Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_11.38.04
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "44465ef7abe5ea5bc255111223d26a63",
"name": "M1_20170530_1550_dsRNA_I7_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "09:38:27"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8580 (max 8581) in '8580'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.8649
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.32286e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 20 mean_circ: 0.912855
Ran for 1550 frames Cell Events: 50 mean_circ: 0.930515
Ran for 2050 frames Cell Events: 72 mean_circ: 0.929333
Ran for 2550 frames Cell Events: 92 mean_circ: 0.9327
Ran for 3050 frames Cell Events: 108 mean_circ: 0.933161
Ran for 3550 frames Cell Events: 120 mean_circ: 0.9334
Ran for 4550 frames Cell Events: 132 mean_circ: 0.932377
Ran for 5050 frames Cell Events: 144 mean_circ: 0.933062
Ran for 5550 frames Cell Events: 157 mean_circ: 0.932977
Ran for 6050 frames Cell Events: 175 mean_circ: 0.932254
Ran for 6550 frames Cell Events: 186 mean_circ: 0.932723
Ran for 8050 frames Cell Events: 233 mean_circ: 0.933239
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Ran for 10050 frames Cell Events: 296 mean_circ: 0.931827
Ran for 10550 frames Cell Events: 311 mean_circ: 0.931357
Ran for 11050 frames Cell Events: 324 mean_circ: 0.931767
Ran for 12550 frames Cell Events: 382 mean_circ: 0.93191
Ran for 13550 frames Cell Events: 398 mean_circ: 0.931775
Ran for 14050 frames Cell Events: 419 mean_circ: 0.930589
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Ran for 15550 frames Cell Events: 464 mean_circ: 0.931313
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Ran for 34050 frames Cell Events: 1052 mean_circ: 0.932211
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Ran for 36050 frames Cell Events: 1096 mean_circ: 0.931976
Ran for 37050 frames Cell Events: 1127 mean_circ: 0.932127
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Ran for 38550 frames Cell Events: 1178 mean_circ: 0.932097
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Ran for 40050 frames Cell Events: 1219 mean_circ: 0.932044
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Ran for 43550 frames Cell Events: 1317 mean_circ: 0.932166
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Ran for 63550 frames Cell Events: 1919 mean_circ: 0.932787
Ran for 64050 frames Cell Events: 1933 mean_circ: 0.932868
Ran for 64550 frames Cell Events: 1946 mean_circ: 0.932849
Ran for 65050 frames Cell Events: 1956 mean_circ: 0.932876
Ran for 65550 frames Cell Events: 1967 mean_circ: 0.932859
Ran for 66050 frames Cell Events: 1989 mean_circ: 0.932882
Ran for 66550 frames Cell Events: 2010 mean_circ: 0.932991
Ran for 67550 frames Cell Events: 2033 mean_circ: 0.933244
Ran for 68550 frames Cell Events: 2071 mean_circ: 0.933302
Ran for 69550 frames Cell Events: 2107 mean_circ: 0.933222
Ran for 70050 frames Cell Events: 2132 mean_circ: 0.933407
Ran for 70550 frames Cell Events: 2148 mean_circ: 0.933284
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Ran for 71550 frames Cell Events: 2184 mean_circ: 0.933347
