Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_11.54.45
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "50fd3c92ab8872c02112d0fa6a2b3c0d",
"name": "M1_20170530_2008_c2_dsRNA_A7_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "09:55:07"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8229 (max 8230) in '8229'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.7873
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.33831e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 6 mean_circ: 0.956318
Ran for 1050 frames Cell Events: 12 mean_circ: 0.956474
Ran for 2550 frames Cell Events: 44 mean_circ: 0.935885
Ran for 3050 frames Cell Events: 48 mean_circ: 0.939967
Ran for 3550 frames Cell Events: 53 mean_circ: 0.936101
Ran for 4050 frames Cell Events: 56 mean_circ: 0.93776
Ran for 4550 frames Cell Events: 66 mean_circ: 0.940208
Ran for 5050 frames Cell Events: 73 mean_circ: 0.940832
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Ran for 6550 frames Cell Events: 98 mean_circ: 0.941034
Ran for 8550 frames Cell Events: 136 mean_circ: 0.943157
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Ran for 64550 frames Cell Events: 1143 mean_circ: 0.943274
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Ran for 66050 frames Cell Events: 1169 mean_circ: 0.943426
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Ran for 67550 frames Cell Events: 1193 mean_circ: 0.943348
Ran for 68050 frames Cell Events: 1201 mean_circ: 0.943413
Ran for 68550 frames Cell Events: 1211 mean_circ: 0.943303
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Ran for 71550 frames Cell Events: 1265 mean_circ: 0.942952
Ran for 72050 frames Cell Events: 1274 mean_circ: 0.942866
Ran for 73050 frames Cell Events: 1290 mean_circ: 0.942913
Ran for 73550 frames Cell Events: 1306 mean_circ: 0.943001
Ran for 74050 frames Cell Events: 1313 mean_circ: 0.942978
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Ran for 75550 frames Cell Events: 1336 mean_circ: 0.943195
Ran for 76550 frames Cell Events: 1351 mean_circ: 0.943327
Ran for 77050 frames Cell Events: 1369 mean_circ: 0.943485
Ran for 77550 frames Cell Events: 1378 mean_circ: 0.943543
Ran for 78550 frames Cell Events: 1398 mean_circ: 0.94363
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Ran for 79550 frames Cell Events: 1416 mean_circ: 0.943645
Ran for 80050 frames Cell Events: 1425 mean_circ: 0.943751
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Ran for 81050 frames Cell Events: 1435 mean_circ: 0.943746
Ran for 82550 frames Cell Events: 1464 mean_circ: 0.943881
Ran for 83050 frames Cell Events: 1474 mean_circ: 0.943753
Ran for 83550 frames Cell Events: 1484 mean_circ: 0.943826
Ran for 84550 frames Cell Events: 1505 mean_circ: 0.943727
Ran for 85550 frames Cell Events: 1528 mean_circ: 0.943657
Ran for 87050 frames Cell Events: 1560 mean_circ: 0.943712
Ran for 87550 frames Cell Events: 1574 mean_circ: 0.943734
Ran for 88050 frames Cell Events: 1583 mean_circ: 0.943687
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Ran for 90550 frames Cell Events: 1641 mean_circ: 0.943516
Ran for 91050 frames Cell Events: 1658 mean_circ: 0.943243
Ran for 92050 frames Cell Events: 1680 mean_circ: 0.943236
Ran for 92550 frames Cell Events: 1688 mean_circ: 0.943173
Ran for 93050 frames Cell Events: 1704 mean_circ: 0.94312
