Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_11.42.19
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "b64bca273ba3b020510fb6a8026ca379",
"name": "M1_20170530_1641_dsRNA_I8_faster.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "09:42:42"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8852 (max 8853) in '8852'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.9599
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.32592e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 25 mean_circ: 0.922237
Ran for 1550 frames Cell Events: 50 mean_circ: 0.912017
Ran for 2050 frames Cell Events: 70 mean_circ: 0.916374
Ran for 2550 frames Cell Events: 94 mean_circ: 0.915268
Ran for 3050 frames Cell Events: 122 mean_circ: 0.91249
Ran for 3550 frames Cell Events: 144 mean_circ: 0.910294
Ran for 4050 frames Cell Events: 163 mean_circ: 0.910775
Ran for 4550 frames Cell Events: 186 mean_circ: 0.907791
Ran for 5050 frames Cell Events: 199 mean_circ: 0.908939
Ran for 5550 frames Cell Events: 220 mean_circ: 0.910128
Ran for 6050 frames Cell Events: 240 mean_circ: 0.91168
Ran for 6550 frames Cell Events: 258 mean_circ: 0.913273
Ran for 7050 frames Cell Events: 277 mean_circ: 0.91317
Ran for 7550 frames Cell Events: 292 mean_circ: 0.913434
Ran for 8050 frames Cell Events: 317 mean_circ: 0.913519
Ran for 8550 frames Cell Events: 340 mean_circ: 0.913987
Ran for 10050 frames Cell Events: 420 mean_circ: 0.911576
Ran for 10550 frames Cell Events: 444 mean_circ: 0.911517
Ran for 11050 frames Cell Events: 462 mean_circ: 0.911444
Ran for 11550 frames Cell Events: 479 mean_circ: 0.912085
Ran for 12050 frames Cell Events: 489 mean_circ: 0.91242
Ran for 13050 frames Cell Events: 540 mean_circ: 0.912495
Ran for 13550 frames Cell Events: 563 mean_circ: 0.912848
Ran for 14550 frames Cell Events: 605 mean_circ: 0.913322
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Ran for 19550 frames Cell Events: 796 mean_circ: 0.912345
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Ran for 26050 frames Cell Events: 1033 mean_circ: 0.911849
Ran for 26550 frames Cell Events: 1050 mean_circ: 0.911923
Ran for 27050 frames Cell Events: 1064 mean_circ: 0.912107
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Ran for 28550 frames Cell Events: 1111 mean_circ: 0.911736
Ran for 29050 frames Cell Events: 1130 mean_circ: 0.912225
Ran for 29550 frames Cell Events: 1144 mean_circ: 0.912382
Ran for 30050 frames Cell Events: 1169 mean_circ: 0.912354
Ran for 30550 frames Cell Events: 1191 mean_circ: 0.912412
Ran for 31550 frames Cell Events: 1223 mean_circ: 0.912647
Ran for 32050 frames Cell Events: 1248 mean_circ: 0.912404
Ran for 33050 frames Cell Events: 1286 mean_circ: 0.912528
Ran for 33550 frames Cell Events: 1298 mean_circ: 0.91236
Ran for 34050 frames Cell Events: 1313 mean_circ: 0.912543
Ran for 35550 frames Cell Events: 1359 mean_circ: 0.912206
Ran for 37050 frames Cell Events: 1423 mean_circ: 0.912331
Ran for 38050 frames Cell Events: 1465 mean_circ: 0.912158
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Ran for 45550 frames Cell Events: 1739 mean_circ: 0.912957
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Ran for 49550 frames Cell Events: 1903 mean_circ: 0.912172