Ran for 72050 frames Cell Events: 2197 mean_circ: 0.933468
Ran for 72550 frames Cell Events: 2212 mean_circ: 0.933472
Ran for 74550 frames Cell Events: 2280 mean_circ: 0.933353
Ran for 75550 frames Cell Events: 2310 mean_circ: 0.933443
Ran for 77050 frames Cell Events: 2368 mean_circ: 0.93341
Ran for 77550 frames Cell Events: 2379 mean_circ: 0.933336
Ran for 78050 frames Cell Events: 2397 mean_circ: 0.933461
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Ran for 80050 frames Cell Events: 2460 mean_circ: 0.933355
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Ran for 81050 frames Cell Events: 2495 mean_circ: 0.933226
Ran for 82050 frames Cell Events: 2524 mean_circ: 0.933048
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Ran for 83050 frames Cell Events: 2559 mean_circ: 0.932988
Ran for 84050 frames Cell Events: 2592 mean_circ: 0.932982
Ran for 84550 frames Cell Events: 2604 mean_circ: 0.93291
Ran for 85050 frames Cell Events: 2630 mean_circ: 0.932828
Ran for 85550 frames Cell Events: 2653 mean_circ: 0.932797
Ran for 86050 frames Cell Events: 2672 mean_circ: 0.932808
Ran for 87050 frames Cell Events: 2710 mean_circ: 0.932836
Ran for 87550 frames Cell Events: 2730 mean_circ: 0.932884
Ran for 88050 frames Cell Events: 2754 mean_circ: 0.932853
Ran for 89550 frames Cell Events: 2805 mean_circ: 0.932957
Ran for 90050 frames Cell Events: 2825 mean_circ: 0.932971
Ran for 90550 frames Cell Events: 2842 mean_circ: 0.933027
Ran for 91050 frames Cell Events: 2853 mean_circ: 0.932943
Ran for 91550 frames Cell Events: 2867 mean_circ: 0.932983
Ran for 92050 frames Cell Events: 2890 mean_circ: 0.932997
Ran for 92550 frames Cell Events: 2911 mean_circ: 0.932995
Ran for 93050 frames Cell Events: 2926 mean_circ: 0.933021
Ran for 93550 frames Cell Events: 2937 mean_circ: 0.932922
Ran for 94550 frames Cell Events: 2967 mean_circ: 0.93288
Ran for 95050 frames Cell Events: 2988 mean_circ: 0.932749
Ran for 95550 frames Cell Events: 3009 mean_circ: 0.93281
Ran for 96050 frames Cell Events: 3035 mean_circ: 0.932879
Ran for 97050 frames Cell Events: 3055 mean_circ: 0.932873
Ran for 97550 frames Cell Events: 3070 mean_circ: 0.932892
Ran for 98050 frames Cell Events: 3084 mean_circ: 0.932889
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Ran for 100050 frames Cell Events: 3141 mean_circ: 0.933002
Ran for 100550 frames Cell Events: 3153 mean_circ: 0.932979
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Ran for 102050 frames Cell Events: 3197 mean_circ: 0.932939
Ran for 102550 frames Cell Events: 3206 mean_circ: 0.932964
Ran for 103550 frames Cell Events: 3235 mean_circ: 0.932857
Ran for 104050 frames Cell Events: 3240 mean_circ: 0.932862
Ran for 104550 frames Cell Events: 3255 mean_circ: 0.932871
Ran for 105550 frames Cell Events: 3291 mean_circ: 0.932908
Ran for 106050 frames Cell Events: 3311 mean_circ: 0.932802
Ran for 106550 frames Cell Events: 3321 mean_circ: 0.932754
Ran for 107050 frames Cell Events: 3337 mean_circ: 0.93281
Ran for 107550 frames Cell Events: 3348 mean_circ: 0.932756
Ran for 108050 frames Cell Events: 3364 mean_circ: 0.932861
Ran for 108550 frames Cell Events: 3376 mean_circ: 0.932864
Ran for 109050 frames Cell Events: 3405 mean_circ: 0.932753