Ran for 93550 frames Cell Events: 1710 mean_circ: 0.943234
Ran for 94050 frames Cell Events: 1718 mean_circ: 0.943272
Ran for 95550 frames Cell Events: 1755 mean_circ: 0.94343
Ran for 96050 frames Cell Events: 1763 mean_circ: 0.943451
Ran for 96550 frames Cell Events: 1783 mean_circ: 0.943346
Ran for 97050 frames Cell Events: 1797 mean_circ: 0.943321
Ran for 97550 frames Cell Events: 1808 mean_circ: 0.943263
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Ran for 102050 frames Cell Events: 1898 mean_circ: 0.943085
Ran for 102550 frames Cell Events: 1912 mean_circ: 0.942969
Ran for 103050 frames Cell Events: 1923 mean_circ: 0.943137
Ran for 105050 frames Cell Events: 1992 mean_circ: 0.943084
Ran for 105550 frames Cell Events: 1999 mean_circ: 0.943067
Ran for 106050 frames Cell Events: 2017 mean_circ: 0.94299
Ran for 107050 frames Cell Events: 2031 mean_circ: 0.942906
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Ran for 110050 frames Cell Events: 2090 mean_circ: 0.942833
Ran for 110550 frames Cell Events: 2101 mean_circ: 0.942795
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Ran for 121550 frames Cell Events: 2350 mean_circ: 0.943067
Ran for 122050 frames Cell Events: 2364 mean_circ: 0.943133
Ran for 122550 frames Cell Events: 2371 mean_circ: 0.943078
Ran for 124050 frames Cell Events: 2407 mean_circ: 0.942937
Ran for 124550 frames Cell Events: 2417 mean_circ: 0.94294
Ran for 125050 frames Cell Events: 2430 mean_circ: 0.942987
Ran for 125550 frames Cell Events: 2443 mean_circ: 0.943047
Ran for 126550 frames Cell Events: 2472 mean_circ: 0.943012
Ran for 127050 frames Cell Events: 2485 mean_circ: 0.943034
Ran for 127550 frames Cell Events: 2501 mean_circ: 0.942997
Ran for 128050 frames Cell Events: 2509 mean_circ: 0.94301
Ran for 128550 frames Cell Events: 2523 mean_circ: 0.943028
Ran for 129050 frames Cell Events: 2528 mean_circ: 0.943016
Ran for 130050 frames Cell Events: 2562 mean_circ: 0.943014
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Ran for 131550 frames Cell Events: 2591 mean_circ: 0.943033
Ran for 132050 frames Cell Events: 2604 mean_circ: 0.943093
Ran for 133550 frames Cell Events: 2633 mean_circ: 0.943262
Ran for 134050 frames Cell Events: 2649 mean_circ: 0.943295
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Ran for 147050 frames Cell Events: 2924 mean_circ: 0.943367
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Ran for 167050 frames Cell Events: 3393 mean_circ: 0.942715
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Ran for 174050 frames Cell Events: 3552 mean_circ: 0.942713
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Ran for 177050 frames Cell Events: 3627 mean_circ: 0.942519
Ran for 177550 frames Cell Events: 3638 mean_circ: 0.942498
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Ran for 178550 frames Cell Events: 3659 mean_circ: 0.942451
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Ran for 180550 frames Cell Events: 3711 mean_circ: 0.942466
Ran for 181050 frames Cell Events: 3720 mean_circ: 0.942517
Ran for 182050 frames Cell Events: 3746 mean_circ: 0.942572
Ran for 182550 frames Cell Events: 3759 mean_circ: 0.94251
Ran for 183050 frames Cell Events: 3775 mean_circ: 0.942529
Ran for 183550 frames Cell Events: 3791 mean_circ: 0.942573
