 0.935035
Ran for 182050 frames Cell Events: 5964 mean_circ: 0.935038
Ran for 183550 frames Cell Events: 6015 mean_circ: 0.934984
Ran for 184050 frames Cell Events: 6032 mean_circ: 0.934989
Ran for 185050 frames Cell Events: 6074 mean_circ: 0.935016
Ran for 185550 frames Cell Events: 6084 mean_circ: 0.935012
Ran for 186050 frames Cell Events: 6103 mean_circ: 0.935017
Ran for 187050 frames Cell Events: 6137 mean_circ: 0.935058
Ran for 189550 frames Cell Events: 6213 mean_circ: 0.93493
Ran for 190050 frames Cell Events: 6231 mean_circ: 0.93494
Ran for 190550 frames Cell Events: 6246 mean_circ: 0.934957
Ran for 191550 frames Cell Events: 6289 mean_circ: 0.935023
Ran for 192050 frames Cell Events: 6306 mean_circ: 0.93505
Ran for 192550 frames Cell Events: 6319 mean_circ: 0.935065
Ran for 193050 frames Cell Events: 6332 mean_circ: 0.934976
Ran for 193550 frames Cell Events: 6346 mean_circ: 0.934955
Ran for 194050 frames Cell Events: 6353 mean_circ: 0.934948
Ran for 194550 frames Cell Events: 6367 mean_circ: 0.934947
Ran for 195550 frames Cell Events: 6405 mean_circ: 0.934937
Ran for 196050 frames Cell Events: 6422 mean_circ: 0.934914
Ran for 196550 frames Cell Events: 6446 mean_circ: 0.934893
Ran for 198550 frames Cell Events: 6509 mean_circ: 0.934881
Ran for 199550 frames Cell Events: 6540 mean_circ: 0.934837
Ran for 200550 frames Cell Events: 6576 mean_circ: 0.934799
Ran for 201050 frames Cell Events: 6593 mean_circ: 0.934782
Ran for 202550 frames Cell Events: 6641 mean_circ: 0.934729
Ran for 203550 frames Cell Events: 6656 mean_circ: 0.93472
Ran for 204050 frames Cell Events: 6674 mean_circ: 0.934718
Ran for 204550 frames Cell Events: 6696 mean_circ: 0.934737
Ran for 205050 frames Cell Events: 6719 mean_circ: 0.934663
Ran for 205550 frames Cell Events: 6741 mean_circ: 0.934668
Ran for 206550 frames Cell Events: 6783 mean_circ: 0.934521
Ran for 207050 frames Cell Events: 6802 mean_circ: 0.934491
Ran for 208050 frames Cell Events: 6831 mean_circ: 0.934519
Ran for 209050 frames Cell Events: 6871 mean_circ: 0.934493
Ran for 209550 frames Cell Events: 6903 mean_circ: 0.934461
Ran for 210050 frames Cell Events: 6927 mean_circ: 0.934466
Ran for 210550 frames Cell Events: 6944 mean_circ: 0.934501
Ran for 211050 frames Cell Events: 6960 mean_circ: 0.934437
Ran for 212050 frames Cell Events: 6992 mean_circ: 0.93447
Ran for 213550 frames Cell Events: 7047 mean_circ: 0.934503
Ran for 215550 frames Cell Events: 7130 mean_circ: 0.934419
Ran for 216550 frames Cell Events: 7167 mean_circ: 0.934434
Ran for 217050 frames Cell Events: 7178 mean_circ: 0.934476
Ran for 217550 frames Cell Events: 7191 mean_circ: 0.934487
Ran for 218050 frames Cell Events: 7214 mean_circ: 0.93451
Ran for 219050 frames Cell Events: 7245 mean_circ: 0.934515
Ran for 219550 frames Cell Events: 7267 mean_circ: 0.934492
Ran for 220050 frames Cell Events: 7283 mean_circ: 0.93449
Ran for 221050 frames Cell Events: 7322 mean_circ: 0.934414
Ran for 221550 frames Cell Events: 7339 mean_circ: 0.934396
Ran for 222050 frames Cell Events: 7355 mean_circ: 0.934385
Ran for 222550 frames Cell Events: 7381 mean_circ: 0.934389
Ran for 223550 frames Cell Events: 7391 mean_circ: 0.934426
Ran for 224050 frames Cell Events: 7401 mean_circ: 0.934422