Ran for 110050 frames Cell Events: 3441 mean_circ: 0.932871
Ran for 110550 frames Cell Events: 3463 mean_circ: 0.932858
Ran for 111050 frames Cell Events: 3483 mean_circ: 0.932863
Ran for 112050 frames Cell Events: 3521 mean_circ: 0.932779
Ran for 112550 frames Cell Events: 3544 mean_circ: 0.932836
Ran for 113550 frames Cell Events: 3584 mean_circ: 0.932725
Ran for 114050 frames Cell Events: 3602 mean_circ: 0.932731
Ran for 114550 frames Cell Events: 3615 mean_circ: 0.93273
Ran for 115050 frames Cell Events: 3633 mean_circ: 0.932682
Ran for 117050 frames Cell Events: 3707 mean_circ: 0.932671
Ran for 118550 frames Cell Events: 3758 mean_circ: 0.932642
Ran for 119050 frames Cell Events: 3770 mean_circ: 0.93271
Ran for 120050 frames Cell Events: 3814 mean_circ: 0.932638
Ran for 120550 frames Cell Events: 3847 mean_circ: 0.932718
Ran for 121050 frames Cell Events: 3869 mean_circ: 0.932712
Ran for 121550 frames Cell Events: 3888 mean_circ: 0.932761
Ran for 122050 frames Cell Events: 3903 mean_circ: 0.93277
Ran for 123050 frames Cell Events: 3927 mean_circ: 0.932764
Ran for 124050 frames Cell Events: 3962 mean_circ: 0.932832
Ran for 124550 frames Cell Events: 3983 mean_circ: 0.932791
Ran for 125050 frames Cell Events: 4000 mean_circ: 0.932894
Ran for 125550 frames Cell Events: 4029 mean_circ: 0.932803
Ran for 126550 frames Cell Events: 4112 mean_circ: 0.932662
Ran for 127050 frames Cell Events: 4131 mean_circ: 0.932619
Ran for 128050 frames Cell Events: 4163 mean_circ: 0.932537
Ran for 128550 frames Cell Events: 4180 mean_circ: 0.932544
Ran for 129050 frames Cell Events: 4199 mean_circ: 0.932566
Ran for 129550 frames Cell Events: 4222 mean_circ: 0.932607
Ran for 130050 frames Cell Events: 4241 mean_circ: 0.932567
Ran for 130550 frames Cell Events: 4252 mean_circ: 0.932587
Ran for 131050 frames Cell Events: 4262 mean_circ: 0.932566
Ran for 131550 frames Cell Events: 4278 mean_circ: 0.932591
Ran for 132050 frames Cell Events: 4293 mean_circ: 0.93258
Ran for 132550 frames Cell Events: 4309 mean_circ: 0.932579
Ran for 133550 frames Cell Events: 4352 mean_circ: 0.932571
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Ran for 135550 frames Cell Events: 4420 mean_circ: 0.932586
Ran for 136050 frames Cell Events: 4438 mean_circ: 0.932555
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Ran for 141550 frames Cell Events: 4648 mean_circ: 0.932677
Ran for 142050 frames Cell Events: 4661 mean_circ: 0.932651
Ran for 142550 frames Cell Events: 4678 mean_circ: 0.932632
Ran for 143050 frames Cell Events: 4698 mean_circ: 0.932632
Ran for 143550 frames Cell Events: 4710 mean_circ: 0.932601
Ran for 144050 frames Cell Events: 4730 mean_circ: 0.932538
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Ran for 147050 frames Cell Events: 4852 mean_circ: 0.932254
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Ran for 157050 frames Cell Events: 5175 mean_circ: 0.932422
Ran for 158050 frames Cell Events: 5215 mean_circ: 0.93247
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Ran for 159550 frames Cell Events: 5262 mean_circ: 0.93245
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Ran for 160550 frames Cell Events: 5291 mean_circ: 0.932453