Ran for 184050 frames Cell Events: 3799 mean_circ: 0.942551
Ran for 185050 frames Cell Events: 3819 mean_circ: 0.942557
Ran for 185550 frames Cell Events: 3824 mean_circ: 0.942553
Ran for 186050 frames Cell Events: 3832 mean_circ: 0.942558
Ran for 186550 frames Cell Events: 3840 mean_circ: 0.942549
Ran for 187050 frames Cell Events: 3848 mean_circ: 0.942552
Ran for 188050 frames Cell Events: 3869 mean_circ: 0.942578
Ran for 189050 frames Cell Events: 3887 mean_circ: 0.942592
Ran for 189550 frames Cell Events: 3898 mean_circ: 0.942592
Ran for 190550 frames Cell Events: 3921 mean_circ: 0.942513
Ran for 191050 frames Cell Events: 3927 mean_circ: 0.94247
Ran for 191550 frames Cell Events: 3934 mean_circ: 0.942446
Ran for 192050 frames Cell Events: 3940 mean_circ: 0.942432
Ran for 193550 frames Cell Events: 3970 mean_circ: 0.94237
Ran for 194050 frames Cell Events: 3986 mean_circ: 0.942361
Ran for 195050 frames Cell Events: 4017 mean_circ: 0.942421
Ran for 195550 frames Cell Events: 4038 mean_circ: 0.942406
Ran for 196050 frames Cell Events: 4050 mean_circ: 0.942405
Ran for 196550 frames Cell Events: 4066 mean_circ: 0.942438
Ran for 197050 frames Cell Events: 4071 mean_circ: 0.942491
Ran for 198050 frames Cell Events: 4093 mean_circ: 0.942484
Ran for 199050 frames Cell Events: 4118 mean_circ: 0.942532
Ran for 199550 frames Cell Events: 4130 mean_circ: 0.942526
Ran for 200050 frames Cell Events: 4148 mean_circ: 0.942555
Ran for 201050 frames Cell Events: 4161 mean_circ: 0.942602
Ran for 201550 frames Cell Events: 4178 mean_circ: 0.942627
Ran for 202050 frames Cell Events: 4192 mean_circ: 0.942653
Ran for 202550 frames Cell Events: 4202 mean_circ: 0.942673
Ran for 203050 frames Cell Events: 4209 mean_circ: 0.942675
Ran for 203550 frames Cell Events: 4216 mean_circ: 0.942677
Ran for 204050 frames Cell Events: 4230 mean_circ: 0.942609
Ran for 204550 frames Cell Events: 4244 mean_circ: 0.942615
Ran for 205050 frames Cell Events: 4254 mean_circ: 0.94262
Ran for 205550 frames Cell Events: 4268 mean_circ: 0.942642
Ran for 206050 frames Cell Events: 4280 mean_circ: 0.942654
Ran for 206550 frames Cell Events: 4291 mean_circ: 0.942645
Ran for 207050 frames Cell Events: 4302 mean_circ: 0.942589
Ran for 207550 frames Cell Events: 4316 mean_circ: 0.942551
Ran for 208050 frames Cell Events: 4335 mean_circ: 0.942594
Ran for 210050 frames Cell Events: 4378 mean_circ: 0.942525
Ran for 211550 frames Cell Events: 4432 mean_circ: 0.942434
Ran for 212050 frames Cell Events: 4445 mean_circ: 0.942427
Ran for 213050 frames Cell Events: 4474 mean_circ: 0.94249
Ran for 213550 frames Cell Events: 4479 mean_circ: 0.942484
Ran for 214050 frames Cell Events: 4491 mean_circ: 0.942513
Ran for 214550 frames Cell Events: 4500 mean_circ: 0.942533
Ran for 215050 frames Cell Events: 4514 mean_circ: 0.942524
Ran for 215550 frames Cell Events: 4521 mean_circ: 0.942555
Ran for 216050 frames Cell Events: 4536 mean_circ: 0.9425
Ran for 217050 frames Cell Events: 4555 mean_circ: 0.94249
Ran for 217550 frames Cell Events: 4565 mean_circ: 0.94249
Ran for 218550 frames Cell Events: 4593 mean_circ: 0.942529
Ran for 219550 frames Cell Events: 4618 mean_circ: 0.942521
Ran for 220050 frames Cell Events: 4630 mean_circ: 0.942579
Ran for 220550 frames Cell Events: 4640 mean_circ: 0.942609
Ran for 221050 frames Cell Events: 4652 mean_circ: 0.94257