Ran for 50050 frames Cell Events: 1926 mean_circ: 0.912231
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Ran for 60050 frames Cell Events: 2325 mean_circ: 0.911568
Ran for 60550 frames Cell Events: 2357 mean_circ: 0.911531
Ran for 61050 frames Cell Events: 2380 mean_circ: 0.911616
Ran for 62050 frames Cell Events: 2412 mean_circ: 0.91164
Ran for 62550 frames Cell Events: 2424 mean_circ: 0.911719
Ran for 63550 frames Cell Events: 2475 mean_circ: 0.911544
Ran for 64050 frames Cell Events: 2487 mean_circ: 0.911614
Ran for 64550 frames Cell Events: 2504 mean_circ: 0.911426
Ran for 65550 frames Cell Events: 2538 mean_circ: 0.911288
Ran for 66550 frames Cell Events: 2587 mean_circ: 0.911385
Ran for 67050 frames Cell Events: 2608 mean_circ: 0.911428
Ran for 67550 frames Cell Events: 2625 mean_circ: 0.911402
Ran for 68050 frames Cell Events: 2645 mean_circ: 0.911242
Ran for 69050 frames Cell Events: 2657 mean_circ: 0.911234
Ran for 69550 frames Cell Events: 2673 mean_circ: 0.911173
Ran for 70050 frames Cell Events: 2687 mean_circ: 0.911242
Ran for 70550 frames Cell Events: 2703 mean_circ: 0.911049
Ran for 71550 frames Cell Events: 2740 mean_circ: 0.911031
Ran for 72050 frames Cell Events: 2755 mean_circ: 0.911042
Ran for 74050 frames Cell Events: 2838 mean_circ: 0.910868
Ran for 74550 frames Cell Events: 2849 mean_circ: 0.910881
Ran for 75050 frames Cell Events: 2863 mean_circ: 0.910994
Ran for 75550 frames Cell Events: 2878 mean_circ: 0.911055
Ran for 76550 frames Cell Events: 2907 mean_circ: 0.910804
Ran for 77050 frames Cell Events: 2928 mean_circ: 0.910763
Ran for 78050 frames Cell Events: 2942 mean_circ: 0.910826
Ran for 78550 frames Cell Events: 2955 mean_circ: 0.910799
Ran for 79050 frames Cell Events: 2971 mean_circ: 0.910785
Ran for 79550 frames Cell Events: 2991 mean_circ: 0.910768
Ran for 80050 frames Cell Events: 3010 mean_circ: 0.910752
Ran for 80550 frames Cell Events: 3027 mean_circ: 0.910754
Ran for 81050 frames Cell Events: 3041 mean_circ: 0.910819
Ran for 81550 frames Cell Events: 3059 mean_circ: 0.910854
Ran for 82050 frames Cell Events: 3079 mean_circ: 0.910916
Ran for 83550 frames Cell Events: 3146 mean_circ: 0.911172
Ran for 84050 frames Cell Events: 3168 mean_circ: 0.911242
Ran for 84550 frames Cell Events: 3177 mean_circ: 0.911281
Ran for 85050 frames Cell Events: 3193 mean_circ: 0.91127
Ran for 86050 frames Cell Events: 3230 mean_circ: 0.911213
Ran for 86550 frames Cell Events: 3250 mean_circ: 0.911081
Ran for 87050 frames Cell Events: 3268 mean_circ: 0.911129
Ran for 87550 frames Cell Events: 3281 mean_circ: 0.911173
Ran for 88550 frames Cell Events: 3321 mean_circ: 0.911232
Ran for 89050 frames Cell Events: 3335 mean_circ: 0.911236
Ran for 89550 frames Cell Events: 3357 mean_circ: 0.911332
Ran for 90050 frames Cell Events: 3378 mean_circ: 0.911447
Ran for 92050 frames Cell Events: 3473 mean_circ: 0.911426
Ran for 93550 frames Cell Events: 3542 mean_circ: 0.911369
Ran for 94050 frames Cell Events: 3572 mean_circ: 0.911206
Ran for 94550 frames Cell Events: 3589 mean_circ: 0.91125
Ran for 95050 frames Cell Events: 3607 mean_circ: 0.91128
Ran for 95550 frames Cell Events: 3624 mean_circ: 0.911331
Ran for 96050 frames Cell Events: 3635 mean_circ: 0.911282