Ran for 161050 frames Cell Events: 5310 mean_circ: 0.932515
Ran for 161550 frames Cell Events: 5324 mean_circ: 0.932411
Ran for 162050 frames Cell Events: 5336 mean_circ: 0.932383
Ran for 162550 frames Cell Events: 5361 mean_circ: 0.93232
Ran for 163050 frames Cell Events: 5374 mean_circ: 0.932349
Ran for 163550 frames Cell Events: 5390 mean_circ: 0.932342
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Ran for 167050 frames Cell Events: 5496 mean_circ: 0.93245
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Ran for 170550 frames Cell Events: 5574 mean_circ: 0.932447
Ran for 171050 frames Cell Events: 5589 mean_circ: 0.932463
Ran for 171550 frames Cell Events: 5602 mean_circ: 0.932518
Ran for 172050 frames Cell Events: 5629 mean_circ: 0.932564
Ran for 172550 frames Cell Events: 5654 mean_circ: 0.932591
Ran for 173050 frames Cell Events: 5665 mean_circ: 0.932574
Ran for 174050 frames Cell Events: 5703 mean_circ: 0.93261
Ran for 174550 frames Cell Events: 5719 mean_circ: 0.932667
Ran for 175050 frames Cell Events: 5736 mean_circ: 0.9327
Ran for 175550 frames Cell Events: 5752 mean_circ: 0.932681
Ran for 176050 frames Cell Events: 5762 mean_circ: 0.932706
Ran for 177550 frames Cell Events: 5812 mean_circ: 0.932785
Ran for 178050 frames Cell Events: 5831 mean_circ: 0.932753
Ran for 179050 frames Cell Events: 5865 mean_circ: 0.932758
Ran for 179550 frames Cell Events: 5876 mean_circ: 0.932751
Ran for 181550 frames Cell Events: 5922 mean_circ: 0.932817
Ran for 182050 frames Cell Events: 5942 mean_circ: 0.93282
Ran for 182550 frames Cell Events: 5961 mean_circ: 0.932833
Ran for 184050 frames Cell Events: 6022 mean_circ: 0.932717
Ran for 184550 frames Cell Events: 6033 mean_circ: 0.932715
Ran for 185050 frames Cell Events: 6049 mean_circ: 0.932725
Ran for 185550 frames Cell Events: 6066 mean_circ: 0.932704
Ran for 186050 frames Cell Events: 6082 mean_circ: 0.932735
Ran for 186550 frames Cell Events: 6101 mean_circ: 0.932669
Ran for 187050 frames Cell Events: 6117 mean_circ: 0.932664
Ran for 188050 frames Cell Events: 6154 mean_circ: 0.932622
Ran for 188550 frames Cell Events: 6170 mean_circ: 0.93266
Ran for 189050 frames Cell Events: 6191 mean_circ: 0.932651
Ran for 190050 frames Cell Events: 6224 mean_circ: 0.93267
Ran for 191050 frames Cell Events: 6267 mean_circ: 0.932645
Ran for 191550 frames Cell Events: 6300 mean_circ: 0.932672
Ran for 192050 frames Cell Events: 6319 mean_circ: 0.93269
Ran for 192550 frames Cell Events: 6335 mean_circ: 0.932726
Ran for 193050 frames Cell Events: 6342 mean_circ: 0.932744
Ran for 194050 frames Cell Events: 6381 mean_circ: 0.932754
Ran for 194550 frames Cell Events: 6402 mean_circ: 0.93275
Ran for 195050 frames Cell Events: 6423 mean_circ: 0.932783
Ran for 195550 frames Cell Events: 6446 mean_circ: 0.932769
Ran for 196550 frames Cell Events: 6471 mean_circ: 0.932764
Ran for 198550 frames Cell Events: 6541 mean_circ: 0.932721
Ran for 199550 frames Cell Events: 6583 mean_circ: 0.932753
Ran for 200050 frames Cell Events: 6602 mean_circ: 0.932772
Ran for 200550 frames Cell Events: 6614 mean_circ: 0.932799
Ran for 201050 frames Cell Events: 6627 mean_circ: 0.932841