Ran for 222050 frames Cell Events: 4671 mean_circ: 0.942584
Ran for 222550 frames Cell Events: 4681 mean_circ: 0.942513
Ran for 223050 frames Cell Events: 4691 mean_circ: 0.94251
Ran for 223550 frames Cell Events: 4702 mean_circ: 0.94247
Ran for 224050 frames Cell Events: 4715 mean_circ: 0.942467
Ran for 224550 frames Cell Events: 4726 mean_circ: 0.942486
Ran for 225050 frames Cell Events: 4739 mean_circ: 0.942502
Ran for 225550 frames Cell Events: 4762 mean_circ: 0.942458
Ran for 226050 frames Cell Events: 4774 mean_circ: 0.942433
Ran for 227050 frames Cell Events: 4800 mean_circ: 0.942392
Ran for 227550 frames Cell Events: 4809 mean_circ: 0.942382
Ran for 228550 frames Cell Events: 4833 mean_circ: 0.942349
Ran for 229050 frames Cell Events: 4841 mean_circ: 0.942364
Ran for 229550 frames Cell Events: 4854 mean_circ: 0.942404
Ran for 230050 frames Cell Events: 4868 mean_circ: 0.942423
Ran for 230550 frames Cell Events: 4878 mean_circ: 0.942452
Ran for 231050 frames Cell Events: 4898 mean_circ: 0.942405
Ran for 231550 frames Cell Events: 4914 mean_circ: 0.94243
Ran for 232050 frames Cell Events: 4926 mean_circ: 0.942464
Ran for 232550 frames Cell Events: 4940 mean_circ: 0.942461
Ran for 233050 frames Cell Events: 4952 mean_circ: 0.942448
Ran for 233550 frames Cell Events: 4960 mean_circ: 0.942449
Ran for 234050 frames Cell Events: 4970 mean_circ: 0.942446
Ran for 235050 frames Cell Events: 4993 mean_circ: 0.942385
Ran for 235550 frames Cell Events: 5012 mean_circ: 0.942387
Ran for 236050 frames Cell Events: 5029 mean_circ: 0.942365
Ran for 236550 frames Cell Events: 5040 mean_circ: 0.942391
Ran for 237050 frames Cell Events: 5058 mean_circ: 0.942376
Ran for 238550 frames Cell Events: 5090 mean_circ: 0.942276
Ran for 239050 frames Cell Events: 5108 mean_circ: 0.942244
Ran for 239550 frames Cell Events: 5124 mean_circ: 0.942255
Ran for 240050 frames Cell Events: 5141 mean_circ: 0.942237
Ran for 240550 frames Cell Events: 5158 mean_circ: 0.942253
Ran for 241050 frames Cell Events: 5183 mean_circ: 0.94225
Ran for 241550 frames Cell Events: 5195 mean_circ: 0.942202
Ran for 242050 frames Cell Events: 5208 mean_circ: 0.942234
Ran for 242550 frames Cell Events: 5226 mean_circ: 0.94226
Ran for 243050 frames Cell Events: 5236 mean_circ: 0.942301
Ran for 244050 frames Cell Events: 5271 mean_circ: 0.94229
Ran for 244550 frames Cell Events: 5283 mean_circ: 0.942242
Ran for 245550 frames Cell Events: 5312 mean_circ: 0.942273
Ran for 246050 frames Cell Events: 5323 mean_circ: 0.942242
Ran for 246550 frames Cell Events: 5341 mean_circ: 0.942249
Ran for 247050 frames Cell Events: 5356 mean_circ: 0.942181
Ran for 247550 frames Cell Events: 5367 mean_circ: 0.942135
Ran for 248050 frames Cell Events: 5381 mean_circ: 0.942082
Ran for 248550 frames Cell Events: 5393 mean_circ: 0.942085
Ran for 249050 frames Cell Events: 5411 mean_circ: 0.942053
Ran for 250050 frames Cell Events: 5438 mean_circ: 0.942072
Ran for 250550 frames Cell Events: 5454 mean_circ: 0.942101
Ran for 251550 frames Cell Events: 5482 mean_circ: 0.942078
Ran for 252050 frames Cell Events: 5494 mean_circ: 0.942093
Ran for 252550 frames Cell Events: 5513 mean_circ: 0.942139
Ran for 253050 frames Cell Events: 5525 mean_circ: 0.942187
Ran for 254050 frames Cell Events: 5558 mean_circ: 0.942198