Ran for 96550 frames Cell Events: 3643 mean_circ: 0.911215
Ran for 97050 frames Cell Events: 3654 mean_circ: 0.911171
Ran for 98050 frames Cell Events: 3688 mean_circ: 0.91119
Ran for 99550 frames Cell Events: 3741 mean_circ: 0.911098
Ran for 100050 frames Cell Events: 3760 mean_circ: 0.911037
Ran for 101050 frames Cell Events: 3804 mean_circ: 0.91091
Ran for 102050 frames Cell Events: 3841 mean_circ: 0.910909
Ran for 102550 frames Cell Events: 3859 mean_circ: 0.910903
Ran for 104050 frames Cell Events: 3925 mean_circ: 0.910743
Ran for 104550 frames Cell Events: 3939 mean_circ: 0.910711
Ran for 105050 frames Cell Events: 3954 mean_circ: 0.910732
Ran for 105550 frames Cell Events: 3965 mean_circ: 0.910768
Ran for 106050 frames Cell Events: 3980 mean_circ: 0.910734
Ran for 106550 frames Cell Events: 3993 mean_circ: 0.910754
Ran for 107050 frames Cell Events: 4007 mean_circ: 0.910732
Ran for 107550 frames Cell Events: 4035 mean_circ: 0.910798
Ran for 108050 frames Cell Events: 4057 mean_circ: 0.910807
Ran for 109050 frames Cell Events: 4086 mean_circ: 0.910752
Ran for 109550 frames Cell Events: 4105 mean_circ: 0.910682
Ran for 110550 frames Cell Events: 4150 mean_circ: 0.910654
Ran for 111050 frames Cell Events: 4165 mean_circ: 0.910728
Ran for 111550 frames Cell Events: 4190 mean_circ: 0.910765
Ran for 113050 frames Cell Events: 4267 mean_circ: 0.910831
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Ran for 114050 frames Cell Events: 4295 mean_circ: 0.910905
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Ran for 115050 frames Cell Events: 4334 mean_circ: 0.910815
Ran for 115550 frames Cell Events: 4354 mean_circ: 0.910786
Ran for 116550 frames Cell Events: 4377 mean_circ: 0.910961
Ran for 117050 frames Cell Events: 4398 mean_circ: 0.910986
Ran for 117550 frames Cell Events: 4411 mean_circ: 0.910963
Ran for 118050 frames Cell Events: 4423 mean_circ: 0.910933
Ran for 119050 frames Cell Events: 4473 mean_circ: 0.910877
Ran for 119550 frames Cell Events: 4491 mean_circ: 0.910894
Ran for 120050 frames Cell Events: 4514 mean_circ: 0.910814
Ran for 121550 frames Cell Events: 4567 mean_circ: 0.910868
Ran for 122550 frames Cell Events: 4609 mean_circ: 0.910832
Ran for 123550 frames Cell Events: 4639 mean_circ: 0.910831
Ran for 124550 frames Cell Events: 4676 mean_circ: 0.910902
Ran for 125550 frames Cell Events: 4705 mean_circ: 0.910979
Ran for 126050 frames Cell Events: 4716 mean_circ: 0.910914
Ran for 126550 frames Cell Events: 4735 mean_circ: 0.910839
Ran for 127050 frames Cell Events: 4750 mean_circ: 0.910878
Ran for 127550 frames Cell Events: 4769 mean_circ: 0.910804
Ran for 128050 frames Cell Events: 4788 mean_circ: 0.910808
Ran for 128550 frames Cell Events: 4803 mean_circ: 0.910806
Ran for 129050 frames Cell Events: 4809 mean_circ: 0.910821
Ran for 129550 frames Cell Events: 4828 mean_circ: 0.910843
Ran for 130050 frames Cell Events: 4839 mean_circ: 0.910902
Ran for 131050 frames Cell Events: 4878 mean_circ: 0.910938
Ran for 131550 frames Cell Events: 4891 mean_circ: 0.910949
Ran for 132050 frames Cell Events: 4912 mean_circ: 0.911
Ran for 132550 frames Cell Events: 4928 mean_circ: 0.910957
Ran for 133050 frames Cell Events: 4940 mean_circ: 0.910946