Ran for 202050 frames Cell Events: 6659 mean_circ: 0.932872
Ran for 203050 frames Cell Events: 6688 mean_circ: 0.932907
Ran for 203550 frames Cell Events: 6710 mean_circ: 0.932901
Ran for 204050 frames Cell Events: 6725 mean_circ: 0.932908
Ran for 204550 frames Cell Events: 6739 mean_circ: 0.93294
Ran for 205550 frames Cell Events: 6767 mean_circ: 0.932947
Ran for 206050 frames Cell Events: 6779 mean_circ: 0.932991
Ran for 207050 frames Cell Events: 6819 mean_circ: 0.932882
Ran for 208050 frames Cell Events: 6853 mean_circ: 0.932896
Ran for 208550 frames Cell Events: 6880 mean_circ: 0.932896
Ran for 209050 frames Cell Events: 6891 mean_circ: 0.932861
Ran for 210050 frames Cell Events: 6923 mean_circ: 0.932843
Ran for 210550 frames Cell Events: 6941 mean_circ: 0.932795
Ran for 211050 frames Cell Events: 6958 mean_circ: 0.932783
Ran for 211550 frames Cell Events: 6975 mean_circ: 0.932805
Ran for 212050 frames Cell Events: 6990 mean_circ: 0.932795
Ran for 212550 frames Cell Events: 7009 mean_circ: 0.93279
Ran for 214050 frames Cell Events: 7075 mean_circ: 0.932771
Ran for 214550 frames Cell Events: 7100 mean_circ: 0.932785
Ran for 215050 frames Cell Events: 7126 mean_circ: 0.932804
Ran for 216550 frames Cell Events: 7180 mean_circ: 0.932779
Ran for 217050 frames Cell Events: 7200 mean_circ: 0.932732
Ran for 217550 frames Cell Events: 7212 mean_circ: 0.932737
Ran for 218050 frames Cell Events: 7223 mean_circ: 0.93275
Ran for 219050 frames Cell Events: 7254 mean_circ: 0.932762
Ran for 219550 frames Cell Events: 7272 mean_circ: 0.932764
Ran for 220550 frames Cell Events: 7296 mean_circ: 0.93277
Ran for 221550 frames Cell Events: 7338 mean_circ: 0.932807
Ran for 222050 frames Cell Events: 7358 mean_circ: 0.932793
Ran for 222550 frames Cell Events: 7367 mean_circ: 0.932767
Ran for 223050 frames Cell Events: 7390 mean_circ: 0.932767
Ran for 223550 frames Cell Events: 7400 mean_circ: 0.93275
Ran for 225550 frames Cell Events: 7464 mean_circ: 0.932752
Ran for 226050 frames Cell Events: 7482 mean_circ: 0.932731
Ran for 226550 frames Cell Events: 7500 mean_circ: 0.932767
Ran for 227050 frames Cell Events: 7514 mean_circ: 0.932755
Ran for 228050 frames Cell Events: 7541 mean_circ: 0.932779
Ran for 229050 frames Cell Events: 7578 mean_circ: 0.932808
Ran for 229550 frames Cell Events: 7607 mean_circ: 0.932831
Ran for 230050 frames Cell Events: 7619 mean_circ: 0.932809
Ran for 230550 frames Cell Events: 7643 mean_circ: 0.932775
Ran for 231050 frames Cell Events: 7656 mean_circ: 0.932811
Ran for 231550 frames Cell Events: 7677 mean_circ: 0.932827
Ran for 232050 frames Cell Events: 7692 mean_circ: 0.93284
Ran for 233550 frames Cell Events: 7744 mean_circ: 0.932832
Ran for 234050 frames Cell Events: 7765 mean_circ: 0.932854
Ran for 235550 frames Cell Events: 7817 mean_circ: 0.932901
Ran for 236050 frames Cell Events: 7829 mean_circ: 0.932907
Ran for 237050 frames Cell Events: 7853 mean_circ: 0.932947
Ran for 237550 frames Cell Events: 7874 mean_circ: 0.93297
Ran for 238050 frames Cell Events: 7887 mean_circ: 0.932978
Ran for 238550 frames Cell Events: 7912 mean_circ: 0.932976
Ran for 240050 frames Cell Events: 7969 mean_circ: 0.932885