Ran for 224550 frames Cell Events: 7419 mean_circ: 0.934421
Ran for 225050 frames Cell Events: 7433 mean_circ: 0.934412
Ran for 226550 frames Cell Events: 7453 mean_circ: 0.934431
Ran for 229050 frames Cell Events: 7537 mean_circ: 0.934444
Ran for 229550 frames Cell Events: 7548 mean_circ: 0.934435
Ran for 230050 frames Cell Events: 7559 mean_circ: 0.93445
Ran for 230550 frames Cell Events: 7582 mean_circ: 0.934428
Ran for 231050 frames Cell Events: 7597 mean_circ: 0.934428
Ran for 232050 frames Cell Events: 7639 mean_circ: 0.934392
Ran for 232550 frames Cell Events: 7646 mean_circ: 0.934393
Ran for 233050 frames Cell Events: 7668 mean_circ: 0.934401
Ran for 233550 frames Cell Events: 7683 mean_circ: 0.934365
Ran for 234050 frames Cell Events: 7702 mean_circ: 0.93438
Ran for 234550 frames Cell Events: 7717 mean_circ: 0.934394
Ran for 235050 frames Cell Events: 7730 mean_circ: 0.934377
Ran for 235550 frames Cell Events: 7747 mean_circ: 0.934407
Ran for 236050 frames Cell Events: 7760 mean_circ: 0.934399
Ran for 237050 frames Cell Events: 7801 mean_circ: 0.934425
Ran for 237550 frames Cell Events: 7813 mean_circ: 0.934442
Ran for 239550 frames Cell Events: 7904 mean_circ: 0.934388
Ran for 240050 frames Cell Events: 7918 mean_circ: 0.934412
Ran for 240550 frames Cell Events: 7933 mean_circ: 0.934409
Ran for 241050 frames Cell Events: 7947 mean_circ: 0.934417
Ran for 241550 frames Cell Events: 7966 mean_circ: 0.93441
Ran for 242050 frames Cell Events: 7988 mean_circ: 0.934389
Ran for 243050 frames Cell Events: 8031 mean_circ: 0.934333
Ran for 243550 frames Cell Events: 8050 mean_circ: 0.934337
Ran for 244550 frames Cell Events: 8085 mean_circ: 0.934337
Ran for 245050 frames Cell Events: 8097 mean_circ: 0.934297
Ran for 245550 frames Cell Events: 8108 mean_circ: 0.934277
Ran for 246050 frames Cell Events: 8126 mean_circ: 0.934263
End this measurment..
Stopping time: 1.31851e+009
****************************************
Measurement finished
Mean Circularitiy: 0.934143
Mean Area: 620.672
Mean FL-1 intensity: 2516.05
Mean FL-2 intensity: 3384.15
Mean FL-3 intensity: 0
frames processed: 244398
Total Time: 123148ms
Number of Runs (new bg img) 0
Frames collected: 246104
Skipped frames: 16636
Rescued Frames: 874975
Samples DAQ: 61525986
Samples written: 123051730
Samples per Channel: 61525865
FPS: 1998.43
Samples per second: 499607
Expected samples/s: 500000
Events: 8128
Events per second: 66.0016
jumped back (PMT): 5527
#Frames read, frequency
# 0 frames :337631
# 1 frames :136484
# 2 frames :5846
# 3 frames :1585
# 4 frames :903
# 5 frames :418
# 6 frames :2208
# 7 frames :1808
# 8 frames :1173
# 9 frames :818
# 10 frames :1015
# 11 frames :510
# 12 frames :429
# 13 frames :230
# 14 frames :221
# 15 frames :223
# 16 frames :169
# 17 frames :132
# 18 frames :79
# 19 frames :48
# 20 frames :48
# 21 frames :39
# 22 frames :28
# 23 frames :35
# 24 frames :16
# 25 frames :13
# 26 frames :10
# 27 frames :4
# 28 frames :4
# 29 frames :4
# 30 frames :7
# 31 frames :4
# 32 frames :1
# 33 frames :2
# 34 frames :1
# 36 frames :3
# 38 frames :2
# 39 frames :2
# 40 frames :2
# 41 frames :1
# 45 frames :1
# 48 frames :1
# 49 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.6441
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0