Ran for 133550 frames Cell Events: 4955 mean_circ: 0.910999
Ran for 134050 frames Cell Events: 4975 mean_circ: 0.911017
Ran for 135550 frames Cell Events: 5040 mean_circ: 0.911211
Ran for 136050 frames Cell Events: 5056 mean_circ: 0.91124
Ran for 137050 frames Cell Events: 5097 mean_circ: 0.911223
Ran for 137550 frames Cell Events: 5110 mean_circ: 0.9112
Ran for 138550 frames Cell Events: 5155 mean_circ: 0.911334
Ran for 139550 frames Cell Events: 5188 mean_circ: 0.911443
Ran for 140050 frames Cell Events: 5200 mean_circ: 0.911422
Ran for 140550 frames Cell Events: 5216 mean_circ: 0.911433
Ran for 141550 frames Cell Events: 5252 mean_circ: 0.911382
Ran for 142050 frames Cell Events: 5273 mean_circ: 0.911396
Ran for 142550 frames Cell Events: 5297 mean_circ: 0.911349
Ran for 143050 frames Cell Events: 5316 mean_circ: 0.911347
Ran for 143550 frames Cell Events: 5329 mean_circ: 0.911357
Ran for 145050 frames Cell Events: 5398 mean_circ: 0.91138
Ran for 145550 frames Cell Events: 5423 mean_circ: 0.911403
Ran for 146550 frames Cell Events: 5455 mean_circ: 0.911377
Ran for 147050 frames Cell Events: 5477 mean_circ: 0.911421
Ran for 147550 frames Cell Events: 5486 mean_circ: 0.911441
Ran for 148050 frames Cell Events: 5516 mean_circ: 0.911438
Ran for 148550 frames Cell Events: 5528 mean_circ: 0.911394
Ran for 149050 frames Cell Events: 5544 mean_circ: 0.911423
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Ran for 150050 frames Cell Events: 5589 mean_circ: 0.911433
Ran for 150550 frames Cell Events: 5599 mean_circ: 0.911484
Ran for 151050 frames Cell Events: 5616 mean_circ: 0.911529
Ran for 152050 frames Cell Events: 5649 mean_circ: 0.911525
Ran for 152550 frames Cell Events: 5669 mean_circ: 0.911553
Ran for 153050 frames Cell Events: 5682 mean_circ: 0.911568
Ran for 153550 frames Cell Events: 5703 mean_circ: 0.911538
Ran for 154050 frames Cell Events: 5726 mean_circ: 0.911581
Ran for 155550 frames Cell Events: 5792 mean_circ: 0.911658
Ran for 156550 frames Cell Events: 5839 mean_circ: 0.911686
Ran for 157050 frames Cell Events: 5850 mean_circ: 0.911704
Ran for 158050 frames Cell Events: 5881 mean_circ: 0.911749
Ran for 158550 frames Cell Events: 5896 mean_circ: 0.911771
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Ran for 160550 frames Cell Events: 6006 mean_circ: 0.911726
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Ran for 163050 frames Cell Events: 6114 mean_circ: 0.91184
Ran for 163550 frames Cell Events: 6128 mean_circ: 0.911885
Ran for 164050 frames Cell Events: 6144 mean_circ: 0.911874
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Ran for 165550 frames Cell Events: 6197 mean_circ: 0.911823
Ran for 166050 frames Cell Events: 6217 mean_circ: 0.911849
Ran for 167550 frames Cell Events: 6284 mean_circ: 0.911966
Ran for 168050 frames Cell Events: 6305 mean_circ: 0.911926
Ran for 169550 frames Cell Events: 6385 mean_circ: 0.911816
Ran for 170050 frames Cell Events: 6400 mean_circ: 0.911854
Ran for 171050 frames Cell Events: 6449 mean_circ: 0.912053
Ran for 171550 frames Cell Events: 6461 mean_circ: 0.912083
Ran for 172050 frames Cell Events: 6473 mean_circ: 0.912053
Ran for 172550 frames Cell Events: 6488 mean_circ: 0.912065