Ran for 254550 frames Cell Events: 5568 mean_circ: 0.942175
Ran for 255050 frames Cell Events: 5585 mean_circ: 0.942161
Ran for 256050 frames Cell Events: 5612 mean_circ: 0.94219
Ran for 256550 frames Cell Events: 5627 mean_circ: 0.942152
Ran for 257050 frames Cell Events: 5641 mean_circ: 0.942128
Ran for 257550 frames Cell Events: 5658 mean_circ: 0.942156
Ran for 258550 frames Cell Events: 5681 mean_circ: 0.942124
Ran for 259550 frames Cell Events: 5705 mean_circ: 0.942138
Ran for 260550 frames Cell Events: 5731 mean_circ: 0.942143
Ran for 261050 frames Cell Events: 5738 mean_circ: 0.942124
Ran for 262050 frames Cell Events: 5756 mean_circ: 0.942126
Ran for 262550 frames Cell Events: 5768 mean_circ: 0.942083
Ran for 263050 frames Cell Events: 5789 mean_circ: 0.942056
Ran for 263550 frames Cell Events: 5798 mean_circ: 0.942043
Ran for 264050 frames Cell Events: 5807 mean_circ: 0.942066
Ran for 264550 frames Cell Events: 5819 mean_circ: 0.942092
Ran for 265050 frames Cell Events: 5830 mean_circ: 0.942093
Ran for 265550 frames Cell Events: 5846 mean_circ: 0.942133
Ran for 266050 frames Cell Events: 5857 mean_circ: 0.942166
Ran for 266550 frames Cell Events: 5869 mean_circ: 0.942153
Ran for 267050 frames Cell Events: 5885 mean_circ: 0.942162
Ran for 267550 frames Cell Events: 5899 mean_circ: 0.942173
Ran for 268050 frames Cell Events: 5912 mean_circ: 0.942156
Ran for 268550 frames Cell Events: 5926 mean_circ: 0.942168
Ran for 269550 frames Cell Events: 5949 mean_circ: 0.942134
Ran for 270550 frames Cell Events: 5977 mean_circ: 0.942152
Ran for 271050 frames Cell Events: 5989 mean_circ: 0.942173
Ran for 271550 frames Cell Events: 5996 mean_circ: 0.94217
Ran for 272050 frames Cell Events: 6003 mean_circ: 0.942184
Ran for 272550 frames Cell Events: 6016 mean_circ: 0.942161
Ran for 273550 frames Cell Events: 6037 mean_circ: 0.942197
Ran for 274050 frames Cell Events: 6050 mean_circ: 0.942199
Ran for 274550 frames Cell Events: 6058 mean_circ: 0.942174
Ran for 275550 frames Cell Events: 6086 mean_circ: 0.94205
Ran for 276550 frames Cell Events: 6116 mean_circ: 0.942062
Ran for 278050 frames Cell Events: 6153 mean_circ: 0.942052
Ran for 279050 frames Cell Events: 6193 mean_circ: 0.942084
Ran for 281050 frames Cell Events: 6234 mean_circ: 0.942066
Ran for 281550 frames Cell Events: 6244 mean_circ: 0.942071
Ran for 284050 frames Cell Events: 6302 mean_circ: 0.94203
Ran for 285550 frames Cell Events: 6352 mean_circ: 0.942008
Ran for 286550 frames Cell Events: 6379 mean_circ: 0.941992
Ran for 287050 frames Cell Events: 6390 mean_circ: 0.94196
Ran for 287550 frames Cell Events: 6403 mean_circ: 0.941916
Ran for 288050 frames Cell Events: 6412 mean_circ: 0.941928
Ran for 289050 frames Cell Events: 6440 mean_circ: 0.941907
Ran for 289550 frames Cell Events: 6442 mean_circ: 0.941905
Ran for 290050 frames Cell Events: 6452 mean_circ: 0.941914
Ran for 292050 frames Cell Events: 6503 mean_circ: 0.941842
Ran for 292550 frames Cell Events: 6517 mean_circ: 0.941824
Ran for 293050 frames Cell Events: 6540 mean_circ: 0.941802
Ran for 293550 frames Cell Events: 6547 mean_circ: 0.941771
Ran for 294050 frames Cell Events: 6558 mean_circ: 0.941786
Ran for 294550 frames Cell Events: 6568 mean_circ: 0.941768
Ran for 295550 frames Cell Events: 6588 mean_circ: 0.941808
Ran for 296050 frames Cell Events: 6598 mean_circ: 0.941823