Ran for 241050 frames Cell Events: 8007 mean_circ: 0.932868
Ran for 241550 frames Cell Events: 8024 mean_circ: 0.932873
Ran for 242050 frames Cell Events: 8040 mean_circ: 0.932861
Ran for 242550 frames Cell Events: 8057 mean_circ: 0.932862
Ran for 243050 frames Cell Events: 8069 mean_circ: 0.932873
Ran for 243550 frames Cell Events: 8089 mean_circ: 0.93284
Ran for 244550 frames Cell Events: 8128 mean_circ: 0.932854
Ran for 245050 frames Cell Events: 8150 mean_circ: 0.932826
Ran for 245550 frames Cell Events: 8161 mean_circ: 0.932839
Ran for 246050 frames Cell Events: 8171 mean_circ: 0.932841
Ran for 246550 frames Cell Events: 8189 mean_circ: 0.932829
Ran for 247550 frames Cell Events: 8215 mean_circ: 0.932788
Ran for 248050 frames Cell Events: 8235 mean_circ: 0.932824
Ran for 249050 frames Cell Events: 8281 mean_circ: 0.932867
Ran for 249550 frames Cell Events: 8294 mean_circ: 0.932865
Ran for 250050 frames Cell Events: 8316 mean_circ: 0.932864
Ran for 250550 frames Cell Events: 8333 mean_circ: 0.932856
Ran for 251050 frames Cell Events: 8349 mean_circ: 0.932827
Ran for 251550 frames Cell Events: 8377 mean_circ: 0.93284
Ran for 252550 frames Cell Events: 8386 mean_circ: 0.932811
Ran for 253050 frames Cell Events: 8399 mean_circ: 0.932792
Ran for 253550 frames Cell Events: 8418 mean_circ: 0.932842
Ran for 254050 frames Cell Events: 8439 mean_circ: 0.932866
Ran for 254550 frames Cell Events: 8453 mean_circ: 0.932875
Ran for 255050 frames Cell Events: 8465 mean_circ: 0.932879
Ran for 255550 frames Cell Events: 8490 mean_circ: 0.932883
Ran for 256050 frames Cell Events: 8515 mean_circ: 0.932898
Ran for 256550 frames Cell Events: 8526 mean_circ: 0.932855
Ran for 257050 frames Cell Events: 8536 mean_circ: 0.932825
Ran for 257550 frames Cell Events: 8565 mean_circ: 0.932794
End this measurment..
Stopping time: 1.32299e+009
****************************************
Measurement finished
Mean Circularitiy: 0.932778
Mean Area: 577.491
Mean FL-1 intensity: 2560.58
Mean FL-2 intensity: 3892.73
Mean FL-3 intensity: 0
frames processed: 254685
Total Time: 129061ms
Number of Runs (new bg img) 0
Frames collected: 257948
Skipped frames: 42047
Rescued Frames: 1990361
Samples DAQ: 64487051
Samples written: 128974020
Samples per Channel: 64487010
FPS: 1998.66
Samples per second: 499665
Expected samples/s: 500000
Events: 8581
Events per second: 66.4882
jumped back (PMT): 16
#Frames read, frequency
# 0 frames :344023
# 1 frames :153797
# 2 frames :5456
# 3 frames :1742
# 4 frames :687
# 5 frames :241
# 6 frames :3521
# 7 frames :2210
# 8 frames :1545
# 9 frames :674
# 10 frames :421
# 11 frames :300
# 12 frames :360
# 13 frames :201
# 14 frames :199
# 15 frames :134
# 16 frames :84
# 17 frames :66
# 18 frames :45
# 19 frames :21
# 20 frames :26
# 21 frames :21
# 22 frames :19
# 23 frames :10
# 24 frames :12
# 25 frames :1
# 26 frames :2
# 27 frames :12
# 28 frames :3
# 29 frames :3
# 30 frames :1
# 32 frames :2
# 33 frames :2
# 34 frames :1
# 35 frames :1
# 39 frames :2
# 41 frames :1
# 44 frames :1
# 54 frames :1
# 60 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.8649
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0