Ran for 174050 frames Cell Events: 6566 mean_circ: 0.912064
Ran for 174550 frames Cell Events: 6589 mean_circ: 0.912077
Ran for 175050 frames Cell Events: 6609 mean_circ: 0.912018
Ran for 175550 frames Cell Events: 6629 mean_circ: 0.91203
Ran for 176050 frames Cell Events: 6641 mean_circ: 0.912038
Ran for 176550 frames Cell Events: 6656 mean_circ: 0.912013
Ran for 177550 frames Cell Events: 6688 mean_circ: 0.912048
Ran for 178050 frames Cell Events: 6706 mean_circ: 0.91203
Ran for 179050 frames Cell Events: 6763 mean_circ: 0.9118
Ran for 180050 frames Cell Events: 6804 mean_circ: 0.911833
Ran for 181050 frames Cell Events: 6845 mean_circ: 0.911764
Ran for 181550 frames Cell Events: 6863 mean_circ: 0.911685
Ran for 182050 frames Cell Events: 6876 mean_circ: 0.911736
Ran for 182550 frames Cell Events: 6889 mean_circ: 0.911769
Ran for 183050 frames Cell Events: 6910 mean_circ: 0.91176
Ran for 184050 frames Cell Events: 6949 mean_circ: 0.911676
Ran for 184550 frames Cell Events: 6960 mean_circ: 0.911683
Ran for 185550 frames Cell Events: 7008 mean_circ: 0.91163
Ran for 186050 frames Cell Events: 7028 mean_circ: 0.911609
Ran for 186550 frames Cell Events: 7048 mean_circ: 0.911583
Ran for 187550 frames Cell Events: 7082 mean_circ: 0.911636
Ran for 189050 frames Cell Events: 7158 mean_circ: 0.911703
Ran for 189550 frames Cell Events: 7182 mean_circ: 0.911627
Ran for 190050 frames Cell Events: 7196 mean_circ: 0.911569
Ran for 190550 frames Cell Events: 7215 mean_circ: 0.911519
Ran for 191050 frames Cell Events: 7233 mean_circ: 0.911499
Ran for 191550 frames Cell Events: 7260 mean_circ: 0.91152
Ran for 192050 frames Cell Events: 7285 mean_circ: 0.911493
Ran for 192550 frames Cell Events: 7303 mean_circ: 0.911507
Ran for 193050 frames Cell Events: 7318 mean_circ: 0.911494
Ran for 193550 frames Cell Events: 7332 mean_circ: 0.911462
Ran for 194050 frames Cell Events: 7344 mean_circ: 0.911483
Ran for 194550 frames Cell Events: 7361 mean_circ: 0.911498
Ran for 195050 frames Cell Events: 7376 mean_circ: 0.911478
Ran for 195550 frames Cell Events: 7401 mean_circ: 0.911476
Ran for 196050 frames Cell Events: 7416 mean_circ: 0.911486
Ran for 196550 frames Cell Events: 7435 mean_circ: 0.911475
Ran for 198050 frames Cell Events: 7499 mean_circ: 0.911551
Ran for 198550 frames Cell Events: 7510 mean_circ: 0.911537
Ran for 199550 frames Cell Events: 7535 mean_circ: 0.911483
Ran for 200050 frames Cell Events: 7559 mean_circ: 0.911468
Ran for 200550 frames Cell Events: 7576 mean_circ: 0.911472
Ran for 201050 frames Cell Events: 7588 mean_circ: 0.911463
Ran for 201550 frames Cell Events: 7606 mean_circ: 0.911405
Ran for 202550 frames Cell Events: 7647 mean_circ: 0.911469
Ran for 203050 frames Cell Events: 7673 mean_circ: 0.911424
Ran for 203550 frames Cell Events: 7703 mean_circ: 0.911437
Ran for 204050 frames Cell Events: 7719 mean_circ: 0.911476
Ran for 204550 frames Cell Events: 7745 mean_circ: 0.9115
Ran for 205550 frames Cell Events: 7795 mean_circ: 0.911489
Ran for 206050 frames Cell Events: 7813 mean_circ: 0.911469
Ran for 206550 frames Cell Events: 7832 mean_circ: 0.911522
Ran for 207050 frames Cell Events: 7849 mean_circ: 0.911482
Ran for 207550 frames Cell Events: 7872 mean_circ: 0.911508