Ran for 296550 frames Cell Events: 6619 mean_circ: 0.941717
Ran for 297050 frames Cell Events: 6630 mean_circ: 0.941731
Ran for 297550 frames Cell Events: 6642 mean_circ: 0.941744
Ran for 298050 frames Cell Events: 6653 mean_circ: 0.941738
Ran for 298550 frames Cell Events: 6663 mean_circ: 0.941739
Ran for 299550 frames Cell Events: 6694 mean_circ: 0.941725
Ran for 300550 frames Cell Events: 6716 mean_circ: 0.941742
Ran for 301050 frames Cell Events: 6729 mean_circ: 0.941738
Ran for 301550 frames Cell Events: 6735 mean_circ: 0.941748
Ran for 303050 frames Cell Events: 6768 mean_circ: 0.941779
Ran for 303550 frames Cell Events: 6776 mean_circ: 0.941739
Ran for 304050 frames Cell Events: 6784 mean_circ: 0.941751
Ran for 305550 frames Cell Events: 6814 mean_circ: 0.941756
Ran for 306050 frames Cell Events: 6829 mean_circ: 0.941787
Ran for 306550 frames Cell Events: 6842 mean_circ: 0.941812
Ran for 307050 frames Cell Events: 6857 mean_circ: 0.941814
Ran for 308050 frames Cell Events: 6882 mean_circ: 0.94182
Ran for 308550 frames Cell Events: 6897 mean_circ: 0.941799
Ran for 309050 frames Cell Events: 6912 mean_circ: 0.941788
Ran for 309550 frames Cell Events: 6924 mean_circ: 0.941768
Ran for 310050 frames Cell Events: 6947 mean_circ: 0.941765
Ran for 311550 frames Cell Events: 7001 mean_circ: 0.941783
Ran for 312550 frames Cell Events: 7044 mean_circ: 0.94177
Ran for 313550 frames Cell Events: 7072 mean_circ: 0.941776
Ran for 314550 frames Cell Events: 7090 mean_circ: 0.941743
Ran for 315050 frames Cell Events: 7103 mean_circ: 0.941735
Ran for 316050 frames Cell Events: 7137 mean_circ: 0.941803
Ran for 317050 frames Cell Events: 7157 mean_circ: 0.941794
Ran for 317550 frames Cell Events: 7166 mean_circ: 0.941807
Ran for 318550 frames Cell Events: 7199 mean_circ: 0.941801
Ran for 319050 frames Cell Events: 7213 mean_circ: 0.941808
Ran for 320050 frames Cell Events: 7235 mean_circ: 0.941789
Ran for 320550 frames Cell Events: 7245 mean_circ: 0.941783
Ran for 321050 frames Cell Events: 7251 mean_circ: 0.941741
Ran for 321550 frames Cell Events: 7269 mean_circ: 0.941738
Ran for 322050 frames Cell Events: 7277 mean_circ: 0.941755
Ran for 322550 frames Cell Events: 7288 mean_circ: 0.941756
Ran for 323050 frames Cell Events: 7294 mean_circ: 0.941757
Ran for 323550 frames Cell Events: 7304 mean_circ: 0.941742
Ran for 324050 frames Cell Events: 7317 mean_circ: 0.941741
Ran for 324550 frames Cell Events: 7329 mean_circ: 0.941757
Ran for 325050 frames Cell Events: 7346 mean_circ: 0.941725
Ran for 325550 frames Cell Events: 7364 mean_circ: 0.941676
Ran for 326050 frames Cell Events: 7375 mean_circ: 0.941674
Ran for 327050 frames Cell Events: 7388 mean_circ: 0.941675
Ran for 328050 frames Cell Events: 7419 mean_circ: 0.941663
Ran for 328550 frames Cell Events: 7432 mean_circ: 0.94168
Ran for 330050 frames Cell Events: 7464 mean_circ: 0.941674
Ran for 330550 frames Cell Events: 7472 mean_circ: 0.941676
Ran for 331050 frames Cell Events: 7494 mean_circ: 0.941648
Ran for 332050 frames Cell Events: 7518 mean_circ: 0.941583
Ran for 333050 frames Cell Events: 7538 mean_circ: 0.941567
Ran for 333550 frames Cell Events: 7555 mean_circ: 0.94158
Ran for 335550 frames Cell Events: 7623 mean_circ: 0.94152
Ran for 336050 frames Cell Events: 7643 mean_circ: 0.941525
Ran for 336550 frames Cell Events: 7652 mean_circ: 0.941535
Ran for 337550 frames Cell Events: 7668 mean_circ: 0.941494
Ran for 338050 frames Cell Events: 7674 mean_circ: 0.941496
Ran for 339050 frames Cell Events: 7689 mean_circ: 0.941491
Ran for 339550 frames Cell Events: 7699 mean_circ: 0.94151
Ran for 340550 frames Cell Events: 7725 mean_circ: 0.941536
Ran for 341050 frames Cell Events: 7741 mean_circ: 0.941549
Ran for 342050 frames Cell Events: 7763 mean_circ: 0.941556
Ran for 342550 frames Cell Events: 7770 mean_circ: 0.941561
Ran for 343550 frames Cell Events: 7806 mean_circ: 0.941577
Ran for 344550 frames Cell Events: 7837 mean_circ: 0.941482
Ran for 345050 frames Cell Events: 7858 mean_circ: 0.94147
Ran for 346550 frames Cell Events: 7893 mean_circ: 0.941509
Ran for 347550 frames Cell Events: 7923 mean_circ: 0.941507
Ran for 348550 frames Cell Events: 7958 mean_circ: 0.94154
Ran for 349050 frames Cell Events: 7971 mean_circ: 0.941519
Ran for 349550 frames Cell Events: 7983 mean_circ: 0.941532
Ran for 350050 frames Cell Events: 7993 mean_circ: 0.941533
Ran for 351550 frames Cell Events: 8043 mean_circ: 0.941465
Ran for 352050 frames Cell Events: 8055 mean_circ: 0.941466
Ran for 352550 frames Cell Events: 8065 mean_circ: 0.941447
Ran for 353050 frames Cell Events: 8079 mean_circ: 0.941453
Ran for 354050 frames Cell Events: 8104 mean_circ: 0.941397
Ran for 354550 frames Cell Events: 8115 mean_circ: 0.941391
Ran for 355050 frames Cell Events: 8131 mean_circ: 0.941417
Ran for 357050 frames Cell Events: 8186 mean_circ: 0.941422
End this measurment..
Stopping time: 1.33849e+009
****************************************
Measurement finished
Mean Circularitiy: 0.94142
Mean Area: 597.171
Mean FL-1 intensity: 2467.04
Mean FL-2 intensity: 3751.24
Mean FL-3 intensity: 0
frames processed: 357939
Total Time: 179282ms
Number of Runs (new bg img) 0
Frames collected: 358425
Skipped frames: 88852
Rescued Frames: 4249327
Samples DAQ: 89607990
Samples written: 179212398
Samples per Channel: 89606199
FPS: 1999.23
Samples per second: 499807
Expected samples/s: 500000
Events: 8230
Events per second: 45.9054
jumped back (PMT): 4899
#Frames read, frequency
# 0 frames :499222
# 1 frames :195065
# 2 frames :5476
# 3 frames :2782
# 4 frames :1758
# 5 frames :1031
# 6 frames :1020
# 7 frames :1632
# 8 frames :1536
# 9 frames :964
# 10 frames :822
# 11 frames :888
# 12 frames :949
# 13 frames :654
# 14 frames :534
# 15 frames :392
# 16 frames :313
# 17 frames :345
# 18 frames :286
# 19 frames :230
# 20 frames :175
# 21 frames :141
# 22 frames :100
# 23 frames :76
# 24 frames :49
# 25 frames :42
# 26 frames :28
# 27 frames :42
# 28 frames :31
# 29 frames :31
# 30 frames :32
# 31 frames :23
# 32 frames :16
# 33 frames :12
# 34 frames :6
# 35 frames :9
# 36 frames :4
# 37 frames :8
# 38 frames :3
# 39 frames :4
# 40 frames :6
# 41 frames :4
# 42 frames :2
# 43 frames :2
# 44 frames :1
# 45 frames :3
# 46 frames :3
# 47 frames :1
# 48 frames :2
# 49 frames :2
# 50 frames :1
# 52 frames :1
# 53 frames :1
# 54 frames :1
# 56 frames :1
# 61 frames :2
# 68 frames :1
# 81 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 5
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.7873
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 5
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0