Ran for 208050 frames Cell Events: 7893 mean_circ: 0.911489
Ran for 209550 frames Cell Events: 7963 mean_circ: 0.911459
Ran for 210050 frames Cell Events: 7977 mean_circ: 0.911418
Ran for 210550 frames Cell Events: 7999 mean_circ: 0.911418
Ran for 211550 frames Cell Events: 8025 mean_circ: 0.911387
Ran for 212050 frames Cell Events: 8045 mean_circ: 0.91137
Ran for 213050 frames Cell Events: 8124 mean_circ: 0.911219
Ran for 214550 frames Cell Events: 8185 mean_circ: 0.91121
Ran for 215550 frames Cell Events: 8214 mean_circ: 0.911182
Ran for 216050 frames Cell Events: 8239 mean_circ: 0.911157
Ran for 217050 frames Cell Events: 8281 mean_circ: 0.911205
Ran for 218050 frames Cell Events: 8324 mean_circ: 0.911224
Ran for 218550 frames Cell Events: 8341 mean_circ: 0.911269
Ran for 219050 frames Cell Events: 8367 mean_circ: 0.911284
Ran for 220550 frames Cell Events: 8449 mean_circ: 0.911278
Ran for 221050 frames Cell Events: 8481 mean_circ: 0.911272
Ran for 221550 frames Cell Events: 8507 mean_circ: 0.911297
Ran for 222550 frames Cell Events: 8536 mean_circ: 0.911282
Ran for 223050 frames Cell Events: 8554 mean_circ: 0.911268
Ran for 223550 frames Cell Events: 8570 mean_circ: 0.911224
Ran for 224050 frames Cell Events: 8585 mean_circ: 0.911239
Ran for 225550 frames Cell Events: 8617 mean_circ: 0.911216
Ran for 226550 frames Cell Events: 8654 mean_circ: 0.911216
Ran for 227050 frames Cell Events: 8672 mean_circ: 0.911226
Ran for 228050 frames Cell Events: 8724 mean_circ: 0.911262
Ran for 229550 frames Cell Events: 8785 mean_circ: 0.911167
Ran for 230050 frames Cell Events: 8800 mean_circ: 0.911127
Ran for 230550 frames Cell Events: 8817 mean_circ: 0.911133
Ran for 231050 frames Cell Events: 8835 mean_circ: 0.911175
End this measurment..
Stopping time: 1.32604e+009
****************************************
Measurement finished
Mean Circularitiy: 0.911206
Mean Area: 664.178
Mean FL-1 intensity: 2472.75
Mean FL-2 intensity: 3823.96
Mean FL-3 intensity: 0
frames processed: 229783
Total Time: 115859ms
Number of Runs (new bg img) 0
Frames collected: 231533
Skipped frames: 54437
Rescued Frames: 2679430
Samples DAQ: 57883707
Samples written: 115766284
Samples per Channel: 57883142
FPS: 1998.41
Samples per second: 499601
Expected samples/s: 500000
Events: 8853
Events per second: 76.4119
jumped back (PMT): 10
#Frames read, frequency
# 0 frames :313415
# 1 frames :132531
# 2 frames :4999
# 3 frames :1615
# 4 frames :540
# 5 frames :232
# 6 frames :4275
# 7 frames :1415
# 8 frames :1469
# 9 frames :613
# 10 frames :436
# 11 frames :218
# 12 frames :359
# 13 frames :154
# 14 frames :229
# 15 frames :125
# 16 frames :102
# 17 frames :76
# 18 frames :38
# 19 frames :18
# 20 frames :29
# 21 frames :29
# 22 frames :31
# 23 frames :14
# 24 frames :17
# 25 frames :8
# 26 frames :13
# 27 frames :5
# 28 frames :6
# 29 frames :4
# 30 frames :5
# 31 frames :1
# 32 frames :2
# 33 frames :3
# 34 frames :1
# 35 frames :2
# 36 frames :2
# 39 frames :1
# 49 frames :1
# 67 frames :1
# 91 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.06
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.9599
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 200
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0